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Clc05G26470 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTAGAATTCTTTTTCCCCATGTTGTTGAGAGCTTATTTTACTATTTCAACACTACCCTTTTTGCACCCAGCGGGTTTACTTTTAGGTGCCAGTACCTTAGAAAAGTGTTGGTCTGTAGTGACGGTGGTTAATTAGTCACAGCCAGCCCTTTTCCCTCCCTCAGAATTTCTATATATTGTCCCCTCAACTCTCCTTATTTCTCACTCCTCTGCTTCTTTCTGTTCCTTCATTTCTTACTTCTTTCCTTCTGGTAATCATCTTGTTCTCTCTCTCTCTCTCTCTCACACGAACACACATTTTCTTTAGCTCTAATGCAATCATGTTAGTTTGAAAATGGGAAAAGAGAAATGGAAGATTTGCTGAAACTTGAACTTTCTCTTTTGTAGGAATGGCTTCCGTCCTTATCTTTTTGGCAGGTTTCTATGCCATAGTTTCCTCTGTTGATGCTTATGCAGGTGGAGGCTGGACTGGGGCTCACGCCACCTTCTATGGTGGGAGTGATGCTTCTGGGACAATGGGTATGCACCAAAACAAACCATTTTTCATTCATGACCTCTGTGAGCACTTTTTTACAAACAGCTGGGGCGGACAATGTGAAAAAAGGCTGAACTTTTTTGTGTTTGATGAAATTGTGCAGGTGGGGCTTGTGGGTATGGCAACTTATACAGCCAAGGATATGGAACAAACACTGCTGCTTTGAGTACGGCTCTATTCAACAATGGCTTGAGCTGTGGCTCTTGCTACGAGATTAGGTGCGCCAGTGACCCTAAATGGTGCTTGCCAGGCTCCATTGTGGTCACAGCCACCAATTTCTGCCCTCCAAACAATGCCCTTCCCAACAACGCTGGAGGCTGGTGCAACCCTCCTCTTCAACACTTTGATCTCTCTCAACCTGTATTCCAACACATTGCTCAGTACAGAGCAGGAATTGTGCCTGTTGCTTACAGAAGGTCAGCAAGCCATTAAAACAGAGTTTTAAAATGCAGGGGATGTATTACAAAGTCATTTAATTTAACAAGTTTCTGTGGGGTTTCTTTTTTGTAGGGTACCCTGCAGGAGAAGAGGAGGCATAAGGTTCACCATCAATGGGCACTCCTACTTCAACTTAGTCCTCATCACAAACGTGGGTGGTGCTGGTGATGTACACGCAGTTTCCATCAAAGGATCAAGAACTGGTTGGCAAGCAATGTCAAGGAACTGGGGACAGAACTGGCAGAGTAACAGCTACCTCAATGGTCAAAGCCTCTCCTTCAAGGTAACCACCAGCGACGGCCGAACCGTCATCTCCAACAACGCTGTCCCAGCTGGCTGGTCCTTTGGACAGACTTACAATGGTGCCCAATTCTGATTTATTAGATCCTCTAGCTAAAATAAGCTTTATGGTTATGCAGAGTAAAGCAATCTAGTGTGACTTCTTATTTTTTCCTTTTTCTTTACCTTAAAGTATACTTGAGTATTAGATATATAGTATACTATGTGAGTGTTTGAGTCAAAAAATGAGGAAAGGGCTTATTTTGGGAGGCTCTTTCTTATCATTTTGATTCAAATTTCAACATTGAATGAGTGCCCTAATGGCTACTTATTGTGATTTTTTACCCTAACTTTTGCTATAAAGCAAAAGTTGGCAGAGGTGGGCTCTAACCACCCGCCTGCATTTTAGTTACTATTGTGAGTTCATTGTAATCATTAATCAGCTTTCTGCCGCGCTACTTGTATTTGTTGTATTATTGGTTGCTGAAAGTGTAAATTTTCAGTTTCCTCAAGTAATGAAAGACCTCAGACTTTTATTTAATTGTGCTCTGTTCCTCTGTTTTTGTATTAATGTTTTCAATCTCTTTGTGTGCGGCTGGCTTCCTCTGTTATTCTTTCTCCCATCTGCCCCCCAAAGTAAAAAGTTAACTCACATTAATCATAAACAAAATCATGTAATTTGTATGGTAAAAGGTCATTCGAGCATGACTTAGTGTTAAGGCACCATTATTTAGCTCAAAGGTCAATGGCTCAATTCCCTACTTCGTAATTGTTAAAACTAAAAAAAGTAATAATTTCTTTGATTGTCCCCCCGTCTGGGTCTCTAAACGTTGAACTCGAAGGCCAATTGTTTAGAACCCAAGCCTTGGAAATTCTGCTGAAACATTTGGTAATGAAATTTGTATGGTTATTCTAATCCATCGTCTTCATGGAGTTTAGAGGGTCTGTTCAAGGTCTATGTACAGTGTAAAGCTAGAAGTTTTAATCCAATAAAACCATTTGTAAACAAGGGATCCATATTTGAAGTTGAAAATGAAAATTTTGAAATGTTATCTCATCACCAAAATTTTCGTGAATTGATAGTCTATCTATGGTTGTGGTTGTGCAATAAAAGAAATAAGAAATCAAAAAATTATTTGCTTTTATTCTTGGTCTCTGTCGTATAGGACAGACAAGTTACTAAACATGTTGAATTAGTATCAGCCAACTGAAGAAGACGTTTAACTATAACTTGTATGCTATGTTGCTATTTTTATTTACAGCTCCATGTCAGTGGGAGCAAATGAAAGGCAGTAGGTTAGCTGCCAAAAAGACAGACAGGGATAAAGCAAAAACAAAAACAACTCCTTGAAACCTCATTTCATGGAGAGTAAGCACCGAGCCTCCTTTGCCCGGTGACAGCCGCCTCTAGGGGGTAATTCTGAAATAGTGTGTGTGCTATCGGCTTCTTGCTGTATGCTATAGTTGCTTGGTATAGATGAACTTGAACGAGACAAGAGTTGAACATAGTTCAAAATCATCCTCAAGCTATCAGGTACGCGATCAACTGTTCCAGAATTACTATACTGTAGTATGTATAACATAAGTTCAGTTAGTTGCTGCTAGAAATGAAATGCTAGCTTTGACAAAGTTGAAATCTATCAGTCACTCAGTATTCGACTTGTG TTAGAATTCTTTTTCCCCATGTTGTTGAGAGCTTATTTTACTATTTCAACACTACCCTTTTTGCACCCAGCGGGTTTACTTTTAGGTGCCAGTACCTTAGAAAAGTGTTGGTCTGTAGTGACGGTGGTTAATTAGTCACAGCCAGCCCTTTTCCCTCCCTCAGAATTTCTATATATTGTCCCCTCAACTCTCCTTATTTCTCACTCCTCTGCTTCTTTCTGTTCCTTCATTTCTTACTTCTTTCCTTCTGGAATGGCTTCCGTCCTTATCTTTTTGGCAGGTTTCTATGCCATAGTTTCCTCTGTTGATGCTTATGCAGGTGGAGGCTGGACTGGGGCTCACGCCACCTTCTATGGTGGGAGTGATGCTTCTGGGACAATGGGTGGGGCTTGTGGGTATGGCAACTTATACAGCCAAGGATATGGAACAAACACTGCTGCTTTGAGTACGGCTCTATTCAACAATGGCTTGAGCTGTGGCTCTTGCTACGAGATTAGGTGCGCCAGTGACCCTAAATGGTGCTTGCCAGGCTCCATTGTGGTCACAGCCACCAATTTCTGCCCTCCAAACAATGCCCTTCCCAACAACGCTGGAGGCTGGTGCAACCCTCCTCTTCAACACTTTGATCTCTCTCAACCTGTATTCCAACACATTGCTCAGTACAGAGCAGGAATTGTGCCTGTTGCTTACAGAAGGGTACCCTGCAGGAGAAGAGGAGGCATAAGGTTCACCATCAATGGGCACTCCTACTTCAACTTAGTCCTCATCACAAACGTGGGTGGTGCTGGTGATGTACACGCAGTTTCCATCAAAGGATCAAGAACTGGTTGGCAAGCAATGTCAAGGAACTGGGGACAGAACTGGCAGAGTAACAGCTACCTCAATGGTCAAAGCCTCTCCTTCAAGGTAACCACCAGCGACGGCCGAACCGTCATCTCCAACAACGCTGTCCCAGCTGGCTGGTCCTTTGGACAGACTTACAATGCTCCATGTCAGTGGGAGCAAATGAAAGGCAGTAGGTTAGCTGCCAAAAAGACAGACAGGGATAAAGCAAAAACAAAAACAACTCCTTGAAACCTCATTTCATGGAGAGTAAGCACCGAGCCTCCTTTGCCCGGTGACAGCCGCCTCTAGGGGGTAATTCTGAAATAGTGTGTGTGCTATCGGCTTCTTGCTGTATGCTATAGTTGCTTGGTATAGATGAACTTGAACGAGACAAGAGTTGAACATAGTTCAAAATCATCCTCAAGCTATCAGGTACGCGATCAACTGTTCCAGAATTACTATACTGTAGTATGTATAACATAAGTTCAGTTAGTTGCTGCTAGAAATGAAATGCTAGCTTTGACAAAGTTGAAATCTATCAGTCACTCAGTATTCGACTTGTG ATGGCTTCCGTCCTTATCTTTTTGGCAGGTTTCTATGCCATAGTTTCCTCTGTTGATGCTTATGCAGGTGGAGGCTGGACTGGGGCTCACGCCACCTTCTATGGTGGGAGTGATGCTTCTGGGACAATGGGTGGGGCTTGTGGGTATGGCAACTTATACAGCCAAGGATATGGAACAAACACTGCTGCTTTGAGTACGGCTCTATTCAACAATGGCTTGAGCTGTGGCTCTTGCTACGAGATTAGGTGCGCCAGTGACCCTAAATGGTGCTTGCCAGGCTCCATTGTGGTCACAGCCACCAATTTCTGCCCTCCAAACAATGCCCTTCCCAACAACGCTGGAGGCTGGTGCAACCCTCCTCTTCAACACTTTGATCTCTCTCAACCTGTATTCCAACACATTGCTCAGTACAGAGCAGGAATTGTGCCTGTTGCTTACAGAAGGGTACCCTGCAGGAGAAGAGGAGGCATAAGGTTCACCATCAATGGGCACTCCTACTTCAACTTAGTCCTCATCACAAACGTGGGTGGTGCTGGTGATGTACACGCAGTTTCCATCAAAGGATCAAGAACTGGTTGGCAAGCAATGTCAAGGAACTGGGGACAGAACTGGCAGAGTAACAGCTACCTCAATGGTCAAAGCCTCTCCTTCAAGGTAACCACCAGCGACGGCCGAACCGTCATCTCCAACAACGCTGTCCCAGCTGGCTGGTCCTTTGGACAGACTTACAATGCTCCATGTCAGTGGGAGCAAATGAAAGGCAGTAGGTTAGCTGCCAAAAAGACAGACAGGGATAAAGCAAAAACAAAAACAACTCCTTGA MASVLIFLAGFYAIVSSVDAYAGGGWTGAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIRCASDPKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPLQHFDLSQPVFQHIAQYRAGIVPVAYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVISNNAVPAGWSFGQTYNAPCQWEQMKGSRLAAKKTDRDKAKTKTTP Homology
