![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Clc05G25900 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCTATGTGGGGATCATAAAGATAGAGAGGTGAGGATCCATGAAAGTTTGGAGGAGCTAAGTACTGATTTAGCTGACTATATTGCTGAATTATCAGAGGCATCTGTGAAAGAACGTGGGGTATTTTCTATTGCGTTATCTGGTGGTTCTCTGATTAGTTTAATGGGGTATGGATGATTTTGTTTCCTTCTCTGGTTTCAATGAGGCTCTGTAAATTTGGTTTCTGCCTATAATTTTTGGTCGATGGATAACAGAAAGCTCTGTGAAGCTCCTTACAACAAGACTGTCGACTGGGCCAAGTGGTATATATTTTGGGCTGATGAACGTGTTGTTGCAAAAAGCCATGCGGACAGCAATTATAAGCTTGCAAAGGATAACCTTCTTTCCAAGGTTTGTACTAATGTTTCTCTTTTGCTTGTAATTGATCGTTGCCTTCTCTTTTGGACCTTTTTTTGTGGTGGTGGTGGTTGGGGTGGGTGGTGGGGATGGTGAGATTTGCAAATGCACTTGATAATCTGAAACCTTAGAGGAACTAAAACTACAGAGCAATTATTCCTTTGCTTCTTTTCCATGAATACAATGTTTGCTAAATTCTGGTTCTCTTCATGGATTCTAACAAAGGAAGTAGTTGTATGTACAATGCTTAGTGTATTTTAATCCTTGGGCTATTAGTTGACACTTTAATGACCAAACCAAGGAACTAAGTTGGTCTTTGAAGTTCCATGCATCATATAAATGAATGATGAATTGATAGATCTGCTCTGTATTGTTCTGAAATCATCCTTATAAAATATAGAATATTTTCAGTCAACTGAACATAGAGCTGCTTCCTTTCTCGACTTTAGGGACTAATTTGGTTCCATTGTATATATATTCTTCATGTTCTTCATTTAAACAACATTTGGGGTGAGGATTTGAAGTTCTAACCTTTTGGCATATAATGCCTTAATTAATTGAAATACACAACATTTGGGGTAAGGATTTGGACTTCTAAGCTTTTGGTATATAATGCCTTAACTAGTTGAAATGCACTCAGTTTGACCACTTGTTTTCCCTAGGGAAGATAGTTGCAATTTCATTATATATCACCAAACTTGATGGATTTTTTGGTCTTCAGCTCAAAATTGCACTATTCTTGAACTAACATAGGGAGGAAATGACATTGGAAATCCATCCTTGTACCATGTCCTACCCTTTGAAAGCAAAAATGATTTCATGAACTCTAATCTAATAAAGATCAAGCATCCAAGAGATCACATTTTTGTTGTTTTTGGTTGCTATACATGATTGCAATCATATCCTGTAGGGAACTTTCTTTGGGACCGGAATGCCAAGCATCTCACCATATCAGTTTTTCCATGATTTCGTTCTTCATAATCCATCTTCTCATGTCATATACTTTGAACATTTGTTAGTTTTAACCAAAACTGACTTAGTCAGCAAATATTAATACAATTCTCTTCCAAAGTGGAAAAATTGTGTGTGATGTCAACCATTCTCATATCTTTCTTTTACTTAGCAATTGCACTCTACTCCAGGACATGCTATTTTGAACTTTGATCCTCACGATTTAAATGATTCTAGCTATTGATGATCTGTTCTGTTTGTATCACTAGGTGCCAATTGTTCCCAGCCATGTACACTCGATCAATGATTCGGTGTCAGCTGAGGAAGCTGCTGATGAGTACAAGTTCGTCCTTCGACAGTTAGTTAAATCCCGCATCGTAAGTGTGTCTGATGTGAGTGACAGTCCCAAGTTTGACCTCATACTACTTGGAATGGGTTCTGATGGCCATGTCGCCTCATTATTCCCCAACCACTCTGTGGTCGAGGAGAAAGATGAATGGGTTGCCTTCATAACCGATTCTCCGAAACCTCCTCCAGAGAGAATCACCTTCACATTGCCTGTGATCAACTCTGCATCAAATGTGGCGATTGTTGTGACAGGCAAAAACAAAGCAGAGGCTGTACATTTGGCCATCGATGATGGAGGAGCAGACTGCCCACTCCTACCTGCGAGGTTGGTACAGCCAAGGAAAGGAAAGTTGGCATGGTTTTTAGATAACCATGCTGCTTCAAAACTTGACAATTACCAATTTTCCGAGTAGCTTTAAGCTGTTCCCGACGCAGTGTATCTCTGTATGTAGTTGATGGATTTCAGCAGTTGTGGATCCTTGTCTCTTCATTACGATCCCACATTTTATTTCACCCCCCCTTTCCTTTTTGTTTTGGGTCACATTCTCCATATTTTGACTTCTCTTCATTTCTTCTCTGGAGTGATTAGAAGTGTGAATCTCCTTTCATTTTGTAAGCAGAGCTAAATAAGCTAAGATCTCAGTGAAAAACAGATGGTTTTGTAGGACAGTTGCTGCTATCGCTCTGTATATGTTGAAGCCAGCAGATTTGTAAAATGCAGCCATCAGAAATTTATTGAATTTCTCTATTTTCTTTCTCTCCTCTCATTCATTTTGGTAGAGGGAAAAACTATAAAGTTGTAAGAAATATTGGGAAAAGTTTGGTAATCCAATCATGGGTTATGACATCAGATTAAGAAATTGAATACAAATCTTAATTAATTTCTGTGTTCAGTAAAATTGGCCATTTGAAAATGTAGTCTAACATCTTCCATCGCTTTCCAGATGGTGACTGTTTTGAAGAGTGGATTCTATATTCTAAGAAATAGAGATCACATTACTGGAATACCGATTTCAAAAGTTCCAATTCAATCTTTTTTGTTCTCTCAATAGAAAAAAATGTCAAATATTTTTAAAGTCAAGTGGATAAGATTAGGTGACGCATTGGCCCATAGTGATAAGACCTCTCGTAGTTAATTAATTAATTGTTGAGGCTGGTTTCTTGGATCTTACAGAAGGAAGCAATGATGAGCTTCACAATTTTTTATTTTTATTTTTTAATTTTTTTGGTTTTTTGGTTTTTTTATTTGCCATATATATTGGGATCCCCTGGGATAGGAGGACCCACCCTCAATGGGGAATAGGAATCACCACTCCAAACAAGATAAAATTATGATTTAAATTTATCCACATGCCAAGGAAAGTTCACATATTGTATTGTAAAAAGTTTCCTAAAAAATATAAAATAAACAACAAAATATCGTCAATGATTAAATACAACCTAGCACACCCAATTTTATTTTAACAAATGGCCACACTAAATTTTTTAATTGGACAACAGCCATAATAACTCTTATTTATTATTTGATACGTCATTAAATAATTTATTTTATGGACCTGGCATAATTTTAAATGCTACTTTAGTGGTATGCAAAATTTTTCATACTACATAGTACTAGAAATTTTCTCCAAAGCTAGATGCAACCAAAGTAACACCCAAATTCTTCCTAAGATAAAAACATACCTTTTAACTGTTTTATTTATTAACTTAAATATTATTTTTAAAAGTTTCTATTTTATTTTATTTTTTTAGAAATATCCATCCTCATCAATAATTGAAACTGGCATCTTCATTGATGTCACTATTAGAGCATTCCCCACTCTCCAGTCCTCATTTTCTACAAATTTCTATAAGCACAGAAACAAAATGAAGAATAGAATCTAATCGTCAAGCTTGTCATTCTTACCTTTGAAGTTTTTAATCAGTTACTTATGATTGATTAAAAACTCAATATATTGGTTCCCCGATTGTGGAGAAGAGGATTACTCTGGGGGCAAGCACATACTTTTATTTAAGGCTTGTACTTTAGTGTACCATTATTTTCTGAAACAGTTGCTTGTCTTTTCTTTTAGCTTCTTCATTGATTGCCCCCTTTTTTTTCTTTTTTTTTTTTTTTTTTTGTAAACAATAGGCTTGAGGCATTTGCTTGGCCTTGGAAATGGAAACCCAAATCCAGTTTCCGATTACATTTGCCTCGTGAGAGAAGATTCCCTTCAATGTTTCATCATTTCATTAATATGAAAATTGCATCGCATTCAACGAGTTGTAGGCCTCTGCTCCATCATTTCATCGCGCAGAAGATGTCGCCATTTGAGTTGTCGATGACGTTCCCTTACGATGTCTGA ATGGCTCTATGTGGGGATCATAAAGATAGAGAGGTGAGGATCCATGAAAGTTTGGAGGAGCTAAGTACTGATTTAGCTGACTATATTGCTGAATTATCAGAGGCATCTGTGAAAGAACGTGGGGTATTTTCTATTGCGTTATCTGGTGGTTCTCTGATTAGTTTAATGGGAAAGCTCTGTGAAGCTCCTTACAACAAGACTGTCGACTGGGCCAAGTGGTATATATTTTGGGCTGATGAACGTGTTGTTGCAAAAAGCCATGCGGACAGCAATTATAAGCTTGCAAAGGATAACCTTCTTTCCAAGGTGCCAATTGTTCCCAGCCATGTACACTCGATCAATGATTCGGTGTCAGCTGAGGAAGCTGCTGATGAGTACAAGTTCGTCCTTCGACAGTTAGTTAAATCCCGCATCGTAAGTGTGTCTGATGTGAGTGACAGTCCCAAGTTTGACCTCATACTACTTGGAATGGGTTCTGATGGCCATGTCGCCTCATTATTCCCCAACCACTCTGTGGTCGAGGAGAAAGATGAATGGGTTGCCTTCATAACCGATTCTCCGAAACCTCCTCCAGAGAGAATCACCTTCACATTGCCTGTGATCAACTCTGCATCAAATGTGGCGATTGTTGTGACAGGCAAAAACAAAGCAGAGGCTGTACATTTGGCCATCGATGATGGAGGAGCAGACTGCCCACTCCTACCTGCGAGGCTTGAGGCATTTGCTTGGCCTTGGAAATGGAAACCCAAATCCAGTTTCCGATTACATTTGCCTCGTGAGAGAAGATTCCCTTCAATGTTTCATCATTTCATTAATATGAAAATTGCATCGCATTCAACGAGTTGTAGGCCTCTGCTCCATCATTTCATCGCGCAGAAGATGTCGCCATTTGAGTTGTCGATGACGTTCCCTTACGATGTCTGA