Clc05G26020 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G26020
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	PLASMODESMATA CALLOSE-BINDING PROTEIN 3
Location	ClcChr05: 33689038 .. 33690683 (-)
RNA-Seq Expression	Clc05G26020
Synteny	Clc05G26020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAATTTTACATTTTAAAATTTTTTAAATAAATAAAAAAAAAAAAGCCTAAAACTTAGCCTACTCGTGCTCGTATATAATAATGACCCTTCCCTTCTAATGTTCTTTAATTTCTGTCAAAAAAAAAGAAAAAAAAAACTCAAGAAACCTTTTCCTCACCACTCTCCTCTCCCTTGGCTCTCACTTTCTTGTCCTCCACTGAATCTGAGCTCTCTTTTTAGGGTTCTTCAAGTTTTTGAGCTTCAGTATTGCTTCTAATCATGGCTGTTTTCGTGTTCTTAGTGTTTGTTCTTGCGCTAACTGGTCGATCTTGTAAGTTCCAACTTGGGTTTCTTACAAGTAGTTCCTTCAGGGGTTTTTTTCTCTTGATATTTTCCTTTATGGGTTTTCATTAATCCTGGTTTTTTTCCTCTTTCAGATGCCAACTATTGCTTGTGTAGAGATGGGGCAACCCAACAAGCCCTTCAGAAGGCACTGGACTATGCTTGTGGAGCTGGAGCTGACTGTTCTCCAATCCTCTCCAGTGGCGCTTGTTTTCAGCCCAACACTGTCAAAGATCACTGTAATTACGCTGTCAATAGTTATTTCCAGCGAAAGGGGCAAGTCCAAGGAAGCTGTGACTTTAATGGCGCCGCCACGCCCAGCGTTACCCTTACTGCCTGTAAGCCGGACCCTCGAAATTTCCCTTTTCCCCTGTTTTCACCATTTTTTTCTTATCCTCTCTTTCGCTGATTTCATCTTCTTCCTTGTGGGTTTGTGGCAGCTGTGCCCTCTGGTTGTGTCTATCCTTCTAGCCCCAGGTACTTTTTCTAAGCTTGATTCCTCTGTAGCTTTCAGATTTAATTAGATTTGGCTATATTTTCCCTGTACCTGTTAATTGTATCCATCAATTTCTTTGAACTTGAATGTCGCCATTTTTTACTTATATCAGAGATTTGTCGGTGATGGGTTTACGTTTCAATGCTGCCGTCTGGGTTTTGGGGAAGACAATTTAGAAAAGGAAAGAATAAAATTGGGTGATGTTGTAATTATTAGATCTAATGAACGTTATACGAACTGACCTGAACCACTCCCTTCTAGTGCCGTGAGCTGTCCATGATGATGATATTTCTCGTCAATTCTGCTTGTCGTCTTGTTCTCCAGATCTCCCGATTCCCTTTCCATCTGTTGTCGACATGTCGTTTGTTGTTGAATTAAAGCTTGAATCGTGCTTGTATTACAATTATTCTACTTTTTTTTGTCTTACTAGTTTTTGTTTTTTTTGTTTTATTTAAGCAATGCGGGAACATCGCCGACGAACTCCGGCGGAACCACACCGACGATGACACCAGGGACGCCGTCGACGACGAATCCAGGAATGACGCCGACGGTGTTCGGCAACGGAATCAGCCCGAGTGGGAGCGGCTCCGGTTTCAACGACGGCAGCGGCAGCGTGGGTTTCAATGAAAAGAGGAACTTGCTTTTGGCAGTGGGCCTAACTCTGTGGCTTTCCGTATTGTTTCTCTGGGGATGATGAAAATGGCGGATCGGATGGTGGATCTCGATGGTTGAGATTTTGCCACGTATGTAGGGGGAGGGGGTTACTTTTGACAATTGGCTGTGGAAGGAAGAATCTAGAGGCAAACCCCACTAGGGTTTTTTTTTTTT

