Clc06G00270 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G00270
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	MADS-box transcription factor 6
Location	ClcChr06: 247213 .. 251956 (+)
RNA-Seq Expression	Clc06G00270
Synteny	Clc06G00270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGAGGAAGAGTGGAACTGAAGAGAATAGAGAACAAAATCAACCGTCAAGTTACATTCTCAAAACGCCGAAACGGACTCCTGAAAAAGGCTTATGAACTGTCTGTTCTTTGCGATGCGGAAGTGGCTTTGATCATCTTCTCCACCCGCGGCAAGCTCTACGAATTTGGCAGTGCTGGGTAGTTTCTTTTTTTCTTTTCTTTTCCAGATCTGCTTCCCCGTCTTTACTGTCCTCTTTCTTTCATCAATTTGGAAACCCCTTCTGCCTTTGCCTTTTTCTTCTTCTTCTTCTTCTTTCAGACCTTTGTGTATAAAAATGAAACTAGGGTTTTCTCCCATCTTCAGCCCCTTTTTTGTGTCTTTTACTTTTCACCCTTTAATCCCTTGGTAATCTCTATTCTCTCTCCCCATTTCATTATCGCATTGGTAATTTCGTTTTATTTTTCCATTTTGTGTGTGTAGTACCACCAAAACATTGGAGCGATATCAACGTTGTTGCTTCTCTCCTCAACACAATTATGCTGAACGACAAACCCAGGTTCTTCTTTCTTCTCTTCTTTTCTCCCCCCTTTCCTTCACTATTTTTATATCCTTTTCTTTTTTCACTTTTTACTACTAAAATCCTTGCTTTCTTTCTGGCTGTGGTTTTGGTGAATTTGGTTAGGTTTAAGCTAAATTTCATTCGTCAAAAACTACTTTTCTATTTTTTACTTTTGAGAAATCCTTTTAGGATTTAAAACTGCTTTTCGAGTGGATTATTAGATAATAAATAAAACTATGTTGGTTTTTAATATAAACCGGATTTACAAAACTTTTTTTTTTTTTTCTTTTCCTTTTCTGGGTTTTCATATATATATAATTTTTTTTTGTTGCCTAAAATGTTAGGATGTTTGAAAAAAGTGGATTACACAATGAAGAAACTGTATGTTGGTTCATGTATTTTGGAAATTTCATACTTTTTTTTTTTTTTTTTTTTTTTAAATAATCAGTCTGTTTATGAGTAATTTCTTTATCTTTTTTTATTTTCTTAAATATGGAGTCTACTTCGAAAACATTTTTTTTTGTTTAAAAAATAATAATAACAAAGTGTTAAAAACACACACATATATAAGAAATTGAACCCTCATGACTTAAATCACAACCCATGATGTAATGGAAGCCTAAAAACAAATTTATCCAGACCATTTTTCTTCCTAAGCAAATTAATTTAGACAACAACATCAATTATTGAGTTAGAAGTAGACTCACTAATTGGTTGGAGCAAATGTGTTGATCAGTTAAACTACATTTAAGTCATGTTTGAAAGTAATTTTAAAATGACTAAAATTACTTTTGTCATTTTCAAAATCACTGTTAGACATATTTTTAATCCTTCAAAAGACATGAAAATTTCATAAAAAGTATAAAATTGAAAACTAAATTAATCTCAAGTGATTTTAACGATTTTAAAATCACTTCCAAACATACACTTAAATAGGCGGTTATAAGATCCATAGTCCAATTATTCATACATAATCCATCTATCATTTATAATTAAGAAAGAAATACGGTGATATTGTTTTTGCTAACGGTGTTCGATTAATCACTACAATATGCAGAACTGGTTCCAGGAGATCTCAAAACTGAAAGCTAAATATGAATCTCTTTGCCGCACTCATAGGTTAAATAATCTCTAAACTTGTAATTTGGATATAATTATTAATAATTTAGGTTTAGATTATTTGAAAGCATGCAATAAAGTTTGAACCATAGTAGGCATTTGCTTGGGGAAGATCTTGGACCATTGAGTGTAAAGGAGCTCCAAAATCTTGAGAAGCAACTTGAAGCAGCCCTTGCTCAAGCTAGACAAAGGAAGGTAACCTCCTTACAAAACTTTTCTCTCTCCCACTCTTTTTATTCTTATTTTGGTTTTTTAATTTTAGCTTAAAATAAGCATTTAGTCCCCTCTAATAATCATTTGGTTGGTTTTGTATTTTTGAAAATTCTGTTTATTTTCTCACAATTTCTTACTCTTACTCATAGTTTTTACCTTTCCTATATTAGCTTTTGAATGCTAAACAAAACTATTTTTTCAAAACTATTTTTTTAGCTTTTGATTTTGAAACACTCTTAAAAGGTAAACCACCCACTATAGAAGCTAATAGATGAAAGTGATGTTCATAGGCTTAATTTTTAAAAACTAAAATAAAAAATAGAAATGGTTATCAAACGAGACTTTAGACTTTAAATTATGAAATGTAACCATCCGTATACTCTAAAATATACAATAATCTAATCTCTATGGAGGTTGAAGTAAGGTTTTAAAACTTCTACATTTGTTAATTTATCAATACAATTTTTCAAGGGTTCTATTTTAGTTTTCTTAAACTTTCAACTTCGCCTCTTAAATTTTGCTAAAAATCATAATAATCATCGTTTTAAATTTTTATTAATTATTTAATTGAAGCTGGATGTATTTTATTTAAAACCTAAGTATAACTTACTACGCATGTCGCCGGTACATCACATTTAAACATCAAATGAATGCACCAAAAAATTGTCTCTTTTAGATTTCTTTTCTATTAGTTTATTATTATCTTTTTATAAAAAAACCTAACAAAAACCTAAAATGATTTTGGTGAAATTAAAATACAAATAAAATAAAAATGATTTTTTGGGGGGTTTATGGAAAATTTAGTTGTAATTCTGTTATTCATGGCAGACACAGATTATGATTGAGCAGATGGAAGACCTGCGCAGAAAGGTAAAGCAAATTTAATATTAAAAATTTTTACATTTTGGCTTTTGTGCAACAAGACATCTAACGTAGGACTTATCCAATTATTATTTTTATTAACCTCAATTATAAAAAATTTACTTTGGATTCAAAATAGTTTTCAACCGTCTAAAAGTTTAAAAAATATCTTTAAACTTTTCAAAGAGTTTAAGAATATTCTCATCATTAATTTATTTATAAAAAATGTTAGAGTTTTGTATCAAAAATACCCTTAAAACGTTCAAAAATATAAAAAGTATACTTAAATTTAAATAAGTTAAAAAAATACCCGTACTGCTAGTATATGAACAAAAACAGTTAATACTTCATTGCAAAAAATAATTTTGAAAGTTAGAAAAGAAATGTATTAAAATGCTCCTACCCTTTGAAGTTTTCTTAAATTCGAAAAAAACAAATTATTTAGATATCATCATTTTTTTTTATATAGATAATTTCATTTTTCTACTGTATGTCCAATTCTTACACCGGTTTTCTCAGCAACCAAAATAAAAACCAAAAGTTTAAGTTAAAACATAAATTTCCACAAAACCTCAAAAAATTCCAAATTCAAAATCTCTTATTAAAGCATACCAAAACAATAAATAGCAAAATAAAAAAAAAAGTATTTGGTTGTTAACAGACACTGATCAACTACTAAAGTACAATCTTGTAAAACACATTTAAGTTCTCAGACCGTGCTTTTGTTATTCTTTTTCTTCTTGTTTAGCTCTAGACCTTAACTAAAGTGTGCGGTTTATTTATTCATCATTATTATTATTCTAGATAAACTAATATCAAGCAGTTAACAAAAATGAGGGTAAGATATTATCGAAGGAGAAGGTGGAAAAGAAAGAGGGAAACTAAAGAAGTAAGGGTGTATTGACGAATTATGTTCATTTACAAATAATAAGGGTATTTTTGAAACTTTTAAAAGTTCAATGGTGTTTTTGACATAAAACATTGATGGTTCTAAACTTTTTTGGAAGTTTAAAAGTATCTTTCGAAAGTTTAAGTGAGTTTTTGACACAAAGTAATGAATTATGATAGTAATTGAAACGGAGACCATCAATAAAATAGAGTTGAAGTAGCATAAAATTTAAGCTCTTGACGTTGAAGTTATTAGAGATTTTTGCACTCCACACGTATTGTTTAAAAAAAATTATGGATCATATATGCTCAATTATGTGATGAATTATTTTAAACTTTGAACGCCATCACGATACATGTATAAGGCATCCGAGAGATGAACGTAGTTTATAAAATCACTCATAATGTGCTTAATTTGGTAATTTCTTTGTAATAATGTTTTTAATGATGTGGTATTGTAAATGACAGGAGCGTCAACTTGGGGACCTCAACCGGGAGCTTAAGCTCAAGGTTTTTATTACCCTATAAGTTTCTTTGTCCATTTTTTTTTTTTTTTTTAATAGTTCTTTTAATGTTAAAAAATAAATATATAACATTTAATTTGTGTATTTTATATATTAGCTTGAAGCAGAGGGACAAAATCTTACAGCCATCCAAAGTTTTTGGAGCTCTGGGTCTGGCTCTGCTGAACATGCCAACAACTTCCCATTGCATCCTTTACCACCTAACCCTATCGAATGCCAACATGAACCCGTCTTACAAATCGGGTATCTCTAAATCCTCTTCCATTAATAAACTTGTTTTGTATTTACTTAAATACTCCTAAAGTTATAAGAAATAAGTTTGGCTAATTAATGTGTGTCATAACTCCCAAGTTAAGTTACTGTTACACCAATAAATATTATTATTATTGCCTCCTCAACTTTGGATTATTTGATGTATGGAGCAATCTACCTATTGTGTCATATTTATTATTATTGTGGTTGTTACTTGTTATAATAAATAATAATGATAATTTTGGACAAACACAGGTACCAGAATTATTTCTCAGAAGAGGGGCCATCTGTCCAAAAGAGCATGACATGTGAGACAAACTTCATACAAGGATGGGTTATTTGA