ATGGCTCTATGTGGGGATCATAAAGATAGAGAGGTGAGGATCCATGAAAGTTTGGAGGAGCTAAGTACTGATTTAGCTGACTATATTGCTGAATTATCAGAGGCATCTGTGAAAGAACGTGGGGTATTTTCTATTGCGTTATCTGGTGGTTCTCTGATTAGTTTAATGGGAAAGCTCTGTGAAGCTCCTTACAACAAGACTGTCGACTGGGCCAAGTGGTATATATTTTGGGCTGATGAACGTGTTGTTGCAAAAAGCCATGCGGACAGCAATTATAAGCTTGCAAAGGATAACCTTCTTTCCAAGGTGCCAATTGTTCCCAGCCATGTACACTCGATCAATGATTCGGTGTCAGCTGAGGAAGCTGCTGATGAGTACAAGTTCGTCCTTCGACAGTTAGTTAAATCCCGCATCGTAAGTGTGTCTGATGTGAGTGACAGTCCCAAGTTTGACCTCATACTACTTGGAATGGGTTCTGATGGCCATGTCGCCTCATTATTCCCCAACCACTCTGTGGTCGAGGAGAAAGATGAATGGGTTGCCTTCATAACCGATTCTCCGAAACCTCCTCCAGAGAGAATCACCTTCACATTGCCTGTGATCAACTCTGCATCAAATGTGGCGATTGTTGTGACAGGCAAAAACAAAGCAGAGGCTGTACATTTGGCCATCGATGATGGAGGAGCAGACTGCCCACTCCTACCTGCGAGGCTTGAGGCATTTGCTTGGCCTTGGAAATGGAAACCCAAATCCAGTTTCCGATTACATTTGCCTCGTGAGAGAAGATTCCCTTCAATGTTTCATCATTTCATTAATATGAAAATTGCATCGCATTCAACGAGTTGTAGGCCTCTGCTCCATCATTTCATCGCGCAGAAGATGTCGCCATTTGAGTTGTCGATGACGTTCCCTTACGATGTCTGA MALCGDHKDREVRIHESLEELSTDLADYIAELSEASVKERGVFSIALSGGSLISLMGKLCEAPYNKTVDWAKWYIFWADERVVAKSHADSNYKLAKDNLLSKVPIVPSHVHSINDSVSAEEAADEYKFVLRQLVKSRIVSVSDVSDSPKFDLILLGMGSDGHVASLFPNHSVVEEKDEWVAFITDSPKPPPERITFTLPVINSASNVAIVVTGKNKAEAVHLAIDDGGADCPLLPARLEAFAWPWKWKPKSSFRLHLPRERRFPSMFHHFINMKIASHSTSCRPLLHHFIAQKMSPFELSMTFPYDV Homology
BLAST of Clc05G25900 vs. NCBI nr
Match: XP_038893109.1 (probable 6-phosphogluconolactonase 1 [Benincasa hispida] >XP_038893110.1 probable 6-phosphogluconolactonase 1 [Benincasa hispida] >XP_038893112.1 probable 6-phosphogluconolactonase 1 [Benincasa hispida] >XP_038893113.1 probable 6-phosphogluconolactonase 1 [Benincasa hispida]) HSP 1 Score: 462.2 bits (1188), Expect = 3.4e-126 Identity = 230/238 (96.64%), Postives = 235/238 (98.74%), Query Frame = 0
BLAST of Clc05G25900 vs. NCBI nr
Match: XP_008446456.1 (PREDICTED: probable 6-phosphogluconolactonase 1 [Cucumis melo] >XP_008446458.1 PREDICTED: probable 6-phosphogluconolactonase 1 [Cucumis melo] >XP_008446459.1 PREDICTED: probable 6-phosphogluconolactonase 1 [Cucumis melo] >XP_008446460.1 PREDICTED: probable 6-phosphogluconolactonase 1 [Cucumis melo] >XP_008446461.1 PREDICTED: probable 6-phosphogluconolactonase 1 [Cucumis melo] >XP_016900296.1 PREDICTED: probable 6-phosphogluconolactonase 1 [Cucumis melo] >XP_016900297.1 PREDICTED: probable 6-phosphogluconolactonase 1 [Cucumis melo] >KAA0034478.1 putative 6-phosphogluconolactonase 1 [Cucumis melo var. makuwa] >TYK09032.1 putative 6-phosphogluconolactonase 1 [Cucumis melo var. makuwa]) HSP 1 Score: 459.9 bits (1182), Expect = 1.7e-125 Identity = 230/238 (96.64%), Postives = 234/238 (98.32%), Query Frame = 0
BLAST of Clc05G25900 vs. NCBI nr
