Clc05G24960 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G24960
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	50S ribosomal protein L15
Location	ClcChr05: 32797181 .. 32801260 (+)
RNA-Seq Expression	Clc05G24960
Synteny	Clc05G24960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTATCCATGGCTGCCCTTCTTTCCTTATCTTCAACTTGCTTGACCAGAACAACCACTGCTCTGCCTTATCCAACCACTTCCTTCAAGGTATTTCACTATACCTTCCCTATTTCTTTCTTTACTTTCTTAATTGCATATTCAACACATTATCACAGTTCAATTTTCTGCTGCGTTGATGCTTCTATCATTTACGAAACTCTATTTCACTTGCATTTCCAGGGAAATGTGAAGATTCTCAACTCAAAGCAGCTCAGCGTTTCTTCACTCAGGCTCAAATTCAAGGTCGGAGATGGTAAACACTTGGTTGTTCGCAACCAGGCTGCTGCCTCTTCCCTGTCTGCCTCCCCCGTCGAGAGTGTGCGGTTTCGTCTGGACAATCTCGGACCACAGCCAGGTTCGAGGAAGAAGGGCAAGAGAAAGGGGAGAGGTATATCGGCGGGACAGGGCGGTAGCTGCGGATTTGGTATGAGAGGACAGAAATCAAGGTCTGGACCTGGTGTAAGGAAAGGATTCGAAGGTGGACAAATGCCTCTTTATCGAAGAATCCCAAAACTTAGAGGAATTGCAGGAGGTAATTCCTATCATTCTACTTAGTTGCCTTTTGTATATGAATTCTAGAACTCTACTTATGTGGCTGGTAGGCGTCTGCAATGGCAATTTCTGCTATATGTAGTGGTTGCTTCATTGAGTGATAGTCCAAATTATCTTTTCACTCTTATCTTGAAAACTTCCATTCATTGATCTCACTCTTTACTACTTAATTTCTTTTTACCTATTTAGTACTAGGAGGTCGTTGGACCAATTGCTAACAGTTGTTTGGAATTATTGCACTTGTAATTTGTGTAATTCCTTGTTACATTTTATTCCTCGATCGGAGTACATGCGGCCTTGTTAGATTTTAGCTATAAGATAAGTGGCGTTCTTCTCCCTGTTCCTTGAAACGTAATTGATGGTGTTTGGGCTAGAGCGATTAGGAAGCTGTTATGGTTCATGATGATGGTCGTCAAGTATCCTACAACGTGGGAGAGAGAATACTGTTCAAACTGGATGTAGGAGGTTGTTAATTTACTTTTCGCTTTCTGAGAAATGGTAATGATGTGTAAACGAGACAGGAGAATTATGAAAATGAGGGGAATAGATGATCTCTCAACCTAGCTGAAAGAATTACGAAAAGCTGGTCGAATGTCTCTGAAAGTGTAATTACTCAAGCTCCCATACAAAGTACACCATCCATGAACCCAAAGAAAAATAACTATCTAACATAATATTTTGTATAGTTACTATAGTCTTGTTGTTAAATCACCGATTGACCCAAAAGCTTGAGCTAATGGGTGAAAGTAATTTAATATCTTATCATCTAACACTCCTCACTTTTGGGCTTGAAATATGTAGAAGACCCAATAAGTGGAGGTCAATATCAATTGGGGAAGAAATAGTATTGAGTGGTTTGGACAAAGATCTCTTAGACCACATGGTCTAATATCATGTTAAATTATCCATTGATGCAAAAGCTTTTGGTTCAATAGATGGTTTAGTTGTTACTAGCTATGCCTTTGGTTAGAATAATTAGTTTATGAGAGGTATTTCAATCTCATATAAAGAGAGTTGAAGATCCCACATTGAAAAAATCAAGGGACCTCACAATATTTGTAAGATAGATAGGCTACTCCTCTTATTGCCAATTGTTTGAGATGGAACCACATTGTTATCTAACGAAAAGAATAGATTTTTTGATTTCTGCTTCCTGTTTCTCTTCTCATTTCTTACTATCTTTTCATAAAAAGAACATTCCAAGATATATCGTGTATGGCATTTGTTTTCCTTGTGGTCACCTTTGTATGAACTCCTTTCTCAGGCTGAACAATTGCTTTTGCTTTCAGGTATGCATGCTGGGTTACCTAAATATGTTCCAGTGAATCTGAAAGACATTGAAGAGGCAGGATTTCAGGAAGGGGAAGAGGTCTCCTTGGAAACGTTAAAAGAGAAGGGTTTGATCAACCCATCAGGAAGAGAAAGAAAACTCCCATTAAAGGTACTATTGTCACGTGTATCTACATTGTGAAGATTGCACAAGTGAATATCCAAATTGACATCGCGATTCCTACTCCAAGAAGTGAAACCAAAACTGAATGATTTAATTTAAAACAGATGTTTCTTAACTCATCAAGGTTATGGTGACTGATTCATAATTGCTTCACTTTGTCTTTCCTTCAGATTTTAGCAGATGGAGAGCTAAGTGTGAAGCTAAATATCAAAGCTCGGGCTTTTTCATCAGCAGCAAAAGAAAAGCTTGAAGCTGCTGGCTGCTCCCTTACTGTATTACCTGGACGAAAGAAGTGGGTTAAGCCATCAGTGGCTAAGAACCTCGCACGTGCGGAGGAATACTTTGCAAAGAAAAAGGCTGCGGCAGCTGCTGCAGAACAGGCTTCTGCTTGAATAATTGTAAAGTTGCAGTTGGTGACAAATTCCAGGTTAAATCTCTTCCTTAGTAAGTTTGAGCCTACGCTAGTTTGTGGCTTTAAGTCCAATTCCATGCTGTCTGATTGTATTATTGATTGATTTCAAGAGCAAAATTTTCTCTGAAACGTTGGTGCTCTCTTTTACTTTATTAAACTACCAAAAAAGAGTAAAAGCAATCTTTTCTTAAGAAAAAGTTTAGTTAAAAAATAGCCCTATTGCCCATTTGAACATAGTTTAATTGGATTAGGCATGTACTCTCGAGTCTCGACTAGAGGTTTGAATCTGGTCAATCCCTATTGAACTAACAAAAAGATGACGAAAAAAAAAAAAAAAAAAAAAAAAAACTCATAAATGGCGCCTTGAATATGAGTTGACTAGCCTAGAGAAGAGGAAATAAAGTATGGATGATTCAATTAATTTAGTCGTTTCCATCATTCTCAATCATGTCATCCACTAAGGTACGAGTCTAGGACCCATTCAAACATTTCTGCTTATCTAAACCAACCAAATCCGGATCAGTTTGGACATTTCTGATACGCTGAACTGTTGACTTTAAAATTGATTTGTATTGTTTAAAAATATTGCAAAATAAAATTAGAGTGGGAAAAGAAAAAACATATTTTAGTCAGAGCTATCTTTTTTAGCATATGGGTAGGATTTTAATAGAGCTATGGGGTTCATTCTTCTTGGATACCAGGAATCTACCACAGGATAGCAATAGTCAAATTAGAATGTGTCAATTTTGAAAATTTTTGGTCATTTTCATGATTGTTTGCTTCAATAAGTAATGTGCACTGTTGTTTTGGATGCAAGGCATGTGCTTTATTTATCACATATTGCTGGATGACTCATTTCCTCTTATTCAATAATGCCTGTTTGCGTCAAGAGAACTTGAAAGCGACCACAAAACAAAAGCTGCATCACTCATGGTGGTGCCCTTTCTCCATTATTCTAACAAGTTTGGATTTTCTTTCCATGTCTTTTACTCTCTCTCTCTCAAACTTTGTTTCGATGTAAAAGCCAAATACCCACGAGCCAAAAATGATTGTCTTTCCAAACAAACTAGTCTATATTAAGAGAAAAGCAAGGTCAAATCTGTCTTCCAAAACCCACAGAAATCCTTCAGCCGTTGGCCTGTTACACTTGCCTATAATCTCAACTTTGGCTTCTTCATCGGGGACTTTCTCCTTTTGGAGAGAGTTATCTCCTTATAGCATCTTCAAGAGGAATTGGTGGTTGGTTGTTGGTTTCGATGAATGTCAGTGTCAGAAAAAATATGCTATGTTATATCTTTCCTTGTATGGGAATGAAATTTTAGAGCCTTTTCTATATGCCTTCATAGGGAACTTGTTCGTAAATGTTGATATCGTATATTGCTGATGAGGAAATCGAGTTGAAGATTTACACGTTTTTTTTTTACCAAATTGAGTGGACTTCCACGTTGAAGTCCACGTTCTTGGTGTTTATTTATTTATTTTATGGTACCATCCTTTTGACCATACTAATTACAAAATTTGAGGTTATCTTTGAGTTCTTCAACCATTGTTGGATTGAACTATGGACCTTAAAAATAGTAATTTGTGTGTATTCTGTTCACTGATAAGTAAAATAGATCAGAT

