Clc06G00560 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G00560
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	t-SNARE coiled-coil homology domain-containing protein
Location	ClcChr06: 477837 .. 483162 (-)
RNA-Seq Expression	Clc06G00560
Synteny	Clc06G00560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGAGGTGTGTGTGGGCCTATATCCTCGGGAGCTCAAATATGACTCTACTATGTGTTGGATGTTGGGCACTTTGGTTAGACAAGACTTTGGTGAATTAGAACTTGTCCATCTCATAAATTGAATCAATTGTTGAATGGATCCTTGGTTTCGTCCAAGAGTTGCAACCGATCAAAGTTGCGCCAAGGGGTTCTGTTAGGTTTTGTGACTCGTGTGTCAAAAAAGGGAAGTGAGAGGTAGAAGTGGGGCGAGCTTGCAGTCTAATCCTGCAAATGAGGATTTTCTAACTCAACATAGATACCTCTTGCTCGTAGTTGTGAACAGTAATATGAGTTGTTTTAAGTGATTATCTCAGCAGGTTGGTATTGGCGCTGACGATTTTTTTGGATTCGTGTGTTAGAGGTGGTGGCAAATGAGGCATTCACTCTGCTTAATGAGTCTTAATGAGCTTCAACTGGATGATGAGATTTTTCTAATTTTTGGGTCAAATATGATTTCCAATTCTTAGTTAATGCAATTCATGCTACCAATTTTCTTAATTATATTTTGGAGAAAATTTGACGAGGAATGATTAAAAAAAACCCATATACTTATTTCATTTTTAATTATATTCATTGGTATATAATTGTGTTGCTCGTAATTTAGCGGATTGCATCATGTCTAATGTTGAGGGGGTACATGGGTGGGCTAAGCCGAGGTATGTTATTAGTTATGATGTTTGAAGTTGTAACCCGTAGATAACCCTCCCAATGTTTTATCTTGGTAATGTATTTATTTGTTTATTTGGCTAAAAAAAAATGCACCATGGCTGAAATTCAAAGGTTAAAAATTAAAAAATCATTTTTCCAATTTTATTTAAATGTCTTTATAAAATAAATGTAAAATTAATAATTACATATTTTGGAGTGATTTTAAAAAGACTAAAACTACTTATGCCATTTTTAAAATCACCAGAAGAAAGATCTTTAATCATTCAAAACTAATTTTGATGATAAAATCATATAAAATTAAATTTTAAATTAATTTTAAGTGATAAAAATTTATATTCATGTTATTAACTATTTTAAAATAATTTTAAAAAAATTTAAAATCCAAAAAGAGATTGGAATTGTCAAGAAACAAAAGCAAAGAGTTTCTCTCTCTTCGAATCCACTGCACAGGTCGTTGCGCGCTCCCGCATCGGTCCCAACATCCATCGGTACGCCCCGTTGCCCTCTCCCTTCACTCCCAACCAGCATTCACCTCTTTCTTCCTCAGATCTACACTCTCCATCGCCCTCACTCTCAGGTTTTCTTCTCCTCTTTCTCCTACATCACTTACAGAATGATTTATTCTGTATTCACGGACATTCGGAACGCCGATTCTCGTTTAGTATCTCGTTCTTGTCCGTCTTTGTTTTGCATTAATCGATTAGCTCCAATTCTAGATCTGGCGTAAGATTTTTTCTTTTAAATCCCGTTTCATGATCTCAGCATGCAATTGAAGTATTATTATTATTATTATTATTTTTACTAATTTTGTGTTTGAATTGGAGTGCTATTTTATGTGCCATCGAGAATGAAATTAAGCTGATTAGAGGGTGTGAGAGTTCTCTTCTTCTTTCGTTTTATTGGCCGCGGACGGATTATTGATTTCTGGAAGTGATCGTGTTAGTTTTCAAGCATTGCAGTTGAAGATGCCATCGGCTCAAGATCCGTTCTATGTTGTAAAAGACGAGATTCAAGAATCTGTAAGTTGGTTGCTTGCATCCAGTTATGATTATCCATGGTGATTGGATTATGCTCACCGACGTGATTTAAATTAAGCTCATTTGAACTGTAATTTCTTTTTCTGCAATATTGAATTGGTTGTTAGAAGAAAAGGAGTTTGAATTAGAACAGGGAAACTGGAGAGTGGAAATAGCGATCAGGTTTGCAGCTATATTCGCTTGCTGCAAAATGAACCAATATCAACAAACGAGACATAGTGAGTTATTATACAAAAAATATGAAAATATAAAGACACGGATTGTGGATTGTGGATACGGAATGCACATTAAATTAGTTTACCTTTAGCAACTGTCAGTGATTGTATTTTTCAGTAGTGAATAAATATGACTGCTGTTAACCGAACCTTCTCCTTTCCCGAGATGACACTTGATGGGATCTTCTTATCTCCCAAAATCTATCTTGTCCTCTGTATCTTGTATTTCTGTCTATACCAATATTCTCTGTGAGATAACCATCAGCCAAGAATACAACGTTCCACCACAAAAGTTCATCTTGAAGTTCAAATTGTAAATAGTCAAACATGGCATCTCAATAACCAGCATTCCTTGAAGTGGGATTTTAGTTATAGTAGACTTCATGAAGTACATTGTTTTTCTTCTCTAAAAAAAATGAAGTAGATTGTTTGAAGGTCTGATTATGCTTTATTGTCGAAAATAATTGAATGTCTCATTAATAAGCATGCTCTACATTTCTTGATTAAATATTGATGAATGAATATTTCTAGTTCCTGATGAAAGTATTATTGGATTCCTAAAACATAAATAAATATATAAAGGATTGTCAGATATTCGCGATCCAATTTCTTTGACTCCAAATTATGAATCATAAAGGTAAAAACTAATGTTGGAAGTTCGCTGACTTGGTTCTGACTTCCCTAGAGTGATTTACATTGGTGCTTCCTACTTTACAAAAGCTATTTCTAGGAAAAATTCTAGTACTATGGCTGTATGAAAATAATTTATGTGGCTGGTAATAACATTTAGTGTTCAAAGTCAATGTTGATTTTCTGCCACTTTGTTCGGCTACATGTGCTTTTTCTCATAATGTGATTTTTCCATCTCTATCAGATTGATAAACTGCAATCCAGCTTTCACCAATGGGAAAGGATATCTTCTGATTCAGGAGAGAGAATACAACAAACAAAAGAGTTGCTTGCTTCTTGTGAAAGCATTGAATGGCAGGTAAATTCTCAATTTCTAAATCATGTTGTCTGCTTCTTTTATCTGTTATGAAACTTTTTCTTTTTTCTTTTTGATTTTTATTTTATCAAAAAGATTGGACATCATTTGTTCTGGGGTTTCAATGTGTGACTAAGCATTGTACACGATTCAATATGTGTTTTCTCTGAAAGTCTGCTTTCTTGATAGGAAGGTGGACGAGTTGGACAAAGCTATTGCTGTGGCAGCTAGAGATCCATCTTGGTATGGCATTGATGATGCAGAACTTGAAAAACGAAGGAGATGGACGAGTACTGCTAGAACACAGGTATTACTTGTCTGACCCTCTTTTATTTTGCGTCAATAGATAGAATAGAGTAATAAACAAGTTTATAATTCTTGTTTTTTCCATATAGTTATTGCACGCGCTTCTTGTAGTCCTGCCATTATAGCACTGAAGTTTGTTTTCAAATATGTCATGGAATTTCTTTGTTCAAAGCCATTATAAATACTCAAAATATTCAAGTAAAATGTCCATTTCTTCTAAATAGCTTGAACAGACAGAGCATATTTTATGTATTTATGTTTGCTTGGTTTACTTTACTAGGTTGGAAATGTTAAGAAAGTAGTAGGAGCTGGGAAGGAGCAAACGGGAACTGCTAGTGCAAGTGGGATGCGTCGAGAATTGATGAGACTACCTAATGCACATGAAACAGACAGATCAAACTTATATACAGCCAACCAAGCAAATGATGACTTCATCACATCCGAATCAGATAGACAGCTGCTTCTAATAAAGTAATGTTTATATTTCTCAACTCGGCTGTTAACTTAATCCTCCTGCTTAAGTAGAAACCTATCTCTAAATTAAGCATGTTACAAAAATGACAGAATAAAATGAGAGATGTCATTGTTCGTTTTCAGTTTTCCATCCCAAACCTGGGGCTATCTCTGAGGGAATTAGTCTTACATTTATGTGGAGTAGAGTACTTGTTAACTCACCTGGATTTTGTTCCCCTGTCAAACGTATATATAGGCAGCAGGACGAGGAGTTGGATGAGTTGAGTGCAAGCGTGGAGAGAATTGGAGGTGTTGGGCTTACAATACATGAAGAGCTCCTTGCACAGGTGCATATTTCGTAGGTTGCAGTGTTGCCTATTGGTTCTCTCTGTGCATCTGCAATCTGATGGAATTTTTTAGGCTAAAAAAAAATCGTTCTGTGCAGGATAAAATTATCGACGACCTAGGAATGGAAATGGACAGTACATCAAATCGTCTTGATTTTGTTCAGGTGTGTTTATGATTTCAATGTTCGCCATATGCACGAAAATTAGCTTCAGGTTCACAGTAATAAGATTCTGATATTCTGAAGATGTTAGCGATAATCAATGGATTTTTCTTTGTTTTTTGGTTTAAATCTCATTTTAGTCCACATCCCTCAACTGTTGAGCTTGTTCTGTTTTTGTTCCTAGACTTTCAAAATGTTCATTGTCGTCGTTGAACTTTCAAATTTGTTCTATTTAGGTCTCTAAATTTTCAAATTTGTTTATTTAGGTCCCTAAGCTTTCAAGTTTGTTCTATTTTGGTTTTTGAACTTTAAAAAATATTCATTTTGGTTATTGCATTTTTTTTTTTTATAACAAATTATTGACATAGTTTTGAGTATGTGTGAGATTTCAAGCGATATAAGTTAGAAACAAGCATTTGACAAGTGAATATAGGATAGAAAATAATATAGCAAGGATGAAAATGATTATTATTTTGAAATTCAGAGACTAAAATAGACATTTTGAATGTTTTTAGGGACTAAAATAGAACCCACTCGAAAGTTTTGGTAATCAAACTGGTATTTATACCCCCTTTTTTGTGGTTAAGAGAAGTAAATACAAGATTTAAACTTCTATCTTCTGTTCTTATATTCACCATACAGAAAAAAGTAGCAGTGGTCATGAAGAAGGCCAGCGCCAAGGGGCAGATAATGATGATATTGTTCTTGGTGGCTCTGTTCATCATCCTTTTTGTGTTGGTGTTCCTCACCTAGCCTTTTGTCGGCAAAAGCCAGGCCCCATCCAGCCATACTCACATCAGAAAACGGATTCAGATAATTAGGAATACGGACAAGTATTGTTGAAACCATCCTGAAATTTTGAACTGAGAACTACAAATGGGTCCTTCATGTACTTATAAGAGTTAATAAGAATTCCAGAACCTAGCTTCTATATTACAAAATGCAATGTGAAACTTGTTTTCACTAATTCATTATTTGTACTTGTTTGCTACTTAGATTCCAGCCTTTTATTTGTTTTGAAGTTTCTTTGGTAGAGTTGGTATACCATAATTTCATGTAATTATAAAGCTTTACAGATTTATGATAGATTGAACAATTGCTACTTCTTTA