Match: XP_004135142.1 (probable 6-phosphogluconolactonase 1 [Cucumis sativus] >XP_011655717.1 probable 6-phosphogluconolactonase 1 [Cucumis sativus] >XP_031741392.1 probable 6-phosphogluconolactonase 1 [Cucumis sativus] >XP_031741393.1 probable 6-phosphogluconolactonase 1 [Cucumis sativus] >KGN51987.1 hypothetical protein Csa_008047 [Cucumis sativus]) HSP 1 Score: 456.4 bits (1173), Expect = 1.9e-124 Identity = 227/238 (95.38%), Postives = 234/238 (98.32%), Query Frame = 0
BLAST of Clc05G25900 vs. NCBI nr
Match: XP_023531045.1 (probable 6-phosphogluconolactonase 1 [Cucurbita pepo subsp. pepo] >XP_023531052.1 probable 6-phosphogluconolactonase 1 [Cucurbita pepo subsp. pepo] >XP_023531059.1 probable 6-phosphogluconolactonase 1 [Cucurbita pepo subsp. pepo] >XP_023531073.1 probable 6-phosphogluconolactonase 1 [Cucurbita pepo subsp. pepo] >XP_023531080.1 probable 6-phosphogluconolactonase 1 [Cucurbita pepo subsp. pepo] >XP_023531089.1 probable 6-phosphogluconolactonase 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 449.9 bits (1156), Expect = 1.8e-122 Identity = 224/238 (94.12%), Postives = 231/238 (97.06%), Query Frame = 0
BLAST of Clc05G25900 vs. NCBI nr
Match: XP_022956958.1 (probable 6-phosphogluconolactonase 1 [Cucurbita moschata] >XP_022956959.1 probable 6-phosphogluconolactonase 1 [Cucurbita moschata] >XP_022956960.1 probable 6-phosphogluconolactonase 1 [Cucurbita moschata]) HSP 1 Score: 448.7 bits (1153), Expect = 3.9e-122 Identity = 224/238 (94.12%), Postives = 231/238 (97.06%), Query Frame = 0
BLAST of Clc05G25900 vs. ExPASy Swiss-Prot
Match: Q9LMX8 (Probable 6-phosphogluconolactonase 1 OS=Arabidopsis thaliana OX=3702 GN=PGL1 PE=2 SV=1) HSP 1 Score: 351.7 bits (901), Expect = 8.6e-96 Identity = 177/245 (72.24%), Postives = 202/245 (82.45%), Query Frame = 0
BLAST of Clc05G25900 vs. ExPASy Swiss-Prot
Match: A2YNH4 (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_025867 PE=3 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 1.8e-90 Identity = 159/239 (66.53%), Postives = 199/239 (83.26%), Query Frame = 0
BLAST of Clc05G25900 vs. ExPASy Swiss-Prot
Match: Q6Z4H0 (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0604000 PE=2 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 1.8e-90 Identity = 159/239 (66.53%), Postives = 199/239 (83.26%), Query Frame = 0
BLAST of Clc05G25900 vs. ExPASy Swiss-Prot
Match: A2XI04 (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_011697 PE=3 SV=2) HSP 1 Score: 330.5 bits (846), Expect = 2.0e-89 Identity = 157/233 (67.38%), Postives = 196/233 (84.12%), Query Frame = 0
BLAST of Clc05G25900 vs. ExPASy Swiss-Prot
Match: Q75IV7 (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0416500 PE=2 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 2.0e-89 Identity = 157/233 (67.38%), Postives = 196/233 (84.12%), Query Frame = 0
BLAST of Clc05G25900 vs. ExPASy TrEMBL
Match: A0A1S4DWC6 (Probable 6-phosphogluconolactonase OS=Cucumis melo OX=3656 GN=LOC103489191 PE=3 SV=1) HSP 1 Score: 459.9 bits (1182), Expect = 8.2e-126 Identity = 230/238 (96.64%), Postives = 234/238 (98.32%), Query Frame = 0
BLAST of Clc05G25900 vs. ExPASy TrEMBL
Match: A0A5D3CCK1 (Probable 6-phosphogluconolactonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00180 PE=3 SV=1) HSP 1 Score: 459.9 bits (1182), Expect = 8.2e-126 Identity = 230/238 (96.64%), Postives = 234/238 (98.32%), Query Frame = 0
BLAST of Clc05G25900 vs. ExPASy TrEMBL
Match: A0A0A0KU96 (Probable 6-phosphogluconolactonase OS=Cucumis sativus OX=3659 GN=Csa_5G606770 PE=3 SV=1) HSP 1 Score: 456.4 bits (1173), Expect = 9.1e-125 Identity = 227/238 (95.38%), Postives = 234/238 (98.32%), Query Frame = 0
BLAST of Clc05G25900 vs. ExPASy TrEMBL
Match: A0A6J1GZ68 (Probable 6-phosphogluconolactonase OS=Cucurbita moschata OX=3662 GN=LOC111458486 PE=3 SV=1) HSP 1 Score: 448.7 bits (1153), Expect = 1.9e-122 Identity = 224/238 (94.12%), Postives = 231/238 (97.06%), Query Frame = 0
BLAST of Clc05G25900 vs. ExPASy TrEMBL
Match: A0A6J1HTH6 (Probable 6-phosphogluconolactonase OS=Cucurbita maxima OX=3661 GN=LOC111467333 PE=3 SV=1) HSP 1 Score: 448.0 bits (1151), Expect = 3.2e-122 Identity = 222/238 (93.28%), Postives = 232/238 (97.48%), Query Frame = 0
BLAST of Clc05G25900 vs. TAIR 10
Match: AT1G13700.1 (6-phosphogluconolactonase 1 ) HSP 1 Score: 351.7 bits (901), Expect = 6.1e-97 Identity = 177/245 (72.24%), Postives = 202/245 (82.45%), Query Frame = 0
BLAST of Clc05G25900 vs. TAIR 10
Match: AT5G24400.1 (NagB/RpiA/CoA transferase-like superfamily protein ) HSP 1 Score: 256.1 bits (653), Expect = 3.5e-68 Identity = 124/224 (55.36%), Postives = 164/224 (73.21%), Query Frame = 0
BLAST of Clc05G25900 vs. TAIR 10
Match: AT3G49360.1 (6-phosphogluconolactonase 2 ) HSP 1 Score: 217.6 bits (553), Expect = 1.4e-56 Identity = 109/217 (50.23%), Postives = 150/217 (69.12%), Query Frame = 0
BLAST of Clc05G25900 vs. TAIR 10
Match: AT5G24420.1 (6-phosphogluconolactonase 5 ) HSP 1 Score: 209.5 bits (532), Expect = 3.7e-54 Identity = 103/215 (47.91%), Postives = 145/215 (67.44%), Query Frame = 0
BLAST of Clc05G25900 vs. TAIR 10
Match: AT5G24410.1 (6-phosphogluconolactonase 4 ) HSP 1 Score: 199.9 bits (507), Expect = 3.0e-51 Identity = 105/206 (50.97%), Postives = 138/206 (66.99%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|