mRNA sequence

ATGGGAAGAGGAAGAGTGGAACTGAAGAGAATAGAGAACAAAATCAACCGTCAAGTTACATTCTCAAAACGCCGAAACGGACTCCTGAAAAAGGCTTATGAACTGTCTGTTCTTTGCGATGCGGAAGTGGCTTTGATCATCTTCTCCACCCGCGGCAAGCTCTACGAATTTGGCAGTGCTGGTACCACCAAAACATTGGAGCGATATCAACGTTGTTGCTTCTCTCCTCAACACAATTATGCTGAACGACAAACCCAGAACTGGTTCCAGGAGATCTCAAAACTGAAAGCTAAATATGAATCTCTTTGCCGCACTCATAGTAGGCATTTGCTTGGGGAAGATCTTGGACCATTGAGTGTAAAGGAGCTCCAAAATCTTGAGAAGCAACTTGAAGCAGCCCTTGCTCAAGCTAGACAAAGGAAGACACAGATTATGATTGAGCAGATGGAAGACCTGCGCAGAAAGGAGCGTCAACTTGGGGACCTCAACCGGGAGCTTAAGCTCAAGCTTGAAGCAGAGGGACAAAATCTTACAGCCATCCAAAGTTTTTGGAGCTCTGGGTCTGGCTCTGCTGAACATGCCAACAACTTCCCATTGCATCCTTTACCACCTAACCCTATCGAATGCCAACATGAACCCGTCTTACAAATCGGGTACCAGAATTATTTCTCAGAAGAGGGGCCATCTGTCCAAAAGAGCATGACATGTGAGACAAACTTCATACAAGGATGGGTTATTTGA

Coding sequence (CDS)

ATGGGAAGAGGAAGAGTGGAACTGAAGAGAATAGAGAACAAAATCAACCGTCAAGTTACATTCTCAAAACGCCGAAACGGACTCCTGAAAAAGGCTTATGAACTGTCTGTTCTTTGCGATGCGGAAGTGGCTTTGATCATCTTCTCCACCCGCGGCAAGCTCTACGAATTTGGCAGTGCTGGTACCACCAAAACATTGGAGCGATATCAACGTTGTTGCTTCTCTCCTCAACACAATTATGCTGAACGACAAACCCAGAACTGGTTCCAGGAGATCTCAAAACTGAAAGCTAAATATGAATCTCTTTGCCGCACTCATAGTAGGCATTTGCTTGGGGAAGATCTTGGACCATTGAGTGTAAAGGAGCTCCAAAATCTTGAGAAGCAACTTGAAGCAGCCCTTGCTCAAGCTAGACAAAGGAAGACACAGATTATGATTGAGCAGATGGAAGACCTGCGCAGAAAGGAGCGTCAACTTGGGGACCTCAACCGGGAGCTTAAGCTCAAGCTTGAAGCAGAGGGACAAAATCTTACAGCCATCCAAAGTTTTTGGAGCTCTGGGTCTGGCTCTGCTGAACATGCCAACAACTTCCCATTGCATCCTTTACCACCTAACCCTATCGAATGCCAACATGAACCCGTCTTACAAATCGGGTACCAGAATTATTTCTCAGAAGAGGGGCCATCTGTCCAAAAGAGCATGACATGTGAGACAAACTTCATACAAGGATGGGTTATTTGA

