Clc05G28200 (gene) Watermelon (cordophanus) v2

Overview
NameClc05G28200
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionsufE-like protein 2, chloroplastic isoform X1
LocationClcChr05: 35303401 .. 35304307 (-)
RNA-Seq ExpressionClc05G28200
SyntenyClc05G28200
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTGAATTGATCCTAGCGATGGCCAAATATAAAGTCCCGCCAAGCAACCGAAGGCGCTCGAACTCGCGTAGGAGCAAATTTGGCTGGTACATTGATGATCTCTAATTGACTATTCCTTCTATTGATTCTTTCTTGTAACTAGATCTTTCCTTTTCCTGTGTTGGTTTCTGCTTTAACCAAACAAGCATGAGTTTCACATCCATCCAAAATGCTTCTCCATACTGTAACTGCTTCACGAAATCCTCATATCGCTACAATCCTCCTCCTACTATTGCATTTCAATTGAAACGCGTGATTAGGAATGGGGAACTAATTTTCCCGTTCAAGTCTCGGAGATGCATTCGAGATTACAAATCTGAATCAATTTCCTCGACGATAATGCGAAAACTTAGGGCAATGAAACCTGAACTCGTCGCGAACAAGCTTAAACGGTTGGTTGGTGAATTCAAGTCCCTGAAGGAGCCGATTGATCGACTGAAGAGGCTACTGCATTACGCTACGCTTCTTGCTCCAATGGATGATTCGGCTCGGGTGGATGGAAACAGAGTGGCGGGATGTACGACTGAGGTATGGTTGGAAGTGAAAATGGATGATAATGGAAGGATGAGATTCAAAGCGGACAGCGATTCAGAGATTACGAAGGGATTCTGTTCTTGCTTGATATGGTTGTTGGATGGGGCGGAGGCTGCGGAGGTTATGGCGGTGGAGGTTGAGGATTTGGAGGCCGTGAATTTGGGATTTGAAATGAAGGTGAGATCCAGAGTTAATACTTGGCAAAATGTGCTGATTAGTATGCAGAAAAGAACTAGTGATTTAATTTTAGAGAAAAATGGAGAATCGCCTTAGGAGTTCTTCCTTCTCATTGTTCTTACAAGGTAATGAATGAACTCATAAACATGGAAACCTT

mRNA sequence

GTTGAATTGATCCTAGCGATGGCCAAATATAAAGTCCCGCCAAGCAACCGAAGGCGCTCGAACTCGCGTAGGAGCAAATTTGGCTGGTACATTGATGATCTCTAATTGACTATTCCTTCTATTGATTCTTTCTTGTAACTAGATCTTTCCTTTTCCTGTGTTGGTTTCTGCTTTAACCAAACAAGCATGAGTTTCACATCCATCCAAAATGCTTCTCCATACTGTAACTGCTTCACGAAATCCTCATATCGCTACAATCCTCCTCCTACTATTGCATTTCAATTGAAACGCGTGATTAGGAATGGGGAACTAATTTTCCCGTTCAAGTCTCGGAGATGCATTCGAGATTACAAATCTGAATCAATTTCCTCGACGATAATGCGAAAACTTAGGGCAATGAAACCTGAACTCGTCGCGAACAAGCTTAAACGGTTGGTTGGTGAATTCAAGTCCCTGAAGGAGCCGATTGATCGACTGAAGAGGCTACTGCATTACGCTACGCTTCTTGCTCCAATGGATGATTCGGCTCGGGTGGATGGAAACAGAGTGGCGGGATGTACGACTGAGGTATGGTTGGAAGTGAAAATGGATGATAATGGAAGGATGAGATTCAAAGCGGACAGCGATTCAGAGATTACGAAGGGATTCTGTTCTTGCTTGATATGGTTGTTGGATGGGGCGGAGGCTGCGGAGGTTATGGCGGTGGAGGTTGAGGATTTGGAGGCCGTGAATTTGGGATTTGAAATGAAGGTGAGATCCAGAGTTAATACTTGGCAAAATGTGCTGATTAGTATGCAGAAAAGAACTAGTGATTTAATTTTAGAGAAAAATGGAGAATCGCCTTAGGAGTTCTTCCTTCTCATTGTTCTTACAAGGTAATGAATGAACTCATAAACATGGAAACCTT

Coding sequence (CDS)