mRNA sequence

TTTATCCATGGCTGCCCTTCTTTCCTTATCTTCAACTTGCTTGACCAGAACAACCACTGCTCTGCCTTATCCAACCACTTCCTTCAAGGTATTTCACTATACCTTCCCTATTTCTTTCTTTACTTTCTTAATTGCATATTCAACACATTATCACAGTTCAATTTTCTGCTGCGTTGATGCTTCTATCATTTACGAAACTCTATTTCACTTGCATTTCCAGGGAAATGTGAAGATTCTCAACTCAAAGCAGCTCAGCGTTTCTTCACTCAGGCTCAAATTCAAGGTCGGAGATGGTAAACACTTGGTTGTTCGCAACCAGGCTGCTGCCTCTTCCCTGTCTGCCTCCCCCGTCGAGAGTGTGCGGTTTCGTCTGGACAATCTCGGACCACAGCCAGGTTCGAGGAAGAAGGGCAAGAGAAAGGGGAGAGGTATATCGGCGGGACAGGGCGGTAGCTGCGGATTTGGTATGAGAGGACAGAAATCAAGGTCTGGACCTGGTGTAAGGAAAGGATTCGAAGGTGGACAAATGCCTCTTTATCGAAGAATCCCAAAACTTAGAGGAATTGCAGGAGGTATGCATGCTGGGTTACCTAAATATGTTCCAGTGAATCTGAAAGACATTGAAGAGGCAGGATTTCAGGAAGGGGAAGAGGTCTCCTTGGAAACGTTAAAAGAGAAGGGTTTGATCAACCCATCAGGAAGAGAAAGAAAACTCCCATTAAAGATTTTAGCAGATGGAGAGCTAAGTGTGAAGCTAAATATCAAAGCTCGGGCTTTTTCATCAGCAGCAAAAGAAAAGCTTGAAGCTGCTGGCTGCTCCCTTACTGTATTACCTGGACGAAAGAAGTGGGTTAAGCCATCAGTGGCTAAGAACCTCGCACGTGCGGAGGAATACTTTGCAAAGAAAAAGGCTGCGGCAGCTGCTGCAGAACAGGCTTCTGCTTGAATAATTGTAAAGTTGCAGTTGGTGACAAATTCCAGGCATGTGCTTTATTTATCACATATTGCTGGATGACTCATTTCCTCTTATTCAATAATGCCTGTTTGCGTCAAGAGAACTTGAAAGCGACCACAAAACAAAAGCTGCATCACTCATGGTGGTGCCCTTTCTCCATTATTCTAACAAGTTTGGATTTTCTTTCCATGTCTTTTACTCTCTCTCTCTCAAACTTTGTTTCGATGTAAAAGCCAAATACCCACGAGCCAAAAATGATTGTCTTTCCAAACAAACTAGTCTATATTAAGAGAAAAGCAAGGTCAAATCTGTCTTCCAAAACCCACAGAAATCCTTCAGCCGTTGGCCTGTTACACTTGCCTATAATCTCAACTTTGGCTTCTTCATCGGGGACTTTCTCCTTTTGGAGAGAGTTATCTCCTTATAGCATCTTCAAGAGGAATTGGTGGTTGGTTGTTGGTTTCGATGAATGTCAGTGTCAGAAAAAATATGCTATGTTATATCTTTCCTTGTATGGGAATGAAATTTTAGAGCCTTTTCTATATGCCTTCATAGGGAACTTGTTCGTAAATGTTGATATCGTATATTGCTGATGAGGAAATCGAGTTGAAGATTTACACGTTTTTTTTTTACCAAATTGAGTGGACTTCCACGTTGAAGTCCACGTTCTTGGTGTTTATTTATTTATTTTATGGTACCATCCTTTTGACCATACTAATTACAAAATTTGAGGTTATCTTTGAGTTCTTCAACCATTGTTGGATTGAACTATGGACCTTAAAAATAGTAATTTGTGTGTATTCTGTTCACTGATAAGTAAAATAGATCAGAT