Protein sequence

MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSAGTTKTLERYQRCCFSPQHNYAERQTQNWFQEISKLKAKYESLCRTHSRHLLGEDLGPLSVKELQNLEKQLEAALAQARQRKTQIMIEQMEDLRRKERQLGDLNRELKLKLEAEGQNLTAIQSFWSSGSGSAEHANNFPLHPLPPNPIECQHEPVLQIGYQNYFSEEGPSVQKSMTCETNFIQGWVI

Homology

[Close]

BLAST of Clc06G00270 vs. NCBI nr
Match: XP_038877325.1 (agamous-like MADS-box protein MADS3 isoform X1 [Benincasa hispida])

HSP 1 Score: 456.1 bits (1172), Expect = 2.0e-124
Identity = 233/247 (94.33%), Postives = 239/247 (96.76%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQHNYAERQTQNWFQEISKLKAKYESLCRTHSRHLLGEDLGPLSV 120
           GT+KTLERYQRCCFSPQHNYAER+TQNWFQEISKLKAKYESLCRTH RHLLGEDLGPLSV
Sbjct: 61  GTSKTLERYQRCCFSPQHNYAERETQNWFQEISKLKAKYESLCRTH-RHLLGEDLGPLSV 120

Query: 121 KELQNLEKQLEAALAQARQRKTQIMIEQMEDLRRKERQLGDLNRELKLKLEAEGQNLTAI 180
           KELQNLEKQLEAALAQARQRKTQIMIEQMEDLRRKERQLG+LNRELKLKLEAEGQNLT I
Sbjct: 121 KELQNLEKQLEAALAQARQRKTQIMIEQMEDLRRKERQLGELNRELKLKLEAEGQNLTGI 180

Query: 181 QSFWSSGSGSAEHANNFPL-HPLPPNPIECQHEPVLQIGYQNYFSEEGPSVQKSMTCETN 240
           QSFWSSGSGSA HANNF L HPL  NPIECQH+P+LQIGYQNY SEEGPSV+KSMTCETN
Sbjct: 181 QSFWSSGSGSAGHANNFQLHHPLQSNPIECQHQPLLQIGYQNYLSEEGPSVEKSMTCETN 240

Query: 241 FIQGWVI 247
           FIQGWVI
Sbjct: 241 FIQGWVI 246

[Close]

BLAST of Clc06G00270 vs. NCBI nr
Match: XP_011656687.1 (agamous-like MADS-box protein MADS3 [Cucumis sativus] >XP_011656689.1 agamous-like MADS-box protein MADS3 [Cucumis sativus] >KAE8646695.1 hypothetical protein Csa_005363 [Cucumis sativus])

HSP 1 Score: 435.6 bits (1119), Expect = 2.8e-118
Identity = 223/248 (89.92%), Postives = 236/248 (95.16%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQHNYAERQTQNWFQEISKLKAKYESLCRTHSRHLLGEDLGPLSV 120
           GT+KTLERYQRCCFSPQHN+AER+TQNWFQEISKLKAKYESLCRTH RHLLGEDLGPLSV
Sbjct: 61  GTSKTLERYQRCCFSPQHNFAERETQNWFQEISKLKAKYESLCRTH-RHLLGEDLGPLSV 120

Query: 121 KELQNLEKQLEAALAQARQRKTQIMIEQMEDLRRKERQLGDLNRELKLKLEAEGQNLTAI 180
           KELQNLEKQLEAAL+QARQRKTQIMIEQME+LR+KERQLG LNRELKLKLEAEGQN+  I
Sbjct: 121 KELQNLEKQLEAALSQARQRKTQIMIEQMENLRKKERQLGILNRELKLKLEAEGQNVRGI 180

Query: 181 QSFWSSGSGSAEHANNFPL-HPLPPNPIECQHEPVLQIGYQNYFSEEGPS-VQKSMTCET 240
           +SFWS GSGS    NNFPL HPL P+PI+CQH+P+LQIGYQNYFSEEGPS VQK+MTCET
Sbjct: 181 ESFWSCGSGSGHPNNNFPLHHPLQPDPIDCQHQPLLQIGYQNYFSEEGPSHVQKTMTCET 240

Query: 241 NFIQGWVI 247
           NFIQGWVI
Sbjct: 241 NFIQGWVI 247

[Close]

BLAST of Clc06G00270 vs. NCBI nr
Match: XP_008460143.1 (PREDICTED: agamous-like MADS-box protein AGL6 [Cucumis melo] >XP_008460144.1 PREDICTED: agamous-like MADS-box protein AGL6 [Cucumis melo])

HSP 1 Score: 431.0 bits (1107), Expect = 6.8e-117
Identity = 223/250 (89.20%), Postives = 236/250 (94.40%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQHNYAERQTQNWFQEISKLKAKYESLCRTHSRHLLGEDLGPLSV 120
           GT+KTLERYQRCCFSPQHN+AER+TQNWFQEISKLKAKYESLCRTH RHLLGEDLGPLSV
Sbjct: 61  GTSKTLERYQRCCFSPQHNFAERETQNWFQEISKLKAKYESLCRTH-RHLLGEDLGPLSV 120

Query: 121 KELQNLEKQLEAALAQARQRKTQIMIEQMEDLRRKERQLGDLNRELKLKLEAEGQNLTAI 180
           KELQNLEKQLEAAL+QARQRKTQIMIEQMEDLR+KE QLG+LNRELKLKLEAEGQN+  I
Sbjct: 121 KELQNLEKQLEAALSQARQRKTQIMIEQMEDLRKKELQLGNLNRELKLKLEAEGQNVRGI 180