mRNA sequence

ATGAAAGAGATTGGAATTGTCAAGAAACAAAAGCAAAGAGTTTCTCTCTCTTCGAATCCACTGCACAGGTCGTTGCGCGCTCCCGCATCGGTCCCAACATCCATCGGTACGCCCCGTTGCCCTCTCCCTTCACTCCCAACCAGCATTCACCTCTTTCTTCCTCAGATCTACACTCTCCATCGCCCTCACTCTCAGGTTTTCTTCTCCTCTTTCTCCTACATCACTTACAGAATGATTTATTCTGTATTCACGGACATTCGGAACGCCGATTCTCGTTTATTGAAGATGCCATCGGCTCAAGATCCGTTCTATGTTGTAAAAGACGAGATTCAAGAATCTGAGTTTGAATTAGAACAGGGAAACTGGAGAGTGGAAATAGCGATCAGATTGATAAACTGCAATCCAGCTTTCACCAATGGGAAAGGATATCTTCTGATTCAGGAGAGAGAATACAACAAACAAAAGAGTTGCTTGCTTCTTGTGAAAGCATTGAATGGCAGGAAGGTGGACGAGTTGGACAAAGCTATTGCTGTGGCAGCTAGAGATCCATCTTGGTATGGCATTGATGATGCAGAACTTGAAAAACGAAGGAGATGGACGAGTACTGCTAGAACACAGTCCTGCCATTATAGCACTGAAGTTTGTTTTCAAATATGTCATGGAATTTCTTTGTTCAAAGCCATTATAAATACTCAAAATATTCAAGTAAAATGTCCATTTCTTCTAAATAGCTTGAACAGACAGAGCATATTTTATGTTGGAAATGTTAAGAAAGTAGTAGGAGCTGGGAAGGAGCAAACGGGAACTGCTAGTGCAAGTGGGATGCGTCGAGAATTGATGAGACTACCTAATGCACATGAAACAGACAGATCAAACTTATATACAGCCAACCAAGCAAATGATGACTTCATCACATCCGAATCAGATAGACAGCTGCTTCTAATAAAGCAGCAGGACGAGGAGTTGGATGAGTTGAGTGCAAGCGTGGAGAGAATTGGAGGTGTTGGGCTTACAATACATGAAGAGCTCCTTGCACAGGATAAAATTATCGACGACCTAGGAATGGAAATGGACAGTACATCAAATCGTCTTGATTTTGTTCAGAAAAAAGTAGCAGTGGTCATGAAGAAGGCCAGCGCCAAGGGGCAGATAATGATGATATTGTTCTTGGTGGCTCTGTTCATCATCCTTTTTGTGTTGGTGTTCCTCACCTAGCCTTTTGTCGGCAAAAGCCAGGCCCCATCCAGCCATACTCACATCAGAAAACGGATTCAGATAATTAGGAATACGGACAAGTATTGTTGAAACCATCCTGAAATTTTGAACTGAGAACTACAAATGGGTCCTTCATGTACTTATAAGAGTTAATAAGAATTCCAGAACCTAGCTTCTATATTACAAAATGCAATGTGAAACTTGTTTTCACTAATTCATTATTTGTACTTGTTTGCTACTTAGATTCCAGCCTTTTATTTGTTTTGAAGTTTCTTTGGTAGAGTTGGTATACCATAATTTCATGTAATTATAAAGCTTTACAGATTTATGATAGATTGAACAATTGCTACTTCTTTA