mRNA sequence

TAAATTTTACATTTTAAAATTTTTTAAATAAATAAAAAAAAAAAAGCCTAAAACTTAGCCTACTCGTGCTCGTATATAATAATGACCCTTCCCTTCTAATGTTCTTTAATTTCTGTCAAAAAAAAAGAAAAAAAAAACTCAAGAAACCTTTTCCTCACCACTCTCCTCTCCCTTGGCTCTCACTTTCTTGTCCTCCACTGAATCTGAGCTCTCTTTTTAGGGTTCTTCAAGTTTTTGAGCTTCAGTATTGCTTCTAATCATGGCTGTTTTCGTGTTCTTAGTGTTTGTTCTTGCGCTAACTGGTCGATCTTATGCCAACTATTGCTTGTGTAGAGATGGGGCAACCCAACAAGCCCTTCAGAAGGCACTGGACTATGCTTGTGGAGCTGGAGCTGACTGTTCTCCAATCCTCTCCAGTGGCGCTTGTTTTCAGCCCAACACTGTCAAAGATCACTGTAATTACGCTGTCAATAGTTATTTCCAGCGAAAGGGGCAAGTCCAAGGAAGCTGTGACTTTAATGGCGCCGCCACGCCCAGCGTTACCCTTACTGCCTCTGTGCCCTCTGGTTGTGTCTATCCTTCTAGCCCCAGCAATGCGGGAACATCGCCGACGAACTCCGGCGGAACCACACCGACGATGACACCAGGGACGCCGTCGACGACGAATCCAGGAATGACGCCGACGGTGTTCGGCAACGGAATCAGCCCGAGTGGGAGCGGCTCCGGTTTCAACGACGGCAGCGGCAGCGTGGGTTTCAATGAAAAGAGGAACTTGCTTTTGGCAGTGGGCCTAACTCTGTGGCTTTCCGTATTGTTTCTCTGGGGATGATGAAAATGGCGGATCGGATGGTGGATCTCGATGGTTGAGATTTTGCCACGTATGTAGGGGGAGGGGGTTACTTTTGACAATTGGCTGTGGAAGGAAGAATCTAGAGGCAAACCCCACTAGGGTTTTTTTTTTTT

Coding sequence (CDS)

ATGGCTGTTTTCGTGTTCTTAGTGTTTGTTCTTGCGCTAACTGGTCGATCTTATGCCAACTATTGCTTGTGTAGAGATGGGGCAACCCAACAAGCCCTTCAGAAGGCACTGGACTATGCTTGTGGAGCTGGAGCTGACTGTTCTCCAATCCTCTCCAGTGGCGCTTGTTTTCAGCCCAACACTGTCAAAGATCACTGTAATTACGCTGTCAATAGTTATTTCCAGCGAAAGGGGCAAGTCCAAGGAAGCTGTGACTTTAATGGCGCCGCCACGCCCAGCGTTACCCTTACTGCCTCTGTGCCCTCTGGTTGTGTCTATCCTTCTAGCCCCAGCAATGCGGGAACATCGCCGACGAACTCCGGCGGAACCACACCGACGATGACACCAGGGACGCCGTCGACGACGAATCCAGGAATGACGCCGACGGTGTTCGGCAACGGAATCAGCCCGAGTGGGAGCGGCTCCGGTTTCAACGACGGCAGCGGCAGCGTGGGTTTCAATGAAAAGAGGAACTTGCTTTTGGCAGTGGGCCTAACTCTGTGGCTTTCCGTATTGTTTCTCTGGGGATGA

Protein sequence

MAVFVFLVFVLALTGRSYANYCLCRDGATQQALQKALDYACGAGADCSPILSSGACFQPNTVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTNSGGTTPTMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGSGSVGFNEKRNLLLAVGLTLWLSVLFLWG

Homology

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BLAST of Clc05G26020 vs. NCBI nr
Match: XP_038892199.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Benincasa hispida])

HSP 1 Score: 355.5 bits (911), Expect = 2.8e-94
Identity = 181/189 (95.77%), Postives = 182/189 (96.30%), Query Frame = 0


Query: 1   MAVFVFLVFVLALTGRSYANYCLCRDGATQQALQKALDYACGAGADCSPILSSGACFQPN 60
           MAV VFLVF LALTGRSYANYCLC+DG  QQALQKALDYACGAGADCSPILSSGACFQPN
Sbjct: 1   MAVLVFLVFFLALTGRSYANYCLCKDGVGQQALQKALDYACGAGADCSPILSSGACFQPN 60

Query: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTNS 120
           TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASV SGCVYPSSPSNAGTSPTNS
Sbjct: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVTSGCVYPSSPSNAGTSPTNS 120

Query: 121 GGTTPTMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGSGSVGFNEKRNLLLAVGLTL 180
           GGTTPTMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGSG VGFNE RNLLLAVGLTL
Sbjct: 121 GGTTPTMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGSGGVGFNENRNLLLAVGLTL 180

Query: 181 WLSVLFLWG 190
           WLSVLFLWG
Sbjct: 181 WLSVLFLWG 189

[Close]

BLAST of Clc05G26020 vs. NCBI nr
Match: XP_004135148.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus])

HSP 1 Score: 350.9 bits (899), Expect = 6.9e-93
Identity = 178/189 (94.18%), Postives = 179/189 (94.71%), Query Frame = 0