ATGAGTTTCACATCCATCCAAAATGCTTCTCCATACTGTAACTGCTTCACGAAATCCTCATATCGCTACAATCCTCCTCCTACTATTGCATTTCAATTGAAACGCGTGATTAGGAATGGGGAACTAATTTTCCCGTTCAAGTCTCGGAGATGCATTCGAGATTACAAATCTGAATCAATTTCCTCGACGATAATGCGAAAACTTAGGGCAATGAAACCTGAACTCGTCGCGAACAAGCTTAAACGGTTGGTTGGTGAATTCAAGTCCCTGAAGGAGCCGATTGATCGACTGAAGAGGCTACTGCATTACGCTACGCTTCTTGCTCCAATGGATGATTCGGCTCGGGTGGATGGAAACAGAGTGGCGGGATGTACGACTGAGGTATGGTTGGAAGTGAAAATGGATGATAATGGAAGGATGAGATTCAAAGCGGACAGCGATTCAGAGATTACGAAGGGATTCTGTTCTTGCTTGATATGGTTGTTGGATGGGGCGGAGGCTGCGGAGGTTATGGCGGTGGAGGTTGAGGATTTGGAGGCCGTGAATTTGGGATTTGAAATGAAGGTGAGATCCAGAGTTAATACTTGGCAAAATGTGCTGATTAGTATGCAGAAAAGAACTAGTGATTTAATTTTAGAGAAAAATGGAGAATCGCCTTAG

Protein sequence

MSFTSIQNASPYCNCFTKSSYRYNPPPTIAFQLKRVIRNGELIFPFKSRRCIRDYKSESISSTIMRKLRAMKPELVANKLKRLVGEFKSLKEPIDRLKRLLHYATLLAPMDDSARVDGNRVAGCTTEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWLLDGAEAAEVMAVEVEDLEAVNLGFEMKVRSRVNTWQNVLISMQKRTSDLILEKNGESP
Homology
BLAST of Clc05G28200 vs. NCBI nr
Match: KAG6573699.1 (SufE-like protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 297.4 bits (760), Expect = 1.0e-76
Identity = 159/224 (70.98%), Postives = 184/224 (82.14%), Query Frame = 0

Query: 2   SFTSIQNASPYCNCFTKSSYRYNPPPTIAFQLKRVIRNGELIFPFKSRRCIR----DYKS 61
           S TS +NASPY NCF+KSS RYN    I +Q K VIRN +  F FKS +CIR    D  S
Sbjct: 3   SITSFRNASPYYNCFSKSSKRYN-RSNIEYQSKLVIRNVK-YFQFKSLKCIRYCDCDSNS 62

Query: 62  ESISSTIMR--KLRAMKPELVANKLKRLVGEFKSLKEPIDRLKRLLHYATLLAPMDDSAR 121
           +S SS IMR  K   M PELVA+KL+RLV EF++L++PIDR+KRLLHYAT LAPMD+SAR
Sbjct: 63  DSSSSMIMRSQKPSGMIPELVADKLERLVSEFEALEKPIDRVKRLLHYATFLAPMDESAR 122

Query: 122 VDGNRVAGCTTEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWLLDGAEAAEVMAVEV 181
           V  NRVAGCT EVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIW+L+GAEA+EV+AV++
Sbjct: 123 VSENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKI 182

Query: 182 EDLEAVNLGFEMKVRSRVNTWQNVLISMQKRTSDLILEKNGESP 220
           EDL A+NLG  +K +SRVNTWQNVLISMQ+RTSDL+ EKNGESP
Sbjct: 183 EDLAAMNLGSPIKAQSRVNTWQNVLISMQQRTSDLVSEKNGESP 224

BLAST of Clc05G28200 vs. NCBI nr
Match: XP_023542315.1 (sufE-like protein 2, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 296.2 bits (757), Expect = 2.3e-76
Identity = 159/224 (70.98%), Postives = 185/224 (82.59%), Query Frame = 0

Query: 2   SFTSIQNASPYCNCFTKSSYRYNPPPTIAFQLKRVIRNGELIFPFKSRRCIR----DYKS 61
           S TS +NASPY NCF+KSS RYN   +I +Q K VIRN +  F FKS +CIR    D  S
Sbjct: 3   SITSFRNASPYYNCFSKSSKRYN-RSSIEYQSKLVIRNVK-YFRFKSLKCIRYCDSDSDS 62

Query: 62  ESISSTIMR--KLRAMKPELVANKLKRLVGEFKSLKEPIDRLKRLLHYATLLAPMDDSAR 121
           +S SS IMR  K   M PELVA+KL+RLV EF++L++PIDR+KRLLHYAT LAPMD+SAR
Sbjct: 63  DSSSSMIMRSQKPSGMIPELVADKLERLVSEFEALEKPIDRVKRLLHYATFLAPMDESAR 122

Query: 122 VDGNRVAGCTTEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWLLDGAEAAEVMAVEV 181
           V  NRVAGCT EVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIW+L+GAEA+EV+AV++
Sbjct: 123 VSENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKI 182

Query: 182 EDLEAVNLGFEMKVRSRVNTWQNVLISMQKRTSDLILEKNGESP 220
           EDL A+NLG  +K +SRVNTWQNVLISMQ+RTSDL+ EKNGESP
Sbjct: 183 EDLAAMNLGPPIKAQSRVNTWQNVLISMQQRTSDLVSEKNGESP 224

BLAST of Clc05G28200 vs. NCBI nr
Match: XP_022966843.1 (sufE-like protein 2, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 295.8 bits (756), Expect = 3.0e-76
Identity = 159/222 (71.62%), Postives = 182/222 (81.98%), Query Frame = 0

Query: 4   TSIQNASPYCNCFTKSSYRYNPPPTIAFQLKRVIRNGELIFPFKSRRCIR----DYKSES 63
           TS  NASPY NCFTKSS RYN   +I +Q K VIRN +  F FKS +CIR    D  S+S
Sbjct: 5   TSFGNASPYYNCFTKSSKRYN-RSSIEYQSKLVIRNVK-YFRFKSLKCIRYCDSDSDSDS 64

Query: 64  ISSTIMR--KLRAMKPELVANKLKRLVGEFKSLKEPIDRLKRLLHYATLLAPMDDSARVD 123
            SS IMR  K  AM PELVA+KL+RLV EF++L++PIDR+KRLLHYAT LAPMD SA V 
Sbjct: 65  SSSMIMRSQKPSAMIPELVADKLERLVSEFEALEKPIDRVKRLLHYATFLAPMDKSALVS 124

Query: 124 GNRVAGCTTEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWLLDGAEAAEVMAVEVED 183
           GNRVAGCT EVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIW+++GAEA EV+AV++ED
Sbjct: 125 GNRVAGCTVEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWMMNGAEATEVLAVKIED 184

Query: 184 LEAVNLGFEMKVRSRVNTWQNVLISMQKRTSDLILEKNGESP 220
           L A+NLG  +K +SRVNTWQNVLISMQ+RTSDL+ EKNGESP
Sbjct: 185 LAALNLGSPIKAQSRVNTWQNVLISMQQRTSDLVSEKNGESP 224

BLAST of Clc05G28200 vs. NCBI nr
Match: KAG7012775.1 (SufE-like protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 295.8 bits (756), Expect = 3.0e-76
Identity = 158/224 (70.54%), Postives = 184/224 (82.14%), Query Frame = 0

Query: 2   SFTSIQNASPYCNCFTKSSYRYNPPPTIAFQLKRVIRNGELIFPFKSRRCIR----DYKS 61
           S TS +NASPY NCF+KSS RYN    I +Q K VIRN +  F FKS +CIR    D  S
Sbjct: 3   SITSFRNASPYYNCFSKSSKRYN-RSNIEYQSKLVIRNVK-YFRFKSLKCIRYCDSDSNS 62

Query: 62  ESISSTIMR--KLRAMKPELVANKLKRLVGEFKSLKEPIDRLKRLLHYATLLAPMDDSAR 121
           +S SS IMR  K   M PELVA+KL+RLV EF++L++PIDR+K+LLHYAT LAPMD+SAR
Sbjct: 63  DSSSSMIMRSQKPSGMIPELVADKLERLVSEFEALEKPIDRVKKLLHYATFLAPMDESAR 122

Query: 122 VDGNRVAGCTTEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWLLDGAEAAEVMAVEV 181
           V  NRVAGCT EVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIW+L+GAEA+EV+AV++
Sbjct: 123 VSENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKI 182

Query: 182 EDLEAVNLGFEMKVRSRVNTWQNVLISMQKRTSDLILEKNGESP 220
           EDL A+NLG  +K +SRVNTWQNVLISMQ+RTSDL+ EKNGESP
Sbjct: 183 EDLAAMNLGSPIKAQSRVNTWQNVLISMQQRTSDLVSEKNGESP 224

BLAST of Clc05G28200 vs. NCBI nr
Match: XP_022945584.1 (sufE-like protein 2, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 292.0 bits (746), Expect = 4.4e-75
Identity = 156/224 (69.64%), Postives = 183/224 (81.70%), Query Frame = 0

Query: 2   SFTSIQNASPYCNCFTKSSYRYNPPPTIAFQLKRVIRNGELIFPFKSRRCIR----DYKS 61
           S TS +NASPY NCF+KSS RYN    I +Q K VI N +  F FKS +CIR    D  S
Sbjct: 3   SITSFRNASPYYNCFSKSSKRYN-RSNIEYQSKLVIGNVK-YFRFKSLKCIRYCDSDSNS 62

Query: 62  ESISSTIMR--KLRAMKPELVANKLKRLVGEFKSLKEPIDRLKRLLHYATLLAPMDDSAR 121
           +S SS IMR  K   M PELVA+KL+RLV EF++L++PIDR+K+LLHYAT L+PMD+SAR
Sbjct: 63  DSSSSMIMRSQKPSGMIPELVADKLERLVSEFEALEKPIDRVKKLLHYATFLSPMDESAR 122

Query: 122 VDGNRVAGCTTEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWLLDGAEAAEVMAVEV 181
           V  NRVAGCT EVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIW+L+GAEA+EV+AV++
Sbjct: 123 VSENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKI 182

Query: 182 EDLEAVNLGFEMKVRSRVNTWQNVLISMQKRTSDLILEKNGESP 220
           EDL A+NLG  +K +SRVNTWQNVLISMQ+RTSDL+ EKNGESP
Sbjct: 183 EDLAAMNLGSPIKAQSRVNTWQNVLISMQQRTSDLVSEKNGESP 224

BLAST of Clc05G28200 vs. ExPASy Swiss-Prot
Match: Q9FXE3 (SufE-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SUFE2 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.8e-48
Identity = 92/135 (68.15%), Postives = 112/135 (82.96%), Query Frame = 0

Query: 77  ANKLKRLVGEFKSLKEPIDRLKRLLHYATLLAPMDDSARVDGNRVAGCTTEVWLEVKMDD 136
           ++KL+ LV EF+SL EPIDR+KRLL+YA  LAP+D+SAR+  NRV GCTT+VWLE+KMD+
Sbjct: 75  SDKLRILVSEFRSLTEPIDRVKRLLNYAATLAPLDESARISENRVTGCTTQVWLEIKMDE 134

Query: 137 NGRMRFKADSDSEITKGFCSCLIWLLDGAEAAEVMAVEVEDLEAVNLGFEMKVRSRVNTW 196
            GRMRFKADSDSEI+KGFCSCLIW+LDGA+  EVM V  EDL  +N+G   K +SRVNTW
Sbjct: 135 FGRMRFKADSDSEISKGFCSCLIWILDGAKPEEVMGVRSEDLSEMNVGVHGKEQSRVNTW 194

Query: 197 QNVLISMQKRTSDLI 212
            NVL+SMQKRT  L+
Sbjct: 195 HNVLMSMQKRTMTLV 209

BLAST of Clc05G28200 vs. ExPASy Swiss-Prot
Match: Q9FGS4 (Quinolinate synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=QS PE=1 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.5e-41
Identity = 86/161 (53.42%), Postives = 113/161 (70.19%), Query Frame = 0

Query: 59  SISSTIMRKLRAMKPELVANKLKRLVGEFKSLKEPIDRLKRLLHYATLLAPMDDSARVDG 118
           SIS+       +   ELV  KL+RLV EFKSL EPIDRLK +LHYA+LL  M +S++ + 
Sbjct: 67  SISAIASSSSSSQTTELVPYKLQRLVKEFKSLTEPIDRLKWVLHYASLLPQMPESSKTES 126

Query: 119 NRVAGCTTEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWLLDGAEAAEVMAVEVEDL 178
           NRV GCT  VWL+ ++  +G+MRF ADSDS+++KG CSCLI +LD A   EVM ++ EDL
Sbjct: 127 NRVMGCTARVWLDAELGQDGKMRFCADSDSDVSKGMCSCLIQVLDEASPVEVMELKTEDL 186

Query: 179 EAVNLGFEMKVRSRVNTWQNVLISMQKRTSDLILEKNGESP 220
             +N+G     RSRVNTW NVL+SMQK+T  L+ E+ G+ P
Sbjct: 187 AELNVGLLGGERSRVNTWYNVLVSMQKKTRRLVAEREGKVP 227

BLAST of Clc05G28200 vs. ExPASy Swiss-Prot
Match: Q2QTL0 (Quinolinate synthase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0290150 PE=3 SV=2)

HSP 1 Score: 114.4 bits (285), Expect = 1.6e-24
Identity = 61/139 (43.88%), Postives = 82/139 (58.99%), Query Frame = 0

Query: 79  KLKRLVGEFKSLKEPIDRLKRLLHYATLLAPMDDSARVDGNRVAGCTTEVWLEVKMDDNG 138
           ++ RL  EF+   +  DR +RLL  A  L  + ++ RV  NRV GC  +VWL  + D  G
Sbjct: 69  RVSRLAEEFRVSPDAADRARRLLARAAALPRLGEADRVAANRVMGCVAQVWLVGRCDGAG 128

Query: 139 RMRFKADSDSEITKGFCSCLIWLLDGAEAAEVMAVEVEDLEAV-NLGFEMKVRSRVNTWQ 198
           RMRF ADSDSE+++G+C+CL+  LDGA   EV+ V+  DL  +         RSR +TW 
Sbjct: 129 RMRFAADSDSELSRGYCACLVSALDGARPEEVLDVDPADLAPLGGAAAGTGARSRASTWH 188

Query: 199 NVLISMQKRTSDLILEKNG 217
           NVLI MQKR    I  + G
Sbjct: 189 NVLIGMQKRARAAIAAREG 207

BLAST of Clc05G28200 vs. ExPASy Swiss-Prot
Match: Q84W65 (SufE-like protein 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SUFE1 PE=1 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 2.9e-13
Identity = 48/140 (34.29%), Postives = 78/140 (55.71%), Query Frame = 0

Query: 79  KLKRLVGEFKSLKEPIDRLKRLLHYATLLAPMDDSARVDGNRVAGCTTEVWLEVKMDDNG 138
           KL+ +V  F+S++EP  + ++L+ Y   L P+D   +   N+V GC ++VW+    D+  
Sbjct: 86  KLQEIVKLFQSVQEPKAKYEQLMFYGKNLTPLDSQFKTRENKVEGCVSQVWVRAFFDEER 145

Query: 139 RMRFKADSDSEITKGFCSCLIWLLDGAEAAEVMAVEVEDLEAVNLGFEMKVR-SRVNTWQ 198
            + ++ADSDS +TKG  + L+  L G    E++ +  +   AV LG +  +  SR N   
Sbjct: 146 NVVYEADSDSVLTKGLAALLVKGLSGRPVPEILRITPD--FAVLLGLQQSLSPSRNNGLL 205

Query: 199 NVLISMQKRTSDLILEKNGE 218
           N+L  MQK+   L LE  GE
Sbjct: 206 NMLKLMQKKA--LHLEVKGE 221

BLAST of Clc05G28200 vs. ExPASy Swiss-Prot
Match: P74523 (Uncharacterized SufE-like protein slr1419 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1419 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.1e-11
Identity = 44/148 (29.73%), Postives = 80/148 (54.05%), Query Frame = 0

Query: 65  MRKLRAMKPELV-AN-----KLKRLVGEFKSLKEPIDRLKRLLHYATLLAPMDDSARVDG 124
           M +L  + P LV AN      L ++V  F+   +P  R ++LL Y   L PM +  ++  
Sbjct: 1   MNRLSIIFPNLVMANATLPPNLAKIVERFQRHTDPKKRYEQLLWYGKKLEPMMEEGKIAA 60

Query: 125 NRVAGCTTEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWLLDGAEAAEVMAVEVEDL 184
           N+V GC ++V++   ++D G++ ++ DSD+++ KG  + LI  L+G    E++ +  + +
Sbjct: 61  NKVQGCVSQVYITADLED-GKVMYQGDSDAQLVKGLVALLIQGLNGLTPTEIVELTPDFI 120

Query: 185 EAVNLGFEMKVRSRVNTWQNVLISMQKR 207
           EA  L   +   SR N + N+   MQ +
Sbjct: 121 EATGLQVSL-TPSRANGFYNIFKMMQTK 146

BLAST of Clc05G28200 vs. ExPASy TrEMBL
Match: A0A6J1HTE4 (sufE-like protein 2, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466428 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.5e-76
Identity = 159/222 (71.62%), Postives = 182/222 (81.98%), Query Frame = 0

Query: 4   TSIQNASPYCNCFTKSSYRYNPPPTIAFQLKRVIRNGELIFPFKSRRCIR----DYKSES 63
           TS  NASPY NCFTKSS RYN   +I +Q K VIRN +  F FKS +CIR    D  S+S
Sbjct: 5   TSFGNASPYYNCFTKSSKRYN-RSSIEYQSKLVIRNVK-YFRFKSLKCIRYCDSDSDSDS 64

Query: 64  ISSTIMR--KLRAMKPELVANKLKRLVGEFKSLKEPIDRLKRLLHYATLLAPMDDSARVD 123
            SS IMR  K  AM PELVA+KL+RLV EF++L++PIDR+KRLLHYAT LAPMD SA V 
Sbjct: 65  SSSMIMRSQKPSAMIPELVADKLERLVSEFEALEKPIDRVKRLLHYATFLAPMDKSALVS 124

Query: 124 GNRVAGCTTEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWLLDGAEAAEVMAVEVED 183
           GNRVAGCT EVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIW+++GAEA EV+AV++ED
Sbjct: 125 GNRVAGCTVEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWMMNGAEATEVLAVKIED 184

Query: 184 LEAVNLGFEMKVRSRVNTWQNVLISMQKRTSDLILEKNGESP 220
           L A+NLG  +K +SRVNTWQNVLISMQ+RTSDL+ EKNGESP
Sbjct: 185 LAALNLGSPIKAQSRVNTWQNVLISMQQRTSDLVSEKNGESP 224

BLAST of Clc05G28200 vs. ExPASy TrEMBL
Match: A0A6J1G1D5 (sufE-like protein 2, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449778 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 2.1e-75
Identity = 156/224 (69.64%), Postives = 183/224 (81.70%), Query Frame = 0

Query: 2   SFTSIQNASPYCNCFTKSSYRYNPPPTIAFQLKRVIRNGELIFPFKSRRCIR----DYKS 61
           S TS +NASPY NCF+KSS RYN    I +Q K VI N +  F FKS +CIR    D  S
Sbjct: 3   SITSFRNASPYYNCFSKSSKRYN-RSNIEYQSKLVIGNVK-YFRFKSLKCIRYCDSDSNS 62

Query: 62  ESISSTIMR--KLRAMKPELVANKLKRLVGEFKSLKEPIDRLKRLLHYATLLAPMDDSAR 121
           +S SS IMR  K   M PELVA+KL+RLV EF++L++PIDR+K+LLHYAT L+PMD+SAR
Sbjct: 63  DSSSSMIMRSQKPSGMIPELVADKLERLVSEFEALEKPIDRVKKLLHYATFLSPMDESAR 122

Query: 122 VDGNRVAGCTTEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWLLDGAEAAEVMAVEV 181
           V  NRVAGCT EVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIW+L+GAEA+EV+AV++
Sbjct: 123 VSENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKI 182

Query: 182 EDLEAVNLGFEMKVRSRVNTWQNVLISMQKRTSDLILEKNGESP 220
           EDL A+NLG  +K +SRVNTWQNVLISMQ+RTSDL+ EKNGESP
Sbjct: 183 EDLAAMNLGSPIKAQSRVNTWQNVLISMQQRTSDLVSEKNGESP 224

BLAST of Clc05G28200 vs. ExPASy TrEMBL
Match: A0A6J1HV05 (sufE-like protein 2, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466428 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 3.9e-61
Identity = 118/149 (79.19%), Postives = 136/149 (91.28%), Query Frame = 0

Query: 71  MKPELVANKLKRLVGEFKSLKEPIDRLKRLLHYATLLAPMDDSARVDGNRVAGCTTEVWL 130
           M PELVA+KL+RLV EF++L++PIDR+KRLLHYAT LAPMD SA V GNRVAGCT EVWL
Sbjct: 1   MIPELVADKLERLVSEFEALEKPIDRVKRLLHYATFLAPMDKSALVSGNRVAGCTVEVWL 60

Query: 131 EVKMDDNGRMRFKADSDSEITKGFCSCLIWLLDGAEAAEVMAVEVEDLEAVNLGFEMKVR 190
           EVKMDDNGRMRFKADSDSEITKGFCSCLIW+++GAEA EV+AV++EDL A+NLG  +K +
Sbjct: 61  EVKMDDNGRMRFKADSDSEITKGFCSCLIWMMNGAEATEVLAVKIEDLAALNLGSPIKAQ 120

Query: 191 SRVNTWQNVLISMQKRTSDLILEKNGESP 220
           SRVNTWQNVLISMQ+RTSDL+ EKNGESP
Sbjct: 121 SRVNTWQNVLISMQQRTSDLVSEKNGESP 149

BLAST of Clc05G28200 vs. ExPASy TrEMBL
Match: A0A6J1G1C5 (sufE-like protein 2, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449778 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 5.1e-61
Identity = 117/149 (78.52%), Postives = 138/149 (92.62%), Query Frame = 0

Query: 71  MKPELVANKLKRLVGEFKSLKEPIDRLKRLLHYATLLAPMDDSARVDGNRVAGCTTEVWL 130
           M PELVA+KL+RLV EF++L++PIDR+K+LLHYAT L+PMD+SARV  NRVAGCT EVWL
Sbjct: 1   MIPELVADKLERLVSEFEALEKPIDRVKKLLHYATFLSPMDESARVSENRVAGCTVEVWL 60

Query: 131 EVKMDDNGRMRFKADSDSEITKGFCSCLIWLLDGAEAAEVMAVEVEDLEAVNLGFEMKVR 190
           EVKMDDNGRMRFKADSDSEITKGFCSCLIW+L+GAEA+EV+AV++EDL A+NLG  +K +
Sbjct: 61  EVKMDDNGRMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKIEDLAAMNLGSPIKAQ 120

Query: 191 SRVNTWQNVLISMQKRTSDLILEKNGESP 220
           SRVNTWQNVLISMQ+RTSDL+ EKNGESP
Sbjct: 121 SRVNTWQNVLISMQQRTSDLVSEKNGESP 149

BLAST of Clc05G28200 vs. ExPASy TrEMBL
Match: A0A6P6GJP9 (sufE-like protein 2, chloroplastic OS=Ziziphus jujuba OX=326968 GN=LOC107428522 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 1.2e-49
Identity = 115/214 (53.74%), Postives = 140/214 (65.42%), Query Frame = 0

Query: 22  RYNPPPTIAFQLKRVIRNGELIFPFKSRRCIRDYKSESISSTIMRKLRAMKPEL------ 81
           RY+   T    LK    N +  F   S + I++Y     S     KL A  P L      
Sbjct: 26  RYDNYETRHSALKFNAENEKNKFLILSLKSIKNY---GFSPKSPSKLHARNPSLPAAVEF 85

Query: 82  ----------VANKLKRLVGEFKSLKEPIDRLKRLLHYATLLAPMDDSARVDGNRVAGCT 141
                     VA+KL+ LV EFKSL EP+DR+KRLLHYA +L P D+SARV  NRV GC 
Sbjct: 86  ERPLETDGLVVADKLQLLVLEFKSLNEPLDRVKRLLHYAAILPPYDESARVAENRVVGCA 145

Query: 142 TEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWLLDGAEAAEVMAVEVEDLEAVNLGF 201
           T+VWLEV+MDD GRMRF+ADSDSEI+KGFCSCLIW+LDGA+  EV  +  EDLE VN+G 
Sbjct: 146 TQVWLEVEMDDLGRMRFRADSDSEISKGFCSCLIWMLDGAKPEEVSEMRAEDLEHVNVGL 205

Query: 202 EMKVRSRVNTWQNVLISMQKRTSDLILEKNGESP 220
            +K  SRVNTWQNVLISMQKRT  L++E+ G++P
Sbjct: 206 YVKANSRVNTWQNVLISMQKRTKALVMERGGKNP 236

BLAST of Clc05G28200 vs. TAIR 10
Match: AT1G67810.1 (sulfur E2 )

HSP 1 Score: 193.4 bits (490), Expect = 2.0e-49
Identity = 92/135 (68.15%), Postives = 112/135 (82.96%), Query Frame = 0

Query: 77  ANKLKRLVGEFKSLKEPIDRLKRLLHYATLLAPMDDSARVDGNRVAGCTTEVWLEVKMDD 136
           ++KL+ LV EF+SL EPIDR+KRLL+YA  LAP+D+SAR+  NRV GCTT+VWLE+KMD+
Sbjct: 75  SDKLRILVSEFRSLTEPIDRVKRLLNYAATLAPLDESARISENRVTGCTTQVWLEIKMDE 134

Query: 137 NGRMRFKADSDSEITKGFCSCLIWLLDGAEAAEVMAVEVEDLEAVNLGFEMKVRSRVNTW 196
            GRMRFKADSDSEI+KGFCSCLIW+LDGA+  EVM V  EDL  +N+G   K +SRVNTW
Sbjct: 135 FGRMRFKADSDSEISKGFCSCLIWILDGAKPEEVMGVRSEDLSEMNVGVHGKEQSRVNTW 194

Query: 197 QNVLISMQKRTSDLI 212
            NVL+SMQKRT  L+
Sbjct: 195 HNVLMSMQKRTMTLV 209

BLAST of Clc05G28200 vs. TAIR 10
Match: AT5G50210.1 (quinolinate synthase )

HSP 1 Score: 170.2 bits (430), Expect = 1.8e-42
Identity = 86/161 (53.42%), Postives = 113/161 (70.19%), Query Frame = 0

Query: 59  SISSTIMRKLRAMKPELVANKLKRLVGEFKSLKEPIDRLKRLLHYATLLAPMDDSARVDG 118
           SIS+       +   ELV  KL+RLV EFKSL EPIDRLK +LHYA+LL  M +S++ + 
Sbjct: 67  SISAIASSSSSSQTTELVPYKLQRLVKEFKSLTEPIDRLKWVLHYASLLPQMPESSKTES 126