Query: 181 QSFWS--SGSGSAEHANNFPL-HPLPPNPIECQHEPVLQIGYQNYFSEEGPS-VQKSMTC 240
           +SFWS  SGS S    NNFPL HPL P+PI+CQH+P+LQIGYQNYFSEEGPS VQK+MTC
Sbjct: 181 ESFWSCASGSASGHPNNNFPLHHPLQPDPIDCQHQPLLQIGYQNYFSEEGPSHVQKTMTC 240

Query: 241 ETNFIQGWVI 247
           ETNFIQGWVI
Sbjct: 241 ETNFIQGWVI 249

[Close]

BLAST of Clc06G00270 vs. NCBI nr
Match: XP_022146242.1 (agamous-like MADS-box protein AGL6 [Momordica charantia])

HSP 1 Score: 421.0 bits (1081), Expect = 7.0e-114
Identity = 220/248 (88.71%), Postives = 230/248 (92.74%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQHNYAERQTQNWFQEISKLKAKYESLCRTHSRHLLGEDLGPLSV 120
           GTTKTLERYQRCCFSPQ N+ ERQTQ+WFQEISKLK KYESLCRT  RHLLGEDLGPLSV
Sbjct: 61  GTTKTLERYQRCCFSPQDNHIERQTQSWFQEISKLKVKYESLCRT-QRHLLGEDLGPLSV 120

Query: 121 KELQNLEKQLEAALAQARQRKTQIMIEQMEDLRRKERQLGDLNRELKLKLEAEGQNLTAI 180
           KELQNLEKQLEAALAQARQRKTQ+MIEQME LRRKERQLGDLN+EL+LKLEAEGQNL AI
Sbjct: 121 KELQNLEKQLEAALAQARQRKTQMMIEQMEALRRKERQLGDLNKELRLKLEAEGQNLKAI 180

Query: 181 QSFWSSGSGSAEHANNFPLHPLPPNPIECQHE-PVLQIGYQNYFSEEGPSVQKSM-TCET 240
           QSFWSS S +A H N+FPLH    +PIECQHE PVLQIGYQNYFS EGPSV+KSM TCET
Sbjct: 181 QSFWSSSSAAAGHGNDFPLHHSQASPIECQHEQPVLQIGYQNYFSAEGPSVRKSMTTCET 240

Query: 241 NFIQGWVI 247
           NFIQGWVI
Sbjct: 241 NFIQGWVI 247

[Close]

BLAST of Clc06G00270 vs. NCBI nr
Match: ABE03878.1 (AGAMOUS LIKE6-like protein [Momordica charantia])

HSP 1 Score: 419.9 bits (1078), Expect = 1.6e-113
Identity = 219/248 (88.31%), Postives = 230/248 (92.74%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQHNYAERQTQNWFQEISKLKAKYESLCRTHSRHLLGEDLGPLSV 120
           GTTKTLERYQRCCFSPQ N+ ERQTQ+WFQEISKLK KYESLCRT  RHLLGEDLGPLSV
Sbjct: 61  GTTKTLERYQRCCFSPQDNHIERQTQSWFQEISKLKVKYESLCRT-QRHLLGEDLGPLSV 120

Query: 121 KELQNLEKQLEAALAQARQRKTQIMIEQMEDLRRKERQLGDLNRELKLKLEAEGQNLTAI 180
           KELQNLEKQLEAALAQARQRKTQ+MI+QME LRRKERQLGDLN+EL+LKLEAEGQNL AI
Sbjct: 121 KELQNLEKQLEAALAQARQRKTQMMIDQMEALRRKERQLGDLNKELRLKLEAEGQNLKAI 180

Query: 181 QSFWSSGSGSAEHANNFPLHPLPPNPIECQHE-PVLQIGYQNYFSEEGPSVQKSM-TCET 240
           QSFWSS S +A H N+FPLH    +PIECQHE PVLQIGYQNYFS EGPSV+KSM TCET
Sbjct: 181 QSFWSSSSAAAGHGNDFPLHHSQASPIECQHEQPVLQIGYQNYFSAEGPSVRKSMTTCET 240

Query: 241 NFIQGWVI 247
           NFIQGWVI
Sbjct: 241 NFIQGWVI 247

[Close]

BLAST of Clc06G00270 vs. ExPASy Swiss-Prot
Match: Q8LLR1 (Agamous-like MADS-box protein MADS3 OS=Vitis vinifera OX=29760 GN=MADS3 PE=2 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.3e-102
Identity = 193/246 (78.46%), Postives = 218/246 (88.62%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQHNYAERQTQNWFQEISKLKAKYESLCRTHSRHLLGEDLGPLSV 120
           GTTKTLERYQR C++PQ N  E +TQ+W+QE+SKLKAKYESL RT  RHLLGEDLGPLSV
Sbjct: 61  GTTKTLERYQRVCYTPQDNNMECETQSWYQEVSKLKAKYESLQRT-QRHLLGEDLGPLSV 120

Query: 121 KELQNLEKQLEAALAQARQRKTQIMIEQMEDLRRKERQLGDLNRELKLKLEAEGQNLTAI 180
           KELQNLEKQLE ALAQARQRKTQ+MIEQMEDLRRKERQLGDLN++LKLKLEAEGQ+L AI
Sbjct: 121 KELQNLEKQLEGALAQARQRKTQMMIEQMEDLRRKERQLGDLNKQLKLKLEAEGQSLKAI 180

Query: 181 QSFWSSGSGSAEHANNFPLHPLPPNPIECQHEPVLQIGYQNYFSEEGPSVQKSMTCETNF 240
           Q  W+  + +A + ++FP+HP   NP++C+ EP+LQIGY +Y   EGPSV KSM  E+NF
Sbjct: 181 QGSWNPSTATAGN-SSFPVHPSQSNPMDCEPEPILQIGYHHYVPAEGPSVSKSMAGESNF 240

Query: 241 IQGWVI 247
           IQGWV+
Sbjct: 241 IQGWVL 244

[Close]

BLAST of Clc06G00270 vs. ExPASy Swiss-Prot
Match: P29386 (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana OX=3702 GN=AGL6 PE=1 SV=2)

HSP 1 Score: 298.9 bits (764), Expect = 5.3e-80
Identity = 164/253 (64.82%), Postives = 194/253 (76.68%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60
           MGRGRVE+KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFGS 
Sbjct: 1   MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSV 60

Query: 61  GTTKTLERYQRCC-FSPQHNYAERQTQNWFQEISKLKAKYESLCRTHSRHLLGEDLGPLS 120
           G   T+ERY RC   S  +N  E  TQ+W QE++KLK+KYESL RT +R+LLGEDLG + 
Sbjct: 61  GIESTIERYNRCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRT-NRNLLGEDLGEMG 120