Query: 1   MAVFVFLVFVLALTGRSYANYCLCRDGATQQALQKALDYACGAGADCSPILSSGACFQPN 60
           MAVFVF VF LALTGRSYANYCLCRDG  Q ALQKALDYACGAGADCS ILSSGACFQPN
Sbjct: 1   MAVFVFFVFFLALTGRSYANYCLCRDGVGQSALQKALDYACGAGADCSSILSSGACFQPN 60

Query: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTNS 120
           TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTAS PSGCVYPSSPSNAGTSPTN 
Sbjct: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASAPSGCVYPSSPSNAGTSPTNG 120

Query: 121 GGTTPTMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGSGSVGFNEKRNLLLAVGLTL 180
           GGTTPTMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGSG VGFNE RNLLLAVGL+L
Sbjct: 121 GGTTPTMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGSGGVGFNENRNLLLAVGLSL 180

Query: 181 WLSVLFLWG 190
           WLSVLFLWG
Sbjct: 181 WLSVLFLWG 189

[Close]

BLAST of Clc05G26020 vs. NCBI nr
Match: XP_008446432.1 (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis melo] >KAA0034470.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis melo var. makuwa] >TYK09023.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis melo var. makuwa])

HSP 1 Score: 334.3 bits (856), Expect = 6.6e-88
Identity = 173/195 (88.72%), Postives = 177/195 (90.77%), Query Frame = 0


Query: 1   MAVFVFLVFVLALTGRSYANYCLCRDGATQQALQKALDYACGAGADCSPILSSGACFQPN 60
           MAVFVF VF LALTGRS ANYCLCRDG  Q  LQKALDYACG GADC+ ILS+GACFQPN
Sbjct: 1   MAVFVFFVFFLALTGRSCANYCLCRDGVGQSVLQKALDYACGNGADCAAILSNGACFQPN 60

Query: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTN- 120
           TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTN 
Sbjct: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTNG 120

Query: 121 -----SGGTTPTMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGSGSVGFNEKRNLLL 180
                +GGTTPTMTPGTPSTT PGMTPTVFGNGISPSGSG+GFNDGSG VGFNE RNLLL
Sbjct: 121 GTTPTNGGTTPTMTPGTPSTTTPGMTPTVFGNGISPSGSGTGFNDGSGCVGFNENRNLLL 180

Query: 181 AVGLTLWLSVLFLWG 190
           AVGLTLWLSVLFLWG
Sbjct: 181 AVGLTLWLSVLFLWG 195

[Close]

BLAST of Clc05G26020 vs. NCBI nr
Match: XP_022945109.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucurbita moschata])

HSP 1 Score: 320.9 bits (821), Expect = 7.6e-84
Identity = 165/185 (89.19%), Postives = 172/185 (92.97%), Query Frame = 0


Query: 1   MAVFVFLVFVLALTGRSYANYCLCRDGATQQALQKALDYACGAGADCSPILSSGACFQPN 60
           MAVFVFLVF LALTG+SYANYCLCRDG +QQ LQKALDYACGAGADCSPILSSGACFQPN
Sbjct: 1   MAVFVFLVFFLALTGQSYANYCLCRDGVSQQVLQKALDYACGAGADCSPILSSGACFQPN 60

Query: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTNS 120
           TVKDHC+YAVNSYFQRKGQVQGSCDF+GAATPSV+LTASVPSGCVYPSSPSNAGTSPTNS
Sbjct: 61  TVKDHCSYAVNSYFQRKGQVQGSCDFSGAATPSVSLTASVPSGCVYPSSPSNAGTSPTNS 120

Query: 121 GGTTPTMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGSGSVGFNEKRNLLLAVGLTL 180
           GGT       TP TTNPGMTPTVFGNGISPSGSG+GFNDGSG VGFNEK NLLL+VGLTL
Sbjct: 121 GGT-------TPGTTNPGMTPTVFGNGISPSGSGAGFNDGSGGVGFNEKMNLLLSVGLTL 178

Query: 181 WLSVL 186
           WLSVL
Sbjct: 181 WLSVL 178

[Close]

BLAST of Clc05G26020 vs. NCBI nr
Match: KAG7013104.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 319.7 bits (818), Expect = 1.7e-83
Identity = 164/185 (88.65%), Postives = 172/185 (92.97%), Query Frame = 0


Query: 1   MAVFVFLVFVLALTGRSYANYCLCRDGATQQALQKALDYACGAGADCSPILSSGACFQPN 60
           MAVFVFLVF LALTG+SYANYCLCRDG +QQ LQKALDYACGAGADCSPILS+GACFQPN
Sbjct: 1   MAVFVFLVFFLALTGQSYANYCLCRDGVSQQVLQKALDYACGAGADCSPILSNGACFQPN 60

Query: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTNS 120
           TVKDHC+YAVNSYFQRKGQVQGSCDF+GAATPSV+LTASVPSGCVYPSSPSNAGTSPTNS
Sbjct: 61  TVKDHCSYAVNSYFQRKGQVQGSCDFSGAATPSVSLTASVPSGCVYPSSPSNAGTSPTNS 120