Coding sequence (CDS)

ATGAAAGAGATTGGAATTGTCAAGAAACAAAAGCAAAGAGTTTCTCTCTCTTCGAATCCACTGCACAGGTCGTTGCGCGCTCCCGCATCGGTCCCAACATCCATCGGTACGCCCCGTTGCCCTCTCCCTTCACTCCCAACCAGCATTCACCTCTTTCTTCCTCAGATCTACACTCTCCATCGCCCTCACTCTCAGGTTTTCTTCTCCTCTTTCTCCTACATCACTTACAGAATGATTTATTCTGTATTCACGGACATTCGGAACGCCGATTCTCGTTTATTGAAGATGCCATCGGCTCAAGATCCGTTCTATGTTGTAAAAGACGAGATTCAAGAATCTGAGTTTGAATTAGAACAGGGAAACTGGAGAGTGGAAATAGCGATCAGATTGATAAACTGCAATCCAGCTTTCACCAATGGGAAAGGATATCTTCTGATTCAGGAGAGAGAATACAACAAACAAAAGAGTTGCTTGCTTCTTGTGAAAGCATTGAATGGCAGGAAGGTGGACGAGTTGGACAAAGCTATTGCTGTGGCAGCTAGAGATCCATCTTGGTATGGCATTGATGATGCAGAACTTGAAAAACGAAGGAGATGGACGAGTACTGCTAGAACACAGTCCTGCCATTATAGCACTGAAGTTTGTTTTCAAATATGTCATGGAATTTCTTTGTTCAAAGCCATTATAAATACTCAAAATATTCAAGTAAAATGTCCATTTCTTCTAAATAGCTTGAACAGACAGAGCATATTTTATGTTGGAAATGTTAAGAAAGTAGTAGGAGCTGGGAAGGAGCAAACGGGAACTGCTAGTGCAAGTGGGATGCGTCGAGAATTGATGAGACTACCTAATGCACATGAAACAGACAGATCAAACTTATATACAGCCAACCAAGCAAATGATGACTTCATCACATCCGAATCAGATAGACAGCTGCTTCTAATAAAGCAGCAGGACGAGGAGTTGGATGAGTTGAGTGCAAGCGTGGAGAGAATTGGAGGTGTTGGGCTTACAATACATGAAGAGCTCCTTGCACAGGATAAAATTATCGACGACCTAGGAATGGAAATGGACAGTACATCAAATCGTCTTGATTTTGTTCAGAAAAAAGTAGCAGTGGTCATGAAGAAGGCCAGCGCCAAGGGGCAGATAATGATGATATTGTTCTTGGTGGCTCTGTTCATCATCCTTTTTGTGTTGGTGTTCCTCACCTAG

Protein sequence

MKEIGIVKKQKQRVSLSSNPLHRSLRAPASVPTSIGTPRCPLPSLPTSIHLFLPQIYTLHRPHSQVFFSSFSYITYRMIYSVFTDIRNADSRLLKMPSAQDPFYVVKDEIQESEFELEQGNWRVEIAIRLINCNPAFTNGKGYLLIQEREYNKQKSCLLLVKALNGRKVDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQSCHYSTEVCFQICHGISLFKAIINTQNIQVKCPFLLNSLNRQSIFYVGNVKKVVGAGKEQTGTASASGMRRELMRLPNAHETDRSNLYTANQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFIILFVLVFLT

Homology

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BLAST of Clc06G00560 vs. NCBI nr
Match: XP_038906665.1 (syntaxin-61 [Benincasa hispida])

HSP 1 Score: 349.0 bits (894), Expect = 5.6e-92
Identity = 213/309 (68.93%), Postives = 224/309 (72.49%), Query Frame = 0


Query: 96  MPSAQDPFYVVKDEIQESEFELEQGNWRVEIAIRLINCNPAFTNGKGYLLIQEREYNKQK 155
           MPSAQDPFYVVKDEIQES  +L+    + E     I+ +P                 + K
Sbjct: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWE----RISSDPG------------ERVQQTK 60

Query: 156 SCLLLVKALNGRKVDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQSCHYSTEVC 215
             L   +++   +VDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQ         
Sbjct: 61  ELLASCESIEW-QVDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQ--------- 120

Query: 216 FQICHGISLFKAIINTQNIQVKCPFLLNSLNRQSIFYVGNVKKVVGAGKEQTGTASASGM 275
                                                VGNVKKVVGAGKEQTGTASASGM
Sbjct: 121 -------------------------------------VGNVKKVVGAGKEQTGTASASGM 180

Query: 276 RRELMRLPNAHETDRSNLYTANQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV 335
           RRELMRLPNAHETDRSNLYTA+QANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV
Sbjct: 181 RRELMRLPNAHETDRSNLYTAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV 240

Query: 336 GLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFI 395
           GLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFI
Sbjct: 241 GLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFI 246

Query: 396 ILFVLVFLT 405
           ILFVLVFLT
Sbjct: 301 ILFVLVFLT 246

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BLAST of Clc06G00560 vs. NCBI nr
Match: XP_008460099.1 (PREDICTED: syntaxin-61 [Cucumis melo])

HSP 1 Score: 345.9 bits (886), Expect = 4.7e-91
Identity = 213/309 (68.93%), Postives = 222/309 (71.84%), Query Frame = 0


Query: 96  MPSAQDPFYVVKDEIQESEFELEQGNWRVEIAIRLINCNPAFTNGKGYLLIQEREYNKQK 155
           MPSAQDPFYVVKDEIQES  +L+    + E            ++  G  + Q +E     
Sbjct: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWE----------RISSDSGERVQQTKE----- 60

Query: 156 SCLLLVKALNGRKVDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQSCHYSTEVC 215
             LL        +VDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQ         
Sbjct: 61  --LLASCESIEWQVDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQ--------- 120

Query: 216 FQICHGISLFKAIINTQNIQVKCPFLLNSLNRQSIFYVGNVKKVVGAGKEQTGTASASGM 275
                                                VGNVKKVVGAGKEQTG ASASGM
Sbjct: 121 -------------------------------------VGNVKKVVGAGKEQTGIASASGM 180

Query: 276 RRELMRLPNAHETDRSNLYTANQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV 335
           RRELMRLPNAHETDRSNLYTA+QANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV
Sbjct: 181 RRELMRLPNAHETDRSNLYTAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV 240

Query: 336 GLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFI 395
           GLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFI
Sbjct: 241 GLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFI 246

Query: 396 ILFVLVFLT 405
           ILFVLVFLT
Sbjct: 301 ILFVLVFLT 246

[Close]

BLAST of Clc06G00560 vs. NCBI nr
Match: KAG6574801.1 (Syntaxin-61, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 342.8 bits (878), Expect = 4.0e-90
Identity = 221/363 (60.88%), Postives = 236/363 (65.01%), Query Frame = 0


Query: 39  RCPLPSLPTSIHLFLPQIYTLHRPHSQVFFSSFSYITYRMIYSVFTDIRNADSRLLKMPS 98
           RC LPS P SI  FL QIYTLHRPHSQ                            L MPS
Sbjct: 27  RCALPS-PASIQQFLHQIYTLHRPHSQ----------------------------LNMPS 86