Coding sequence (CDS)

ATGGCTGCCCTTCTTTCCTTATCTTCAACTTGCTTGACCAGAACAACCACTGCTCTGCCTTATCCAACCACTTCCTTCAAGGTATTTCACTATACCTTCCCTATTTCTTTCTTTACTTTCTTAATTGCATATTCAACACATTATCACAGTTCAATTTTCTGCTGCGTTGATGCTTCTATCATTTACGAAACTCTATTTCACTTGCATTTCCAGGGAAATGTGAAGATTCTCAACTCAAAGCAGCTCAGCGTTTCTTCACTCAGGCTCAAATTCAAGGTCGGAGATGGTAAACACTTGGTTGTTCGCAACCAGGCTGCTGCCTCTTCCCTGTCTGCCTCCCCCGTCGAGAGTGTGCGGTTTCGTCTGGACAATCTCGGACCACAGCCAGGTTCGAGGAAGAAGGGCAAGAGAAAGGGGAGAGGTATATCGGCGGGACAGGGCGGTAGCTGCGGATTTGGTATGAGAGGACAGAAATCAAGGTCTGGACCTGGTGTAAGGAAAGGATTCGAAGGTGGACAAATGCCTCTTTATCGAAGAATCCCAAAACTTAGAGGAATTGCAGGAGGTATGCATGCTGGGTTACCTAAATATGTTCCAGTGAATCTGAAAGACATTGAAGAGGCAGGATTTCAGGAAGGGGAAGAGGTCTCCTTGGAAACGTTAAAAGAGAAGGGTTTGATCAACCCATCAGGAAGAGAAAGAAAACTCCCATTAAAGATTTTAGCAGATGGAGAGCTAAGTGTGAAGCTAAATATCAAAGCTCGGGCTTTTTCATCAGCAGCAAAAGAAAAGCTTGAAGCTGCTGGCTGCTCCCTTACTGTATTACCTGGACGAAAGAAGTGGGTTAAGCCATCAGTGGCTAAGAACCTCGCACGTGCGGAGGAATACTTTGCAAAGAAAAAGGCTGCGGCAGCTGCTGCAGAACAGGCTTCTGCTTGA

Protein sequence

MAALLSLSSTCLTRTTTALPYPTTSFKVFHYTFPISFFTFLIAYSTHYHSSIFCCVDASIIYETLFHLHFQGNVKILNSKQLSVSSLRLKFKVGDGKHLVVRNQAAASSLSASPVESVRFRLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKKKAAAAAAEQASA

Homology

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BLAST of Clc05G24960 vs. NCBI nr
Match: XP_038891383.1 (50S ribosomal protein L15, chloroplastic [Benincasa hispida])

HSP 1 Score: 458.8 bits (1179), Expect = 3.9e-125
Identity = 256/307 (83.39%), Postives = 258/307 (84.04%), Query Frame = 0


Query: 1   MAALLSLSSTCLTRTTTALPYPTTSFKVFHYTFPISFFTFLIAYSTHYHSSIFCCVDASI 60
           MAALLSLSST LTRT TALPYPTTSFK                                 
Sbjct: 1   MAALLSLSSTSLTRTATALPYPTTSFK--------------------------------- 60

Query: 61  IYETLFHLHFQGNVKILNSKQLSVSSLRLKFKVGDGKHLVVRNQAAASSLSASPVESVRF 120
                      GNVKILN KQL++SSLRLKFKVGDGKHLVVRNQA ASSLSASPVESVRF
Sbjct: 61  -----------GNVKILNPKQLTISSLRLKFKVGDGKHLVVRNQAPASSLSASPVESVRF 120

Query: 121 RLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 180
           RLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI
Sbjct: 121 RLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 180

Query: 181 PKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKI 240
           PKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKI
Sbjct: 181 PKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKI 240

Query: 241 LADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKK 300
           LADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKK
Sbjct: 241 LADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKK 263

Query: 301 KAAAAAA 308
           KAAAA A
Sbjct: 301 KAAAATA 263

[Close]