Query: 121 GGTTPTMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGSGSVGFNEKRNLLLAVGLTL 180
           GGT       TP TTNPGMTPTVFGNGISPSGSG+GFNDGSG VGFNEK NLLL+VGLTL
Sbjct: 121 GGT-------TPGTTNPGMTPTVFGNGISPSGSGAGFNDGSGGVGFNEKMNLLLSVGLTL 178

Query: 181 WLSVL 186
           WLSVL
Sbjct: 181 WLSVL 178

[Close]

BLAST of Clc05G26020 vs. ExPASy Swiss-Prot
Match: Q9FZ86 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.9e-29
Identity = 81/164 (49.39%), Postives = 104/164 (63.41%), Query Frame = 0


Query: 1   MAVFVFLVFVLALTGRSYANYCLCRDGATQQALQKALDYACGAGADCSPILSSGACFQPN 60
           MAVFV ++ +LA+ G S   +C+C++G ++  LQK LDYACGAGADC PI  +G CF PN
Sbjct: 1   MAVFVLVMILLAMAGHSSGTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNPN 60

Query: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPS--GCVYPSSPSNAGTSPT 120
           TVK HC+YAVNS+FQ+KGQ  G+CDF G A    T +AS PS   C +P+S S +GT  T
Sbjct: 61  TVKSHCSYAVNSFFQKKGQSLGTCDFAGTA----TFSASDPSYTTCPFPASASGSGT--T 120

Query: 121 NSGGTTP-TMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGS 162
               TTP T  P T +T    +TP+  G    PSG    + D S
Sbjct: 121 TPVTTTPSTRVPTTTNTRPYTITPSTGGGLGIPSGINPDYTDPS 158

[Close]

BLAST of Clc05G26020 vs. ExPASy Swiss-Prot
Match: Q93V72 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.0e-26
Identity = 83/170 (48.82%), Postives = 108/170 (63.53%), Query Frame = 0


Query: 1   MAVFVFLVFVLALTGRSYANYCLCRDGATQQALQKALDYACGAGADCSPILSSGACFQPN 60
           M+V + L  ++++   S A YCLC++G  +Q LQKA+DYACG GADC+ I  +GAC+QPN
Sbjct: 1   MSVLLPLCLIISMFTYSNAAYCLCKEG-NEQVLQKAIDYACGNGADCTQIQPTGACYQPN 60

Query: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTNS 120
           TVK+HC+ AVNSY+Q+K     +CDFNGAA+PS T   S  S C+  SS S    +PT  
Sbjct: 61  TVKNHCDVAVNSYYQKKASSGATCDFNGAASPSTT-PPSTASNCLTGSSSSG---TPTTG 120

Query: 121 GGTTPTMTPGTPSTTNPGM-TPTVFGNGISPSGS-GSGF-NDGSGSVGFN 168
             TT T T GTP+T  P   TPT    G   SG+  SGF N G+ + G N
Sbjct: 121 TPTTGTPTSGTPTTGTPTTGTPT---TGTPTSGTPTSGFPNTGTPNTGTN 162

[Close]

BLAST of Clc05G26020 vs. ExPASy Swiss-Prot
Match: Q9FNQ2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 9.8e-26
Identity = 76/169 (44.97%), Postives = 100/169 (59.17%), Query Frame = 0


Query: 1   MAVFVFLVFVLALTGRSYANYCLCRDGATQQALQKALDYACGAGADCSPILSSGACFQPN 60
           MA  V  + +L+L G S A++C+C+ G +   LQ  LDYACG GADC+P     +CF P+
Sbjct: 1   MAALVLSLLLLSLAGHSSASWCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNPD 60

Query: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPS--GCVYPSSPSNAGTSPT 120
            V+ HCNYAVNS+FQ+KGQ  GSC+F+G ATP    T S PS  GC +P+S S +  S T
Sbjct: 61  NVRSHCNYAVNSFFQKKGQSPGSCNFDGTATP----TNSDPSYTGCAFPTSASGSSGSTT 120

Query: 121 NSGGTT-----PTMT----PGTPSTTNPGMTPTVFGNGISPSGSGSGFN 159
            + GTT     PT T     GT S  +   T  VFG   +   +G+G N
Sbjct: 121 VTPGTTNPKGSPTTTTLPGSGTNSPYSGNPTNGVFGGNSTGGTTGTGIN 165

[Close]

BLAST of Clc05G26020 vs. ExPASy Swiss-Prot
Match: Q9SD84 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 4.1e-24
Identity = 72/170 (42.35%), Postives = 98/170 (57.65%), Query Frame = 0


Query: 1   MAVFVFLVFVLALTGRSYANYCLCRDGATQQALQKALDYACGAGADCSPILSSGACFQPN 60
           MA  V  +  L + G + A++C+C+ G +   LQK LDYACG GADC+P    G+CF P+
Sbjct: 1   MAPLVLYLLTLLMAGHTSASWCVCKTGLSDSVLQKTLDYACGNGADCNPTHPKGSCFNPD 60

Query: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTNS 120
            V+ HCNYAVNS+FQ+KGQ   SC+F G AT  +T T    +GC +PSS S +    + S
Sbjct: 61  NVRAHCNYAVNSFFQKKGQASESCNFTGTAT--LTTTDPSYTGCAFPSSASGS----SGS 120

Query: 121 GGTTPTMTPGTPSTTNPGMTPTVFGNGISP-SGS------GSGFNDGSGS 164
           G TT T    +P  +N   + T F  G SP SG+      G    D +G+
Sbjct: 121 GSTTVTPGKNSPKGSN---SITTFPGGNSPYSGTPSTGLLGGNITDATGT 161

[Close]

BLAST of Clc05G26020 vs. ExPASy Swiss-Prot
Match: Q9FZD0 (Carbohydrate-binding X8 domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=At1g26450 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.6e-20
Identity = 65/161 (40.37%), Postives = 93/161 (57.76%), Query Frame = 0


Query: 1   MAVFVFLVFVLALTGRSYANYCLCRDGATQQALQKALDYACGAGADCSPILSSGACFQPN 60
           MAV + L  +  +   S A  C+C+D A +  LQK +D+ACG GADC+ I ++GAC+QPN
Sbjct: 1   MAVLLPLFLLSFMFTYSNAAVCVCKD-ANELDLQKVIDFACGGGADCAQIQTTGACYQPN 60

Query: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTNS 120
           T+K+HC+ AVNSY+Q+K     +CDFNGAA  S T   S  S C+  SS +   T+   S
Sbjct: 61  TLKNHCDVAVNSYYQKKASTGATCDFNGAAVIS-TSPPSTTSSCLSSSSSNGTPTAGYPS 120

Query: 121 GGTTPTMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGS 162
            G + T +PGT + +    T +       P+ S   F D +
Sbjct: 121 TGNSTTASPGTTNPSTGNSTNSTLPTNDKPTSSTITFPDST 159

[Close]

BLAST of Clc05G26020 vs. ExPASy TrEMBL
Match: A0A0A0KQT6 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G606660 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 3.3e-93
Identity = 178/189 (94.18%), Postives = 179/189 (94.71%), Query Frame = 0


Query: 1   MAVFVFLVFVLALTGRSYANYCLCRDGATQQALQKALDYACGAGADCSPILSSGACFQPN 60
           MAVFVF VF LALTGRSYANYCLCRDG  Q ALQKALDYACGAGADCS ILSSGACFQPN
Sbjct: 1   MAVFVFFVFFLALTGRSYANYCLCRDGVGQSALQKALDYACGAGADCSSILSSGACFQPN 60

Query: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTNS 120
           TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTAS PSGCVYPSSPSNAGTSPTN 
Sbjct: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASAPSGCVYPSSPSNAGTSPTNG 120

Query: 121 GGTTPTMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGSGSVGFNEKRNLLLAVGLTL 180
           GGTTPTMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGSG VGFNE RNLLLAVGL+L
Sbjct: 121 GGTTPTMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGSGGVGFNENRNLLLAVGLSL 180

Query: 181 WLSVLFLWG 190
           WLSVLFLWG
Sbjct: 181 WLSVLFLWG 189

[Close]

BLAST of Clc05G26020 vs. ExPASy TrEMBL
Match: A0A5A7SU26 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00090 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.2e-88
Identity = 173/195 (88.72%), Postives = 177/195 (90.77%), Query Frame = 0


Query: 1   MAVFVFLVFVLALTGRSYANYCLCRDGATQQALQKALDYACGAGADCSPILSSGACFQPN 60
           MAVFVF VF LALTGRS ANYCLCRDG  Q  LQKALDYACG GADC+ ILS+GACFQPN
Sbjct: 1   MAVFVFFVFFLALTGRSCANYCLCRDGVGQSVLQKALDYACGNGADCAAILSNGACFQPN 60

Query: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTN- 120
           TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTN 
Sbjct: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTNG 120

Query: 121 -----SGGTTPTMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGSGSVGFNEKRNLLL 180
                +GGTTPTMTPGTPSTT PGMTPTVFGNGISPSGSG+GFNDGSG VGFNE RNLLL
Sbjct: 121 GTTPTNGGTTPTMTPGTPSTTTPGMTPTVFGNGISPSGSGTGFNDGSGCVGFNENRNLLL 180