Query: 99  AQDPFYVVKDEIQESEFELEQGNWRVEIAIRLINCNPAFTNGKGYLLIQEREYNKQKSCL 158
           AQDPFYVVKDEIQES  +++    + E     I+ +P              E  +Q   L
Sbjct: 87  AQDPFYVVKDEIQESIDKVQSSFHQWE----RISSDPG-------------ERAQQTKEL 146

Query: 159 LLVKALNGRKVDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQSCHYSTEVCFQI 218
           L        +VDELDKAIAVAARDPSWYGID AELEKRRRWTSTAR Q            
Sbjct: 147 LASCESIEWQVDELDKAIAVAARDPSWYGIDHAELEKRRRWTSTARMQ------------ 206

Query: 219 CHGISLFKAIINTQNIQVKCPFLLNSLNRQSIFYVGNVKKVVGAGKEQTGTASASGMRRE 278
                                             VGNVKKVVGAGKEQTGTA ASGMRRE
Sbjct: 207 ----------------------------------VGNVKKVVGAGKEQTGTAGASGMRRE 266

Query: 279 LMRLPNAHETDRSNLYTANQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLT 338
           LMRLPNA ET++SNLYTA+Q NDDFI+SESDRQLLLI+QQDEELDELSASV RIGGVGLT
Sbjct: 267 LMRLPNALETEKSNLYTAHQENDDFISSESDRQLLLIRQQDEELDELSASVVRIGGVGLT 297

Query: 339 IHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFIILF 398
           IHEELLAQDKIID+LGMEMDSTSNRLDFVQKKVAVVMKKASAKGQ+MMILFLVALFIILF
Sbjct: 327 IHEELLAQDKIIDNLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQMMMILFLVALFIILF 297

Query: 399 VLV 402
           VLV
Sbjct: 387 VLV 297

[Close]

BLAST of Clc06G00560 vs. NCBI nr
Match: XP_004154296.1 (syntaxin-61 [Cucumis sativus] >XP_031742420.1 syntaxin-61 [Cucumis sativus] >KAE8646703.1 hypothetical protein Csa_005407 [Cucumis sativus])

HSP 1 Score: 342.4 bits (877), Expect = 5.2e-90
Identity = 211/309 (68.28%), Postives = 222/309 (71.84%), Query Frame = 0


Query: 96  MPSAQDPFYVVKDEIQESEFELEQGNWRVEIAIRLINCNPAFTNGKGYLLIQEREYNKQK 155
           MPSAQDPFYVVKDEIQES  +L+    + E            ++  G  + Q +E     
Sbjct: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWE----------RISSDSGERVQQTKE----- 60

Query: 156 SCLLLVKALNGRKVDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQSCHYSTEVC 215
             LL        +VDELDKAIAVAARDPSWYGID+AELEKRRRWTSTARTQ         
Sbjct: 61  --LLASCESIEWQVDELDKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQ--------- 120

Query: 216 FQICHGISLFKAIINTQNIQVKCPFLLNSLNRQSIFYVGNVKKVVGAGKEQTGTASASGM 275
                                                VGNVKKVVGAGKEQ GTASASGM
Sbjct: 121 -------------------------------------VGNVKKVVGAGKEQIGTASASGM 180

Query: 276 RRELMRLPNAHETDRSNLYTANQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV 335
           RRELMRLPNAHETDRSNLY+A+QANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV
Sbjct: 181 RRELMRLPNAHETDRSNLYSAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV 240

Query: 336 GLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFI 395
           GLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFI
Sbjct: 241 GLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFI 246

Query: 396 ILFVLVFLT 405
           ILFVLVFLT
Sbjct: 301 ILFVLVFLT 246

[Close]

BLAST of Clc06G00560 vs. NCBI nr
Match: XP_022139529.1 (syntaxin-61 [Momordica charantia] >XP_022139530.1 syntaxin-61 [Momordica charantia])

HSP 1 Score: 335.5 bits (859), Expect = 6.4e-88
Identity = 208/309 (67.31%), Postives = 221/309 (71.52%), Query Frame = 0


Query: 96  MPSAQDPFYVVKDEIQESEFELEQGNWRVEIAIRLINCNPAFTNGKGYLLIQEREYNKQK 155
           MPSAQDPFYVVKDEIQES  +L+    + E     I+ +P    G+   L +E       
Sbjct: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWE----RISSDP----GERVQLTKE------- 60

Query: 156 SCLLLVKALNGRKVDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQSCHYSTEVC 215
             LL        +VDELDKAIAVAARDPSWYGIDD ELEKRRRWTSTARTQ         
Sbjct: 61  --LLAACESIEWQVDELDKAIAVAARDPSWYGIDDLELEKRRRWTSTARTQ--------- 120

Query: 216 FQICHGISLFKAIINTQNIQVKCPFLLNSLNRQSIFYVGNVKKVVGAGKEQTGTASASGM 275
                                                VGNVKKVVGAGKEQTG ASA+GM
Sbjct: 121 -------------------------------------VGNVKKVVGAGKEQTGPASANGM 180

Query: 276 RRELMRLPNAHETDRSNLYTANQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV 335
           RRELMRLPN H+TDRSNLYT +QANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV
Sbjct: 181 RRELMRLPNPHDTDRSNLYTPHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV 240

Query: 336 GLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFI 395
           GLTIHEELLAQDKIID+LGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFL+ALFI
Sbjct: 241 GLTIHEELLAQDKIIDELGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLLALFI 246

Query: 396 ILFVLVFLT 405
           ILFVLVFLT
Sbjct: 301 ILFVLVFLT 246

[Close]

BLAST of Clc06G00560 vs. ExPASy Swiss-Prot
Match: Q946Y7 (Syntaxin-61 OS=Arabidopsis thaliana OX=3702 GN=SYP61 PE=1 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.4e-61
Identity = 155/309 (50.16%), Postives = 191/309 (61.81%), Query Frame = 0


Query: 96  MPSAQDPFYVVKDEIQESEFELEQGNWRVEIAIRLINCNPAFTNGKGYLLIQEREYNKQK 155
           M SAQDPFY+VK+EIQ+S  +L+    + E        +P   +          + +  K
Sbjct: 1   MSSAQDPFYIVKEEIQDSIDKLQSTFHKWE------RISPDMGD----------QAHVAK 60

Query: 156 SCLLLVKALNGRKVDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQSCHYSTEVC 215
             +    ++   +VDEL+KAI VAA+DPSWYGID+AELEKRRRWTS ARTQ         
Sbjct: 61  ELVATCGSIEW-QVDELEKAITVAAKDPSWYGIDEAELEKRRRWTSNARTQ--------- 120

Query: 216 FQICHGISLFKAIINTQNIQVKCPFLLNSLNRQSIFYVGNVKKVVGAGKEQTGTASASGM 275
                                                V NVK  V AGK  +G   AS +
Sbjct: 121 -------------------------------------VRNVKSGVLAGKVSSGAGHASEV 180

Query: 276 RRELMRLPNAHETDRSNLYTANQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV 335
           RRELMR+PN+ E  R + Y   + +D F+ SESDRQ+LLIKQQDEELDELS SV+RIGGV
Sbjct: 181 RRELMRMPNSGEASRYDQY-GGRDDDGFVQSESDRQMLLIKQQDEELDELSKSVQRIGGV 240

Query: 336 GLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFI 395
           GLTIH+EL+AQ++IID+L  EMDST NRL+FVQKKV +VMKKA AKGQ+MMI FL+ LFI
Sbjct: 241 GLTIHDELVAQERIIDELDTEMDSTKNRLEFVQKKVGMVMKKAGAKGQMMMICFLLVLFI 245