BLAST of Clc05G24960 vs. NCBI nr
Match: XP_004135093.1 (50S ribosomal protein L15, chloroplastic [Cucumis sativus] >KGN52087.1 hypothetical protein Csa_008981 [Cucumis sativus])

HSP 1 Score: 449.9 bits (1156), Expect = 1.8e-122
Identity = 254/312 (81.41%), Postives = 258/312 (82.69%), Query Frame = 0


Query: 1   MAALLSLSSTCLTRTTTALPYPTTSFKVFHYTFPISFFTFLIAYSTHYHSSIFCCVDASI 60
           MAAL SLSS  LTRT TALPYPTTSFK                                 
Sbjct: 1   MAALFSLSSPSLTRTATALPYPTTSFK--------------------------------- 60

Query: 61  IYETLFHLHFQGNVKILNSKQLSVSSLRLKFKVGDGKHLVVRNQAAASSLSASPVESVRF 120
                      GNV ILNSK LS+SSLRLK K  DGKHLVVRNQAAASSLSASP E+VRF
Sbjct: 61  -----------GNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQAAASSLSASPAENVRF 120

Query: 121 RLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 180
           RLDNLGPQPGSRK+GKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI
Sbjct: 121 RLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 180

Query: 181 PKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKI 240
           PKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLE+LKEKGLINPSGRERKLPLKI
Sbjct: 181 PKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEKGLINPSGRERKLPLKI 240

Query: 241 LADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKK 300
           LADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKK
Sbjct: 241 LADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKK 268

Query: 301 KAAAAAAEQASA 313
           KAAAAAAEQASA
Sbjct: 301 KAAAAAAEQASA 268

[Close]

BLAST of Clc05G24960 vs. NCBI nr
Match: XP_008446604.1 (PREDICTED: 50S ribosomal protein L15, chloroplastic [Cucumis melo] >XP_008446605.1 PREDICTED: 50S ribosomal protein L15, chloroplastic [Cucumis melo])

HSP 1 Score: 449.1 bits (1154), Expect = 3.1e-122
Identity = 252/312 (80.77%), Postives = 258/312 (82.69%), Query Frame = 0


Query: 1   MAALLSLSSTCLTRTTTALPYPTTSFKVFHYTFPISFFTFLIAYSTHYHSSIFCCVDASI 60
           MAAL SLSST LTRT TALPYPTTSFK                                 
Sbjct: 1   MAALFSLSSTSLTRTATALPYPTTSFK--------------------------------- 60

Query: 61  IYETLFHLHFQGNVKILNSKQLSVSSLRLKFKVGDGKHLVVRNQAAASSLSASPVESVRF 120
                      GNV ILNSK LS+SS +LKFK  DGKHLVVRNQAAASSL ASP ++VRF
Sbjct: 61  -----------GNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQAAASSLYASPADNVRF 120

Query: 121 RLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 180
           RLDNLGPQPGSRK+GKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI
Sbjct: 121 RLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 180

Query: 181 PKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKI 240
           PKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKI
Sbjct: 181 PKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKI 240

Query: 241 LADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKK 300
           LADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKK
Sbjct: 241 LADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKK 268

Query: 301 KAAAAAAEQASA 313
           KAAAAAAEQ+SA
Sbjct: 301 KAAAAAAEQSSA 268

[Close]

BLAST of Clc05G24960 vs. NCBI nr
Match: XP_022984826.1 (50S ribosomal protein L15, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 443.4 bits (1139), Expect = 1.7e-120
Identity = 250/310 (80.65%), Postives = 257/310 (82.90%), Query Frame = 0


Query: 1   MAALLSLSSTCLTRTTTALPYPTTSFKVFHYTFPISFFTFLIAYSTHYHSSIFCCVDASI 60
           MAALLSLSS+ LTRT  ALP+PTTSFK                                 
Sbjct: 1   MAALLSLSSSSLTRTAIALPHPTTSFK--------------------------------- 60

Query: 61  IYETLFHLHFQGNVKILNSKQLSVSSLRLKFKVGDGKHLVVRNQAAASSLSASPVESVRF 120
                      GNVKILNSKQ S SSL+LKFKVGDGK LVVR+QAAASSLSASPVESVRF
Sbjct: 61  -----------GNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQAAASSLSASPVESVRF 120

Query: 121 RLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 180
           RLDNLGPQ GSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI
Sbjct: 121 RLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 180

Query: 181 PKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKI 240
           PKLRGIAGGMHAGLPKYVPVNLKDIE AGFQEGEEVSLE+LKEKGLINPSGRERKLPLKI
Sbjct: 181 PKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEKGLINPSGRERKLPLKI 240

Query: 241 LADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKK 300
           LADGELSVKLNIKARAFSSAAKEKLEA GCSLTVLPGRKKWVKPSVAKNLARA+EYFAKK
Sbjct: 241 LADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKPSVAKNLARADEYFAKK 266

Query: 301 KAAAAAAEQA 311
           +AAAAAAEQA
Sbjct: 301 RAAAAAAEQA 266

[Close]

BLAST of Clc05G24960 vs. NCBI nr
Match: XP_022956924.1 (50S ribosomal protein L15, chloroplastic-like [Cucurbita moschata] >KAG6601285.1 50S ribosomal protein L15, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032073.1 50S ribosomal protein L15, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 439.5 bits (1129), Expect = 2.4e-119
Identity = 248/310 (80.00%), Postives = 255/310 (82.26%), Query Frame = 0


Query: 1   MAALLSLSSTCLTRTTTALPYPTTSFKVFHYTFPISFFTFLIAYSTHYHSSIFCCVDASI 60
           MAALLSLSS+ LTRT  ALP+PTT FK                                 
Sbjct: 1   MAALLSLSSSSLTRTAIALPHPTTPFK--------------------------------- 60