Query: 181 AVGLTLWLSVLFLWG 190
           AVGLTLWLSVLFLWG
Sbjct: 181 AVGLTLWLSVLFLWG 195

[Close]

BLAST of Clc05G26020 vs. ExPASy TrEMBL
Match: A0A1S3BF20 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucumis melo OX=3656 GN=LOC103489181 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.2e-88
Identity = 173/195 (88.72%), Postives = 177/195 (90.77%), Query Frame = 0


Query: 1   MAVFVFLVFVLALTGRSYANYCLCRDGATQQALQKALDYACGAGADCSPILSSGACFQPN 60
           MAVFVF VF LALTGRS ANYCLCRDG  Q  LQKALDYACG GADC+ ILS+GACFQPN
Sbjct: 1   MAVFVFFVFFLALTGRSCANYCLCRDGVGQSVLQKALDYACGNGADCAAILSNGACFQPN 60

Query: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTN- 120
           TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTN 
Sbjct: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTNG 120

Query: 121 -----SGGTTPTMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGSGSVGFNEKRNLLL 180
                +GGTTPTMTPGTPSTT PGMTPTVFGNGISPSGSG+GFNDGSG VGFNE RNLLL
Sbjct: 121 GTTPTNGGTTPTMTPGTPSTTTPGMTPTVFGNGISPSGSGTGFNDGSGCVGFNENRNLLL 180

Query: 181 AVGLTLWLSVLFLWG 190
           AVGLTLWLSVLFLWG
Sbjct: 181 AVGLTLWLSVLFLWG 195

[Close]

BLAST of Clc05G26020 vs. ExPASy TrEMBL
Match: A0A6J1G024 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucurbita moschata OX=3662 GN=LOC111449448 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.7e-84
Identity = 165/185 (89.19%), Postives = 172/185 (92.97%), Query Frame = 0


Query: 1   MAVFVFLVFVLALTGRSYANYCLCRDGATQQALQKALDYACGAGADCSPILSSGACFQPN 60
           MAVFVFLVF LALTG+SYANYCLCRDG +QQ LQKALDYACGAGADCSPILSSGACFQPN
Sbjct: 1   MAVFVFLVFFLALTGQSYANYCLCRDGVSQQVLQKALDYACGAGADCSPILSSGACFQPN 60

Query: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTNS 120
           TVKDHC+YAVNSYFQRKGQVQGSCDF+GAATPSV+LTASVPSGCVYPSSPSNAGTSPTNS
Sbjct: 61  TVKDHCSYAVNSYFQRKGQVQGSCDFSGAATPSVSLTASVPSGCVYPSSPSNAGTSPTNS 120

Query: 121 GGTTPTMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGSGSVGFNEKRNLLLAVGLTL 180
           GGT       TP TTNPGMTPTVFGNGISPSGSG+GFNDGSG VGFNEK NLLL+VGLTL
Sbjct: 121 GGT-------TPGTTNPGMTPTVFGNGISPSGSGAGFNDGSGGVGFNEKMNLLLSVGLTL 178

Query: 181 WLSVL 186
           WLSVL
Sbjct: 181 WLSVL 178

[Close]

BLAST of Clc05G26020 vs. ExPASy TrEMBL
Match: A0A6J1GWB4 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LOC111458119 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 5.3e-83
Identity = 162/198 (81.82%), Postives = 177/198 (89.39%), Query Frame = 0


Query: 1   MAVFVFLVFVLALTGRSYANYCLCRDGATQQALQKALDYACGAGADCSPILSSGACFQPN 60
           MAVF FLVF LA+TGRSYANYCLCRDG +QQ LQKA+DYACGAGADCSPIL++GACFQPN
Sbjct: 1   MAVFAFLVFFLAITGRSYANYCLCRDGVSQQVLQKAIDYACGAGADCSPILTNGACFQPN 60

Query: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTNS 120
           TVKDHCNYAVNSYFQRKGQVQGSCDF GAATPSVTLTA+VPSGCVYPSSPSNAGT+PT+ 
Sbjct: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFGGAATPSVTLTATVPSGCVYPSSPSNAGTTPTSP 120

Query: 121 GGTTPTMT---------PGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGSGSVGFNEKRN 180
            GTTPTMT         PGTPS+T+PGMTP+VF NGISPSGSG GFNDGSGSVGF++ RN
Sbjct: 121 SGTTPTMTPPGMPTMTPPGTPSSTSPGMTPSVFNNGISPSGSG-GFNDGSGSVGFSDNRN 180

Query: 181 LLLAVGLTLWLSVLFLWG 190
           L LAVG TLWL+V+FLWG
Sbjct: 181 LFLAVGSTLWLAVVFLWG 197

[Close]

BLAST of Clc05G26020 vs. TAIR 10
Match: AT2G03505.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 145.2 bits (365), Expect = 5.3e-35
Identity = 86/185 (46.49%), Postives = 117/185 (63.24%), Query Frame = 0


Query: 1   MAVFVFLVFVLALTGRSYANYCLCRDGATQQALQKALDYACGAGADCSPILSSGACFQPN 60
           M + + L+F+LALT  S A YCLCRDG  ++ LQ ++DYACG   DC+PI   G C+QPN
Sbjct: 1   MRLLLSLLFLLALTTYSSATYCLCRDGVGEKDLQTSIDYACGVLKDCNPIHEKGPCYQPN 60

Query: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTNS 120
           T+K HC++AVN+YFQR GQ+ GSC+F+G AT S  L ++V +GC+YPSSP +AGT+PT  
Sbjct: 61  TIKSHCDWAVNTYFQRFGQISGSCNFSGTATTSQNLPSTVVTGCLYPSSPGSAGTTPTT- 120

Query: 121 GGTTPTMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGSGSVGFNEKRNLLLAVGLTL 180
                    GTPS T     P  FG    P+G      D SG+   N   +L +++ L+L
Sbjct: 121 ---------GTPSGTQTFPGPPAFG----PAGD----FDPSGN---NGAPSLFISIALSL 164

Query: 181 WLSVL 186
             SV+
Sbjct: 181 GFSVV 164

[Close]

BLAST of Clc05G26020 vs. TAIR 10
Match: AT1G13830.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 137.1 bits (344), Expect = 1.4e-32
Identity = 91/201 (45.27%), Postives = 118/201 (58.71%), Query Frame = 0


Query: 1   MAVFVFLVFVLALTGRSYANYCLCRDGATQQALQKALDYACGAGADCSPILSSGACFQPN 60
           M V + L+ +L+LT  S A YCLC+DG     LQ ++DYACG  ADC+PI   G C+QP+
Sbjct: 1   MKVLLGLLLLLSLTNSSSAIYCLCKDGIGDTELQTSIDYACGTLADCNPIHDKGTCYQPD 60

Query: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSN-------- 120
           T+K HC++AVNSYFQ   QV GSC+F+G AT +    +++ +GC+YPSSPS+        
Sbjct: 61  TIKSHCDWAVNSYFQNAAQVPGSCNFSGTATTNPNPPSNLANGCIYPSSPSSTRSPPSTT 120

Query: 121 --AGTSPTNSGGTTPTMTPGT--PSTTNPGMTPTVFGNGISPSGSGSGFNDGSGSVGFNE 180
              GT+PTN  GTTP   PGT  P T  PG TP VFG    P+G  +  N GSG+     
Sbjct: 121 PPTGTTPTN--GTTP--FPGTPFPGTPFPG-TPPVFG----PTGVFNPSNPGSGASSLGT 180

Query: 181 KRNLLLAVGLTLWLSVLFLWG 190
                L   L     + FLWG
Sbjct: 181 SSVFTLCFSL-----LAFLWG 187

[Close]

BLAST of Clc05G26020 vs. TAIR 10
Match: AT1G18650.1 (plasmodesmata callose-binding protein 3 )

HSP 1 Score: 130.6 bits (327), Expect = 1.4e-30
Identity = 81/164 (49.39%), Postives = 104/164 (63.41%), Query Frame = 0


Query: 1   MAVFVFLVFVLALTGRSYANYCLCRDGATQQALQKALDYACGAGADCSPILSSGACFQPN 60
           MAVFV ++ +LA+ G S   +C+C++G ++  LQK LDYACGAGADC PI  +G CF PN
Sbjct: 1   MAVFVLVMILLAMAGHSSGTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNPN 60

Query: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPS--GCVYPSSPSNAGTSPT 120
           TVK HC+YAVNS+FQ+KGQ  G+CDF G A    T +AS PS   C +P+S S +GT  T
Sbjct: 61  TVKSHCSYAVNSFFQKKGQSLGTCDFAGTA----TFSASDPSYTTCPFPASASGSGT--T 120

Query: 121 NSGGTTP-TMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGS 162
               TTP T  P T +T    +TP+  G    PSG    + D S
Sbjct: 121 TPVTTTPSTRVPTTTNTRPYTITPSTGGGLGIPSGINPDYTDPS 158

[Close]

BLAST of Clc05G26020 vs. TAIR 10
Match: AT1G69295.1 (plasmodesmata callose-binding protein 4 )

HSP 1 Score: 120.6 bits (301), Expect = 1.4e-27
Identity = 83/170 (48.82%), Postives = 108/170 (63.53%), Query Frame = 0


Query: 1   MAVFVFLVFVLALTGRSYANYCLCRDGATQQALQKALDYACGAGADCSPILSSGACFQPN 60
           M+V + L  ++++   S A YCLC++G  +Q LQKA+DYACG GADC+ I  +GAC+QPN
Sbjct: 1   MSVLLPLCLIISMFTYSNAAYCLCKEG-NEQVLQKAIDYACGNGADCTQIQPTGACYQPN 60

Query: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTNS 120
           TVK+HC+ AVNSY+Q+K     +CDFNGAA+PS T   S  S C+  SS S    +PT  
Sbjct: 61  TVKNHCDVAVNSYYQKKASSGATCDFNGAASPSTT-PPSTASNCLTGSSSSG---TPTTG 120

Query: 121 GGTTPTMTPGTPSTTNPGM-TPTVFGNGISPSGS-GSGF-NDGSGSVGFN 168
             TT T T GTP+T  P   TPT    G   SG+  SGF N G+ + G N
Sbjct: 121 TPTTGTPTSGTPTTGTPTTGTPT---TGTPTSGTPTSGFPNTGTPNTGTN 162

[Close]

BLAST of Clc05G26020 vs. TAIR 10
Match: AT5G61130.1 (plasmodesmata callose-binding protein 1 )

HSP 1 Score: 118.2 bits (295), Expect = 7.0e-27
Identity = 76/169 (44.97%), Postives = 100/169 (59.17%), Query Frame = 0


Query: 1   MAVFVFLVFVLALTGRSYANYCLCRDGATQQALQKALDYACGAGADCSPILSSGACFQPN 60
           MA  V  + +L+L G S A++C+C+ G +   LQ  LDYACG GADC+P     +CF P+
Sbjct: 1   MAALVLSLLLLSLAGHSSASWCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNPD 60

Query: 61  TVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPS--GCVYPSSPSNAGTSPT 120
            V+ HCNYAVNS+FQ+KGQ  GSC+F+G ATP    T S PS  GC +P+S S +  S T
Sbjct: 61  NVRSHCNYAVNSFFQKKGQSPGSCNFDGTATP----TNSDPSYTGCAFPTSASGSSGSTT 120

Query: 121 NSGGTT-----PTMT----PGTPSTTNPGMTPTVFGNGISPSGSGSGFN 159
            + GTT     PT T     GT S  +   T  VFG   +   +G+G N
Sbjct: 121 VTPGTTNPKGSPTTTTLPGSGTNSPYSGNPTNGVFGGNSTGGTTGTGIN 165

The following BLAST results are available for this feature:

BLAST of Clc05G26020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892199.1	2.8e-94	95.77	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Benincasa hispida]	[more]
XP_004135148.1	6.9e-93	94.18	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus]	[more]
XP_008446432.1	6.6e-88	88.72	PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis melo] >KAA0034470.1 ...	[more]
XP_022945109.1	7.6e-84	89.19	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucurbita moschata]	[more]
KAG7013104.1	1.7e-83	88.65	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucurbita argyrosperma subsp. argyrospe...	[more]

BLAST of Clc05G26020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ86	1.9e-29	49.39	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3...	[more]
Q93V72	2.0e-26	48.82	PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4...	[more]
Q9FNQ2	9.8e-26	44.97	PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1...	[more]
Q9SD84	4.1e-24	42.35	PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2...	[more]
Q9FZD0	3.6e-20	40.37	Carbohydrate-binding X8 domain-containing protein OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Clc05G26020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQT6	3.3e-93	94.18	X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G606660 PE=4 SV=...	[more]
A0A5A7SU26	3.2e-88	88.72	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BF20	3.2e-88	88.72	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucumis melo OX=3656 GN=LOC103489181 ...	[more]
A0A6J1G024	3.7e-84	89.19	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1GWB4	5.3e-83	81.82	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Clc05G26020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03505.1	5.3e-35	46.49	Carbohydrate-binding X8 domain superfamily protein	[more]
AT1G13830.1	1.4e-32	45.27	Carbohydrate-binding X8 domain superfamily protein	[more]
AT1G18650.1	1.4e-30	49.39	plasmodesmata callose-binding protein 3	[more]
AT1G69295.1	1.4e-27	48.82	plasmodesmata callose-binding protein 4	[more]
AT5G61130.1	7.0e-27	44.97	plasmodesmata callose-binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 20..106 e-value: 1.3E-33 score: 127.7
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 21..91 e-value: 1.8E-19 score: 70.2
None	No IPR available	GENE3D	1.20.58.1040		coord: 17..108 e-value: 2.9E-9 score: 39.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..156
None	No IPR available	PANTHER	PTHR31044:SF88	CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN	coord: 1..176
IPR044788	Carbohydrate-binding X8 domain-containing protein, plant	PANTHER	PTHR31044	BETA-1,3 GLUCANASE	coord: 1..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G26020.1	Clc05G26020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009506	plasmodesma