Query: 396 ILFVLVFLT 405
           ILFVLVFLT
Sbjct: 301 ILFVLVFLT 245

[Close]

BLAST of Clc06G00560 vs. ExPASy Swiss-Prot
Match: O43752 (Syntaxin-6 OS=Homo sapiens OX=9606 GN=STX6 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.4e-08
Identity = 77/306 (25.16%), Postives = 139/306 (45.42%), Query Frame = 0


Query: 98  SAQDPFYVVKDEIQESEFELEQGNWRVEIAIRLINCNPAFTNGKGYLLIQEREY--NKQK 157
           S +DPF+VVK E+Q++          V  A  L                +E ++  N+ +
Sbjct: 2   SMEDPFFVVKGEVQKA----------VNTAQGLFQRWTELLQDPSTATREEIDWTTNELR 61

Query: 158 SCLLLVKALNGRKVDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQSCHYSTEVC 217
           + L  ++      +++LD+ I++   +P  + +D  EL  R+ + ++ R           
Sbjct: 62  NNLRSIE----WDLEDLDETISIVEANPRKFNLDATELSIRKAFITSTR----------- 121

Query: 218 FQICHGISLFKAIINTQNIQVKCPFLLNSLNRQSIFYVGNVKKVVGAGKEQTGTASASG- 277
            Q+   +   K  ++T ++Q     L    NRQ++  +G+     G+    TGT    G 
Sbjct: 122 -QVVRDM---KDQMSTSSVQA----LAERKNRQAL--LGD----SGSQNWSTGTTDKYGR 181

Query: 278 MRRELMRLPNAHETDRSNLYTANQANDDFITSESDRQLLLIKQQDEELDELSASVERIGG 337
           + REL R                 AN  FI  +  +Q L+++QQDE+L+ +S S+  +  
Sbjct: 182 LDRELQR-----------------ANSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVLKN 241

Query: 338 VGLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALF 397
           +   I  EL  Q  +++D   E++ST +RLD V KK+A V    S + Q   I  L A+ 
Sbjct: 242 MSQRIGGELEEQAVMLEDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWCAIAILFAVL 251

Query: 398 IILFVL 401
           +++ +L
Sbjct: 302 LVVLIL 251

[Close]

BLAST of Clc06G00560 vs. ExPASy Swiss-Prot
Match: Q5R6Q2 (Syntaxin-6 OS=Pongo abelii OX=9601 GN=STX6 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.4e-08
Identity = 77/306 (25.16%), Postives = 139/306 (45.42%), Query Frame = 0


Query: 98  SAQDPFYVVKDEIQESEFELEQGNWRVEIAIRLINCNPAFTNGKGYLLIQEREY--NKQK 157
           S +DPF+VVK E+Q++          V  A  L                +E ++  N+ +
Sbjct: 2   SMEDPFFVVKGEVQKA----------VNTAQGLFQRWTELLQDPSTATREEIDWTTNELR 61

Query: 158 SCLLLVKALNGRKVDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQSCHYSTEVC 217
           + L  ++      +++LD+ I++   +P  + +D  EL  R+ + ++ R           
Sbjct: 62  NNLRSIE----WDLEDLDETISIVEANPRKFNLDATELSIRKAFITSTR----------- 121

Query: 218 FQICHGISLFKAIINTQNIQVKCPFLLNSLNRQSIFYVGNVKKVVGAGKEQTGTASASG- 277
            Q+   +   K  ++T ++Q     L    NRQ++  +G+     G+    TGT    G 
Sbjct: 122 -QVVRDM---KDQMSTSSVQA----LAERKNRQAL--LGD----SGSQNWSTGTTDKYGR 181

Query: 278 MRRELMRLPNAHETDRSNLYTANQANDDFITSESDRQLLLIKQQDEELDELSASVERIGG 337
           + REL R                 AN  FI  +  +Q L+++QQDE+L+ +S S+  +  
Sbjct: 182 LDRELQR-----------------ANSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVLKN 241

Query: 338 VGLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALF 397
           +   I  EL  Q  +++D   E++ST +RLD V KK+A V    S + Q   I  L A+ 
Sbjct: 242 MSQRIGGELEEQAVMLEDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWCAIAILFAVL 251

Query: 398 IILFVL 401
           +++ +L
Sbjct: 302 LVVLIL 251

[Close]

BLAST of Clc06G00560 vs. ExPASy Swiss-Prot
Match: Q9JKK1 (Syntaxin-6 OS=Mus musculus OX=10090 GN=Stx6 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.8e-08
Identity = 75/308 (24.35%), Postives = 136/308 (44.16%), Query Frame = 0


Query: 98  SAQDPFYVVKDEIQESEFELEQGNWRVEIAIRLINCNPAFTNGKGYLLIQEREY--NKQK 157
           S +DPF+VVK E+Q++          V  A  L         G      +E ++  N+ +
Sbjct: 2   SMEDPFFVVKGEVQKA----------VNTAQGLFQRWTELLQGPSAATREEIDWTTNELR 61

Query: 158 SCLLLVKALNGRKVDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQSCHYSTEVC 217
           + L  ++      +++LD+ I++   +P  + +D  EL  R+ + ++ R           
Sbjct: 62  NNLRSIE----WDLEDLDETISIVEANPRKFNLDATELSIRKAFITSTR----------- 121

Query: 218 FQICHGISLFKAIINTQNIQVKCPFLLNSLNRQSIFYVGNVKKVVGAGKEQT---GTASA 277
            QI   +   K  ++  ++Q     L    NRQ++         +G    Q+   G A  
Sbjct: 122 -QIVRDM---KDQMSASSVQA----LAERKNRQAL---------LGDSSSQSWNAGVADR 181

Query: 278 SGMRRELMRLPNAHETDRSNLYTANQANDDFITSESDRQLLLIKQQDEELDELSASVERI 337
            G     ++L N+H                FI  +  +Q L+++QQDE+L+ +S S+  +
Sbjct: 182 YGRLDRELQLANSH----------------FIEEQQAQQQLIVEQQDEQLELVSGSIGVL 241

Query: 338 GGVGLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVA 397
             +   I  EL  Q  ++DD   E++ST +RLD V KK+A V    S + Q   I  L A
Sbjct: 242 KNMSQRIGGELEEQAVMLDDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWCAIAILFA 251

Query: 398 LFIILFVL 401
           + +++ +L
Sbjct: 302 VLVVVLIL 251

[Close]

BLAST of Clc06G00560 vs. ExPASy Swiss-Prot
Match: Q5ZL19 (Syntaxin-6 OS=Gallus gallus OX=9031 GN=STX6 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.6e-07
Identity = 78/308 (25.32%), Postives = 140/308 (45.45%), Query Frame = 0


Query: 98  SAQDPFYVVKDEIQESEFELEQGNWRVEIAIRLINCNPAFTNGKGYLLIQEREY--NKQK 157
           S +DPF+VVK E+Q++          V  A  L                +E ++  N+ +
Sbjct: 2   SMEDPFFVVKGEVQKA----------VNTAQGLFQRWTELLQDPSIATREEIDWTTNELR 61

Query: 158 SCLLLVKALNGRKVDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQSCHYSTEVC 217
           + L  ++      +++LD+ I++   +P  + +D  EL  R+ + ++ R        E+ 
Sbjct: 62  NNLRSIE----WDLEDLDETISIVEANPRKFNLDATELGIRKSFITSTR----QVVREMK 121

Query: 218 FQICHGISLFKAIINTQNIQVKCPFLLNSLNRQSIFYVGNVKKVVGAGKEQTGTASASGM 277
            Q+ +  S  +A+   +N Q     LL   + QS                 +G    S +
Sbjct: 122 DQMSN--SSMQALAERKNRQA----LLGESSSQS---------------WSSGPDKYSRL 181

Query: 278 RRELMRLPNAHETDRSNLYTANQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV 337
            REL +L N+H                FI  +  +Q L+++QQDE+L+ +S S+  +  +
Sbjct: 182 DREL-QLANSH----------------FIEEQQAQQQLIVEQQDEQLELVSGSIGVLKNM 241

Query: 338 GLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQ--IMMILFLVAL 397
              I  EL  Q  ++DD   E+DST +RLD V KK+A V    S + Q   +++LF++ L
Sbjct: 242 SQRIGGELEEQAVMLDDFSHELDSTHSRLDNVMKKLAKVSHMTSDRRQWCAIIVLFVILL 253

Query: 398 FIILFVLV 402
            +++  LV
Sbjct: 302 VVLVLFLV 253

[Close]

BLAST of Clc06G00560 vs. ExPASy TrEMBL
Match: A0A1S3CBB0 (syntaxin-61 OS=Cucumis melo OX=3656 GN=LOC103499013 PE=3 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 2.3e-91
Identity = 213/309 (68.93%), Postives = 222/309 (71.84%), Query Frame = 0


Query: 96  MPSAQDPFYVVKDEIQESEFELEQGNWRVEIAIRLINCNPAFTNGKGYLLIQEREYNKQK 155
           MPSAQDPFYVVKDEIQES  +L+    + E            ++  G  + Q +E     
Sbjct: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWE----------RISSDSGERVQQTKE----- 60

Query: 156 SCLLLVKALNGRKVDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQSCHYSTEVC 215
             LL        +VDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQ         
Sbjct: 61  --LLASCESIEWQVDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQ--------- 120

Query: 216 FQICHGISLFKAIINTQNIQVKCPFLLNSLNRQSIFYVGNVKKVVGAGKEQTGTASASGM 275
                                                VGNVKKVVGAGKEQTG ASASGM
Sbjct: 121 -------------------------------------VGNVKKVVGAGKEQTGIASASGM 180

Query: 276 RRELMRLPNAHETDRSNLYTANQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV 335
           RRELMRLPNAHETDRSNLYTA+QANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV
Sbjct: 181 RRELMRLPNAHETDRSNLYTAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV 240

Query: 336 GLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFI 395
           GLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFI
Sbjct: 241 GLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFI 246

Query: 396 ILFVLVFLT 405
           ILFVLVFLT
Sbjct: 301 ILFVLVFLT 246

[Close]

BLAST of Clc06G00560 vs. ExPASy TrEMBL
Match: A0A6J1CD97 (syntaxin-61 OS=Momordica charantia OX=3673 GN=LOC111010422 PE=3 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 3.1e-88
Identity = 208/309 (67.31%), Postives = 221/309 (71.52%), Query Frame = 0


Query: 96  MPSAQDPFYVVKDEIQESEFELEQGNWRVEIAIRLINCNPAFTNGKGYLLIQEREYNKQK 155
           MPSAQDPFYVVKDEIQES  +L+    + E     I+ +P    G+   L +E       
Sbjct: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWE----RISSDP----GERVQLTKE------- 60

Query: 156 SCLLLVKALNGRKVDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQSCHYSTEVC 215
             LL        +VDELDKAIAVAARDPSWYGIDD ELEKRRRWTSTARTQ         
Sbjct: 61  --LLAACESIEWQVDELDKAIAVAARDPSWYGIDDLELEKRRRWTSTARTQ--------- 120

Query: 216 FQICHGISLFKAIINTQNIQVKCPFLLNSLNRQSIFYVGNVKKVVGAGKEQTGTASASGM 275
                                                VGNVKKVVGAGKEQTG ASA+GM
Sbjct: 121 -------------------------------------VGNVKKVVGAGKEQTGPASANGM 180

Query: 276 RRELMRLPNAHETDRSNLYTANQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV 335
           RRELMRLPN H+TDRSNLYT +QANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV
Sbjct: 181 RRELMRLPNPHDTDRSNLYTPHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV 240

Query: 336 GLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFI 395
           GLTIHEELLAQDKIID+LGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFL+ALFI
Sbjct: 241 GLTIHEELLAQDKIIDELGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLLALFI 246

Query: 396 ILFVLVFLT 405
           ILFVLVFLT
Sbjct: 301 ILFVLVFLT 246

[Close]

BLAST of Clc06G00560 vs. ExPASy TrEMBL
Match: A0A6J1ICW6 (syntaxin-61-like OS=Cucurbita maxima OX=3661 GN=LOC111471400 PE=3 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 2.6e-87
Identity = 205/309 (66.34%), Postives = 220/309 (71.20%), Query Frame = 0


Query: 96  MPSAQDPFYVVKDEIQESEFELEQGNWRVEIAIRLINCNPAFTNGKGYLLIQEREYNKQK 155
           MPSAQDPFYVVKDEIQES  +L+    + E               + Y  + ER     K
Sbjct: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWE---------------RIYSDLGER-VQLTK 60

Query: 156 SCLLLVKALNGRKVDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQSCHYSTEVC 215
             L   +++   +VDELDKAIAVAARDPSWYGIDDAELE+RRRWTSTARTQ         
Sbjct: 61  ELLAACESIEW-QVDELDKAIAVAARDPSWYGIDDAELERRRRWTSTARTQ--------- 120

Query: 216 FQICHGISLFKAIINTQNIQVKCPFLLNSLNRQSIFYVGNVKKVVGAGKEQTGTASASGM 275
                                                VGNVKKVVGAGKEQTGTAS++GM
Sbjct: 121 -------------------------------------VGNVKKVVGAGKEQTGTASSNGM 180

Query: 276 RRELMRLPNAHETDRSNLYTANQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV 335
           RRELMRLPN HETDRSNLYTA+QANDDFITSESDRQLLLIK+QDEELDELSASVERIGGV
Sbjct: 181 RRELMRLPNPHETDRSNLYTAHQANDDFITSESDRQLLLIKRQDEELDELSASVERIGGV 240

Query: 336 GLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFI 395
           GLTIHEEL  QDKIIDDLG EMDSTSNRLDFVQKKVAVVMKKASAKGQ+MMILFLVALFI
Sbjct: 241 GLTIHEELKLQDKIIDDLGNEMDSTSNRLDFVQKKVAVVMKKASAKGQLMMILFLVALFI 246

Query: 396 ILFVLVFLT 405
           ILFVLVFLT
Sbjct: 301 ILFVLVFLT 246

[Close]

BLAST of Clc06G00560 vs. ExPASy TrEMBL
Match: A0A6J1EVC2 (syntaxin-61-like OS=Cucurbita moschata OX=3662 GN=LOC111438398 PE=3 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 1.7e-86
Identity = 204/309 (66.02%), Postives = 217/309 (70.23%), Query Frame = 0


Query: 96  MPSAQDPFYVVKDEIQESEFELEQGNWRVEIAIRLINCNPAFTNGKGYLLIQEREYNKQK 155
           MPSAQDPFYVVKDEIQES  +L+    + E          +   G+   L +E       
Sbjct: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWE--------RISSDLGERVQLTKE------- 60

Query: 156 SCLLLVKALNGRKVDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQSCHYSTEVC 215
             LL        +VDELDKAIAVAARDPSWYGIDDAELE+RRRWTSTARTQ         
Sbjct: 61  --LLAACESIEWQVDELDKAIAVAARDPSWYGIDDAELERRRRWTSTARTQ--------- 120

Query: 216 FQICHGISLFKAIINTQNIQVKCPFLLNSLNRQSIFYVGNVKKVVGAGKEQTGTASASGM 275
                                                VGNVKKVVGAGKEQ GTAS++GM
Sbjct: 121 -------------------------------------VGNVKKVVGAGKEQAGTASSNGM 180

Query: 276 RRELMRLPNAHETDRSNLYTANQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV 335
           RRELMRLPN HETDRSNLYTA+QANDDFITSESDRQLLLIK+QDEELDELSASVERIGGV
Sbjct: 181 RRELMRLPNPHETDRSNLYTAHQANDDFITSESDRQLLLIKRQDEELDELSASVERIGGV 240

Query: 336 GLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFI 395
           GLTIHEEL  QDKIIDDLG EMDSTSNRLDFVQKKVAVVMKKASAKGQ+MMILFLVALFI
Sbjct: 241 GLTIHEELKLQDKIIDDLGNEMDSTSNRLDFVQKKVAVVMKKASAKGQLMMILFLVALFI 246

Query: 396 ILFVLVFLT 405
           ILFVLVFLT
Sbjct: 301 ILFVLVFLT 246

[Close]

BLAST of Clc06G00560 vs. ExPASy TrEMBL
Match: A0A6J1H504 (syntaxin-61-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460202 PE=3 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 2.4e-85
Identity = 203/309 (65.70%), Postives = 218/309 (70.55%), Query Frame = 0


Query: 96  MPSAQDPFYVVKDEIQESEFELEQGNWRVEIAIRLINCNPAFTNGKGYLLIQEREYNKQK 155
           MPSAQDPFYVVKDEIQES  +++    + E     I+ +P              E  +Q 
Sbjct: 1   MPSAQDPFYVVKDEIQESIDKVQSSFHQWE----RISSDPG-------------ERAQQT 60

Query: 156 SCLLLVKALNGRKVDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQSCHYSTEVC 215
             LL        +VDELDKAIAVAARDPSWYGID AELEKRRRWTSTAR Q         
Sbjct: 61  KELLASCESIEWQVDELDKAIAVAARDPSWYGIDHAELEKRRRWTSTARMQ--------- 120

Query: 216 FQICHGISLFKAIINTQNIQVKCPFLLNSLNRQSIFYVGNVKKVVGAGKEQTGTASASGM 275
                                                VGNVKKVVGAGKEQTGTASASGM
Sbjct: 121 -------------------------------------VGNVKKVVGAGKEQTGTASASGM 180

Query: 276 RRELMRLPNAHETDRSNLYTANQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV 335
           RRELMRLPNA ET++SNLYTA+Q NDDF++SESDRQLLLI+QQDEELDELSASV RIGGV
Sbjct: 181 RRELMRLPNALETEKSNLYTAHQENDDFVSSESDRQLLLIRQQDEELDELSASVVRIGGV 240

Query: 336 GLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFI 395
           GLTIHEELLAQDKIID+LGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFI
Sbjct: 241 GLTIHEELLAQDKIIDNLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFI 246

Query: 396 ILFVLVFLT 405
           ILFVLVFLT
Sbjct: 301 ILFVLVFLT 246

[Close]

BLAST of Clc06G00560 vs. TAIR 10
Match: AT1G28490.2 (syntaxin of plants 61 )

HSP 1 Score: 244.2 bits (622), Expect = 1.8e-64
Identity = 147/251 (58.57%), Postives = 173/251 (68.92%), Query Frame = 0


Query: 154 QKSCLLLVKALNGRKVDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQSCHYSTE 213
           ++S LLLV+AL+GRKVDEL+KAI VAA+DPSWYGID+AELEKRRRWTS ARTQ       
Sbjct: 3   RRSLLLLVEALSGRKVDELEKAITVAAKDPSWYGIDEAELEKRRRWTSNARTQ------- 62

Query: 214 VCFQICHGISLFKAIINTQNIQVKCPFLLNSLNRQSIFYVGNVKKVVGAGKEQTGTASAS 273
                                                  V NVK  V AGK  +G   AS
Sbjct: 63  ---------------------------------------VRNVKSGVLAGKVSSGAGHAS 122

Query: 274 GMRRELMRLPNAHETDRSNLYTANQANDDFITSESDRQLLLIKQQDEELDELSASVERIG 333
            +RRELMR+PN+ E  R + Y   + +D F+ SESDRQ+LLIKQQDEELDELS SV+RIG
Sbjct: 123 EVRRELMRMPNSGEASRYDQY-GGRDDDGFVQSESDRQMLLIKQQDEELDELSKSVQRIG 182

Query: 334 GVGLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVAL 393
           GVGLTIH+EL+AQ++IID+L  EMDST NRL+FVQKKV +VMKKA AKGQ+MMI FL+ L
Sbjct: 183 GVGLTIHDELVAQERIIDELDTEMDSTKNRLEFVQKKVGMVMKKAGAKGQMMMICFLLVL 206

Query: 394 FIILFVLVFLT 405
           FIILFVLVFLT
Sbjct: 243 FIILFVLVFLT 206

[Close]

BLAST of Clc06G00560 vs. TAIR 10
Match: AT1G28490.1 (syntaxin of plants 61 )

HSP 1 Score: 237.7 bits (605), Expect = 1.7e-62
Identity = 155/309 (50.16%), Postives = 191/309 (61.81%), Query Frame = 0


Query: 96  MPSAQDPFYVVKDEIQESEFELEQGNWRVEIAIRLINCNPAFTNGKGYLLIQEREYNKQK 155
           M SAQDPFY+VK+EIQ+S  +L+    + E        +P   +          + +  K
Sbjct: 1   MSSAQDPFYIVKEEIQDSIDKLQSTFHKWE------RISPDMGD----------QAHVAK 60

Query: 156 SCLLLVKALNGRKVDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQSCHYSTEVC 215
             +    ++   +VDEL+KAI VAA+DPSWYGID+AELEKRRRWTS ARTQ         
Sbjct: 61  ELVATCGSIEW-QVDELEKAITVAAKDPSWYGIDEAELEKRRRWTSNARTQ--------- 120

Query: 216 FQICHGISLFKAIINTQNIQVKCPFLLNSLNRQSIFYVGNVKKVVGAGKEQTGTASASGM 275
                                                V NVK  V AGK  +G   AS +
Sbjct: 121 -------------------------------------VRNVKSGVLAGKVSSGAGHASEV 180

Query: 276 RRELMRLPNAHETDRSNLYTANQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV 335
           RRELMR+PN+ E  R + Y   + +D F+ SESDRQ+LLIKQQDEELDELS SV+RIGGV
Sbjct: 181 RRELMRMPNSGEASRYDQY-GGRDDDGFVQSESDRQMLLIKQQDEELDELSKSVQRIGGV 240

Query: 336 GLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFI 395
           GLTIH+EL+AQ++IID+L  EMDST NRL+FVQKKV +VMKKA AKGQ+MMI FL+ LFI
Sbjct: 241 GLTIHDELVAQERIIDELDTEMDSTKNRLEFVQKKVGMVMKKAGAKGQMMMICFLLVLFI 245