Query: 121 VKELQNLEKQLEAALAQARQRKTQIMIEQMEDLRRKERQLGDLNRELKLKLEAEGQNLTA 180
           VKELQ LE+QLEAAL   RQRKTQ+M+E+MEDLR+KERQLGD+N++LK+K E EG     
Sbjct: 121 VKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKFETEGHAFKT 180

Query: 181 IQSFWSSGSGS-AEHANN--FPLHPLPPNPIECQHEPVLQIGYQN--YFSEEGPSVQKS- 240
            Q  W++ + S A   NN  FP+ P  PN ++C  EP LQIG+Q   Y   EG SV KS 
Sbjct: 181 FQDLWANSAASVAGDPNNSEFPVEPSHPNVLDCNTEPFLQIGFQQHYYVQGEGSSVSKSN 240

Query: 241 MTCETNFIQGWVI 247
           +  ETNF+QGWV+
Sbjct: 241 VAGETNFVQGWVL 252

[Close]

BLAST of Clc06G00270 vs. ExPASy Swiss-Prot
Match: Q6EU39 (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS6 PE=1 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 3.8e-78
Identity = 168/254 (66.14%), Postives = 195/254 (76.77%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQ-HNYAERQTQNWFQEISKLKAKYESLCRTHSRHLLGEDLGPLS 120
           G TKTLERYQ CC++ Q  N A  +TQ+W+ E+SKLKAK+E+L RT  RHLLGEDLGPLS
Sbjct: 61  GITKTLERYQHCCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRT-QRHLLGEDLGPLS 120

Query: 121 VKELQNLEKQLEAALAQARQRKTQIMIEQMEDLRRKERQLGDLNRELKLKLEAEG--QNL 180
           VKELQ LEKQLE AL+QARQRKTQ+M+EQ+E+LRRKERQLG++NR+LK KLE EG   N 
Sbjct: 121 VKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKLEVEGSTSNY 180

Query: 181 TAI-QSFWSSGSGSAEHANNFPLHPLPPNPIECQHEPVLQIGYQNYF-SEEGPSVQKSMT 240
            A+ Q+ W+ G   A   N       PP+      EP LQIGY + F   E  ++Q+S  
Sbjct: 181 RAMQQASWAQG---AVVENGAAYVQPPPHSAAMDSEPTLQIGYPHQFVPAEANTIQRSTA 240

Query: 241 ---CETNFIQGWVI 247
               E NF+ GWV+
Sbjct: 241 PAGAENNFMLGWVL 250

[Close]

BLAST of Clc06G00270 vs. ExPASy Swiss-Prot
Match: Q7XUN2 (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS17 PE=1 SV=2)

HSP 1 Score: 270.8 bits (691), Expect = 1.5e-71
Identity = 155/253 (61.26%), Postives = 187/253 (73.91%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQHN---YAERQTQNWFQEISKLKAKYESLCRTHSRHLLGEDLGP 120
           G  KTLE+Y  CC++ Q +    A  + Q+W+QE+S+LK K E L R+  RH+LGEDLGP
Sbjct: 61  GINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRS-QRHMLGEDLGP 120

Query: 121 LSVKELQNLEKQLEAALAQARQRKTQIMIEQMEDLRRKERQLGDLNRELKLKLEAEGQN- 180
           LS+KELQ LEKQLE +L+QARQRKTQIM+EQ++DLRRKERQLG+LN++LK KLEAE  + 
Sbjct: 121 LSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKLEAEADSS 180

Query: 181 --LTAIQSFWSSGSGSAEHANNFPLHPLPPNPIECQHEPVLQIGYQNYFSEEGPSVQKS- 240
              +AIQ  W  G+     +    L+  PP  I+C  EP LQIGY  +   E  + + + 
Sbjct: 181 NCRSAIQDSWVHGT---VVSGGRVLNAQPPPDIDC--EPTLQIGYYQFVRPEAANPRSNG 240

Query: 241 --MTCETNFIQGW 245
                  NF+ GW
Sbjct: 241 GGGDQNNNFVMGW 247

[Close]

BLAST of Clc06G00270 vs. ExPASy Swiss-Prot
Match: Q38837 (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana OX=3702 GN=AGL13 PE=2 SV=2)

HSP 1 Score: 234.2 bits (596), Expect = 1.6e-60
Identity = 139/247 (56.28%), Postives = 174/247 (70.45%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60
           MGRG+VE+KRIENKI RQVTFSKR++GLLKKAYELSVLCDAEV+LIIFST GKLYEF + 
Sbjct: 1   MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNV 60

Query: 61  GTTKTLERYQRCCFSPQHNYAERQTQNWFQEISKLKAKYESLCRTHSRHLLGEDLGPLSV 120
           G  +T+ERY RC  +   N     TQ   QE++KLK KYESL RTH R+L+GEDL  +S+
Sbjct: 61  GVGRTIERYYRCKDNLLDNDTLEDTQGLRQEVTKLKCKYESLLRTH-RNLVGEDLEGMSI 120

Query: 121 KELQNLEKQLEAALAQARQRKTQIMIEQMEDLRRKERQLGDLNRELKLKLEAEGQNLTAI 180
           KELQ LE+QLE AL+  R++KTQ+M+EQME+LRRKER+LGD+N   KLKLE E  +    
Sbjct: 121 KELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINN--KLKLETEDHDFKGF 180

Query: 181 QSFWSSGSGSAEHANNFPLHPLPPNPI-ECQHEPVLQIGYQNYFSE-EGPSVQKS---MT 240
           Q    +   +A  + +F L     N I +C     LQIG+Q ++ + EG SV KS     
Sbjct: 181 QDLLLNPVLTAGCSTDFSLQSTHQNYISDCNLGYFLQIGFQQHYEQGEGSSVTKSNARSD 240

Query: 241 CETNFIQ 243
            ETNF+Q
Sbjct: 241 AETNFVQ 244

[Close]

BLAST of Clc06G00270 vs. ExPASy TrEMBL
Match: A0A0A0KCU5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G076710 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 1.3e-118
Identity = 223/248 (89.92%), Postives = 236/248 (95.16%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA
Sbjct: 64  MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 123

Query: 61  GTTKTLERYQRCCFSPQHNYAERQTQNWFQEISKLKAKYESLCRTHSRHLLGEDLGPLSV 120
           GT+KTLERYQRCCFSPQHN+AER+TQNWFQEISKLKAKYESLCRTH RHLLGEDLGPLSV
Sbjct: 124 GTSKTLERYQRCCFSPQHNFAERETQNWFQEISKLKAKYESLCRTH-RHLLGEDLGPLSV 183