Query: 119 NRVAGCTTEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWLLDGAEAAEVMAVEVEDL 178
           NRV GCT  VWL+ ++  +G+MRF ADSDS+++KG CSCLI +LD A   EVM ++ EDL
Sbjct: 127 NRVMGCTARVWLDAELGQDGKMRFCADSDSDVSKGMCSCLIQVLDEASPVEVMELKTEDL 186

Query: 179 EAVNLGFEMKVRSRVNTWQNVLISMQKRTSDLILEKNGESP 220
             +N+G     RSRVNTW NVL+SMQK+T  L+ E+ G+ P
Sbjct: 187 AELNVGLLGGERSRVNTWYNVLVSMQKKTRRLVAEREGKVP 227

BLAST of Clc05G28200 vs. TAIR 10
Match: AT4G26500.1 (chloroplast sulfur E )

HSP 1 Score: 77.0 bits (188), Expect = 2.1e-14
Identity = 48/140 (34.29%), Postives = 78/140 (55.71%), Query Frame = 0

Query: 79  KLKRLVGEFKSLKEPIDRLKRLLHYATLLAPMDDSARVDGNRVAGCTTEVWLEVKMDDNG 138
           KL+ +V  F+S++EP  + ++L+ Y   L P+D   +   N+V GC ++VW+    D+  
Sbjct: 86  KLQEIVKLFQSVQEPKAKYEQLMFYGKNLTPLDSQFKTRENKVEGCVSQVWVRAFFDEER 145

Query: 139 RMRFKADSDSEITKGFCSCLIWLLDGAEAAEVMAVEVEDLEAVNLGFEMKVR-SRVNTWQ 198
            + ++ADSDS +TKG  + L+  L G    E++ +  +   AV LG +  +  SR N   
Sbjct: 146 NVVYEADSDSVLTKGLAALLVKGLSGRPVPEILRITPD--FAVLLGLQQSLSPSRNNGLL 205

Query: 199 NVLISMQKRTSDLILEKNGE 218
           N+L  MQK+   L LE  GE
Sbjct: 206 NMLKLMQKKA--LHLEVKGE 221

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6573699.11.0e-7670.98SufE-like protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. soror... [more]
XP_023542315.12.3e-7670.98sufE-like protein 2, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022966843.13.0e-7671.62sufE-like protein 2, chloroplastic isoform X1 [Cucurbita maxima][more]
KAG7012775.13.0e-7670.54SufE-like protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. argyr... [more]
XP_022945584.14.4e-7569.64sufE-like protein 2, chloroplastic isoform X1 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Q9FXE32.8e-4868.15SufE-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SUFE2 PE=2... [more]
Q9FGS42.5e-4153.42Quinolinate synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=QS PE=1 S... [more]
Q2QTL01.6e-2443.88Quinolinate synthase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=... [more]
Q84W652.9e-1334.29SufE-like protein 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702... [more]
P745236.1e-1129.73Uncharacterized SufE-like protein slr1419 OS=Synechocystis sp. (strain PCC 6803 ... [more]
Match NameE-valueIdentityDescription
A0A6J1HTE41.5e-7671.62sufE-like protein 2, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1G1D52.1e-7569.64sufE-like protein 2, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A6J1HV053.9e-6179.19sufE-like protein 2, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1G1C55.1e-6178.52sufE-like protein 2, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A6P6GJP91.2e-4953.74sufE-like protein 2, chloroplastic OS=Ziziphus jujuba OX=326968 GN=LOC107428522 ... [more]
Match NameE-valueIdentityDescription
AT1G67810.12.0e-4968.15sulfur E2 [more]
AT5G50210.11.8e-4253.42quinolinate synthase [more]
AT4G26500.12.1e-1434.29chloroplast sulfur E [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003808Fe-S metabolism associated domain, SufE-likePFAMPF02657SufEcoord: 86..205
e-value: 1.1E-27
score: 96.3
IPR003808Fe-S metabolism associated domain, SufE-likePANTHERPTHR43597SULFUR ACCEPTOR PROTEIN CSDEcoord: 46..217
NoneNo IPR availableGENE3D3.90.1010.10coord: 62..208
e-value: 1.0E-41
score: 143.8
NoneNo IPR availablePANTHERPTHR43597:SF5SUFE-LIKE PROTEIN 2, CHLOROPLASTICcoord: 46..217
NoneNo IPR availableSUPERFAMILY82649SufE/NifUcoord: 78..213

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc05G28200.1Clc05G28200.1mRNA