Query: 61  IYETLFHLHFQGNVKILNSKQLSVSSLRLKFKVGDGKHLVVRNQAAASSLSASPVESVRF 120
                      GNVKILNSKQ S S L+LKFKVGDGK LVVR+QAAASSLSASPVESVRF
Sbjct: 61  -----------GNVKILNSKQFSFSPLKLKFKVGDGKPLVVRSQAAASSLSASPVESVRF 120

Query: 121 RLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 180
           RLDNLGPQ GSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI
Sbjct: 121 RLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 180

Query: 181 PKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKI 240
           PKLRGIAGGMHAGLPKYVPVNLKDIE AGFQEGEEVSLE+LKEKGLINPSGRERKLPLKI
Sbjct: 181 PKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEKGLINPSGRERKLPLKI 240

Query: 241 LADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKK 300
           LADGELSVKLNIKARAFSSAAKEKLEA GCSLTVLPGRKKWVKPSVAKNLARA+EYFAKK
Sbjct: 241 LADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKPSVAKNLARADEYFAKK 266

Query: 301 KAAAAAAEQA 311
           +AAAAAAEQA
Sbjct: 301 RAAAAAAEQA 266

[Close]

BLAST of Clc05G24960 vs. ExPASy Swiss-Prot
Match: P25873 (50S ribosomal protein L15, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL15 PE=1 SV=2)

HSP 1 Score: 326.6 bits (836), Expect = 3.0e-88
Identity = 177/244 (72.54%), Postives = 202/244 (82.79%), Query Frame = 0


Query: 70  FQGNVKILNSKQLSVSSLRLKFKVGD------GKHLVVRNQAAASSLSASPVESVRFRLD 129
           F+GNV +L +    + SL+L   +         + LVV +Q AA+  S++ V   RFRLD
Sbjct: 27  FKGNVSVLGANPSQILSLKLNQTLKTRNQQQFARPLVVVSQTAAT--SSAVVAPERFRLD 86

Query: 130 NLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKL 189
           NLGPQPGSRKK KRKGRGISAGQG SCGFGMRGQKSRSGPG+ +GFEGGQ  LYRR+PKL
Sbjct: 87  NLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKL 146

Query: 190 RGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKILAD 249
           RGIAGGM +GLPKY+PVN+KDIE AGFQEG+EVSLETLK+KGLINPSGRERKLPLKIL  
Sbjct: 147 RGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVSLETLKQKGLINPSGRERKLPLKILGT 206

Query: 250 GELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKKKAA 308
           GELS+KL  KARAFS+ AKEKLEA+GC+LTVLPGRKKWVKPSVAKN ARA+EYFAKK+AA
Sbjct: 207 GELSMKLTFKARAFSTQAKEKLEASGCTLTVLPGRKKWVKPSVAKNQARADEYFAKKRAA 266

[Close]

BLAST of Clc05G24960 vs. ExPASy Swiss-Prot
Match: P31165 (50S ribosomal protein L15, chloroplastic (Fragment) OS=Pisum sativum OX=3888 GN=RPL15 PE=2 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 8.7e-88
Identity = 181/244 (74.18%), Postives = 199/244 (81.56%), Query Frame = 0


Query: 70  FQGNVKILNSKQLSVSSL---RLKFKVGDGKHLVVRNQAAASSLSASPVESVRFRLDNLG 129
           F+GNVK L +K      L   R K +V       V N+AA++    S  E+VRFRLDNLG
Sbjct: 19  FKGNVKTLVAKPCLCPCLKIQRTKLRVS------VVNKAASAYNVKSSGENVRFRLDNLG 78

Query: 130 PQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGI 189
           PQPGSRK+ KRKGRGI+AGQG SCGFGMRGQKSRSGPG+ +GFEGGQMPLYRR+PKLRGI
Sbjct: 79  PQPGSRKRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRLPKLRGI 138

Query: 190 AGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKILADGEL 249
           AGGMHAGLPKYV VNL DIE AGFQ+GEEVSLETLK K +INPSGRERKLPLKILADGEL
Sbjct: 139 AGGMHAGLPKYVNVNLTDIENAGFQDGEEVSLETLKAKRVINPSGRERKLPLKILADGEL 198

Query: 250 SVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKKKAAAAA 309
           S KL IKA AFS++AKEKLE AGCSL VLPGRKKWVKPSVAKNLARAEEYFAKK+    A
Sbjct: 199 SKKLTIKAGAFSTSAKEKLEYAGCSLIVLPGRKKWVKPSVAKNLARAEEYFAKKRGGETA 256

Query: 310 AEQA 311
           +E A
Sbjct: 259 SEPA 256

[Close]

BLAST of Clc05G24960 vs. ExPASy Swiss-Prot
Match: P22798 (50S ribosomal protein L15, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL15 PE=1 SV=3)

HSP 1 Score: 319.3 bits (817), Expect = 4.8e-86
Identity = 171/247 (69.23%), Postives = 203/247 (82.19%), Query Frame = 0


Query: 70  FQGNVKILNSKQLSVSSLRLKFK---VGDGKHLVVRNQAAASSLSAS--PVESVRFRLDN 129
           F+GN+        + + L+L  +     +   LVV   A++S++S S       RFRLDN
Sbjct: 25  FKGNINNFRINPFNFAPLKLHLRNIVKKESTRLVVVASASSSNVSPSIGSGSETRFRLDN 84

Query: 130 LGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLR 189
           LGPQPGSRKKGKRKGRG +AGQGGSCGFGMRGQKSRSGPG+ +GFEGGQMPLYRRIPKLR
Sbjct: 85  LGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRIPKLR 144

Query: 190 GIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKILADG 249
           GIAGGM AGLPKYVP+NL+DIE AGF+EGEEVSLE+LK KG+INPSGRER+LPLKIL +G
Sbjct: 145 GIAGGMRAGLPKYVPINLRDIEVAGFKEGEEVSLESLKAKGIINPSGRERRLPLKILGEG 204

Query: 250 ELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKKKAAA 309
           ELS KL IKARAFS +AKEKLEAAGCS+TVLPGRKK++K SV KNLARA+EYFAKK+AA+
Sbjct: 205 ELSTKLQIKARAFSGSAKEKLEAAGCSVTVLPGRKKYIKESVRKNLARADEYFAKKRAAS 264

Query: 310 AAAEQAS 312
           A+  +++
Sbjct: 265 ASEAESA 271

[Close]

BLAST of Clc05G24960 vs. ExPASy Swiss-Prot
Match: P31160 (50S ribosomal protein L15 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=rplO PE=3 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 1.4e-32
Identity = 84/158 (53.16%), Postives = 109/158 (68.99%), Query Frame = 0


Query: 121 RLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 180
           +LDNL PQPG++K+ +R GRGI+AGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+
Sbjct: 2   KLDNLAPQPGAKKRKRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRV 61

Query: 181 PKLRGIAGGMHAGLPK---YVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLP 240
           PKL+      H  L     Y  VN+  +  AG   G EV+LE+L   G++     +   P
Sbjct: 62  PKLK------HFPLINRKFYTVVNVGAL--AGLAAGTEVTLESLMAVGIVT----QNDGP 121

Query: 241 LKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVL 276
           LKIL DGELSV L++ A AF++ A++K+EAAG S+ ++
Sbjct: 122 LKILGDGELSVSLSVSAAAFTATAQQKIEAAGGSIALV 147

[Close]

BLAST of Clc05G24960 vs. ExPASy Swiss-Prot
Match: Q5N0U8 (50S ribosomal protein L15 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=rplO PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.4e-32
Identity = 84/158 (53.16%), Postives = 109/158 (68.99%), Query Frame = 0


Query: 121 RLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 180
           +LDNL PQPG++K+ +R GRGI+AGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+
Sbjct: 2   KLDNLAPQPGAKKRKRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRV 61

Query: 181 PKLRGIAGGMHAGLPK---YVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLP 240
           PKL+      H  L     Y  VN+  +  AG   G EV+LE+L   G++     +   P
Sbjct: 62  PKLK------HFPLINRKFYTVVNVGAL--AGLAAGTEVTLESLMAVGIVT----QNDGP 121

Query: 241 LKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVL 276
           LKIL DGELSV L++ A AF++ A++K+EAAG S+ ++
Sbjct: 122 LKILGDGELSVSLSVSAAAFTATAQQKIEAAGGSIALV 147

[Close]

BLAST of Clc05G24960 vs. ExPASy TrEMBL
Match: A0A0A0KUI5 (Ribosomal_L18e/L15P domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G609730 PE=3 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 8.7e-123
Identity = 254/312 (81.41%), Postives = 258/312 (82.69%), Query Frame = 0


Query: 1   MAALLSLSSTCLTRTTTALPYPTTSFKVFHYTFPISFFTFLIAYSTHYHSSIFCCVDASI 60
           MAAL SLSS  LTRT TALPYPTTSFK                                 
Sbjct: 1   MAALFSLSSPSLTRTATALPYPTTSFK--------------------------------- 60

Query: 61  IYETLFHLHFQGNVKILNSKQLSVSSLRLKFKVGDGKHLVVRNQAAASSLSASPVESVRF 120
                      GNV ILNSK LS+SSLRLK K  DGKHLVVRNQAAASSLSASP E+VRF
Sbjct: 61  -----------GNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQAAASSLSASPAENVRF 120

Query: 121 RLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 180
           RLDNLGPQPGSRK+GKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI
Sbjct: 121 RLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 180

Query: 181 PKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKI 240
           PKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLE+LKEKGLINPSGRERKLPLKI
Sbjct: 181 PKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEKGLINPSGRERKLPLKI 240

Query: 241 LADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKK 300
           LADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKK
Sbjct: 241 LADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKK 268

Query: 301 KAAAAAAEQASA 313
           KAAAAAAEQASA
Sbjct: 301 KAAAAAAEQASA 268

[Close]

BLAST of Clc05G24960 vs. ExPASy TrEMBL
Match: A0A1S3BFG1 (50S ribosomal protein L15, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489288 PE=3 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.5e-122
Identity = 252/312 (80.77%), Postives = 258/312 (82.69%), Query Frame = 0


Query: 1   MAALLSLSSTCLTRTTTALPYPTTSFKVFHYTFPISFFTFLIAYSTHYHSSIFCCVDASI 60
           MAAL SLSST LTRT TALPYPTTSFK                                 
Sbjct: 1   MAALFSLSSTSLTRTATALPYPTTSFK--------------------------------- 60

Query: 61  IYETLFHLHFQGNVKILNSKQLSVSSLRLKFKVGDGKHLVVRNQAAASSLSASPVESVRF 120
                      GNV ILNSK LS+SS +LKFK  DGKHLVVRNQAAASSL ASP ++VRF
Sbjct: 61  -----------GNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQAAASSLYASPADNVRF 120

Query: 121 RLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 180
           RLDNLGPQPGSRK+GKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI
Sbjct: 121 RLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 180

Query: 181 PKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKI 240
           PKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKI
Sbjct: 181 PKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKI 240

Query: 241 LADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKK 300
           LADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKK
Sbjct: 241 LADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKK 268

Query: 301 KAAAAAAEQASA 313
           KAAAAAAEQ+SA
Sbjct: 301 KAAAAAAEQSSA 268

[Close]

BLAST of Clc05G24960 vs. ExPASy TrEMBL
Match: A0A6J1J6D0 (50S ribosomal protein L15, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482969 PE=3 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 8.1e-121
Identity = 250/310 (80.65%), Postives = 257/310 (82.90%), Query Frame = 0


Query: 1   MAALLSLSSTCLTRTTTALPYPTTSFKVFHYTFPISFFTFLIAYSTHYHSSIFCCVDASI 60
           MAALLSLSS+ LTRT  ALP+PTTSFK                                 
Sbjct: 1   MAALLSLSSSSLTRTAIALPHPTTSFK--------------------------------- 60

Query: 61  IYETLFHLHFQGNVKILNSKQLSVSSLRLKFKVGDGKHLVVRNQAAASSLSASPVESVRF 120
                      GNVKILNSKQ S SSL+LKFKVGDGK LVVR+QAAASSLSASPVESVRF
Sbjct: 61  -----------GNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQAAASSLSASPVESVRF 120

Query: 121 RLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 180
           RLDNLGPQ GSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI
Sbjct: 121 RLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 180

Query: 181 PKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKI 240
           PKLRGIAGGMHAGLPKYVPVNLKDIE AGFQEGEEVSLE+LKEKGLINPSGRERKLPLKI
Sbjct: 181 PKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEKGLINPSGRERKLPLKI 240

Query: 241 LADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKK 300
           LADGELSVKLNIKARAFSSAAKEKLEA GCSLTVLPGRKKWVKPSVAKNLARA+EYFAKK
Sbjct: 241 LADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKPSVAKNLARADEYFAKK 266

Query: 301 KAAAAAAEQA 311
           +AAAAAAEQA
Sbjct: 301 RAAAAAAEQA 266

[Close]

BLAST of Clc05G24960 vs. ExPASy TrEMBL
Match: A0A6J1H0G5 (50S ribosomal protein L15, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458464 PE=3 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 1.2e-119
Identity = 248/310 (80.00%), Postives = 255/310 (82.26%), Query Frame = 0


Query: 1   MAALLSLSSTCLTRTTTALPYPTTSFKVFHYTFPISFFTFLIAYSTHYHSSIFCCVDASI 60
           MAALLSLSS+ LTRT  ALP+PTT FK                                 
Sbjct: 1   MAALLSLSSSSLTRTAIALPHPTTPFK--------------------------------- 60

Query: 61  IYETLFHLHFQGNVKILNSKQLSVSSLRLKFKVGDGKHLVVRNQAAASSLSASPVESVRF 120
                      GNVKILNSKQ S S L+LKFKVGDGK LVVR+QAAASSLSASPVESVRF
Sbjct: 61  -----------GNVKILNSKQFSFSPLKLKFKVGDGKPLVVRSQAAASSLSASPVESVRF 120

Query: 121 RLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 180
           RLDNLGPQ GSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI
Sbjct: 121 RLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 180

Query: 181 PKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKI 240
           PKLRGIAGGMHAGLPKYVPVNLKDIE AGFQEGEEVSLE+LKEKGLINPSGRERKLPLKI
Sbjct: 181 PKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEKGLINPSGRERKLPLKI 240

Query: 241 LADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKK 300
           LADGELSVKLNIKARAFSSAAKEKLEA GCSLTVLPGRKKWVKPSVAKNLARA+EYFAKK
Sbjct: 241 LADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKPSVAKNLARADEYFAKK 266

Query: 301 KAAAAAAEQA 311
           +AAAAAAEQA
Sbjct: 301 RAAAAAAEQA 266

[Close]

BLAST of Clc05G24960 vs. ExPASy TrEMBL
Match: A0A6J1DAS8 (50S ribosomal protein L15, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111018748 PE=3 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 6.4e-118
Identity = 243/312 (77.88%), Postives = 254/312 (81.41%), Query Frame = 0


Query: 1   MAALLSLSSTCLTRTTTALPYPTTSFKVFHYTFPISFFTFLIAYSTHYHSSIFCCVDASI 60
           MA+LLSLS++ L+R  TA+  PTTSFK                                 
Sbjct: 1   MASLLSLSASSLSRAATAVSLPTTSFK--------------------------------- 60

Query: 61  IYETLFHLHFQGNVKILNSKQLSVSSLRLKFKVGDGKHLVVRNQAAASSLSASPVESVRF 120
                      G+VKILNSK  ++SS RLKFKVGDGKHLV RNQAAASSLSAS VE VRF
Sbjct: 61  -----------GDVKILNSKPFNISSFRLKFKVGDGKHLVFRNQAAASSLSASSVEGVRF 120

Query: 121 RLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 180
           RLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI
Sbjct: 121 RLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 180

Query: 181 PKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKI 240
           PKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKI
Sbjct: 181 PKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKI 240

Query: 241 LADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKK 300
           L DGELSVKLNIKAR+FSSAAK+KLEA GCSLTVLPGRKKWVKPSVAKNLARAEEYFAKK
Sbjct: 241 LGDGELSVKLNIKARSFSSAAKQKLEAVGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKK 268

Query: 301 KAAAAAAEQASA 313
           KAAAAA +QASA
Sbjct: 301 KAAAAAEDQASA 268

[Close]

BLAST of Clc05G24960 vs. TAIR 10
Match: AT3G25920.1 (ribosomal protein L15 )

HSP 1 Score: 326.6 bits (836), Expect = 2.1e-89
Identity = 177/244 (72.54%), Postives = 202/244 (82.79%), Query Frame = 0


Query: 70  FQGNVKILNSKQLSVSSLRLKFKVGD------GKHLVVRNQAAASSLSASPVESVRFRLD 129
           F+GNV +L +    + SL+L   +         + LVV +Q AA+  S++ V   RFRLD
Sbjct: 27  FKGNVSVLGANPSQILSLKLNQTLKTRNQQQFARPLVVVSQTAAT--SSAVVAPERFRLD 86

Query: 130 NLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKL 189
           NLGPQPGSRKK KRKGRGISAGQG SCGFGMRGQKSRSGPG+ +GFEGGQ  LYRR+PKL
Sbjct: 87  NLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKL 146

Query: 190 RGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKILAD 249
           RGIAGGM +GLPKY+PVN+KDIE AGFQEG+EVSLETLK+KGLINPSGRERKLPLKIL  
Sbjct: 147 RGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVSLETLKQKGLINPSGRERKLPLKILGT 206

Query: 250 GELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKKKAA 308
           GELS+KL  KARAFS+ AKEKLEA+GC+LTVLPGRKKWVKPSVAKN ARA+EYFAKK+AA
Sbjct: 207 GELSMKLTFKARAFSTQAKEKLEASGCTLTVLPGRKKWVKPSVAKNQARADEYFAKKRAA 266

[Close]

BLAST of Clc05G24960 vs. TAIR 10
Match: AT5G64670.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 4.9e-09
Identity = 53/147 (36.05%), Postives = 80/147 (54.42%), Query Frame = 0


Query: 132 RKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMH 191
           RK   RKGRGI +G+G + G G +GQK+R    ++ GFEGGQ PL RR+PK RG      
Sbjct: 75  RKLKTRKGRGIGSGKGKTAGRGHKGQKARG--TMKFGFEGGQTPLRRRLPK-RGFKNKFK 134

Query: 192 AGLPKYVPVNL----KDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKILADGELS 251
                + PV L    K I        E ++++TLK+ G I   G++ +  ++++  G   
Sbjct: 135 L---HFQPVGLGKIAKLINAGKIDSHELITMKTLKDVGAI---GKQIEDGVRLMGRGADD 194

Query: 252 VK--LNIKARAFSSAAKEKLEAAGCSL 273
           +K  L+ +    +  AKE +EAAG S+
Sbjct: 195 IKWPLHFEVSRVTVRAKEVVEAAGGSV 212

The following BLAST results are available for this feature:

BLAST of Clc05G24960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891383.1	3.9e-125	83.39	50S ribosomal protein L15, chloroplastic [Benincasa hispida]	[more]
XP_004135093.1	1.8e-122	81.41	50S ribosomal protein L15, chloroplastic [Cucumis sativus] >KGN52087.1 hypotheti...	[more]
XP_008446604.1	3.1e-122	80.77	PREDICTED: 50S ribosomal protein L15, chloroplastic [Cucumis melo] >XP_008446605...	[more]
XP_022984826.1	1.7e-120	80.65	50S ribosomal protein L15, chloroplastic-like [Cucurbita maxima]	[more]
XP_022956924.1	2.4e-119	80.00	50S ribosomal protein L15, chloroplastic-like [Cucurbita moschata] >KAG6601285.1...	[more]

BLAST of Clc05G24960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P25873	3.0e-88	72.54	50S ribosomal protein L15, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1...	[more]
P31165	8.7e-88	74.18	50S ribosomal protein L15, chloroplastic (Fragment) OS=Pisum sativum OX=3888 GN=...	[more]
P22798	4.8e-86	69.23	50S ribosomal protein L15, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL15 P...	[more]
P31160	1.4e-32	53.16	50S ribosomal protein L15 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-80...	[more]
Q5N0U8	1.4e-32	53.16	50S ribosomal protein L15 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / S...	[more]

BLAST of Clc05G24960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUI5	8.7e-123	81.41	Ribosomal_L18e/L15P domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_...	[more]
A0A1S3BFG1	1.5e-122	80.77	50S ribosomal protein L15, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489288...	[more]
A0A6J1J6D0	8.1e-121	80.65	50S ribosomal protein L15, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1H0G5	1.2e-119	80.00	50S ribosomal protein L15, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1DAS8	6.4e-118	77.88	50S ribosomal protein L15, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of Clc05G24960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25920.1	2.1e-89	72.54	ribosomal protein L15	[more]
AT5G64670.1	4.9e-09	36.05	Ribosomal protein L18e/L15 superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.100.10.10		coord: 197..274 e-value: 4.5E-20 score: 73.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..170
None	No IPR available	PANTHER	PTHR12934:SF13	BNAA06G33230D PROTEIN	coord: 69..307
IPR021131	Ribosomal protein L18e/L15P	PFAM	PF00828	Ribosomal_L27A	coord: 146..273 e-value: 2.3E-31 score: 109.1
IPR005749	Ribosomal protein L15, bacterial-type	TIGRFAM	TIGR01071	TIGR01071	coord: 122..272 e-value: 5.0E-39 score: 131.4
IPR005749	Ribosomal protein L15, bacterial-type	PANTHER	PTHR12934	50S RIBOSOMAL PROTEIN L15	coord: 69..307
IPR001196	Ribosomal protein L15, conserved site	PROSITE	PS00475	RIBOSOMAL_L15	coord: 239..269
IPR030878	Ribosomal protein L15	HAMAP	MF_01341	Ribosomal_L15	coord: 122..275 score: 18.737522
IPR036227	Ribosomal L18e/L15P superfamily	SUPERFAMILY	52080	Ribosomal proteins L15p and L18e	coord: 123..274

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G24960.2	Clc05G24960.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome