Clc05G27430 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G27430
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	RING-type domain-containing protein
Location	ClcChr05: 34730473 .. 34734921 (+)
RNA-Seq Expression	Clc05G27430
Synteny	Clc05G27430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATATTATAATAATTGTGAGAGCAAAGGAATTGGGAAGGTGAAGTGGCAGAGGAGAGGGAGGCGTGGCGGACGGCACGGCGGCGGCGGCTCCGTCCAAATGAAGATGAGAAAGCTGCAGCGGCTGATCCCCGGCGGACGGAGGCTGAAACCGGACCGCTTATTCTTGAAAACTGCTGATTATATAATGCAATTGAGGTCTCAAGTTCATGTTTTGCAAGCACTTTCAAAGATTTATGATCCTAGGCTTTCTAAATATTGATATATCTTTTTTTTTTTTTCTTTTCCTATTTTTCCTTATTTTTTCTGTTTTTCTCAAGTCTTGTATCCAGAAAAAAAAAAAAAAAAAGAATTAATTGGCTTTTTGGCCACCTTCATATAACATACATACACATTATATATATGTATGGGATGATGTATGTATGTATTTAATGTGTAGATATCACATGACTCAATATCTACCACCATTTGTCTTCCTTAATTAGCGAATTAAGATTAATTCAAGGTTCTTCTCCTATCATTCTTCAAATTTTCTGTTTTATTTTGTCTATGCCAAATCAACGCAACTTAACTAGCATATAAATATGCTAGTAATCATGAGTTCCATACTTCGAATCTTTCAATCCCAAATTCTAATAGGAAAAGAGTTTTTCAGATCAAATCCTTCTAGAATTATAATTGATGTATTCTAAGAGAGATTAAAATGCTTTAAGAAATATGAACTATAGTAGCAGTTCATTTAGTCTAGTAGCGGTTTCACAAGTAGATACGGTGTTTTTTAAAAACAACTAGAATCAAAATGTAAAACTTTCGCATCAAATGTAAAATTCCTTGAATGGTCATGTTTTCTTGGGCTGAAAATTATATTTCAAGGTAAATTTGTTCCAATAACTTTTGTATTATGTTGGTTAATAAGTCACTTACTAATTAGGTTGGATACTGAGAAGCATTTGAATCTAATTTGTGCATGTAAAGCATTACAAATCAATAGATATGAGTGTAAAGGATAAGGGGAAAAATGGTGTGGTTGAGTTGCAGCCACAATATATATAGAAAATTAAAATATGTGAAAGTGAAAAAATAAATGGAAAAAAGTGGAAGAAATGAGAGGGAAGTTTTGGGAAGAGGACAAGAGCCATTGGTGTTTCAAAATTCATAGACAAAGTGGCTGTTGATTGAAGTACCTCAAAATTCCTTCGTCTAAATGGATAATTCTCTCTTCTGACCTTTTCCTTTTTTCTCTATACATTCTTGATTTTCTAATTCACAAAATTATTGTTATTTTCAAGCTTTCTTTGAAGGTCTTTTTTTAAACTTTGAAATTGTGTAATATAAAATAAACAAATCTAGTTGATGAGCTAGAACACAACTTTGATCCATTGTGCAGACTACACTTATTATTTTATCAACTAATTTATACATTCTTTAGTTGGATTTCTTAGTTTGTTGGAAGGTTGCTAAAAATAGTATAAGATCATGCATAATTTAATTTACTACTAAAATTTACTAGCATATATACTAGACATAGAGATTGACTACTACATACTAGTCTTTACTATTATATAATTTCAATGATACCAAAAATTTATAATAAAGATTTCCTCATTTATTTACAATAATGTATATACACATTTGAATTTAACTGATACATTAACGAAAATTTATATAACATCATCTTAATACATTTAACGAAAATTTAGAAAAGAAAAAAAATGGTCATAAGGGTGTAAAAATCTATTTTTTTTTTTCCAATTTTCATCATTTTAGAAAGGGAATTTGAAAATTTCATAATTTTATCAAATATATTTTTAGTTGTCAATGACATACAAAGTTAAGTTAAATTACATGTTTAATTCTATAAGTTTTAGAATGTTAAAAAGTATTTAAGGATGGATTCATGAACTTATAATTTTATCTCTAAGTTCTTAAACATTTTTTTTAAATTTACAAAGTTATATAAAAATTCAAATGTTAAAATCTTTTATCTTATAAAATTTAAAATATTGAAGAAGGCAAAAACTTATTCAACAAAAAAAAATTAAATGTTACAACTTTGATAAATTTAAGTCATGAAAGCCTACAGGTAGGCACAAGAAAGTTTAAAGTAAGGATTAAAATGAAAATATCAATATGATGATATAAATGGAAAATTCTAAAAAAAATTATATATAAACAAAAAAAAACATCAAAAACTATGTTTAAATTAATAAATAAAACATTTTATGATTTTTAAACAAATTAACATGTCTATTATTTATATATCAATGATAGACTTTTGAAATAATTTCTATTCATAGCCATTTTCTTTGTTATTATAATATAATAGAAATATTGATTCATCCTTTATATCAAAATTGGTATAAAGTAGGAAAATATGGAGATAGCAACATAAATTTAATAGTGGCTAAAAAAAGAAAATGATTTAAAACCTTGAGACCTTGTTTGGAAAGGATTCCAATTCTACTCTAATAGTCTCACTGTTGGCGAATTCCTATTCCACACGCGAGCGGAATCAAATTTAAACCACGTCGGTGGTTACCAAAGCCATATCCCAAACAAGTTACTAAACACCGACCCATCGGCCATCGTTTCCCCTTCTGGAAGCTGCTAACCTTTTCACACCTGGGGCTTCGCCACTGAACCAAACCAATTTGATTTGATTTCTGTGCCAATTTTGAGCCATTCCATTGAAGCCAAACTCCAACACCATACTATCATACTCTTCTAAAACCTTCAATCAAACAATCCAATTCCCTTTCCCCAATTAATCACCCATTTCTCCCTTCTTCTTCACTCTTCTGTTTCCCATTTCGCTGTTACAATGCTATTTCCTTGACCCACCGCAATCGCTCTGCAACTCAGGGATTCTCTCGAAACTCCCTGAATCATATGCCACATGCAGTTCCAGCTCCATTTCAAGTGGATTTCCTGATGACCCAGGTTGGTAAATTGTAAATTTGACCTTGCCAGGTGCGAGGGCTCTTCATTTCTTTTTTTGAAATACCAAGCTTCCCAGTTCCAATTTGACCATGAATTGAAGTTTGGGCGTTCTGGGTAGTGAGAATTCTCTGTCTGTAGTCTAGCAATTTTCTTTCTTACTGTAATTTTGAAGTTCAGGGTTTTGATTTTCATTACCCACATGAATTGGCTTTCTTGTCAATGCAATATATCTATATATATAGCTTGTCAATTGCTTGTTTGCCTCAATGCAAGAAGTGCTTTGGCTTAGAGGAAAACGAGGCAGAAGACAACTGATATTAGAAGGATTTCAAGTAGTTGGCTCAGTGTTGGATCGAAGGAGAAAAAAATGGTGCGGAAGTAATTATGTTGGCATTTTAAAATGTATTTTGTTCATCCTCAAACCAGAGATTCTCTGGTTAGTCCCTCAATTTCCCCTTTGCATTCTTCTTCTTCTTCTTCTTCTTCATTAGCATATAACAGTGACTACCAAAAACAAGAACCAACTCCACTCACTTCCTCTAGCAGTAAAATAAGCCCTGCAGTTCTTTTAGTAATAGTTATTCTGGCACTTTTCCTTTTCATCTCTGGTCTTCTTCACTTGCTAGTGAGATTACTTGTAAAGCAACGTTCCTCATCATCGTCAATGTCTGAATCCAATAGCAATAGATTCCCAGAAATGTCTGAATCATCTGCTTTTCAAAGACAGTTACAACAGCTCTTCCATCTTCATGATTCAGGTCTAGATCAAGCCTTCATAGATGCACTACCTGTTTTCCTTTACAAAGAGATAGTGGGTTTAAAAGAACCGTTTGATTGTGCTGTATGTCTTTGTGAATTTTCAGCACTAGACAAGCTAAGATTGCTCCCTACTTGCAGTCATGCTTTTCACATTGATTGTATAGACACATGGTTGCTTTCTAATTCAACTTGCCCTCTTTGTAGAGGGACCCTTCACATTCACTCACCTGGACTTGCCATAGAAAACCCTGTATATGGTTTTGAAGATTCAGAAGAGACAGAAGAATCTACAGAGGATGGAAGATTTGGTATTCCTACAGCTCAAAAAGCTCCAGAGAGTGACATTATTGGTGAAAAAAGAGTGTTTTCAATCAGGCTTGGCAAATTTAGGAACTTGAATAATGGAGGATTGAGAGGATTAGAGAAAGGAGAGGGAGAAACCAGCAGTAGCAGTTTGAGTGCAAGAAGATGCTTTTCAATGGGGTCTTATCAGTATATTGTGGCTGATTCAGAGTTGCAAGTTGCGTTACGTACGAGTAATCGCATCTGTGGGGGAAGTATGAGATTTGTGAAAGTAATAAGAGATTCACAAACTGGGAATTGTCCAATTGATGGTGATGATGATGCTGAGGGGAAGAAGATTAACATTGGAAGTAAAAATGAAAGCTTTTCTGTTTCAAAAATCTGGTTATGGTCCAAGAAGACTCGACAGCCAAGTGGTTCAGACACCCATGTGCGAGCTAGTTAA

mRNA sequence

ATGGAATATTATAATAATTGTGAGAGCAAAGGAATTGGGAAGGTGAAGTGGCAGAGGAGAGGGAGGCGTGGCGGACGGCACGGCGGCGGCGGCTCCGTCCAAATGAAGATGAGAAAGCTGCAGCGGCTGATCCCCGGCGGACGGAGGCTGAAACCGGACCGCTTATTCTTGAAAACTGCTGATTATATAATGCAATTGAGCCAAACTCCAACACCATACTATCATACTCTTCTAAAACCTTCAATCAAACAATCCAATTCCCTTTCCCCAATTAATCACCCATTTCTCCCTTCTTCTTCACTCTTCTGTTTCCCATTTCGCTGTTACAATGCTATTTCCTTGACCCACCGCAATCGCTCTGCAACTCAGGGATTCTCTCGAAACTCCCTGAATCATATGCCACATGCAGTTCCAGCTCCATTTCAAGTGGATTTCCTGATGACCCAGGTTGTGAGATTACTTGTAAAGCAACGTTCCTCATCATCGTCAATGTCTGAATCCAATAGCAATAGATTCCCAGAAATGTCTGAATCATCTGCTTTTCAAAGACAGTTACAACAGCTCTTCCATCTTCATGATTCAGGTCTAGATCAAGCCTTCATAGATGCACTACCTGTTTTCCTTTACAAAGAGATAGTGGGTTTAAAAGAACCGTTTGATTGTGCTGTATGTCTTTGTGAATTTTCAGCACTAGACAAGCTAAGATTGCTCCCTACTTGCAGTCATGCTTTTCACATTGATTGTATAGACACATGGTTGCTTTCTAATTCAACTTGCCCTCTTTGTAGAGGGACCCTTCACATTCACTCACCTGGACTTGCCATAGAAAACCCTGTATATGGTTTTGAAGATTCAGAAGAGACAGAAGAATCTACAGAGGATGGAAGATTTGGTATTCCTACAGCTCAAAAAGCTCCAGAGAGTGACATTATTGGTGAAAAAAGAGTGTTTTCAATCAGGCTTGGCAAATTTAGGAACTTGAATAATGGAGGATTGAGAGGATTAGAGAAAGGAGAGGGAGAAACCAGCAGTAGCAGTTTGAGTGCAAGAAGATGCTTTTCAATGGGGTCTTATCAGTATATTGTGGCTGATTCAGAGTTGCAAGTTGCGTTACGTACGAGTAATCGCATCTGTGGGGGAAGTATGAGATTTGTGAAAGTAATAAGAGATTCACAAACTGGGAATTGTCCAATTGATGGTGATGATGATGCTGAGGGGAAGAAGATTAACATTGGAAGTAAAAATGAAAGCTTTTCTGTTTCAAAAATCTGGTTATGGTCCAAGAAGACTCGACAGCCAAGTGGTTCAGACACCCATGTGCGAGCTAGTTAA

Coding sequence (CDS)

ATGGAATATTATAATAATTGTGAGAGCAAAGGAATTGGGAAGGTGAAGTGGCAGAGGAGAGGGAGGCGTGGCGGACGGCACGGCGGCGGCGGCTCCGTCCAAATGAAGATGAGAAAGCTGCAGCGGCTGATCCCCGGCGGACGGAGGCTGAAACCGGACCGCTTATTCTTGAAAACTGCTGATTATATAATGCAATTGAGCCAAACTCCAACACCATACTATCATACTCTTCTAAAACCTTCAATCAAACAATCCAATTCCCTTTCCCCAATTAATCACCCATTTCTCCCTTCTTCTTCACTCTTCTGTTTCCCATTTCGCTGTTACAATGCTATTTCCTTGACCCACCGCAATCGCTCTGCAACTCAGGGATTCTCTCGAAACTCCCTGAATCATATGCCACATGCAGTTCCAGCTCCATTTCAAGTGGATTTCCTGATGACCCAGGTTGTGAGATTACTTGTAAAGCAACGTTCCTCATCATCGTCAATGTCTGAATCCAATAGCAATAGATTCCCAGAAATGTCTGAATCATCTGCTTTTCAAAGACAGTTACAACAGCTCTTCCATCTTCATGATTCAGGTCTAGATCAAGCCTTCATAGATGCACTACCTGTTTTCCTTTACAAAGAGATAGTGGGTTTAAAAGAACCGTTTGATTGTGCTGTATGTCTTTGTGAATTTTCAGCACTAGACAAGCTAAGATTGCTCCCTACTTGCAGTCATGCTTTTCACATTGATTGTATAGACACATGGTTGCTTTCTAATTCAACTTGCCCTCTTTGTAGAGGGACCCTTCACATTCACTCACCTGGACTTGCCATAGAAAACCCTGTATATGGTTTTGAAGATTCAGAAGAGACAGAAGAATCTACAGAGGATGGAAGATTTGGTATTCCTACAGCTCAAAAAGCTCCAGAGAGTGACATTATTGGTGAAAAAAGAGTGTTTTCAATCAGGCTTGGCAAATTTAGGAACTTGAATAATGGAGGATTGAGAGGATTAGAGAAAGGAGAGGGAGAAACCAGCAGTAGCAGTTTGAGTGCAAGAAGATGCTTTTCAATGGGGTCTTATCAGTATATTGTGGCTGATTCAGAGTTGCAAGTTGCGTTACGTACGAGTAATCGCATCTGTGGGGGAAGTATGAGATTTGTGAAAGTAATAAGAGATTCACAAACTGGGAATTGTCCAATTGATGGTGATGATGATGCTGAGGGGAAGAAGATTAACATTGGAAGTAAAAATGAAAGCTTTTCTGTTTCAAAAATCTGGTTATGGTCCAAGAAGACTCGACAGCCAAGTGGTTCAGACACCCATGTGCGAGCTAGTTAA

Protein sequence

MEYYNNCESKGIGKVKWQRRGRRGGRHGGGGSVQMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLSQTPTPYYHTLLKPSIKQSNSLSPINHPFLPSSSLFCFPFRCYNAISLTHRNRSATQGFSRNSLNHMPHAVPAPFQVDFLMTQVVRLLVKQRSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIVGLKEPFDCAVCLCEFSALDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCRGTLHIHSPGLAIENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRVFSIRLGKFRNLNNGGLRGLEKGEGETSSSSLSARRCFSMGSYQYIVADSELQVALRTSNRICGGSMRFVKVIRDSQTGNCPIDGDDDAEGKKINIGSKNESFSVSKIWLWSKKTRQPSGSDTHVRAS

Homology

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BLAST of Clc05G27430 vs. NCBI nr
Match: XP_038893199.1 (RING-H2 finger protein ATL46-like [Benincasa hispida])

HSP 1 Score: 539.3 bits (1388), Expect = 3.2e-149
Identity = 275/298 (92.28%), Postives = 284/298 (95.30%), Query Frame = 0


Query: 146 LMTQVVRLLVKQRSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALP 205
           L+  +VRLLVKQRSSSSS+SESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALP
Sbjct: 69  LLHLLVRLLVKQRSSSSSISESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALP 128

Query: 206 VFLYKEIVGLKEPFDCAVCLCEFSALDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCRGT 265
           VFLYKEIVGLKEPFDCAVCLCEFS LDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCRGT
Sbjct: 129 VFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCRGT 188

Query: 266 LHIHSPGLAIENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRVFSIRLGKFR 325
           L  HSP LAIENPVYGFE+SEETE STEDGRFGIPTA KA ES+IIGE+RVFSIRLGKFR
Sbjct: 189 L--HSPVLAIENPVYGFEESEETEVSTEDGRFGIPTAHKASESEIIGERRVFSIRLGKFR 248

Query: 326 NLNNGGLRGLEKGEGETSSSSLSARRCFSMGSYQYIVADSELQVALRTSNRICGGSMRFV 385
           NLNNGGLRGLEK EGETSSSSLSARRC+SMGSYQYIVADSELQVALRTSNR  GGSMRFV
Sbjct: 249 NLNNGGLRGLEKEEGETSSSSLSARRCYSMGSYQYIVADSELQVALRTSNRNGGGSMRFV 308

Query: 386 KVIRDSQTGNCPIDGDDDAEGKKINIGSKNESFSVSKIWLWSKKTRQPSGSDTHVRAS 444
           KVIRDSQ GNCPID DDDA+GKKINIGSKNESFSVSKIWLWSKK+RQPSGSDTHVRAS
Sbjct: 309 KVIRDSQIGNCPIDDDDDADGKKINIGSKNESFSVSKIWLWSKKSRQPSGSDTHVRAS 364

[Close]

BLAST of Clc05G27430 vs. NCBI nr
Match: KAA0034330.1 (RING-H2 finger protein ATL46 [Cucumis melo var. makuwa] >TYK15589.1 RING-H2 finger protein ATL46 [Cucumis melo var. makuwa])

HSP 1 Score: 528.5 bits (1360), Expect = 5.6e-146
Identity = 282/355 (79.44%), Postives = 292/355 (82.25%), Query Frame = 0


Query: 130 LNHMPHAVPAPFQVDFLMTQV--------------------------------------- 189
           +NH+ HAVPA F VDF M QV                                       
Sbjct: 1   MNHIAHAVPASFLVDFPMPQVAYDIDYQKLEPTPPSTSSSSKISPAVLLVIVILALFLFI 60

Query: 190 -------VRLLVKQRSSSSSMSESNSNRFPEMSE-SSAFQRQLQQLFHLHDSGLDQAFID 249
                  VRLLVKQRSSSSS+SESNSNRFPE+SE SSAFQRQLQQLFHLHDSGLDQAFID
Sbjct: 61  SGLLHLLVRLLVKQRSSSSSISESNSNRFPELSESSSAFQRQLQQLFHLHDSGLDQAFID 120

Query: 250 ALPVFLYKEIVGLKEPFDCAVCLCEFSALDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLC 309
           ALPVFLYKEIVGLKEPFDCAVCLCEFS LDKLRLLP+CSHAFHIDCIDTWLLSNSTCPLC
Sbjct: 121 ALPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPLC 180

Query: 310 RGTLHIHSPGLAIENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRVFSIRLG 369
           RGTLHI SP LAIENPVYGFEDSEETEESTE+GRFGI TAQKAPESDIIGEKRVFSIRLG
Sbjct: 181 RGTLHIQSPVLAIENPVYGFEDSEETEESTENGRFGILTAQKAPESDIIGEKRVFSIRLG 240

Query: 370 KFRNLNNGGLRGLEKGEGETSSSSLSARRCFSMGSYQYIVADSELQVALRTSNRICGGSM 429
           KFRNLNNGGLRGLEKGEGETSSSSL+ARRC+SMGSYQYIVA+SELQVAL TSNRI GGSM
Sbjct: 241 KFRNLNNGGLRGLEKGEGETSSSSLNARRCYSMGSYQYIVAESELQVALHTSNRISGGSM 300

Query: 430 RFVKVIRDSQTGNCPID-GDDDAEGKKINIGSKNESFSVSKIWLWSKKTRQPSGS 437
           RFVKVIRDSQTGNCPID  DDDAE KKINIGSKNESFSVSKIWLWSKK+RQP  S
Sbjct: 301 RFVKVIRDSQTGNCPIDHDDDDAERKKINIGSKNESFSVSKIWLWSKKSRQPCSS 355

[Close]

BLAST of Clc05G27430 vs. NCBI nr
Match: XP_004135477.1 (RING-H2 finger protein ATL46 [Cucumis sativus] >KGN51821.1 hypothetical protein Csa_008432 [Cucumis sativus])

HSP 1 Score: 525.4 bits (1352), Expect = 4.8e-145
Identity = 270/293 (92.15%), Postives = 279/293 (95.22%), Query Frame = 0


Query: 146 LMTQVVRLLVKQRSSSSSMSESNSNRFPEMSE-SSAFQRQLQQLFHLHDSGLDQAFIDAL 205
           L+  +VRLLVKQRSSSSS+SESNSNRFP++SE SSAFQRQLQQLFHLHDSGLDQAFIDAL
Sbjct: 67  LLHLLVRLLVKQRSSSSSISESNSNRFPDLSESSSAFQRQLQQLFHLHDSGLDQAFIDAL 126

Query: 206 PVFLYKEIVGLKEPFDCAVCLCEFSALDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCRG 265
           PVFLYKEIVGLKEPFDCAVCLCEFS LDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCRG
Sbjct: 127 PVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCRG 186

Query: 266 TLHIHSPGLAIENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRVFSIRLGKF 325
           TLHI SP LAIENPVYGFEDSEETEESTE+GRFGI TAQKAPESDIIGEKRVFSIRLGKF
Sbjct: 187 TLHIQSPVLAIENPVYGFEDSEETEESTENGRFGILTAQKAPESDIIGEKRVFSIRLGKF 246

Query: 326 RNLNNGGLRGLEKGEGETSSSSLSARRCFSMGSYQYIVADSELQVALRTSNRICGGSMRF 385
           RNLNNGGLRGLEKGEGETSSSSLSARRC+SMGSYQYIVA+SELQVAL TSNRI GGSMRF
Sbjct: 247 RNLNNGGLRGLEKGEGETSSSSLSARRCYSMGSYQYIVAESELQVALHTSNRISGGSMRF 306

Query: 386 VKVIRDSQTGNCPID-GDDDAEGKKINIGSKNESFSVSKIWLWSKKTRQPSGS 437
           VKVIRDSQTGNCPID  DDDAE KKINIGSKNESFSVSKIWLWSKK+RQP  S
Sbjct: 307 VKVIRDSQTGNCPIDRDDDDAERKKINIGSKNESFSVSKIWLWSKKSRQPCSS 359

[Close]

BLAST of Clc05G27430 vs. NCBI nr
Match: XP_008446237.1 (PREDICTED: RING-H2 finger protein ATL46 [Cucumis melo])

HSP 1 Score: 523.9 bits (1348), Expect = 1.4e-144
Identity = 269/293 (91.81%), Postives = 279/293 (95.22%), Query Frame = 0


Query: 146 LMTQVVRLLVKQRSSSSSMSESNSNRFPEMSE-SSAFQRQLQQLFHLHDSGLDQAFIDAL 205
           L+  +VRLLVKQRSSSSS+SESNSNRFPE+SE SSAFQRQLQQLFHLHDSGLDQAFIDAL
Sbjct: 67  LLHLLVRLLVKQRSSSSSISESNSNRFPELSESSSAFQRQLQQLFHLHDSGLDQAFIDAL 126

Query: 206 PVFLYKEIVGLKEPFDCAVCLCEFSALDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCRG 265
           PVFLYKEIVGLKEPFDCAVCLCEFS LDKLRLLP+CSHAFHIDCIDTWLLSNSTCPLCRG
Sbjct: 127 PVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPLCRG 186

Query: 266 TLHIHSPGLAIENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRVFSIRLGKF 325
           TLHI SP LAIENPVYGFEDSEETEESTE+GRFGI TAQKAPESDIIGEKRVFSIRLGKF
Sbjct: 187 TLHIQSPVLAIENPVYGFEDSEETEESTENGRFGILTAQKAPESDIIGEKRVFSIRLGKF 246

Query: 326 RNLNNGGLRGLEKGEGETSSSSLSARRCFSMGSYQYIVADSELQVALRTSNRICGGSMRF 385
           RNLNNGGLRGLEKGEGETSSSSL+ARRC+SMGSYQYIVA+SELQVAL TSNRI GGSMRF
Sbjct: 247 RNLNNGGLRGLEKGEGETSSSSLNARRCYSMGSYQYIVAESELQVALHTSNRISGGSMRF 306

Query: 386 VKVIRDSQTGNCPID-GDDDAEGKKINIGSKNESFSVSKIWLWSKKTRQPSGS 437
           VKVIRDSQTGNCPID  DDDAE KKINIGSKNESFSVSKIWLWSKK+RQP  S
Sbjct: 307 VKVIRDSQTGNCPIDHDDDDAERKKINIGSKNESFSVSKIWLWSKKSRQPCSS 359

[Close]

BLAST of Clc05G27430 vs. NCBI nr
Match: XP_022151161.1 (RING-H2 finger protein ATL47 [Momordica charantia] >XP_022151162.1 RING-H2 finger protein ATL47 [Momordica charantia])

HSP 1 Score: 492.7 bits (1267), Expect = 3.4e-135
Identity = 255/303 (84.16%), Postives = 272/303 (89.77%), Query Frame = 0


Query: 141 FQVDFLMTQVVRLLVKQRSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAF 200
           F +  ++  +VR LVKQR S SS+SESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAF
Sbjct: 57  FFISGILHFLVRFLVKQR-SPSSISESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAF 116

Query: 201 IDALPVFLYKEIVGLKEPFDCAVCLCEFSALDKLRLLPTCSHAFHIDCIDTWLLSNSTCP 260
           IDALPVFLY EIVGLKEPFDCAVCLCEFS LDKLRLLPTCSHAFHIDCIDTWLLSNSTCP
Sbjct: 117 IDALPVFLYTEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDTWLLSNSTCP 176

Query: 261 LCRGTLHIHSPGLAIENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRVFSIR 320
           LCRGTL  +SPGLAIENP++GFEDSE TE S EDGR G+PTAQK PE+D+ GEKRVFSIR
Sbjct: 177 LCRGTL--YSPGLAIENPIFGFEDSEGTEGSAEDGRIGVPTAQKPPENDMYGEKRVFSIR 236

Query: 321 LGKFRNLNNGGLRGLEKGEGETSSSSLSARRCFSMGSYQYIVADSELQVALRTSNRICGG 380
           LGKFRNLNNGG+RGLEKGEGETSSSSL ARRC+SMGSYQYIVADS+LQVALRTSNR  G 
Sbjct: 237 LGKFRNLNNGGVRGLEKGEGETSSSSLGARRCYSMGSYQYIVADSDLQVALRTSNRTGGR 296

Query: 381 SMRFVKVIRDSQTGNCPIDGDDDAEGKKINIGSKNESFSVSKIWLWSKKTRQPSGSDTHV 440
           SMRFV+  RDSQTGN  I  DDDAEGKKINIGSKNESFSVSKIWLWSKK RQP GSD H+
Sbjct: 297 SMRFVRA-RDSQTGNSLI--DDDAEGKKINIGSKNESFSVSKIWLWSKKARQPIGSDVHL 353

Query: 441 RAS 444
           RA+
Sbjct: 357 RAN 353

[Close]

BLAST of Clc05G27430 vs. ExPASy Swiss-Prot
Match: Q8GW38 (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.4e-75
Identity = 176/337 (52.23%), Postives = 214/337 (63.50%), Query Frame = 0


Query: 105 PFRCYNAISLTHR---NRSATQGFSRNSLNHMPHAVPAPFQVDFLMTQVVRLLV----KQ 164
           P    + I+L H+   + S++     N ++ +   +     V F +  ++ LLV    K+
Sbjct: 21  PSSAPSPITLNHQLTDSSSSSSSGGNNRISPIILFIIVLLSVIFFICSILHLLVRYYLKK 80

Query: 165 RSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIVGLKE 224
           + S+ S S + SN+ PE S+S  +QRQLQQLFHLHDSGLDQA IDALPVFLYKEI G KE
Sbjct: 81  KRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTKE 140

Query: 225 PFDCAVCLCEFSALDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCRGTLHIHSPGLAIEN 284
           PFDCAVCLCEFS  DKLRLLP CSHAFHIDCIDTWLLSNSTCPLCRGTL   S G   E 
Sbjct: 141 PFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTL--FSLGHQFEY 200

Query: 285 PVYGFEDSEETEESTEDGRFGIPTA--QKAPESDIIGEKRVFSIRLGKFRN---LNNGGL 344
           P + F        + +DG  G+  +  QK  E++I   KRVFS+RLGKFR+   +NNG +
Sbjct: 201 PDFNFGFF-----AGDDGGGGVRVSPVQKPAENEI--GKRVFSVRLGKFRSSNIVNNGEV 260

Query: 345 RGLEKGEGETSSSSLSARRCFSMGSYQYIVADSELQVALRTSNRICGGSMRFVKVIRDSQ 404
             +  G GETSSSSL  RRCFSMGSYQYIVA+S+L VAL  +N                 
Sbjct: 261 --VVGGGGETSSSSLDNRRCFSMGSYQYIVAESDLVVALCPNNE---------------- 320

Query: 405 TGNCPIDGDDDAEGKKINIGSKNESFSVSKIWLWSKK 430
                +  + D EGKKIN+ SK ESFSVSKIW WS K
Sbjct: 321 ----GLKNNKDVEGKKINMRSKGESFSVSKIWQWSNK 326

[Close]

BLAST of Clc05G27430 vs. ExPASy Swiss-Prot
Match: Q9FL07 (RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 3.2e-75
Identity = 174/318 (54.72%), Postives = 215/318 (67.61%), Query Frame = 0


Query: 141 FQVDFLMTQVVRLLVKQRSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAF 200
           F +  L+  +VR L+K  S+++S   S SNRFPE+S S A QRQLQQLFHL+DSGLDQAF
Sbjct: 56  FFISGLLHLLVRFLIKHPSATAS---SRSNRFPEISTSDALQRQLQQLFHLNDSGLDQAF 115

Query: 201 IDALPVFLYKEIVG----------LKEPFDCAVCLCEFSALDKLRLLPTCSHAFHIDCID 260
           IDALPVF YKEIVG           +EPFDCAVCLCEFS  DKLRLLP CSHAFH++CID
Sbjct: 116 IDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCID 175

Query: 261 TWLLSNSTCPLCRGTLHIHSPGLAIENPVYGFEDSEETEES-TEDGRFGIPTAQKAPE-S 320
           TWL SNSTCPLCRGTL   SPG ++ENP++ F+D  E EE  TE+G      +QK  E  
Sbjct: 176 TWLQSNSTCPLCRGTL--FSPGFSMENPMFDFDDIREDEEGVTENG------SQKTMEIQ 235

Query: 321 DIIGEKRVFSIRLGKFRNLNN-GGLRGLE-KGEGETSSSSLSARRCFSMGSYQYIVADSE 380
           +I+ EK V  +RLGKF+ L+N G  +G +    GETSSS+L ARRCFSMGSYQYI+ +SE
Sbjct: 236 EIVVEKGVLPVRLGKFKRLDNVGNGQGQDVVAGGETSSSNLDARRCFSMGSYQYILGNSE 295

Query: 381 LQVALRTSNRICGGSMRFVKVIRDS-QTGNCPIDGDDDAEGKKINIGSKNESFSVSKIWL 440
           L+V    ++R+     R     ++S QTGN         + KKIN  +K ESFSVSKIWL
Sbjct: 296 LKVPF-ANDRL----PRLKPQDKESEQTGN-----SSSEDNKKINTVAKGESFSVSKIWL 352

Query: 441 WSKKTRQPSGSDTHVRAS 444
           W KK +  S +   + +S
Sbjct: 356 WPKKDKFSSDAQRRLPSS 352

[Close]

BLAST of Clc05G27430 vs. ExPASy Swiss-Prot
Match: Q940Q4 (RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2)

HSP 1 Score: 188.7 bits (478), Expect = 1.4e-46
Identity = 137/337 (40.65%), Postives = 175/337 (51.93%), Query Frame = 0


Query: 145 FLMTQVVRLLVKQRSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDAL 204
           F ++ ++ LLV+       ++ S+ +R       +A Q QLQQLFHLHDSG+DQ+FID L
Sbjct: 62  FFISGLLHLLVR-----FLLTPSSRDREDYFDNVTALQGQLQQLFHLHDSGVDQSFIDTL 121

Query: 205 PVFLYKEIVGLKE-PFDCAVCLCEFSALDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCR 264
           PVF YK I+GLK  PFDCAVCLCEF   DKLRLLP CSHAFH+DCIDTWLLS+STCPLCR
Sbjct: 122 PVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCR 181

Query: 265 GTLHIHSPGLAIENPVYGF---EDSEETEESTEDGRFGIPTAQKAPESDI---------- 324
            +L   S   + ++P   F    +S     S E G      A  A   DI          
Sbjct: 182 SSL--LSDLSSHQDPRSSFLLVLESASDHSSREIGGDRDSAACVAANDDIDVSSAHLGLV 241

Query: 325 ----IGEKRV----------------------FSIRLGKFRNLNNGGLRGLEKGEGETSS 384
               +G  R+                      FS++LGKFRN++ G   G        +S
Sbjct: 242 GNNDLGSTRIDSGHGDQYLDGELGGSVGKVVPFSVKLGKFRNIDIG--EGTSSNNNIGNS 301

Query: 385 SSLSARRCFSMGSYQYIV-ADSELQVALRT-----SNRICGGSMRFVKVIRDSQTGNCPI 432
           SSL  RRCFSMGSY+YI+  ++ L+V + T      NR   G    +       TG    
Sbjct: 302 SSLDERRCFSMGSYEYIMDEETTLKVHVSTKKQSSKNRGLPGHRTAMSECGFDPTGRLKF 361

[Close]

BLAST of Clc05G27430 vs. ExPASy Swiss-Prot
Match: Q9ZV53 (Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 9.9e-45
Identity = 125/319 (39.18%), Postives = 176/319 (55.17%), Query Frame = 0


Query: 145 FLMTQVVRLLVKQRSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDAL 204
           F ++ ++ +LVK       ++ S  +R       +A Q QLQQLF+LHDSG+DQ+ ID L
Sbjct: 54  FFISGLLHILVK-----FLLTPSRESREDYFDNVTALQGQLQQLFNLHDSGVDQSLIDTL 113

Query: 205 PVFLYKEIVGLK-EPFDCAVCLCEFSALDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCR 264
           PVF YK IVGLK  PFDC VCLCEF   DKLRLLP CSHAFH++CIDTWLLS+STCPLCR
Sbjct: 114 PVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCR 173

Query: 265 GTL--------HIHSPGLAI---------------ENPVYGFEDSEETEESTEDGRFGIP 324
             L        ++ S  L +                N   G++ + ++E +    R G  
Sbjct: 174 SNLLSGFSSHHNLSSSYLLVLESEQSSRDMVPVLESNSQLGYDVNNDSESTRI--RSGRK 233

Query: 325 TAQKAPESDIIGEKRV-FSIRLGKFRNLNNGGLRGLEKGEGETS--SSSLSARRCFSMGS 384
           +     + D + EK V   ++LGKFRN+++ G  G ++ +   S  S ++  RRC SMGS
Sbjct: 234 SCDPDGDMDGLDEKVVPLEVKLGKFRNIDHVG-EGSDQKKNSISGNSKNVDGRRCLSMGS 293

Query: 385 YQYIVADSELQVALRTSNRICGGSMRFVKVIRDSQTGNCPIDGDDDAEGKKINIGSKNES 437
           Y+YI+ D E  + +  S +   G  R    +   +T       D   +G + ++  + ES
Sbjct: 294 YEYIM-DQEATLKVHVSTKKLSGKDR----VPSHRTVMSECGFDPTVKGIEKSV-VERES 353

[Close]

BLAST of Clc05G27430 vs. ExPASy Swiss-Prot
Match: Q7X843 (RING-H2 finger protein ATL48 OS=Arabidopsis thaliana OX=3702 GN=ATL48 PE=1 SV=2)

HSP 1 Score: 163.7 bits (413), Expect = 4.8e-39
Identity = 102/226 (45.13%), Postives = 132/226 (58.41%), Query Frame = 0


Query: 158 RSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKEI-VGLK 217
           R SS+     + N  P++   S+   QLQ LF LHDSGLDQ  IDALPVFLY  + + L+
Sbjct: 145 RKSSTLFPIPHFNYNPDLFSFSS--PQLQHLFFLHDSGLDQTAIDALPVFLYGNVTISLE 204

Query: 218 EPFDCAVCLCEFSALDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCRGTL------HIHS 277
           +PFDCAVCL EFS  DKLRLLP CSHAFH+ CIDTWLLSNSTCPLCR +L      + HS
Sbjct: 205 QPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSLSTSNVCYNHS 264

Query: 278 PGLAIENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRVFSIRLGKFRNLNNG 337
             L    P+ G        +  +DG+  +              KRVFS+RLG+F++ N  
Sbjct: 265 ETLVA--PLSG-------HQQVDDGKASL-------------AKRVFSVRLGRFKSTNES 324

Query: 338 GLRGLEKGEGETSSSSLSARRCFSMGSYQYIVADSELQVALRTSNR 377
                ++ + +        RRC+SMG+ QY+V D +  VAL +S R
Sbjct: 325 ---QSQRHDVKDEIGVRMPRRCYSMGTQQYLVCDQDFVVALSSSPR 343

[Close]

BLAST of Clc05G27430 vs. ExPASy TrEMBL
Match: A0A5D3CZH7 (RING-H2 finger protein ATL46 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00840 PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 2.7e-146
Identity = 282/355 (79.44%), Postives = 292/355 (82.25%), Query Frame = 0


Query: 130 LNHMPHAVPAPFQVDFLMTQV--------------------------------------- 189
           +NH+ HAVPA F VDF M QV                                       
Sbjct: 1   MNHIAHAVPASFLVDFPMPQVAYDIDYQKLEPTPPSTSSSSKISPAVLLVIVILALFLFI 60

Query: 190 -------VRLLVKQRSSSSSMSESNSNRFPEMSE-SSAFQRQLQQLFHLHDSGLDQAFID 249
                  VRLLVKQRSSSSS+SESNSNRFPE+SE SSAFQRQLQQLFHLHDSGLDQAFID
Sbjct: 61  SGLLHLLVRLLVKQRSSSSSISESNSNRFPELSESSSAFQRQLQQLFHLHDSGLDQAFID 120

Query: 250 ALPVFLYKEIVGLKEPFDCAVCLCEFSALDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLC 309
           ALPVFLYKEIVGLKEPFDCAVCLCEFS LDKLRLLP+CSHAFHIDCIDTWLLSNSTCPLC
Sbjct: 121 ALPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPLC 180

Query: 310 RGTLHIHSPGLAIENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRVFSIRLG 369
           RGTLHI SP LAIENPVYGFEDSEETEESTE+GRFGI TAQKAPESDIIGEKRVFSIRLG
Sbjct: 181 RGTLHIQSPVLAIENPVYGFEDSEETEESTENGRFGILTAQKAPESDIIGEKRVFSIRLG 240

Query: 370 KFRNLNNGGLRGLEKGEGETSSSSLSARRCFSMGSYQYIVADSELQVALRTSNRICGGSM 429
           KFRNLNNGGLRGLEKGEGETSSSSL+ARRC+SMGSYQYIVA+SELQVAL TSNRI GGSM
Sbjct: 241 KFRNLNNGGLRGLEKGEGETSSSSLNARRCYSMGSYQYIVAESELQVALHTSNRISGGSM 300

Query: 430 RFVKVIRDSQTGNCPID-GDDDAEGKKINIGSKNESFSVSKIWLWSKKTRQPSGS 437
           RFVKVIRDSQTGNCPID  DDDAE KKINIGSKNESFSVSKIWLWSKK+RQP  S
Sbjct: 301 RFVKVIRDSQTGNCPIDHDDDDAERKKINIGSKNESFSVSKIWLWSKKSRQPCSS 355

[Close]

BLAST of Clc05G27430 vs. ExPASy TrEMBL
Match: A0A0A0KVN9 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G602200 PE=4 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 2.3e-145
Identity = 270/293 (92.15%), Postives = 279/293 (95.22%), Query Frame = 0


Query: 146 LMTQVVRLLVKQRSSSSSMSESNSNRFPEMSE-SSAFQRQLQQLFHLHDSGLDQAFIDAL 205
           L+  +VRLLVKQRSSSSS+SESNSNRFP++SE SSAFQRQLQQLFHLHDSGLDQAFIDAL
Sbjct: 67  LLHLLVRLLVKQRSSSSSISESNSNRFPDLSESSSAFQRQLQQLFHLHDSGLDQAFIDAL 126

Query: 206 PVFLYKEIVGLKEPFDCAVCLCEFSALDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCRG 265
           PVFLYKEIVGLKEPFDCAVCLCEFS LDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCRG
Sbjct: 127 PVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCRG 186

Query: 266 TLHIHSPGLAIENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRVFSIRLGKF 325
           TLHI SP LAIENPVYGFEDSEETEESTE+GRFGI TAQKAPESDIIGEKRVFSIRLGKF
Sbjct: 187 TLHIQSPVLAIENPVYGFEDSEETEESTENGRFGILTAQKAPESDIIGEKRVFSIRLGKF 246

Query: 326 RNLNNGGLRGLEKGEGETSSSSLSARRCFSMGSYQYIVADSELQVALRTSNRICGGSMRF 385
           RNLNNGGLRGLEKGEGETSSSSLSARRC+SMGSYQYIVA+SELQVAL TSNRI GGSMRF
Sbjct: 247 RNLNNGGLRGLEKGEGETSSSSLSARRCYSMGSYQYIVAESELQVALHTSNRISGGSMRF 306

Query: 386 VKVIRDSQTGNCPID-GDDDAEGKKINIGSKNESFSVSKIWLWSKKTRQPSGS 437
           VKVIRDSQTGNCPID  DDDAE KKINIGSKNESFSVSKIWLWSKK+RQP  S
Sbjct: 307 VKVIRDSQTGNCPIDRDDDDAERKKINIGSKNESFSVSKIWLWSKKSRQPCSS 359

[Close]

BLAST of Clc05G27430 vs. ExPASy TrEMBL
Match: A0A1S3BE30 (RING-H2 finger protein ATL46 OS=Cucumis melo OX=3656 GN=LOC103489027 PE=4 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 6.7e-145
Identity = 269/293 (91.81%), Postives = 279/293 (95.22%), Query Frame = 0


Query: 146 LMTQVVRLLVKQRSSSSSMSESNSNRFPEMSE-SSAFQRQLQQLFHLHDSGLDQAFIDAL 205
           L+  +VRLLVKQRSSSSS+SESNSNRFPE+SE SSAFQRQLQQLFHLHDSGLDQAFIDAL
Sbjct: 67  LLHLLVRLLVKQRSSSSSISESNSNRFPELSESSSAFQRQLQQLFHLHDSGLDQAFIDAL 126

Query: 206 PVFLYKEIVGLKEPFDCAVCLCEFSALDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCRG 265
           PVFLYKEIVGLKEPFDCAVCLCEFS LDKLRLLP+CSHAFHIDCIDTWLLSNSTCPLCRG
Sbjct: 127 PVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPLCRG 186

Query: 266 TLHIHSPGLAIENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRVFSIRLGKF 325
           TLHI SP LAIENPVYGFEDSEETEESTE+GRFGI TAQKAPESDIIGEKRVFSIRLGKF
Sbjct: 187 TLHIQSPVLAIENPVYGFEDSEETEESTENGRFGILTAQKAPESDIIGEKRVFSIRLGKF 246

Query: 326 RNLNNGGLRGLEKGEGETSSSSLSARRCFSMGSYQYIVADSELQVALRTSNRICGGSMRF 385
           RNLNNGGLRGLEKGEGETSSSSL+ARRC+SMGSYQYIVA+SELQVAL TSNRI GGSMRF
Sbjct: 247 RNLNNGGLRGLEKGEGETSSSSLNARRCYSMGSYQYIVAESELQVALHTSNRISGGSMRF 306

Query: 386 VKVIRDSQTGNCPID-GDDDAEGKKINIGSKNESFSVSKIWLWSKKTRQPSGS 437
           VKVIRDSQTGNCPID  DDDAE KKINIGSKNESFSVSKIWLWSKK+RQP  S
Sbjct: 307 VKVIRDSQTGNCPIDHDDDDAERKKINIGSKNESFSVSKIWLWSKKSRQPCSS 359

[Close]

BLAST of Clc05G27430 vs. ExPASy TrEMBL
Match: A0A6J1DCR2 (RING-H2 finger protein ATL47 OS=Momordica charantia OX=3673 GN=LOC111019155 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 1.7e-135
Identity = 255/303 (84.16%), Postives = 272/303 (89.77%), Query Frame = 0


Query: 141 FQVDFLMTQVVRLLVKQRSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAF 200
           F +  ++  +VR LVKQR S SS+SESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAF
Sbjct: 57  FFISGILHFLVRFLVKQR-SPSSISESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAF 116

Query: 201 IDALPVFLYKEIVGLKEPFDCAVCLCEFSALDKLRLLPTCSHAFHIDCIDTWLLSNSTCP 260
           IDALPVFLY EIVGLKEPFDCAVCLCEFS LDKLRLLPTCSHAFHIDCIDTWLLSNSTCP
Sbjct: 117 IDALPVFLYTEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDTWLLSNSTCP 176

Query: 261 LCRGTLHIHSPGLAIENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRVFSIR 320
           LCRGTL  +SPGLAIENP++GFEDSE TE S EDGR G+PTAQK PE+D+ GEKRVFSIR
Sbjct: 177 LCRGTL--YSPGLAIENPIFGFEDSEGTEGSAEDGRIGVPTAQKPPENDMYGEKRVFSIR 236

Query: 321 LGKFRNLNNGGLRGLEKGEGETSSSSLSARRCFSMGSYQYIVADSELQVALRTSNRICGG 380
           LGKFRNLNNGG+RGLEKGEGETSSSSL ARRC+SMGSYQYIVADS+LQVALRTSNR  G 
Sbjct: 237 LGKFRNLNNGGVRGLEKGEGETSSSSLGARRCYSMGSYQYIVADSDLQVALRTSNRTGGR 296

Query: 381 SMRFVKVIRDSQTGNCPIDGDDDAEGKKINIGSKNESFSVSKIWLWSKKTRQPSGSDTHV 440
           SMRFV+  RDSQTGN  I  DDDAEGKKINIGSKNESFSVSKIWLWSKK RQP GSD H+
Sbjct: 297 SMRFVRA-RDSQTGNSLI--DDDAEGKKINIGSKNESFSVSKIWLWSKKARQPIGSDVHL 353

Query: 441 RAS 444
           RA+
Sbjct: 357 RAN 353

[Close]

BLAST of Clc05G27430 vs. ExPASy TrEMBL
Match: A0A6J1FN91 (RING-H2 finger protein ATL46-like OS=Cucurbita moschata OX=3662 GN=LOC111447334 PE=4 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 4.2e-131
Identity = 269/360 (74.72%), Postives = 290/360 (80.56%), Query Frame = 0


Query: 88  LSPINHPFLPSSSLFCFPFRCYNAISLTHRNRSATQGFSRNSLNHMPHAV----PAPFQV 147
           +SP   P  PSSSL       YN+    ++ +SA    S + ++     V       F +
Sbjct: 14  VSPSIAPLQPSSSL------AYNS---DYQKQSALPSSSSSKISPAVLLVIVILALLFFI 73

Query: 148 DFLMTQVVRLLVKQRSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDA 207
             L+  +VRLLVKQRSS SS+ ESNSNRF EMS+SSAFQRQLQQLFHLHDSGLDQAFIDA
Sbjct: 74  SGLLHLLVRLLVKQRSSPSSIPESNSNRFLEMSDSSAFQRQLQQLFHLHDSGLDQAFIDA 133

Query: 208 LPVFLYKEIVGLKEPFDCAVCLCEFSALDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCR 267
           LPVFLYKEIVGLKEPFDCAVCLCEFS LDKLRLLP+CSHAFHIDCIDTWLLSNSTCPLCR
Sbjct: 134 LPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPLCR 193

Query: 268 GTLHIHSPGLAIENPVYGFEDSEETEESTEDG-RFGIPTAQKAPESDIIGEKRVFSIRLG 327
           GTL  +SPGLAIENPVYGFEDSEETEESTEDG R  IPTAQKAPESDI GEKRVFSIRLG
Sbjct: 194 GTL--YSPGLAIENPVYGFEDSEETEESTEDGRRISIPTAQKAPESDINGEKRVFSIRLG 253

Query: 328 KFRNLN-NGGLRGLEKGEGET-SSSSLSARRCFSMGSYQYIVADSELQVALRTSNRICGG 387
           KFRNLN NGG+RGLEKGEGET SSSSL ARRC+SMGSYQYIVADSELQVAL TSN     
Sbjct: 254 KFRNLNSNGGVRGLEKGEGETSSSSSLGARRCYSMGSYQYIVADSELQVALSTSN----- 313

Query: 388 SMRFVKVIRDSQTGNCPIDGDDDAEGKKINIGSKNESFSVSKIWLWSKKTRQPSGSDTHV 441
                  +RDSQTGNC +D DD+AEGKKI IGSKNESFSVSKIWLWSKK RQPSG+DTHV
Sbjct: 314 -------LRDSQTGNCSVD-DDNAEGKKIKIGSKNESFSVSKIWLWSKKGRQPSGADTHV 349

[Close]

BLAST of Clc05G27430 vs. TAIR 10
Match: AT1G23980.1 (RING/U-box superfamily protein )

HSP 1 Score: 285.0 bits (728), Expect = 1.0e-76
Identity = 176/337 (52.23%), Postives = 214/337 (63.50%), Query Frame = 0


Query: 105 PFRCYNAISLTHR---NRSATQGFSRNSLNHMPHAVPAPFQVDFLMTQVVRLLV----KQ 164
           P    + I+L H+   + S++     N ++ +   +     V F +  ++ LLV    K+
Sbjct: 21  PSSAPSPITLNHQLTDSSSSSSSGGNNRISPIILFIIVLLSVIFFICSILHLLVRYYLKK 80

Query: 165 RSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIVGLKE 224
           + S+ S S + SN+ PE S+S  +QRQLQQLFHLHDSGLDQA IDALPVFLYKEI G KE
Sbjct: 81  KRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTKE 140

Query: 225 PFDCAVCLCEFSALDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCRGTLHIHSPGLAIEN 284
           PFDCAVCLCEFS  DKLRLLP CSHAFHIDCIDTWLLSNSTCPLCRGTL   S G   E 
Sbjct: 141 PFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTL--FSLGHQFEY 200

Query: 285 PVYGFEDSEETEESTEDGRFGIPTA--QKAPESDIIGEKRVFSIRLGKFRN---LNNGGL 344
           P + F        + +DG  G+  +  QK  E++I   KRVFS+RLGKFR+   +NNG +
Sbjct: 201 PDFNFGFF-----AGDDGGGGVRVSPVQKPAENEI--GKRVFSVRLGKFRSSNIVNNGEV 260

Query: 345 RGLEKGEGETSSSSLSARRCFSMGSYQYIVADSELQVALRTSNRICGGSMRFVKVIRDSQ 404
             +  G GETSSSSL  RRCFSMGSYQYIVA+S+L VAL  +N                 
Sbjct: 261 --VVGGGGETSSSSLDNRRCFSMGSYQYIVAESDLVVALCPNNE---------------- 320

Query: 405 TGNCPIDGDDDAEGKKINIGSKNESFSVSKIWLWSKK 430
                +  + D EGKKIN+ SK ESFSVSKIW WS K
Sbjct: 321 ----GLKNNKDVEGKKINMRSKGESFSVSKIWQWSNK 326

[Close]

BLAST of Clc05G27430 vs. TAIR 10
Match: AT5G40250.1 (RING/U-box superfamily protein )

HSP 1 Score: 283.9 bits (725), Expect = 2.2e-76
Identity = 174/318 (54.72%), Postives = 215/318 (67.61%), Query Frame = 0


Query: 141 FQVDFLMTQVVRLLVKQRSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAF 200
           F +  L+  +VR L+K  S+++S   S SNRFPE+S S A QRQLQQLFHL+DSGLDQAF
Sbjct: 56  FFISGLLHLLVRFLIKHPSATAS---SRSNRFPEISTSDALQRQLQQLFHLNDSGLDQAF 115

Query: 201 IDALPVFLYKEIVG----------LKEPFDCAVCLCEFSALDKLRLLPTCSHAFHIDCID 260
           IDALPVF YKEIVG           +EPFDCAVCLCEFS  DKLRLLP CSHAFH++CID
Sbjct: 116 IDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCID 175

Query: 261 TWLLSNSTCPLCRGTLHIHSPGLAIENPVYGFEDSEETEES-TEDGRFGIPTAQKAPE-S 320
           TWL SNSTCPLCRGTL   SPG ++ENP++ F+D  E EE  TE+G      +QK  E  
Sbjct: 176 TWLQSNSTCPLCRGTL--FSPGFSMENPMFDFDDIREDEEGVTENG------SQKTMEIQ 235

Query: 321 DIIGEKRVFSIRLGKFRNLNN-GGLRGLE-KGEGETSSSSLSARRCFSMGSYQYIVADSE 380
           +I+ EK V  +RLGKF+ L+N G  +G +    GETSSS+L ARRCFSMGSYQYI+ +SE
Sbjct: 236 EIVVEKGVLPVRLGKFKRLDNVGNGQGQDVVAGGETSSSNLDARRCFSMGSYQYILGNSE 295

Query: 381 LQVALRTSNRICGGSMRFVKVIRDS-QTGNCPIDGDDDAEGKKINIGSKNESFSVSKIWL 440
           L+V    ++R+     R     ++S QTGN         + KKIN  +K ESFSVSKIWL
Sbjct: 296 LKVPF-ANDRL----PRLKPQDKESEQTGN-----SSSEDNKKINTVAKGESFSVSKIWL 352

Query: 441 WSKKTRQPSGSDTHVRAS 444
           W KK +  S +   + +S
Sbjct: 356 WPKKDKFSSDAQRRLPSS 352

[Close]

BLAST of Clc05G27430 vs. TAIR 10
Match: AT4G30400.1 (RING/U-box superfamily protein )

HSP 1 Score: 188.7 bits (478), Expect = 9.8e-48
Identity = 137/337 (40.65%), Postives = 175/337 (51.93%), Query Frame = 0


Query: 145 FLMTQVVRLLVKQRSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDAL 204
           F ++ ++ LLV+       ++ S+ +R       +A Q QLQQLFHLHDSG+DQ+FID L
Sbjct: 62  FFISGLLHLLVR-----FLLTPSSRDREDYFDNVTALQGQLQQLFHLHDSGVDQSFIDTL 121

Query: 205 PVFLYKEIVGLKE-PFDCAVCLCEFSALDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCR 264
           PVF YK I+GLK  PFDCAVCLCEF   DKLRLLP CSHAFH+DCIDTWLLS+STCPLCR
Sbjct: 122 PVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCR 181

Query: 265 GTLHIHSPGLAIENPVYGF---EDSEETEESTEDGRFGIPTAQKAPESDI---------- 324
            +L   S   + ++P   F    +S     S E G      A  A   DI          
Sbjct: 182 SSL--LSDLSSHQDPRSSFLLVLESASDHSSREIGGDRDSAACVAANDDIDVSSAHLGLV 241

Query: 325 ----IGEKRV----------------------FSIRLGKFRNLNNGGLRGLEKGEGETSS 384
               +G  R+                      FS++LGKFRN++ G   G        +S
Sbjct: 242 GNNDLGSTRIDSGHGDQYLDGELGGSVGKVVPFSVKLGKFRNIDIG--EGTSSNNNIGNS 301

Query: 385 SSLSARRCFSMGSYQYIV-ADSELQVALRT-----SNRICGGSMRFVKVIRDSQTGNCPI 432
           SSL  RRCFSMGSY+YI+  ++ L+V + T      NR   G    +       TG    
Sbjct: 302 SSLDERRCFSMGSYEYIMDEETTLKVHVSTKKQSSKNRGLPGHRTAMSECGFDPTGRLKF 361

[Close]

BLAST of Clc05G27430 vs. TAIR 10
Match: AT2G18650.1 (RING/U-box superfamily protein )

HSP 1 Score: 182.6 bits (462), Expect = 7.0e-46
Identity = 125/319 (39.18%), Postives = 176/319 (55.17%), Query Frame = 0


Query: 145 FLMTQVVRLLVKQRSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDAL 204
           F ++ ++ +LVK       ++ S  +R       +A Q QLQQLF+LHDSG+DQ+ ID L
Sbjct: 54  FFISGLLHILVK-----FLLTPSRESREDYFDNVTALQGQLQQLFNLHDSGVDQSLIDTL 113

Query: 205 PVFLYKEIVGLK-EPFDCAVCLCEFSALDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCR 264
           PVF YK IVGLK  PFDC VCLCEF   DKLRLLP CSHAFH++CIDTWLLS+STCPLCR
Sbjct: 114 PVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCR 173

Query: 265 GTL--------HIHSPGLAI---------------ENPVYGFEDSEETEESTEDGRFGIP 324
             L        ++ S  L +                N   G++ + ++E +    R G  
Sbjct: 174 SNLLSGFSSHHNLSSSYLLVLESEQSSRDMVPVLESNSQLGYDVNNDSESTRI--RSGRK 233

Query: 325 TAQKAPESDIIGEKRV-FSIRLGKFRNLNNGGLRGLEKGEGETS--SSSLSARRCFSMGS 384
           +     + D + EK V   ++LGKFRN+++ G  G ++ +   S  S ++  RRC SMGS
Sbjct: 234 SCDPDGDMDGLDEKVVPLEVKLGKFRNIDHVG-EGSDQKKNSISGNSKNVDGRRCLSMGS 293

Query: 385 YQYIVADSELQVALRTSNRICGGSMRFVKVIRDSQTGNCPIDGDDDAEGKKINIGSKNES 437
           Y+YI+ D E  + +  S +   G  R    +   +T       D   +G + ++  + ES
Sbjct: 294 YEYIM-DQEATLKVHVSTKKLSGKDR----VPSHRTVMSECGFDPTVKGIEKSV-VERES 353

[Close]

BLAST of Clc05G27430 vs. TAIR 10
Match: AT3G48030.1 (hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 163.7 bits (413), Expect = 3.4e-40
Identity = 102/226 (45.13%), Postives = 132/226 (58.41%), Query Frame = 0


Query: 158 RSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKEI-VGLK 217
           R SS+     + N  P++   S+   QLQ LF LHDSGLDQ  IDALPVFLY  + + L+
Sbjct: 145 RKSSTLFPIPHFNYNPDLFSFSS--PQLQHLFFLHDSGLDQTAIDALPVFLYGNVTISLE 204

Query: 218 EPFDCAVCLCEFSALDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCRGTL------HIHS 277
           +PFDCAVCL EFS  DKLRLLP CSHAFH+ CIDTWLLSNSTCPLCR +L      + HS
Sbjct: 205 QPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSLSTSNVCYNHS 264

Query: 278 PGLAIENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRVFSIRLGKFRNLNNG 337
             L    P+ G        +  +DG+  +              KRVFS+RLG+F++ N  
Sbjct: 265 ETLVA--PLSG-------HQQVDDGKASL-------------AKRVFSVRLGRFKSTNES 324

Query: 338 GLRGLEKGEGETSSSSLSARRCFSMGSYQYIVADSELQVALRTSNR 377
                ++ + +        RRC+SMG+ QY+V D +  VAL +S R
Sbjct: 325 ---QSQRHDVKDEIGVRMPRRCYSMGTQQYLVCDQDFVVALSSSPR 343

The following BLAST results are available for this feature:

BLAST of Clc05G27430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893199.1	3.2e-149	92.28	RING-H2 finger protein ATL46-like [Benincasa hispida]	[more]
KAA0034330.1	5.6e-146	79.44	RING-H2 finger protein ATL46 [Cucumis melo var. makuwa] >TYK15589.1 RING-H2 fing...	[more]
XP_004135477.1	4.8e-145	92.15	RING-H2 finger protein ATL46 [Cucumis sativus] >KGN51821.1 hypothetical protein ...	[more]
XP_008446237.1	1.4e-144	91.81	PREDICTED: RING-H2 finger protein ATL46 [Cucumis melo]	[more]
XP_022151161.1	3.4e-135	84.16	RING-H2 finger protein ATL47 [Momordica charantia] >XP_022151162.1 RING-H2 finge...	[more]

BLAST of Clc05G27430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GW38	1.4e-75	52.23	RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1	[more]
Q9FL07	3.2e-75	54.72	RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1	[more]
Q940Q4	1.4e-46	40.65	RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2	[more]
Q9ZV53	9.9e-45	39.18	Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 P...	[more]
Q7X843	4.8e-39	45.13	RING-H2 finger protein ATL48 OS=Arabidopsis thaliana OX=3702 GN=ATL48 PE=1 SV=2	[more]

BLAST of Clc05G27430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CZH7	2.7e-146	79.44	RING-H2 finger protein ATL46 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0KVN9	2.3e-145	92.15	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G602200 P...	[more]
A0A1S3BE30	6.7e-145	91.81	RING-H2 finger protein ATL46 OS=Cucumis melo OX=3656 GN=LOC103489027 PE=4 SV=1	[more]
A0A6J1DCR2	1.7e-135	84.16	RING-H2 finger protein ATL47 OS=Momordica charantia OX=3673 GN=LOC111019155 PE=4...	[more]
A0A6J1FN91	4.2e-131	74.72	RING-H2 finger protein ATL46-like OS=Cucurbita moschata OX=3662 GN=LOC111447334 ...	[more]

BLAST of Clc05G27430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23980.1	1.0e-76	52.23	RING/U-box superfamily protein	[more]
AT5G40250.1	2.2e-76	54.72	RING/U-box superfamily protein	[more]
AT4G30400.1	9.8e-48	40.65	RING/U-box superfamily protein	[more]
AT2G18650.1	7.0e-46	39.18	RING/U-box superfamily protein	[more]
AT3G48030.1	3.4e-40	45.13	hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family ...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 221..262 e-value: 1.6E-6 score: 37.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 220..263 e-value: 6.5E-12 score: 45.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 221..263 score: 12.1057
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 180..268 e-value: 1.3E-19 score: 71.6
None	No IPR available	PANTHER	PTHR45768:SF54	RING-H2 FINGER PROTEIN ATL47-RELATED	coord: 146..438
None	No IPR available	PANTHER	PTHR45768	E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE	coord: 146..438
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 220..263 e-value: 2.22671E-18 score: 76.1865
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 200..269

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G27430.2	Clc05G27430.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0031625	ubiquitin protein ligase binding