BLAST of Clc05G26470 vs. NCBI nr
Match: XP_008446373.1 (PREDICTED: expansin-A1 [Cucumis melo] >KAA0034431.1 expansin-A1 [Cucumis melo var. makuwa] >TYK17703.1 expansin-A1 [Cucumis melo var. makuwa]) HSP 1 Score: 502.7 bits (1293), Expect = 2.0e-138 Identity = 241/244 (98.77%), Postives = 244/244 (100.00%), Query Frame = 0
BLAST of Clc05G26470 vs. NCBI nr
Match: XP_038891324.1 (expansin-A1 [Benincasa hispida]) HSP 1 Score: 501.9 bits (1291), Expect = 3.5e-138 Identity = 240/244 (98.36%), Postives = 244/244 (100.00%), Query Frame = 0
BLAST of Clc05G26470 vs. NCBI nr
Match: QDL52545.1 (expansin A1 [Cucumis melo]) HSP 1 Score: 499.6 bits (1285), Expect = 1.7e-137 Identity = 240/244 (98.36%), Postives = 243/244 (99.59%), Query Frame = 0
BLAST of Clc05G26470 vs. NCBI nr
Match: XP_004135171.1 (expansin-A1 [Cucumis sativus] >KGN51933.1 hypothetical protein Csa_007784 [Cucumis sativus]) HSP 1 Score: 498.8 bits (1283), Expect = 2.9e-137 Identity = 238/244 (97.54%), Postives = 243/244 (99.59%), Query Frame = 0
BLAST of Clc05G26470 vs. NCBI nr
Match: XP_022985080.1 (expansin-A1 [Cucurbita maxima] >XP_023517096.1 expansin-A1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 497.7 bits (1280), Expect = 6.5e-137 Identity = 238/244 (97.54%), Postives = 242/244 (99.18%), Query Frame = 0
BLAST of Clc05G26470 vs. ExPASy Swiss-Prot
Match: Q9C554 (Expansin-A1 OS=Arabidopsis thaliana OX=3702 GN=EXPA1 PE=2 SV=1) HSP 1 Score: 439.5 bits (1129), Expect = 2.8e-122 Identity = 206/238 (86.55%), Postives = 219/238 (92.02%), Query Frame = 0
BLAST of Clc05G26470 vs. ExPASy Swiss-Prot
Match: Q9LDR9 (Expansin-A10 OS=Arabidopsis thaliana OX=3702 GN=EXPA10 PE=2 SV=1) HSP 1 Score: 426.0 bits (1094), Expect = 3.2e-118 Identity = 201/230 (87.39%), Postives = 214/230 (93.04%), Query Frame = 0
BLAST of Clc05G26470 vs. ExPASy Swiss-Prot
Match: O80622 (Expansin-A15 OS=Arabidopsis thaliana OX=3702 GN=EXPA15 PE=2 SV=2) HSP 1 Score: 416.4 bits (1069), Expect = 2.5e-115 Identity = 196/238 (82.35%), Postives = 213/238 (89.50%), Query Frame = 0
BLAST of Clc05G26470 vs. ExPASy Swiss-Prot
Match: O22874 (Expansin-A8 OS=Arabidopsis thaliana OX=3702 GN=EXPA8 PE=2 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 3.6e-106 Identity = 176/221 (79.64%), Postives = 197/221 (89.14%), Query Frame = 0
BLAST of Clc05G26470 vs. ExPASy Swiss-Prot
Match: Q9FMA0 (Expansin-A14 OS=Arabidopsis thaliana OX=3702 GN=EXPA14 PE=2 SV=1) HSP 1 Score: 380.9 bits (977), Expect = 1.2e-104 Identity = 178/227 (78.41%), Postives = 197/227 (86.78%), Query Frame = 0
BLAST of Clc05G26470 vs. ExPASy TrEMBL
Match: A0A5D3D0I6 (Expansin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00310 PE=3 SV=1) HSP 1 Score: 502.7 bits (1293), Expect = 9.9e-139 Identity = 241/244 (98.77%), Postives = 244/244 (100.00%), Query Frame = 0
BLAST of Clc05G26470 vs. ExPASy TrEMBL
Match: A0A1S3BEF0 (Expansin OS=Cucumis melo OX=3656 GN=LOC103489135 PE=3 SV=1) HSP 1 Score: 502.7 bits (1293), Expect = 9.9e-139 Identity = 241/244 (98.77%), Postives = 244/244 (100.00%), Query Frame = 0
BLAST of Clc05G26470 vs. ExPASy TrEMBL
Match: A0A515EIP7 (Expansin OS=Cucumis melo OX=3656 GN=EXPA1 PE=2 SV=1) HSP 1 Score: 499.6 bits (1285), Expect = 8.3e-138 Identity = 240/244 (98.36%), Postives = 243/244 (99.59%), Query Frame = 0
BLAST of Clc05G26470 vs. ExPASy TrEMBL
Match: A0A0A0KQP2 (Expansin OS=Cucumis sativus OX=3659 GN=Csa_5G605760 PE=3 SV=1) HSP 1 Score: 498.8 bits (1283), Expect = 1.4e-137 Identity = 238/244 (97.54%), Postives = 243/244 (99.59%), Query Frame = 0
BLAST of Clc05G26470 vs. ExPASy TrEMBL
Match: A0A6J1JAD1 (Expansin OS=Cucurbita maxima OX=3661 GN=LOC111483155 PE=3 SV=1) HSP 1 Score: 497.7 bits (1280), Expect = 3.2e-137 Identity = 238/244 (97.54%), Postives = 242/244 (99.18%), Query Frame = 0
BLAST of Clc05G26470 vs. TAIR 10
Match: AT1G69530.1 (expansin A1 ) HSP 1 Score: 439.5 bits (1129), Expect = 2.0e-123 Identity = 206/238 (86.55%), Postives = 219/238 (92.02%), Query Frame = 0
BLAST of Clc05G26470 vs. TAIR 10
Match: AT1G69530.3 (expansin A1 ) HSP 1 Score: 439.5 bits (1129), Expect = 2.0e-123 Identity = 206/238 (86.55%), Postives = 219/238 (92.02%), Query Frame = 0
BLAST of Clc05G26470 vs. TAIR 10
Match: AT1G69530.2 (expansin A1 ) HSP 1 Score: 439.5 bits (1129), Expect = 2.0e-123 Identity = 206/238 (86.55%), Postives = 219/238 (92.02%), Query Frame = 0
BLAST of Clc05G26470 vs. TAIR 10
Match: AT1G69530.4 (expansin A1 ) HSP 1 Score: 439.5 bits (1129), Expect = 2.0e-123 Identity = 206/238 (86.55%), Postives = 219/238 (92.02%), Query Frame = 0
BLAST of Clc05G26470 vs. TAIR 10
Match: AT1G26770.1 (expansin A10 ) HSP 1 Score: 426.0 bits (1094), Expect = 2.3e-119 Identity = 201/230 (87.39%), Postives = 214/230 (93.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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