Query: 396 ILFVLVFLT 405
           ILFVLVFLT
Sbjct: 301 ILFVLVFLT 245

[Close]

BLAST of Clc06G00560 vs. TAIR 10
Match: AT1G16240.1 (syntaxin of plants 51 )

HSP 1 Score: 46.2 bits (108), Expect = 7.2e-05
Identity = 32/95 (33.68%), Postives = 56/95 (58.95%), Query Frame = 0


Query: 311 QLLLIKQQDEELDELSASVERIGGVGLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKK 370
           Q  ++++QDE L++L  +V     + L + EEL  Q ++IDDL   +D T +RL  VQK 
Sbjct: 135 QRQVMREQDEGLEQLEGTVMSTKHIALAVSEELDLQTRLIDDLDYHVDVTDSRLRRVQKS 194

Query: 371 VAVVMKK----ASAKGQIMMILFLVALFIILFVLV 402
           +AV+ K      S    ++ +L +V L +++++LV
Sbjct: 195 LAVMNKNMRSGCSCMSMLLSVLGIVGLAVVIWMLV 229

[Close]

BLAST of Clc06G00560 vs. TAIR 10
Match: AT1G16240.2 (syntaxin of plants 51 )

HSP 1 Score: 46.2 bits (108), Expect = 7.2e-05
Identity = 32/95 (33.68%), Postives = 56/95 (58.95%), Query Frame = 0


Query: 311 QLLLIKQQDEELDELSASVERIGGVGLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQKK 370
           Q  ++++QDE L++L  +V     + L + EEL  Q ++IDDL   +D T +RL  VQK 
Sbjct: 135 QRQVMREQDEGLEQLEGTVMSTKHIALAVSEELDLQTRLIDDLDYHVDVTDSRLRRVQKS 194

Query: 371 VAVVMKK----ASAKGQIMMILFLVALFIILFVLV 402
           +AV+ K      S    ++ +L +V L +++++LV
Sbjct: 195 LAVMNKNMRSGCSCMSMLLSVLGIVGLAVVIWMLV 229

[Close]

BLAST of Clc06G00560 vs. TAIR 10
Match: AT1G79590.1 (syntaxin of plants 52 )

HSP 1 Score: 45.8 bits (107), Expect = 9.4e-05
Identity = 38/125 (30.40%), Postives = 70/125 (56.00%), Query Frame = 0


Query: 289 DRSNLYTANQANDDFI--TSESDRQLLLI------KQQDEELDELSASVERIGGVGLTIH 348
           +R +L+  +   DD I   S  D Q +++      ++QDE L++L  +V     + L ++
Sbjct: 106 NRDSLFGTDLKPDDAINRVSGMDNQGIVVFQRQVMREQDEGLEKLEETVMSTKHIALAVN 165

Query: 349 EELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKK----ASAKGQIMMILFLVALFII 402
           EEL  Q ++IDDL  ++D T +RL  VQK +A++ K      S    ++ +L +V L ++
Sbjct: 166 EELTLQTRLIDDLDYDVDITDSRLRRVQKSLALMNKSMKSGCSCMSMLLSVLGIVGLALV 225

The following BLAST results are available for this feature:

BLAST of Clc06G00560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906665.1	5.6e-92	68.93	syntaxin-61 [Benincasa hispida]	[more]
XP_008460099.1	4.7e-91	68.93	PREDICTED: syntaxin-61 [Cucumis melo]	[more]
KAG6574801.1	4.0e-90	60.88	Syntaxin-61, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_004154296.1	5.2e-90	68.28	syntaxin-61 [Cucumis sativus] >XP_031742420.1 syntaxin-61 [Cucumis sativus] >KAE...	[more]
XP_022139529.1	6.4e-88	67.31	syntaxin-61 [Momordica charantia] >XP_022139530.1 syntaxin-61 [Momordica charant...	[more]

BLAST of Clc06G00560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q946Y7	2.4e-61	50.16	Syntaxin-61 OS=Arabidopsis thaliana OX=3702 GN=SYP61 PE=1 SV=1	[more]
O43752	1.4e-08	25.16	Syntaxin-6 OS=Homo sapiens OX=9606 GN=STX6 PE=1 SV=1	[more]
Q5R6Q2	1.4e-08	25.16	Syntaxin-6 OS=Pongo abelii OX=9601 GN=STX6 PE=2 SV=1	[more]
Q9JKK1	1.8e-08	24.35	Syntaxin-6 OS=Mus musculus OX=10090 GN=Stx6 PE=1 SV=1	[more]
Q5ZL19	2.6e-07	25.32	Syntaxin-6 OS=Gallus gallus OX=9031 GN=STX6 PE=2 SV=1	[more]

BLAST of Clc06G00560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CBB0	2.3e-91	68.93	syntaxin-61 OS=Cucumis melo OX=3656 GN=LOC103499013 PE=3 SV=1	[more]
A0A6J1CD97	3.1e-88	67.31	syntaxin-61 OS=Momordica charantia OX=3673 GN=LOC111010422 PE=3 SV=1	[more]
A0A6J1ICW6	2.6e-87	66.34	syntaxin-61-like OS=Cucurbita maxima OX=3661 GN=LOC111471400 PE=3 SV=1	[more]
A0A6J1EVC2	1.7e-86	66.02	syntaxin-61-like OS=Cucurbita moschata OX=3662 GN=LOC111438398 PE=3 SV=1	[more]
A0A6J1H504	2.4e-85	65.70	syntaxin-61-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460202 PE=3 S...	[more]

BLAST of Clc06G00560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28490.2	1.8e-64	58.57	syntaxin of plants 61	[more]
AT1G28490.1	1.7e-62	50.16	syntaxin of plants 61	[more]
AT1G16240.1	7.2e-05	33.68	syntaxin of plants 51	[more]
AT1G16240.2	7.2e-05	33.68	syntaxin of plants 51	[more]
AT1G79590.1	9.4e-05	30.40	syntaxin of plants 52	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000727	Target SNARE coiled-coil homology domain	SMART	SM00397	tSNARE_6	coord: 307..374 e-value: 1.4E-7 score: 41.2
IPR000727	Target SNARE coiled-coil homology domain	PFAM	PF05739	SNARE	coord: 349..400 e-value: 5.9E-9 score: 35.8
IPR000727	Target SNARE coiled-coil homology domain	PROSITE	PS50192	T_SNARE	coord: 312..374 score: 13.031445
None	No IPR available	GENE3D	1.20.5.110		coord: 319..383 e-value: 2.4E-17 score: 64.6
None	No IPR available	GENE3D	1.20.58.90		coord: 97..215 e-value: 7.5E-9 score: 37.6
None	No IPR available	PANTHER	PTHR19957	SYNTAXIN	coord: 96..403
None	No IPR available	PANTHER	PTHR19957:SF224	SYNTAXIN-61	coord: 96..403
None	No IPR available	CDD	cd15841	SNARE_Qc	coord: 315..372 e-value: 8.05552E-19 score: 77.5988
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 311..374
IPR015260	Syntaxin 6, N-terminal	PFAM	PF09177	Syntaxin-6_N	coord: 101..206 e-value: 4.2E-7 score: 30.4
IPR006012	Syntaxin/epimorphin, conserved site	PROSITE	PS00914	SYNTAXIN	coord: 318..357
IPR010989	SNARE	SUPERFAMILY	47661	t-snare proteins	coord: 100..206

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G00560.2	Clc06G00560.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016020	membrane
molecular_function	GO:0005484	SNAP receptor activity