Query: 121 KELQNLEKQLEAALAQARQRKTQIMIEQMEDLRRKERQLGDLNRELKLKLEAEGQNLTAI 180
           KELQNLEKQLEAAL+QARQRKTQIMIEQME+LR+KERQLG LNRELKLKLEAEGQN+  I
Sbjct: 184 KELQNLEKQLEAALSQARQRKTQIMIEQMENLRKKERQLGILNRELKLKLEAEGQNVRGI 243

Query: 181 QSFWSSGSGSAEHANNFPL-HPLPPNPIECQHEPVLQIGYQNYFSEEGPS-VQKSMTCET 240
           +SFWS GSGS    NNFPL HPL P+PI+CQH+P+LQIGYQNYFSEEGPS VQK+MTCET
Sbjct: 244 ESFWSCGSGSGHPNNNFPLHHPLQPDPIDCQHQPLLQIGYQNYFSEEGPSHVQKTMTCET 303

Query: 241 NFIQGWVI 247
           NFIQGWVI
Sbjct: 304 NFIQGWVI 310

[Close]

BLAST of Clc06G00270 vs. ExPASy TrEMBL
Match: A0A1S3CBY8 (agamous-like MADS-box protein AGL6 OS=Cucumis melo OX=3656 GN=LOC103499043 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 3.3e-117
Identity = 223/250 (89.20%), Postives = 236/250 (94.40%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQHNYAERQTQNWFQEISKLKAKYESLCRTHSRHLLGEDLGPLSV 120
           GT+KTLERYQRCCFSPQHN+AER+TQNWFQEISKLKAKYESLCRTH RHLLGEDLGPLSV
Sbjct: 61  GTSKTLERYQRCCFSPQHNFAERETQNWFQEISKLKAKYESLCRTH-RHLLGEDLGPLSV 120

Query: 121 KELQNLEKQLEAALAQARQRKTQIMIEQMEDLRRKERQLGDLNRELKLKLEAEGQNLTAI 180
           KELQNLEKQLEAAL+QARQRKTQIMIEQMEDLR+KE QLG+LNRELKLKLEAEGQN+  I
Sbjct: 121 KELQNLEKQLEAALSQARQRKTQIMIEQMEDLRKKELQLGNLNRELKLKLEAEGQNVRGI 180

Query: 181 QSFWS--SGSGSAEHANNFPL-HPLPPNPIECQHEPVLQIGYQNYFSEEGPS-VQKSMTC 240
           +SFWS  SGS S    NNFPL HPL P+PI+CQH+P+LQIGYQNYFSEEGPS VQK+MTC
Sbjct: 181 ESFWSCASGSASGHPNNNFPLHHPLQPDPIDCQHQPLLQIGYQNYFSEEGPSHVQKTMTC 240

Query: 241 ETNFIQGWVI 247
           ETNFIQGWVI
Sbjct: 241 ETNFIQGWVI 249

[Close]

BLAST of Clc06G00270 vs. ExPASy TrEMBL
Match: A0A6J1CZ22 (agamous-like MADS-box protein AGL6 OS=Momordica charantia OX=3673 GN=LOC111015502 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 3.4e-114
Identity = 220/248 (88.71%), Postives = 230/248 (92.74%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQHNYAERQTQNWFQEISKLKAKYESLCRTHSRHLLGEDLGPLSV 120
           GTTKTLERYQRCCFSPQ N+ ERQTQ+WFQEISKLK KYESLCRT  RHLLGEDLGPLSV
Sbjct: 61  GTTKTLERYQRCCFSPQDNHIERQTQSWFQEISKLKVKYESLCRT-QRHLLGEDLGPLSV 120

Query: 121 KELQNLEKQLEAALAQARQRKTQIMIEQMEDLRRKERQLGDLNRELKLKLEAEGQNLTAI 180
           KELQNLEKQLEAALAQARQRKTQ+MIEQME LRRKERQLGDLN+EL+LKLEAEGQNL AI
Sbjct: 121 KELQNLEKQLEAALAQARQRKTQMMIEQMEALRRKERQLGDLNKELRLKLEAEGQNLKAI 180

Query: 181 QSFWSSGSGSAEHANNFPLHPLPPNPIECQHE-PVLQIGYQNYFSEEGPSVQKSM-TCET 240
           QSFWSS S +A H N+FPLH    +PIECQHE PVLQIGYQNYFS EGPSV+KSM TCET
Sbjct: 181 QSFWSSSSAAAGHGNDFPLHHSQASPIECQHEQPVLQIGYQNYFSAEGPSVRKSMTTCET 240

Query: 241 NFIQGWVI 247
           NFIQGWVI
Sbjct: 241 NFIQGWVI 247

[Close]

BLAST of Clc06G00270 vs. ExPASy TrEMBL
Match: Q1KTF3 (AGAMOUS LIKE6-like protein OS=Momordica charantia OX=3673 GN=AG6 PE=2 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 7.6e-114
Identity = 219/248 (88.31%), Postives = 230/248 (92.74%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQHNYAERQTQNWFQEISKLKAKYESLCRTHSRHLLGEDLGPLSV 120
           GTTKTLERYQRCCFSPQ N+ ERQTQ+WFQEISKLK KYESLCRT  RHLLGEDLGPLSV
Sbjct: 61  GTTKTLERYQRCCFSPQDNHIERQTQSWFQEISKLKVKYESLCRT-QRHLLGEDLGPLSV 120

Query: 121 KELQNLEKQLEAALAQARQRKTQIMIEQMEDLRRKERQLGDLNRELKLKLEAEGQNLTAI 180
           KELQNLEKQLEAALAQARQRKTQ+MI+QME LRRKERQLGDLN+EL+LKLEAEGQNL AI
Sbjct: 121 KELQNLEKQLEAALAQARQRKTQMMIDQMEALRRKERQLGDLNKELRLKLEAEGQNLKAI 180

Query: 181 QSFWSSGSGSAEHANNFPLHPLPPNPIECQHE-PVLQIGYQNYFSEEGPSVQKSM-TCET 240
           QSFWSS S +A H N+FPLH    +PIECQHE PVLQIGYQNYFS EGPSV+KSM TCET
Sbjct: 181 QSFWSSSSAAAGHGNDFPLHHSQASPIECQHEQPVLQIGYQNYFSAEGPSVRKSMTTCET 240

Query: 241 NFIQGWVI 247
           NFIQGWVI
Sbjct: 241 NFIQGWVI 247

[Close]

BLAST of Clc06G00270 vs. ExPASy TrEMBL
Match: A0A6J1KE81 (MADS-box transcription factor 6 OS=Cucurbita maxima OX=3661 GN=LOC111494193 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 6.2e-108
Identity = 206/230 (89.57%), Postives = 215/230 (93.48%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQHNYAERQTQNWFQEISKLKAKYESLCRTHSRHLLGEDLGPLSV 120
           GTTKTLERYQRCCFSPQ NY+ER++QNWF EISKLKAKYESLCRTH RHLLGEDLGPLSV
Sbjct: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTH-RHLLGEDLGPLSV 120

Query: 121 KELQNLEKQLEAALAQARQRKTQIMIEQMEDLRRKERQLGDLNRELKLKLEAEGQNLTAI 180
           KELQNLEKQLEAALAQARQRKTQ+M EQMEDLRRKERQLGDLNRELKLKLE EGQNL AI
Sbjct: 121 KELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAI 180

Query: 181 QSFWSSGSGSAEHANNFPLHPLPPNPIECQHEPVLQIGYQNYFSEEGPSV 231
           QSFWSS S +AEH N FPL+P   + IE QHEP+LQIGYQNYFSEEGPSV
Sbjct: 181 QSFWSSSSSAAEHGNTFPLYPSQASTIEYQHEPILQIGYQNYFSEEGPSV 229

[Close]

BLAST of Clc06G00270 vs. TAIR 10
Match: AT2G45650.1 (AGAMOUS-like 6 )

HSP 1 Score: 298.9 bits (764), Expect = 3.7e-81
Identity = 164/253 (64.82%), Postives = 194/253 (76.68%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60
           MGRGRVE+KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFGS 
Sbjct: 1   MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSV 60

Query: 61  GTTKTLERYQRCC-FSPQHNYAERQTQNWFQEISKLKAKYESLCRTHSRHLLGEDLGPLS 120
           G   T+ERY RC   S  +N  E  TQ+W QE++KLK+KYESL RT +R+LLGEDLG + 
Sbjct: 61  GIESTIERYNRCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRT-NRNLLGEDLGEMG 120

Query: 121 VKELQNLEKQLEAALAQARQRKTQIMIEQMEDLRRKERQLGDLNRELKLKLEAEGQNLTA 180
           VKELQ LE+QLEAAL   RQRKTQ+M+E+MEDLR+KERQLGD+N++LK+K E EG     
Sbjct: 121 VKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKFETEGHAFKT 180

Query: 181 IQSFWSSGSGS-AEHANN--FPLHPLPPNPIECQHEPVLQIGYQN--YFSEEGPSVQKS- 240
            Q  W++ + S A   NN  FP+ P  PN ++C  EP LQIG+Q   Y   EG SV KS 
Sbjct: 181 FQDLWANSAASVAGDPNNSEFPVEPSHPNVLDCNTEPFLQIGFQQHYYVQGEGSSVSKSN 240

Query: 241 MTCETNFIQGWVI 247
           +  ETNF+QGWV+
Sbjct: 241 VAGETNFVQGWVL 252

[Close]

BLAST of Clc06G00270 vs. TAIR 10
Match: AT3G61120.1 (AGAMOUS-like 13 )

HSP 1 Score: 234.2 bits (596), Expect = 1.1e-61
Identity = 139/247 (56.28%), Postives = 174/247 (70.45%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60
           MGRG+VE+KRIENKI RQVTFSKR++GLLKKAYELSVLCDAEV+LIIFST GKLYEF + 
Sbjct: 1   MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNV 60

Query: 61  GTTKTLERYQRCCFSPQHNYAERQTQNWFQEISKLKAKYESLCRTHSRHLLGEDLGPLSV 120
           G  +T+ERY RC  +   N     TQ   QE++KLK KYESL RTH R+L+GEDL  +S+
Sbjct: 61  GVGRTIERYYRCKDNLLDNDTLEDTQGLRQEVTKLKCKYESLLRTH-RNLVGEDLEGMSI 120

Query: 121 KELQNLEKQLEAALAQARQRKTQIMIEQMEDLRRKERQLGDLNRELKLKLEAEGQNLTAI 180
           KELQ LE+QLE AL+  R++KTQ+M+EQME+LRRKER+LGD+N   KLKLE E  +    
Sbjct: 121 KELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINN--KLKLETEDHDFKGF 180

Query: 181 QSFWSSGSGSAEHANNFPLHPLPPNPI-ECQHEPVLQIGYQNYFSE-EGPSVQKS---MT 240
           Q    +   +A  + +F L     N I +C     LQIG+Q ++ + EG SV KS     
Sbjct: 181 QDLLLNPVLTAGCSTDFSLQSTHQNYISDCNLGYFLQIGFQQHYEQGEGSSVTKSNARSD 240

Query: 241 CETNFIQ 243
            ETNF+Q
Sbjct: 241 AETNFVQ 244

[Close]

BLAST of Clc06G00270 vs. TAIR 10
Match: AT5G15800.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 208.8 bits (530), Expect = 5.1e-54
Identity = 127/258 (49.22%), Postives = 172/258 (66.67%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEF-GS 60
           MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEF  S
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  AGTTKTLERYQRCCFS--PQHNYAERQTQNWFQEISKLKAKYESLCRTHSRHLLGEDLGP 120
           +   KTL+RYQ+C +     +N   ++ +N ++E  KLK +YE+L R   R+LLGEDLGP
Sbjct: 61  SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQR-QQRNLLGEDLGP 120

Query: 121 LSVKELQNLEKQLEAALAQARQRKTQIMIEQMEDLRRKERQLGDLNRELKLKLEAEGQNL 180
           L+ KEL+ LE+QL+ +L Q R  KTQ M++Q+ DL+ KE+ L + NR L +KL+    ++
Sbjct: 121 LNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLD----DM 180

Query: 181 TAIQSF-------WSSGSGSAEHANNFPLHPLPPNPIECQHEPVLQIGYQN-YFSEEGPS 240
             ++S        W  G  +  +A++         P+EC   P LQ+GY N   SE+  +
Sbjct: 181 IGVRSHHMGGGGGWEGGEQNVTYAHHQAQSQGLYQPLEC--NPTLQMGYDNPVCSEQITA 240

Query: 241 VQKSMTCETN-FIQGWVI 247
             ++   + N +I GW++
Sbjct: 241 TTQAQAQQGNGYIPGWML 251

[Close]

BLAST of Clc06G00270 vs. TAIR 10
Match: AT1G24260.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 206.8 bits (525), Expect = 1.9e-53
Identity = 131/258 (50.78%), Postives = 172/258 (66.67%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEF-GS 60
           MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEF  S
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  AGTTKTLERYQRCCF-SPQHNYAERQT---QNWFQEISKLKAKYESLCRTHSRHLLGEDL 120
           +   +TLERYQ+C + +P+ N   R+     +  QE  KLK +Y++L RT  R+LLGEDL
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAELSSQQEYLKLKERYDALQRT-QRNLLGEDL 120

Query: 121 GPLSVKELQNLEKQLEAALAQARQRKTQIMIEQMEDLRRKERQLGDLNRELKLKLEAEG- 180
           GPLS KEL++LE+QL+++L Q R  +TQ M++Q+ DL+ KER L + N+ L+L+L A+G 
Sbjct: 121 GPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRL-ADGY 180

Query: 181 -------QNLTAIQSFWSSGSGSAEHANNFPLHPLPPNPIECQHEPVLQIGYQNYFSEEG 240
                   N   +  +        +H+  F        P+EC  EP+LQIGYQ    ++G
Sbjct: 181 QMPLQLNPNQEEVDHYGRHHHQQQQHSQAF------FQPLEC--EPILQIGYQG--QQDG 240

Query: 241 PSVQKSMTCETNFIQGWV 246
                S+    N++ GW+
Sbjct: 241 MGAGPSV---NNYMLGWL 243

[Close]

BLAST of Clc06G00270 vs. TAIR 10
Match: AT1G24260.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 206.5 bits (524), Expect = 2.5e-53
Identity = 131/259 (50.58%), Postives = 172/259 (66.41%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEF-GS 60
           MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEF  S
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  AGTTKTLERYQRCCF-SPQHNYAERQT----QNWFQEISKLKAKYESLCRTHSRHLLGED 120
           +   +TLERYQ+C + +P+ N   R+      +  QE  KLK +Y++L RT  R+LLGED
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRT-QRNLLGED 120

Query: 121 LGPLSVKELQNLEKQLEAALAQARQRKTQIMIEQMEDLRRKERQLGDLNRELKLKLEAEG 180
           LGPLS KEL++LE+QL+++L Q R  +TQ M++Q+ DL+ KER L + N+ L+L+L A+G
Sbjct: 121 LGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRL-ADG 180

Query: 181 --------QNLTAIQSFWSSGSGSAEHANNFPLHPLPPNPIECQHEPVLQIGYQNYFSEE 240
                    N   +  +        +H+  F        P+EC  EP+LQIGYQ    ++
Sbjct: 181 YQMPLQLNPNQEEVDHYGRHHHQQQQHSQAF------FQPLEC--EPILQIGYQG--QQD 240

Query: 241 GPSVQKSMTCETNFIQGWV 246
           G     S+    N++ GW+
Sbjct: 241 GMGAGPSV---NNYMLGWL 244

The following BLAST results are available for this feature:

BLAST of Clc06G00270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877325.1	2.0e-124	94.33	agamous-like MADS-box protein MADS3 isoform X1 [Benincasa hispida]	[more]
XP_011656687.1	2.8e-118	89.92	agamous-like MADS-box protein MADS3 [Cucumis sativus] >XP_011656689.1 agamous-li...	[more]
XP_008460143.1	6.8e-117	89.20	PREDICTED: agamous-like MADS-box protein AGL6 [Cucumis melo] >XP_008460144.1 PRE...	[more]
XP_022146242.1	7.0e-114	88.71	agamous-like MADS-box protein AGL6 [Momordica charantia]	[more]
ABE03878.1	1.6e-113	88.31	AGAMOUS LIKE6-like protein [Momordica charantia]	[more]

BLAST of Clc06G00270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LLR1	1.3e-102	78.46	Agamous-like MADS-box protein MADS3 OS=Vitis vinifera OX=29760 GN=MADS3 PE=2 SV=...	[more]
P29386	5.3e-80	64.82	Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana OX=3702 GN=AGL6 PE=1 ...	[more]
Q6EU39	3.8e-78	66.14	MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS...	[more]
Q7XUN2	1.5e-71	61.26	MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]
Q38837	1.6e-60	56.28	Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana OX=3702 GN=AGL13 PE=...	[more]

BLAST of Clc06G00270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCU5	1.3e-118	89.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G076710 PE=4 SV=1	[more]
A0A1S3CBY8	3.3e-117	89.20	agamous-like MADS-box protein AGL6 OS=Cucumis melo OX=3656 GN=LOC103499043 PE=4 ...	[more]
A0A6J1CZ22	3.4e-114	88.71	agamous-like MADS-box protein AGL6 OS=Momordica charantia OX=3673 GN=LOC11101550...	[more]
Q1KTF3	7.6e-114	88.31	AGAMOUS LIKE6-like protein OS=Momordica charantia OX=3673 GN=AG6 PE=2 SV=1	[more]
A0A6J1KE81	6.2e-108	89.57	MADS-box transcription factor 6 OS=Cucurbita maxima OX=3661 GN=LOC111494193 PE=4...	[more]

BLAST of Clc06G00270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45650.1	3.7e-81	64.82	AGAMOUS-like 6	[more]
AT3G61120.1	1.1e-61	56.28	AGAMOUS-like 13	[more]
AT5G15800.1	5.1e-54	49.22	K-box region and MADS-box transcription factor family protein	[more]
AT1G24260.1	1.9e-53	50.78	K-box region and MADS-box transcription factor family protein	[more]
AT1G24260.2	2.5e-53	50.58	K-box region and MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 120..172
None	No IPR available	PANTHER	PTHR11945:SF485	MADS-BOX TRANSCRIPTION FACTOR 17	coord: 1..230
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 1..230
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 38..59 score: 66.71 coord: 23..38 score: 86.34 coord: 3..23 score: 70.67
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 1.5E-40 score: 150.7
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 7.4E-27 score: 92.7
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 33.403084
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..83 e-value: 3.3E-28 score: 99.3
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..92
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 82..170 e-value: 6.5E-27 score: 93.6
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 85..176 score: 15.171924
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..72 e-value: 6.37193E-45 score: 143.462

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G00270.2	Clc06G00270.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009908	flower development
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)+] activity
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding