Clc05G23620 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G23620
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Pectate lyase
Location	ClcChr05: 31626194 .. 31634394 (-)
RNA-Seq Expression	Clc05G23620
Synteny	Clc05G23620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAAGTACTTTATGAAGAGAATCTTTTTACATGCAAACTTTTACAGAGAAGAGGATGAAAAAAGTAGGATTTGTAGGAAGAAGGGAAGGGTTGGCCATTTGCAGTATAAGAATATGCATTCTTTAAGCCACCCTCCAAAGAATCTAAATCCAACAGACAAAGCAATTAACTTTACTTGTTTTTCTTCATTTTAGGGCAGCAGAGAAAAGATATCACAGGTTCCTCTTAACTTTTTGGATAAGTTTTCCCCTTTTTCTCTTTCCCTTTAAACCATCATCTTTTTGGGGTTTTTTTTTTTTTTTTTTCCTTTTCTCATTACTTAGAATAATTAACTAACAAGTTAAGAATGCAAAATACAAGTAATGAAGGGAGACTTTGGAAATAGAAAGGAAAAAGAAAAAAAAAAAAAAAGGAAAAACAAGGGAAAGAGCTTTGTGTTATCTTCTAAATCAGCTTCTTCCTATGCAAATCCCACCTCTTCTCATCCATTCAAATTTCTTCCTCTCCTGATATGAACCAAAAACCCTAAAACCCCACCAAGAAAGTAACCTTTAAAAAAAAAGCCCTTTTTTTTTTTATTTGTTTCTTATAATTATTATTTTAATTGTGGGTTTATTATATAAACACACCCACCATTTTCTCTTTTTCTACAAAAATTAGGCTCTCTTAGCAGCCATGTTTTTATTTATGTTTCTGAAACTAGATTTGTTTGAAAACAGTCTTTTTTTCTTCGATTAATACCACAGAACAAAGCTGTCAGAAACATCCTCGAGTTCCTCATTGTACCTTTGAGGATGTTTCCTGTTCTTAGCATTCTCTTGATATGGATGTCTGCTTCAATCTTTGGTGTTGCTTCTGGTTCTTTCAATCTTACATTACCCCATCAGCATCCTGACCCTGATTCTGTTGCTGATGAACTTCAAAGGTAAATTCACATTCTTAATTTTCTTATTCTGGGGTTTTTGTTGCTTTTTTAATTGTTGTTCTTGTTGTTTTTCATCTGGGTTTATTTGGAATTGTTTGCTTTTCAAAGAAATTGACGAACCCATATGAATATTTCTCACTTTTTCCTTTCTTTTCTTGAATTTTTTTTATAATGCAAACAGAAAACAGAGCATTGCTCTGTTTTCTGTTTTCTTATCCTTTTCTTGGAGGATGGTCAATGTGTATCTGTTCTTCTTCTTTTTCCATCTGGGTTTCTATAAAAAATTGTTTTCTTTGAAGAAATATAAAAATTCTCTTCATTTTCCCACCAACCAAACAAAAACAGAGCATTCCTCTGTTTCTCTGCAACCTCAAATCCCCTGTTTTCTCTGCAGGACAGTGAATGCATCTGTATGGAGAAGACAAATGCTGTCCGTCGAATCAAAGGATCAAACTTTCTCTTGTCTCACCGGAAACCCCATCGATGATTGCTGGCGGTGCGACCCGAATTGGGCGGCAAACCGACAGCGACTGGCCGACTGCGGTATCGGGTTCGGCCGGGATGCCATGGGTGGCAAAGGCGGAAAGATCTACATCGTTACCGACTCGTCGGATTTGGATCCGGCGAACCCTACTCCGGGGACTCTCCGGCACGCTGTGATCCAATTCGAACCGCTGTGGATCATCTTCTCCGCCGACATGACTATCAAGCTGAAATACGAGCTTATCATTAACAGTTTCAAAACGATCGACGGCCGTGGAGCCAACGTCCACATCACCGGCGGCGGATGCATCACCATTCAATACGTGTCCAATGTCATCATCCACAACATCCACGTGCACCACTGTAAACCCTCCGGCAATGCCAACATAAGGTCCGTAAAACGAACTTTCAAATATTGAAGTTGATAGGTTAAGAAACTTAGATATTACAATCTGTGATTAAAAAAATAAAAACTTTTTTATACACCTTTACTTTTTACTTTTTCAGTTGTTTTGAAATATAACAAAATAAACAAACGTATTTATAAATATAGTAAAATATATTTACACACTATTATTTCGGTGTTTATCAAATATGATATTTTGTTATATTTGATAATATTTCTAACAGTTTTGTCATTTAAAATAATTATCCTTGTAATTTTATTTTATTATTATTATTCTTTTATCTTAAATCGCAAAAACCAACTTTAAAATATGGTAGTAGTTGCAATTACACCCTCTAATTTTCAATGGTAAATATTAGGCCCTCAAACTTGTACCATCATTGAAATTGGACCCTCAAACTTACAATAATTATAGAAATTGGACATCCAAATGATAAGAATTGAACCCTTAAACTTATACAATTGTTACAATTCCTATAATTCTGTAAGTTTGAAGGTTCAATTTTAACATTTGTATAAGTTTAAGGACTCAATTTTTACAATTAAAAGTTTAAAATTGCAATTGTAACTACCATCATACTTCAAGGGTAATTTTTGCAATTTGCTCTACTTTGCAGTACTTAGTTGCTATTTGAACCACCCACATTTTGTTAAAACAAAAAATTAGTTTGTCGGGTAACATCATGTGACCAAAACTTTTAAAATCATTTTTTTAGTGCAACAATTAAGGGGAAGGGTATCAATTACTGCCGAGCTAAGTTTGATTTCCCTCCAATTTTTAAAATGTTAAAAGTTTGAAGAGCTTGAATGATTGAGTTGGGTTGAGGGCATGAATTTAGAAAATCTACAATTAATGAAAAAAAGAAAGAAAAAAAAACCCTAGCTATGAGATAGTAGTGGGCCGGACAAAAAAGAGGTAGATTGGAAGTATTGTAGAAATTACTTAATAGGTTTATCCAACTTGTTGTTGGAAGAACTCACAAAGCAAACATGGTTTTGTCCCATAAACATGAGTCATTTTGCACCTTTTAACTATTATTCATAAGGTATATATGCTTATTACTGCTAAAGATCCAAAAGCTTAAACTAATAGTTACGGATAATTTGTAGATCGACCCCAACTCACGTGGGGCATAGAGGGCTATCAGACGGAGATGGGATCTCAATTTTTAGCTCAAGAAAGATATGGATCGATCATTGCTCATTGTCATACTGCACAGATGGGCTAATAGACGCAATAATGGGATCAACAGGAATTACAATATCAAATAGCTACTTCTCGCACCATGATGAAGTGATGTTGTTAGGGCACGACGATCGGTATGTGCAAGACTCGGGGATGCAAGTCACCATTGCCTTCAACCACTTTGGCGAGGCATTAGTCCAACGCATGCCCCGTTGTAGACATGGCTACATTCACGTCGTCAACAATGACTTCACTGCTTGGGAAATGTATGCCATTGGAGGTAGTGCCCAACCCACTATTAACAGCCAAGGCAATCGCTACACCGCTCCTGTGGACCCCAATGCCAAAGAGGTACCTCTCTCTATCTCTCAATTCAAACCTATTGTTTTTCTAATCAAAGCAAACCTTTTTTGTAAGTAAATGGATGAAACAATATACTTATATTGTATACTTTAGTTAACTAATCACGCTAAATTATATGTTCATACTCTAAATTGTTTATTTAGTTTAGTCCTAAATGAGTCTCTAATCTTTCAATTTTCTGTCAAATTATTAATTCATTTGACATCAGTAGTTGATTTTAAAGACATTCTTAAAATAATACCAGCAAAATATCACCGATAATTTTTAAAAAATATTATATATATATATATATATACTTTTTTTTTTCTATGAGAACAAAATAGTCCTAATCATTAAAGACTAACAAAATTGATGACGGTCCTAAAATTTATTTGGCAGTTGAGTATTTACTAAAATAATAAAATAATAAAATGCAAGTTGAGTATTTACTAAAATAATGGAATAACATAAAGTTTCAATAAAATAAAATAAAAAGTTGATTAAAAAAATGGAATCAGTGGGGGGAGCGGCGGCGCTCATGAGCCGAACTTTTGACTCGAATGTGTGAAGTTGTAGTGGGGGAAAGCAAAGATTAGATTCTTTATCCCACTTGCTTGGGCGGCGCATGACGTTGACGCGCTGCCAATAAATTACCATTTCTTAATGGCCCCATCTCTAATTTGTCCTTTCTTATTGAGCTTTTTGGCCGGACTTGGAGGGAGCGGAATTTGAGGAAGGAAAAAAAAAAAAAAAACCAAAACCATCCTTGGAATTCTTTTCCAGATTTTTTGACGGTGACGGCGACGGCGATGGACAGATTTTGATTTGACATGTTGGTGATGTTATAGGTGACGAGACGTTTAGACGCGGCGGAGACGGAGTGGGCGGGGTGGAATTGGCGGACGGACGGCGACATTTTGGTGAACGGCGCGTTTTTTGTACCTTCCGGTGCCGGACTTAGCACCCAGTACGGTAAGGCTTCCAGCGTGGAGCCTAAGTCTGTGGCTCTCATCAATCAACTCACTATGAACGCCGGTGTTTTGGGCGCCCCCAGGTAATTTCTTTTTCTTCCTTTTATTTACATTTTTCTTAAAATAAATATATTTCTTTTTTTTTTTTGGTCAAATTAAATGGTAGTTAAATATTGGGATAACATATTAAATTAGACCAAATTGTAAAATCTACCAAAATATATTAGTAGTTGTAATTAGATCCTCAAACTTTTAATTTTAAAAATTGAGTCCCTAACTTCTTCAAATTGGAACTTCAAACTTACAATAATTGTAAAAATTAGACTCACAACGATAAAAATTGAACTCTTAAACTAATACAAATGTTATAATTTATAAATTATACAAGTTTAAAAGTCAATTTGACCCAATTTTAACCTTTATAAATTTTGAAAGTTTAATCTTTTAAAATCGAAAGTTTAAGAGTCTAATTGCTACTACTTCCATACTTCCGGGGTGGTTTTTGCAATTTACTCTTCAAATTAAAAATAATAACCAAAATACCTCCTTTCTCCCCCTTCTTTTACCCTTTCTCACCTCTTCTTTCATTATTATTTTAAATTTTAAATGTCAAGTGAACATTTAAAATAAATAATGTTACAAAATTAAAAAACCTATTTCTTAAGATTCAATGATTAAAAATGTCATTTTCATTTCTAATTGTTTGAATTTTCAATTTGTAATTTAACAATTGTATATCAAAGTTCTAATCAAATAATTGATATGTTTGGTAGCTTCTTAAACCTAAAAAAGTATAAATCTCAAGGTTAAAGGTTTAATTTTCCCAAAAAAAAAATATCCATATTGTCATGTTTTACAAGTCTATATGTATTGAAAAATGCCTAATAGATATTTAGAATTTGAAATTTGTCTAATTAATCTCTAGACTTTGAAGATAGATACATCCTAGATATAAACATATTATAAAATTTAAGAAGTTCAAGATTGTAGTTGATAACTTGTGAGACACAAAATAAAAATAAAAATAGAAAATTTAAGGGCATTTTTTATACCATTGGAAAATGTATAGACCAAAGTTGGTAATTTAATGAAAATTTTGTTTAACTTAATTTTGTTCATAAAATTAACTGTCTTTCCAGAAGTCCAAAGCCACATCAAAATTGTTCACATGATGTGAAATGTTTTAAGGTTTGATTAAGTCTTTTTAATACGGTAAAATGATATGATGACGACATATTCATTTTCCATTGCATGTGGATCATAAAGACGTTTTCTTTTATTCAAAAAGTCAGTAATTGAAAAGAAAGATAGAATAGCATATTTTTTTCTTGCATCATTATTTTTCTGACTTAATTTTGATTATACTCTAAGGCATTCCATATAATTAAAATAAAGTCTAGAAATAATTAATTTTAGGGTAATTATTTTTAATGTCAAAACTATATTAAAATAATTAATTTTATTATATTTTTAAATATCTTAACTCATTTTGCTATATTTAAAAATAAATCTTAATTTTATAGCAAAAAATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTCTTAACGTATGGGGCCTATGTTATCACTTTCAATGTGACAACAAATTCTCAAATTAACTTCATATAAACCATAATGATTCCAACAAGCTCCACTTTGATTCAATCTTAATTTTAGATTTAATTAAGATTATGTTAAAATATCATTTTAATCTTTATAAGGATTAGTTGATGTAATTTTAATCGTTCAATTTAAGTTATAAGTTAGATAATAATAAGGTTTAAATACTACTTTGGTCCTCGTACTTTGACGTATGGTTCATTTTGGTCCTCTTACTTTTAAAATGTTCATTTTGGTTTATATACTTTTAACTTTGATTTATTTTGGTTTCCTACCTTAACTCAAAAAATGCATATACAAAACAAAATGCAGAGAAAAAAATAAGATTTATTTATTTATTTATCATTTTTTTTTTTAACCAGAGACGAAGATTGTGATATTTTAAAATTAAACTTGACCCCACTAAATATTATCATCGCAAAAGCAAGTGGGACACATAACACTACCAATCTTTTTAGGCTTTAACACATCATATATATTTTAAAGTGTGAAAGTGCTTCCCTTTTTGCTTCTAGGGGTTAGGGATTTTGTCAAGCTTTTCCATTTCAACGTGGAAAAGCTTCTTTTAAGTGCTTCTATATCTTTGGGATTTGTGATAAAGGTTGGCCTAAAATTTTGTGTAAAAAGAAACAAAGAAATGGGGAATTGATTCAATTGGAACCCAAATTGAGCAACACATGCATGTGTTTAAGCATAGAAAAAAGAAAGGCTAAGCTTTGAGAAATGGGGTTGCTTTTCTTTCTCTCTTCTTTGCAAATCCCCTATGTGTGTAATTTCTCTTCATAATATTCTATTCCTTTTGCTTTCCAACCATGGCCCCTCCTCCCCCTCCCCTTTATAGATATAGGACAATTCAATTTAAGACAATGAAAGATGATCTACATTCAAAATTAAATAGTGCTCGTGACTTTTCTAATAGGTGGCATATGCGTGGAGTGAGATGTGTTTTGAGGATCTCATATTAGAAAGATAAGAAATGATCTCACAATCTTTACAAGATACATGGGGTTACTCTTCTCATTATCCAATTGATTTTCAGATAGAGCCATGTGTGTACCTCGTATTAGTATTAGAGCCTTTGAAGCCCAAATGAGCATATGGTTCGAAATCTAGATCAAATTCAAGAATTGTGAACCCAATGAAATAACATCTCTTCAGGAAGCATGATAAGGATATCTCAAATAGAAAACGAGAAAATACCTCGCAATCTTTATAAAATACATTAGTTATTCCTTTCAATGCTAATTAATTTTGAGATGGAAACTCATGTTCATCTAATAATAATATAAAATTTTAAAGTGGAGTAAGAAAACAACTTTTTGATGTATACTAAAAAAATCAAGAACACGAGTCAATAAAAATTCTCAAAGAAGTACTTAGTGACATGGTTGCCTTCTTTTTTAAACTACAAGTTTAGTCCTTAAACTTTTATGTTTGTATTTATTTGATCTCTAATTTTTTAAAAGAGTTTAATAGGTCTTTGAATTTTTGATTTCGTGTCTCTATTAAACCCAAAACTCTAAATGTTGTTTCTAATAGGTCTTTAAGACTTTCAATTGTGTATTTAATAAAGATCTATTAGATACTTCTTAAAGTTCAAGAACTTAATGAACATATATCGTTGAAGAAATCAATTAAATACTTTCTAAAGTTTATAGATGTATTAGACGCAAGATTGAAAGTTGAACAACCAAATAAATACTAATCCACTAAATTTCTAATTTAATTGATTAATTTTTTTTGTTTTAATTTCTTTGAAAATTGAGTTATTTTTAAATATAGGAAAATGAACAAAAAAATATTTACAAATATGATTATCTATTAGTGTGCATCAGTATCAGTATTCATCACAGAGGTGCAATGATATTTTTTTTTTTGGTATATTTAAAAATATTTGTAGCAATATTTTGAAATATTTATTTATTCAATTATTGTTTCTATGCAGGTATAATGCTGGTCAAGGAATTGTATATCCGGGATTCAGCGGTGGGAATGGTGGGAATGGTGATGAGGGATATGGGGGTAATACTGTCATAAATAATAGTCCAATTTATGAAAATGGTGGTGGTAATGGTAATGATGATTACTACGGCATGATATTTAAAGCTGGTGGTTATAGGGTATTGCCAATATTGCCCTCCATAAACTTATGTACTCAAATTCTATTACTTTTGTACATAGTCACAAATTATAGTGGCCTATTCACATTATAGAAAGCTCATATAATTAATTAAATTAAGTTTAATTAATTAT

mRNA sequence

ATGTCAAAGTACTTTATGAAGAGAATCTTTTTACATGCAAACTTTTACAGAGAAGAGGATGAAAAAAGTAGGATTTGTAGGAAGAAGGGAAGGGGCAGCAGAGAAAAGATATCACAGAACAAAGCTGTCAGAAACATCCTCGAGTTCCTCATTGTACCTTTGAGGATGTTTCCTGTTCTTAGCATTCTCTTGATATGGATGTCTGCTTCAATCTTTGGTGTTGCTTCTGGTTCTTTCAATCTTACATTACCCCATCAGCATCCTGACCCTGATTCTGTTGCTGATGAACTTCAAAGGACAGTGAATGCATCTGTATGGAGAAGACAAATGCTGTCCGTCGAATCAAAGGATCAAACTTTCTCTTGTCTCACCGGAAACCCCATCGATGATTGCTGGCGGTGCGACCCGAATTGGGCGGCAAACCGACAGCGACTGGCCGACTGCGGTATCGGGTTCGGCCGGGATGCCATGGGTGGCAAAGGCGGAAAGATCTACATCGTTACCGACTCGTCGGATTTGGATCCGGCGAACCCTACTCCGGGGACTCTCCGGCACGCTGTGATCCAATTCGAACCGCTGTGGATCATCTTCTCCGCCGACATGACTATCAAGCTGAAATACGAGCTTATCATTAACAGTTTCAAAACGATCGACGGCCGTGGAGCCAACGTCCACATCACCGGCGGCGGATGCATCACCATTCAATACGTGTCCAATGTCATCATCCACAACATCCACGTGCACCACTGTAAACCCTCCGGCAATGCCAACATAAGATCGACCCCAACTCACGTGGGGCATAGAGGGCTATCAGACGGAGATGGGATCTCAATTTTTAGCTCAAGAAAGATATGGATCGATCATTGCTCATTGTCATACTGCACAGATGGGCTAATAGACGCAATAATGGGATCAACAGGAATTACAATATCAAATAGCTACTTCTCGCACCATGATGAAGTGATGTTGTTAGGGCACGACGATCGGTATGTGCAAGACTCGGGGATGCAAGTCACCATTGCCTTCAACCACTTTGGCGAGGCATTAGTCCAACGCATGCCCCGTTGTAGACATGGCTACATTCACGTCGTCAACAATGACTTCACTGCTTGGGAAATGTATGCCATTGGAGGTAGTGCCCAACCCACTATTAACAGCCAAGGCAATCGCTACACCGCTCCTGTGGACCCCAATGCCAAAGAGGTGACGAGACGTTTAGACGCGGCGGAGACGGAGTGGGCGGGGTGGAATTGGCGGACGGACGGCGACATTTTGGTGAACGGCGCGTTTTTTGTACCTTCCGGTGCCGGACTTAGCACCCAGTACGGTAAGGCTTCCAGCGTGGAGCCTAAGTCTGTGGCTCTCATCAATCAACTCACTATGAACGCCGGTGTTTTGGGCGCCCCCAGGTATAATGCTGGTCAAGGAATTGTATATCCGGGATTCAGCGGTGGGAATGGTGGGAATGGTGATGAGGGATATGGGGGTAATACTGTCATAAATAATAGTCCAATTTATGAAAATGGTGGTGGTAATGGTAATGATGATTACTACGGCATGATATTTAAAGCTGGTGGTTATAGGGTATTGCCAATATTGCCCTCCATAAACTTATGTACTCAAATTCTATTACTTTTGTACATAGTCACAAATTATAGTGGCCTATTCACATTATAGAAAGCTCATATAATTAATTAAATTAAGTTTAATTAATTAT

Coding sequence (CDS)

ATGTCAAAGTACTTTATGAAGAGAATCTTTTTACATGCAAACTTTTACAGAGAAGAGGATGAAAAAAGTAGGATTTGTAGGAAGAAGGGAAGGGGCAGCAGAGAAAAGATATCACAGAACAAAGCTGTCAGAAACATCCTCGAGTTCCTCATTGTACCTTTGAGGATGTTTCCTGTTCTTAGCATTCTCTTGATATGGATGTCTGCTTCAATCTTTGGTGTTGCTTCTGGTTCTTTCAATCTTACATTACCCCATCAGCATCCTGACCCTGATTCTGTTGCTGATGAACTTCAAAGGACAGTGAATGCATCTGTATGGAGAAGACAAATGCTGTCCGTCGAATCAAAGGATCAAACTTTCTCTTGTCTCACCGGAAACCCCATCGATGATTGCTGGCGGTGCGACCCGAATTGGGCGGCAAACCGACAGCGACTGGCCGACTGCGGTATCGGGTTCGGCCGGGATGCCATGGGTGGCAAAGGCGGAAAGATCTACATCGTTACCGACTCGTCGGATTTGGATCCGGCGAACCCTACTCCGGGGACTCTCCGGCACGCTGTGATCCAATTCGAACCGCTGTGGATCATCTTCTCCGCCGACATGACTATCAAGCTGAAATACGAGCTTATCATTAACAGTTTCAAAACGATCGACGGCCGTGGAGCCAACGTCCACATCACCGGCGGCGGATGCATCACCATTCAATACGTGTCCAATGTCATCATCCACAACATCCACGTGCACCACTGTAAACCCTCCGGCAATGCCAACATAAGATCGACCCCAACTCACGTGGGGCATAGAGGGCTATCAGACGGAGATGGGATCTCAATTTTTAGCTCAAGAAAGATATGGATCGATCATTGCTCATTGTCATACTGCACAGATGGGCTAATAGACGCAATAATGGGATCAACAGGAATTACAATATCAAATAGCTACTTCTCGCACCATGATGAAGTGATGTTGTTAGGGCACGACGATCGGTATGTGCAAGACTCGGGGATGCAAGTCACCATTGCCTTCAACCACTTTGGCGAGGCATTAGTCCAACGCATGCCCCGTTGTAGACATGGCTACATTCACGTCGTCAACAATGACTTCACTGCTTGGGAAATGTATGCCATTGGAGGTAGTGCCCAACCCACTATTAACAGCCAAGGCAATCGCTACACCGCTCCTGTGGACCCCAATGCCAAAGAGGTGACGAGACGTTTAGACGCGGCGGAGACGGAGTGGGCGGGGTGGAATTGGCGGACGGACGGCGACATTTTGGTGAACGGCGCGTTTTTTGTACCTTCCGGTGCCGGACTTAGCACCCAGTACGGTAAGGCTTCCAGCGTGGAGCCTAAGTCTGTGGCTCTCATCAATCAACTCACTATGAACGCCGGTGTTTTGGGCGCCCCCAGGTATAATGCTGGTCAAGGAATTGTATATCCGGGATTCAGCGGTGGGAATGGTGGGAATGGTGATGAGGGATATGGGGGTAATACTGTCATAAATAATAGTCCAATTTATGAAAATGGTGGTGGTAATGGTAATGATGATTACTACGGCATGATATTTAAAGCTGGTGGTTATAGGGTATTGCCAATATTGCCCTCCATAAACTTATGTACTCAAATTCTATTACTTTTGTACATAGTCACAAATTATAGTGGCCTATTCACATTATAG

Protein sequence

MSKYFMKRIFLHANFYREEDEKSRICRKKGRGSREKISQNKAVRNILEFLIVPLRMFPVLSILLIWMSASIFGVASGSFNLTLPHQHPDPDSVADELQRTVNASVWRRQMLSVESKDQTFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDLDPANPTPGTLRHAVIQFEPLWIIFSADMTIKLKYELIINSFKTIDGRGANVHITGGGCITIQYVSNVIIHNIHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCTDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPRCRHGYIHVVNNDFTAWEMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEWAGWNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRYNAGQGIVYPGFSGGNGGNGDEGYGGNTVINNSPIYENGGGNGNDDYYGMIFKAGGYRVLPILPSINLCTQILLLLYIVTNYSGLFTL

Homology

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BLAST of Clc05G23620 vs. NCBI nr
Match: XP_038893100.1 (probable pectate lyase 18 isoform X1 [Benincasa hispida] >XP_038893101.1 probable pectate lyase 18 isoform X1 [Benincasa hispida])

HSP 1 Score: 1015.4 bits (2624), Expect = 1.9e-292
Identity = 485/503 (96.42%), Postives = 497/503 (98.81%), Query Frame = 0


Query: 56  MFPVLSILLIWMSASIFGVASGSFNLTLPHQHPDPDSVADELQRTVNASVWRRQMLSVES 115
           MFPVL+IL +WMSASIFG ASGSFNLTLPHQHPDPDSVADELQRTVNASVWRR+MLS+ES
Sbjct: 1   MFPVLAILFVWMSASIFGFASGSFNLTLPHQHPDPDSVADELQRTVNASVWRRKMLSIES 60

Query: 116 KDQTFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDLDP 175
           KDQTFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDLDP
Sbjct: 61  KDQTFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDLDP 120

Query: 176 ANPTPGTLRHAVIQFEPLWIIFSADMTIKLKYELIINSFKTIDGRGANVHITGGGCITIQ 235
           ANPTPGTLRHAVIQFEPLWIIFSADMTI+LKYELIINSFKTIDGRGANVHITGGGCITIQ
Sbjct: 121 ANPTPGTLRHAVIQFEPLWIIFSADMTIRLKYELIINSFKTIDGRGANVHITGGGCITIQ 180

Query: 236 YVSNVIIHNIHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCT 295
           YVSNVIIHN+HVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCT
Sbjct: 181 YVSNVIIHNVHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCT 240

Query: 296 DGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPR 355
           DGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPR
Sbjct: 241 DGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPR 300

Query: 356 CRHGYIHVVNNDFTAWEMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEWAG 415
           CRHGYIHVVNNDFTAWEMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEWAG
Sbjct: 301 CRHGYIHVVNNDFTAWEMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEWAG 360

Query: 416 WNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRYNAGQ 475
           WNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRYN GQ
Sbjct: 361 WNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRYNTGQ 420

Query: 476 GIVYPGFSGGNGGNGDEGYGGNTVINNSPIYENGGGNGNDDYYGMIFKAGGYRVLPILPS 535
           GIVYPGF+G NGGNGDEGYGGNTVINNSPIYENGG NGNDDYYGMIFKA G+RVLP+LPS
Sbjct: 421 GIVYPGFNGENGGNGDEGYGGNTVINNSPIYENGGANGNDDYYGMIFKANGHRVLPLLPS 480

Query: 536 INLCTQILLLLYIVTNYSGLFTL 559
           INLCTQI++LLYIVTNYSGLFT+
Sbjct: 481 INLCTQIIILLYIVTNYSGLFTI 503

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BLAST of Clc05G23620 vs. NCBI nr
Match: XP_008446817.1 (PREDICTED: probable pectate lyase 18 [Cucumis melo])

HSP 1 Score: 963.8 bits (2490), Expect = 6.6e-277
Identity = 470/511 (91.98%), Postives = 485/511 (94.91%), Query Frame = 0


Query: 56  MFPVLSILLIWMSASIFGV-ASGSFNLTLPHQHPDPDSVADELQRTVNASVWRRQMLSVE 115
           MFPVL+ L IWM ASI  V +S SFNLTLPHQHPDPDSVADELQRTVNAS+WRRQMLS+E
Sbjct: 1   MFPVLTTLFIWMFASISCVSSSSSFNLTLPHQHPDPDSVADELQRTVNASIWRRQMLSIE 60

Query: 116 SKDQTFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDLD 175
           SKDQTFSCLTGNPIDDCWRCDPNW+ANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDLD
Sbjct: 61  SKDQTFSCLTGNPIDDCWRCDPNWSANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDLD 120

Query: 176 PANPTPGTLRHAVIQFEPLWIIFSADMTIKLKYELIINSFKTIDGRGANVHITGGGCITI 235
           PANPTPGTLRHAVIQFEPLWIIFSADMTI+LKYELIINSFKTIDGRGANVHITGGGCITI
Sbjct: 121 PANPTPGTLRHAVIQFEPLWIIFSADMTIRLKYELIINSFKTIDGRGANVHITGGGCITI 180

Query: 236 QYVSNVIIHNIHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYC 295
           QYVSNVIIHN+HVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYC
Sbjct: 181 QYVSNVIIHNVHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYC 240

Query: 296 TDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMP 355
           TDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMP
Sbjct: 241 TDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMP 300

Query: 356 RCRHGYIHVVNNDFTAWEMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEWA 415
           RCRHGYIHVVNNDFTAW+MYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEWA
Sbjct: 301 RCRHGYIHVVNNDFTAWQMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEWA 360

Query: 416 GWNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRYNAG 475
           GWNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRY  G
Sbjct: 361 GWNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRYTGG 420

Query: 476 QGIVYPGFSGGNGGNGDEGYGGNTVINNSPIYENGGG-----NGNDDYYGMIFKAGGYRV 535
           +GIVYPGFSGGNGGNGDEGYGGNTVINNSPIYENGGG     NGNDDY+GMIFKA G R+
Sbjct: 421 EGIVYPGFSGGNGGNGDEGYGGNTVINNSPIYENGGGGNGNSNGNDDYFGMIFKANGNRI 480

Query: 536 LPILPSIN-LCT-QILLLLYIVTNYSGLFTL 559
            PI  S+N LCT  I+ L+YIV  YS LF+L
Sbjct: 481 FPIFSSVNYLCTLLIIFLMYIVAYYSALFSL 511

[Close]

BLAST of Clc05G23620 vs. NCBI nr
Match: XP_011655861.1 (probable pectate lyase 18 [Cucumis sativus] >KGN52235.1 hypothetical protein Csa_008983 [Cucumis sativus])

HSP 1 Score: 959.5 bits (2479), Expect = 1.2e-275
Identity = 470/509 (92.34%), Postives = 484/509 (95.09%), Query Frame = 0


Query: 56  MFP-VLSILLIWM-SASIFGVASGSFNLTLPHQHPDPDSVADELQRTVNASVWRRQMLSV 115
           MFP VL+ L IWM ++SI  V+S SFNLTLPHQHPDPDSVADELQRTVNASVWRRQMLS+
Sbjct: 1   MFPRVLTTLFIWMVASSISCVSSSSFNLTLPHQHPDPDSVADELQRTVNASVWRRQMLSI 60

Query: 116 ESKDQTFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDL 175
           ESKDQTFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDL
Sbjct: 61  ESKDQTFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDL 120

Query: 176 DPANPTPGTLRHAVIQFEPLWIIFSADMTIKLKYELIINSFKTIDGRGANVHITGGGCIT 235
           DP NPTPGTLRHAVIQFEPLWIIFSADMTI+LKYELIINSFKTIDGRGANVHITGGGCIT
Sbjct: 121 DPTNPTPGTLRHAVIQFEPLWIIFSADMTIRLKYELIINSFKTIDGRGANVHITGGGCIT 180

Query: 236 IQYVSNVIIHNIHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSY 295
           IQYVSNVIIHN+HVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSY
Sbjct: 181 IQYVSNVIIHNVHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSY 240

Query: 296 CTDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRM 355
           CTDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRM
Sbjct: 241 CTDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRM 300

Query: 356 PRCRHGYIHVVNNDFTAWEMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEW 415
           PRCRHGYIHVVNNDFTAW+MYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEW
Sbjct: 301 PRCRHGYIHVVNNDFTAWQMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEW 360

Query: 416 AGWNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRYNA 475
           AGWNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRYN 
Sbjct: 361 AGWNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRYNG 420

Query: 476 GQGIVYPGFSGGNGGNGDEGYGGNTVINNSPIYENGG-------GNGNDDYYGMIFKAGG 535
           G+GIVYPGFSGG+GGNGDEGYGGNTVINNSPIYENGG       GNGNDDY+GMIFKA G
Sbjct: 421 GEGIVYPGFSGGSGGNGDEGYGGNTVINNSPIYENGGGSGGYGNGNGNDDYFGMIFKANG 480

Query: 536 YRVLPILPSIN-LCT-QILLLLYIVTNYS 554
           +R  PI  S+N LCT  I+ LLYIVTNYS
Sbjct: 481 HRTFPIFSSLNYLCTLLIIFLLYIVTNYS 509

[Close]

BLAST of Clc05G23620 vs. NCBI nr
Match: XP_022138994.1 (probable pectate lyase 18 [Momordica charantia])

HSP 1 Score: 939.1 bits (2426), Expect = 1.7e-269
Identity = 456/504 (90.48%), Postives = 478/504 (94.84%), Query Frame = 0


Query: 56  MFPVLSILLIWMSASIFGVASGSFNLTLPHQHPDPDSVADELQRTVNASVWRRQMLSVES 115
           MFPVLSILLIWMS S+F VAS SFNLTLPHQHPDPDSVADELQR VNAS+ RRQMLS+ES
Sbjct: 1   MFPVLSILLIWMSGSVFNVASASFNLTLPHQHPDPDSVADELQRRVNASISRRQMLSLES 60

Query: 116 KDQTFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDLDP 175
           KD+ FSCL+GNPIDDCWRCDPNWAANRQRLADCGIGFGRDA+GGKGGKIYIV+DSSD DP
Sbjct: 61  KDEAFSCLSGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAVGGKGGKIYIVSDSSDSDP 120

Query: 176 ANPTPGTLRHAVIQFEPLWIIFSADMTIKLKYELIINSFKTIDGRGANVHITGGGCITIQ 235
           ANPTPGTLRHAVIQFEPLWIIFSADMTI+LKYELI+NSFKTIDGRGANVHITGGGCITIQ
Sbjct: 121 ANPTPGTLRHAVIQFEPLWIIFSADMTIRLKYELIVNSFKTIDGRGANVHITGGGCITIQ 180

Query: 236 YVSNVIIHNIHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCT 295
           YVSN+IIHNIHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCT
Sbjct: 181 YVSNIIIHNIHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCT 240

Query: 296 DGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPR 355
           DGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPR
Sbjct: 241 DGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPR 300

Query: 356 CRHGYIHVVNNDFTAWEMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEWAG 415
           CRHGYIHVVNNDFTAWEMYAIGGSA+PTINSQGNRYTAP+DPNAKEVTRRLDAAET+W+ 
Sbjct: 301 CRHGYIHVVNNDFTAWEMYAIGGSARPTINSQGNRYTAPLDPNAKEVTRRLDAAETDWSA 360

Query: 416 WNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRYNAGQ 475
           WNWRTDGDILVNGAFFVPSGAG+STQYGKASSVEPKSVALINQLTMNAGVL APRYN+GQ
Sbjct: 361 WNWRTDGDILVNGAFFVPSGAGVSTQYGKASSVEPKSVALINQLTMNAGVLAAPRYNSGQ 420

Query: 476 GIVYPGFSGGNGGNGDEGYGGNTVINNSPIYENGGGNGNDDYYGMIFKAGGYRVLPILP- 535
           GIVYPGFSG N G+G   YGGNTVINNSPI  NGGG G DD+YGMIFKAGGYRV  + P 
Sbjct: 421 GIVYPGFSGNNDGSGIGEYGGNTVINNSPIGGNGGG-GEDDFYGMIFKAGGYRVSSLPPL 480

Query: 536 SINLCTQILLLLYIVTNYSGLFTL 559
           SINL  QI+++LYIV NY GLFTL
Sbjct: 481 SINLWIQIVIILYIVMNYCGLFTL 503

[Close]

BLAST of Clc05G23620 vs. NCBI nr
Match: XP_023543015.1 (probable pectate lyase 18 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 921.8 bits (2381), Expect = 2.9e-264
Identity = 453/504 (89.88%), Postives = 468/504 (92.86%), Query Frame = 0


Query: 56  MFPVLSILLIWMSASIFGVASGSFNLTLPHQHPDPDSVADELQRTVNASVWRRQMLSVES 115
           MFPVLSILLIWMS   F VAS SFNLTLPHQHPDPDSVADELQRTVNAS+ RR+ LS+ES
Sbjct: 1   MFPVLSILLIWMSGLFFLVASASFNLTLPHQHPDPDSVADELQRTVNASISRRKALSIES 60

Query: 116 KDQTFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDLDP 175
           KDQ FSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSD +P
Sbjct: 61  KDQAFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDSNP 120

Query: 176 ANPTPGTLRHAVIQFEPLWIIFSADMTIKLKYELIINSFKTIDGRGANVHITGGGCITIQ 235
            NPTPGTLRHAVIQFEPLWIIFSADMTIKLKYELIINSFKTIDGRGANVHITGGGCITIQ
Sbjct: 121 ENPTPGTLRHAVIQFEPLWIIFSADMTIKLKYELIINSFKTIDGRGANVHITGGGCITIQ 180

Query: 236 YVSNVIIHNIHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCT 295
           YVSN+IIHNIHVHHC PSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCT
Sbjct: 181 YVSNIIIHNIHVHHCVPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCT 240

Query: 296 DGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPR 355
           DGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPR
Sbjct: 241 DGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPR 300

Query: 356 CRHGYIHVVNNDFTAWEMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEWAG 415
           CRHGYIHVVNNDFTAWEMYAIGGSA+PTINSQGNRY APV+PNAKEVTRRLDAAETEW  
Sbjct: 301 CRHGYIHVVNNDFTAWEMYAIGGSARPTINSQGNRYVAPVNPNAKEVTRRLDAAETEWTA 360

Query: 416 WNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRYNAGQ 475
           WNWRTDGDILVNGAFFVPSGAGLSTQYGKASS EPKSVALINQLTMNAGVLGAPRY+ G+
Sbjct: 361 WNWRTDGDILVNGAFFVPSGAGLSTQYGKASSTEPKSVALINQLTMNAGVLGAPRYSNGE 420

Query: 476 GIVYPGFSGGNGGNGDEGYGGNTVINNSPIYENGGGNGNDDYYGMIFKAGGYRVL-PILP 535
           GIVYPGFSG  GG G+ GYGG TVINNSP+Y N GG G DD+YGMIFK GG RV  P  P
Sbjct: 421 GIVYPGFSGSTGG-GNGGYGGGTVINNSPMYGNSGG-GEDDFYGMIFKGGGNRVSPPWSP 480

Query: 536 SINLCTQILLLLYIVTNYSGLFTL 559
            + LC QIL++LYIVTN SGL TL
Sbjct: 481 PMILCVQILVVLYIVTNNSGLLTL 502

[Close]

BLAST of Clc05G23620 vs. ExPASy Swiss-Prot
Match: Q9SCP2 (Probable pectate lyase 12 OS=Arabidopsis thaliana OX=3702 GN=At3g53190 PE=2 SV=2)

HSP 1 Score: 590.1 bits (1520), Expect = 2.6e-167
Identity = 288/450 (64.00%), Postives = 338/450 (75.11%), Query Frame = 0


Query: 49  FLIVPLRMFPVLSILLIWMSASIFGVASGSFNLTLPHQHPDPDSVADELQRTVNASVWRR 108
           FL+VP  +F +L+  L                L +P  HPDP+ VA ++Q  VNAS+ RR
Sbjct: 15  FLLVPQMVFSMLNRTL----------------LLIP--HPDPELVAYQVQWKVNASITRR 74

Query: 109 QMLSVESKDQTFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVT 168
           Q L    +  +  C+TGNPIDDCW+CDPNW  NRQ LADCGIGFG+ A+GGKGG+ Y VT
Sbjct: 75  QALDTTDQAGSTPCITGNPIDDCWKCDPNWPNNRQGLADCGIGFGQYALGGKGGQFYFVT 134

Query: 169 DSSDLDPANPTPGTLRHAVIQFEPLWIIFSADMTIKLKYELIINSFKTIDGRGANVHITG 228
           DSSD D  NP PGTLR+ VIQ EPLWI+F ++M IKLK ELI NS+KT+DGRGANVHI G
Sbjct: 135 DSSDDDAVNPKPGTLRYGVIQEEPLWIVFPSNMMIKLKQELIFNSYKTLDGRGANVHIVG 194

Query: 229 GGCITIQYVSNVIIHNIHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDH 288
           GGCIT+QYVSN+IIHNIH+HHC  SGN N+RS+PTH G R  SDGDGISIF S+ IWIDH
Sbjct: 195 GGCITLQYVSNIIIHNIHIHHCYQSGNTNVRSSPTHYGFRTKSDGDGISIFGSKDIWIDH 254

Query: 289 CSLSYCTDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEA 348
           CSLS C DGLIDA+MGSTGITISN++FSHH+EVMLLGH D Y  DSGMQVTIAFNHFGE 
Sbjct: 255 CSLSRCKDGLIDAVMGSTGITISNNFFSHHNEVMLLGHSDHYEPDSGMQVTIAFNHFGEK 314

Query: 349 LVQRMPRCRHGYIHVVNNDFTAWEMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDA 408
           L+QRMPRCR GYIHVVNNDFT WEMYAIGGS  PTINSQGNRYTAP +P AKEVT+R++ 
Sbjct: 315 LIQRMPRCRRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPTNPFAKEVTKRVET 374

Query: 409 AETEWAGWNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGA 468
            + +W GWNWR++GDILVNGAFFV SG G   +Y KA SVEPKS + I Q+T ++GVLG 
Sbjct: 375 PDGDWKGWNWRSEGDILVNGAFFVASGEGAEMRYEKAYSVEPKSASFITQITFHSGVLGV 434

Query: 469 PRYNAGQGIVYPGFSGGNGGNGDEGYGGNT 499
              N   G+     +G  G +G + Y   T
Sbjct: 435 GGRNNNLGMWTT--TGSEGTSGLDSYNDYT 444

[Close]

BLAST of Clc05G23620 vs. ExPASy Swiss-Prot
Match: Q93Z04 (Probable pectate lyase 13 OS=Arabidopsis thaliana OX=3702 GN=PMR6 PE=1 SV=1)

HSP 1 Score: 589.7 bits (1519), Expect = 3.4e-167
Identity = 289/483 (59.83%), Postives = 355/483 (73.50%), Query Frame = 0


Query: 75  ASGSFNLTLPHQHPDPDSVADELQRTVNASVWRRQM------LSVESKDQTFSCLTGNPI 134
           A+   NLTLPHQHP PDSVA  + R+VN S+ RRQ+       S  S   + SC TGNPI
Sbjct: 22  ATKPLNLTLPHQHPSPDSVALHVIRSVNESLARRQLSSPSSSSSSSSSSSSSSCRTGNPI 81

Query: 135 DDCWRC-DPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDLDPANPTPGTLRHAV 194
           DDCWRC D +W+ NRQRLADC IGFG   +GGK GKIY+VTDSSD +P NPTPGTLR+ V
Sbjct: 82  DDCWRCSDADWSTNRQRLADCSIGFGHGTLGGKNGKIYVVTDSSDNNPTNPTPGTLRYGV 141

Query: 195 IQFEPLWIIFSADMTIKLKYELIINSFKTIDGRGANVHITGGGCITIQYVSNVIIHNIHV 254
           IQ EPLWI+FS++M I+LK ELIINS+KT+DGRG+ VHITG GC+T+QYV ++IIHN+H+
Sbjct: 142 IQEEPLWIVFSSNMLIRLKQELIINSYKTLDGRGSAVHITGNGCLTLQYVQHIIIHNLHI 201

Query: 255 HHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCTDGLIDAIMGSTG 314
           + CKPS              RG SDGDGISIF S+KIW+DHCS+S+CTDGLIDA+MGST 
Sbjct: 202 YDCKPSAGFE---------KRGRSDGDGISIFGSQKIWVDHCSMSHCTDGLIDAVMGSTA 261

Query: 315 ITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPRCRHGYIHVVNND 374
           ITISN+YF+HHDEVMLLGHDD Y  D+GMQVTIAFNHFG+ LVQRMPRCR GYIHVVNND
Sbjct: 262 ITISNNYFTHHDEVMLLGHDDNYAPDTGMQVTIAFNHFGQGLVQRMPRCRRGYIHVVNND 321

Query: 375 FTAWEMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAET-EWAGWNWRTDGDILV 434
           FT W+MYAIGGS  PTINSQGNRY+AP DP+AKEVT+R+D+ +  EW+ WNWRT+GD++ 
Sbjct: 322 FTEWKMYAIGGSGNPTINSQGNRYSAPSDPSAKEVTKRVDSKDDGEWSNWNWRTEGDLME 381

Query: 435 NGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRYNAGQG----IVYPGF 494
           NGAFFV SG G+S+ Y KASSV+PK+ +L++QLT NAGV G PR + GQ       Y G 
Sbjct: 382 NGAFFVASGEGMSSMYSKASSVDPKAASLVDQLTRNAGVFGGPRDDQGQSGNSYSPYGGD 441

Query: 495 SGGNGGNGDEGYGGNTVINNSPIYENGGGNGNDDYYGMIFKAGGYRVLPILPSINLCTQI 546
            GG G +G    GG  V+  +    +     + + + MIF +      P  P + L   +
Sbjct: 442 GGGGGSSGGSSGGGMDVMGGTTRGSSSSSGDDSNVFQMIFGSDA----PSRPRLTLLFSL 491

[Close]

BLAST of Clc05G23620 vs. ExPASy Swiss-Prot
Match: Q944R1 (Probable pectate lyase 15 OS=Arabidopsis thaliana OX=3702 GN=At4g13710 PE=2 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 2.1e-153
Identity = 248/379 (65.44%), Postives = 301/379 (79.42%), Query Frame = 0


Query: 89  DPDSVADELQRTVNASVWRRQMLSVESKDQTFSCLTGNPIDDCWRCDPNWAANRQRLADC 148
           DPD VADE+ + V  S    Q  +   K   FSC TGNPIDDCWRCD NW  NR+RLADC
Sbjct: 88  DPDMVADEVAKLVQMS---EQNRTARRKLGFFSCGTGNPIDDCWRCDRNWHKNRKRLADC 147

Query: 149 GIGFGRDAMGGKGGKIYIVTDSSDLDPANPTPGTLRHAVIQFEPLWIIFSADMTIKLKYE 208
           GIGFGR+A+GG+ G+ YIVTD +D D  NP PGTLRHAVIQ EPLWI+F  DM I+LK E
Sbjct: 148 GIGFGRNAIGGRDGRFYIVTDPTDEDVVNPKPGTLRHAVIQEEPLWIVFKRDMVIELKQE 207

Query: 209 LIINSFKTIDGRGANVHITGGGCITIQYVSNVIIHNIHVHHCKPSGNANIRSTPTHVGHR 268
           LI+NSFKTID RG+NVHI  G CITIQ+++NVIIH +H+H CKP+GNA +RS+P+H G R
Sbjct: 208 LIMNSFKTIDARGSNVHIANGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHFGWR 267

Query: 269 GLSDGDGISIFSSRKIWIDHCSLSYCTDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDD 328
            ++DGD +SIF S  IWIDH SLS+C DGL+DA+MGST IT+SN++F+HH+EVMLLGH D
Sbjct: 268 TMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITVSNNHFTHHNEVMLLGHSD 327

Query: 329 RYVQDSGMQVTIAFNHFGEALVQRMPRCRHGYIHVVNNDFTAWEMYAIGGSAQPTINSQG 388
            Y +D  MQVTIA+NHFGE LVQRMPRCRHGY HVVNND+T WEMYAIGGSA+PTINSQG
Sbjct: 328 SYTKDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQG 387

Query: 389 NRYTAPVDPNAKEVTRRLDAAETEWAGWNWRTDGDILVNGAFFVPSGAGLSTQYGKASSV 448
           NRY AP+D  AKEVT+R++   +EW  WNWR++GD+L+NGAFF PSGAG S  YG+ASS+
Sbjct: 388 NRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEGDLLLNGAFFRPSGAGASASYGRASSL 447

Query: 449 EPKSVALINQLTMNAGVLG 468
             K  ++++ +T  AG LG
Sbjct: 448 AAKPSSMVDTITSTAGALG 463

[Close]

BLAST of Clc05G23620 vs. ExPASy Swiss-Prot
Match: Q9C5M8 (Probable pectate lyase 18 OS=Arabidopsis thaliana OX=3702 GN=At4g24780 PE=2 SV=2)

HSP 1 Score: 541.2 bits (1393), Expect = 1.4e-152
Identity = 247/379 (65.17%), Postives = 298/379 (78.63%), Query Frame = 0


Query: 88  PDPDSVADELQRTVNASVWRRQMLSVESKDQTFSCLTGNPIDDCWRCDPNWAANRQRLAD 147
           PDP+SV +E+ +++NASV  R+ L         SC TGNPIDDCWRCDP+W  +RQRLAD
Sbjct: 28  PDPESVVEEVHKSINASVAGRRKLGY------LSCTTGNPIDDCWRCDPHWEQHRQRLAD 87

Query: 148 CGIGFGRDAMGGKGGKIYIVTDSSDLDPANPTPGTLRHAVIQFEPLWIIFSADMTIKLKY 207
           C IGFG++A+GG+ G+IY+VTDS + +P +P PGTLRHAV+Q EPLWIIF  DMTI+LK 
Sbjct: 88  CAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLWIIFQRDMTIQLKE 147

Query: 208 ELIINSFKTIDGRGANVHITGGGCITIQYVSNVIIHNIHVHHCKPSGNANIRSTPTHVGH 267
           ELI+NSFKTIDGRGA+VHI+GG CITIQYV+N+IIH IH+H CK  GNA +RS+P H G 
Sbjct: 148 ELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGGNAMVRSSPRHFGW 207

Query: 268 RGLSDGDGISIFSSRKIWIDHCSLSYCTDGLIDAIMGSTGITISNSYFSHHDEVMLLGHD 327
           R +SDGDG+SIF    +W+DHCS S C DGLIDAIMGST IT+SN++ +HHD+VMLLGH 
Sbjct: 208 RTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNHMTHHDKVMLLGHS 267

Query: 328 DRYVQDSGMQVTIAFNHFGEALVQRMPRCRHGYIHVVNNDFTAWEMYAIGGSAQPTINSQ 387
           D Y +D  MQVTIAFNHFGE LVQRMPRCRHGY HVVNND+T WEMYAIGGSA PTINSQ
Sbjct: 268 DTYSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQ 327

Query: 388 GNRYTAPVDPNAKEVTRRLDAAETEWAGWNWRTDGDILVNGAFFVPSGAGLSTQYGKASS 447
           GNR+ AP    +KEVT+  DA E+EW  WNWR+ GD+L+NGAFF PSG   S+ Y KASS
Sbjct: 328 GNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAASSSYAKASS 387

Query: 448 VEPKSVALINQLTMNAGVL 467
           +  K  +L+  LT  +G L
Sbjct: 388 LGAKPSSLVGPLTSTSGAL 400

[Close]

BLAST of Clc05G23620 vs. ExPASy Swiss-Prot
Match: Q940Q1 (Probable pectate lyase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g04680 PE=2 SV=2)

HSP 1 Score: 537.3 bits (1383), Expect = 2.0e-151
Identity = 245/386 (63.47%), Postives = 296/386 (76.68%), Query Frame = 0


Query: 85  HQHPDPDSVADELQRTVNASVWRRQMLSVESKDQTFSCLTGNPIDDCWRCDPNWAANRQR 144
           H   +PD VADE+      SV      +   K   F+C TGNPIDDCWRCDPNW  NR+R
Sbjct: 43  HAVTNPDEVADEVLALTEMSVRNH---TERRKLGYFTCGTGNPIDDCWRCDPNWHKNRKR 102

Query: 145 LADCGIGFGRDAMGGKGGKIYIVTDSSDLDPANPTPGTLRHAVIQFEPLWIIFSADMTIK 204
           LADCGIGFGR+A+GG+ G+ Y+VTD  D +P NP PGTLRHAVIQ  PLWI+F  DM I+
Sbjct: 103 LADCGIGFGRNAIGGRDGRFYVVTDPRDDNPVNPRPGTLRHAVIQDRPLWIVFKRDMVIQ 162

Query: 205 LKYELIINSFKTIDGRGANVHITGGGCITIQYVSNVIIHNIHVHHCKPSGNANIRSTPTH 264
           LK ELI+NSFKTIDGRGANVHI  GGCITIQ+V+NVI+H +H+H CKP+GNA +RS+ TH
Sbjct: 163 LKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIVHGLHIHDCKPTGNAMVRSSETH 222

Query: 265 VGHRGLSDGDGISIFSSRKIWIDHCSLSYCTDGLIDAIMGSTGITISNSYFSHHDEVMLL 324
            G R ++DGD ISIF S  +WIDH SLS+C DGL+DA+MGST ITISN++ +HH+EVMLL
Sbjct: 223 FGWRTMADGDAISIFGSSHVWIDHNSLSHCADGLVDAVMGSTAITISNNHLTHHNEVMLL 282

Query: 325 GHDDRYVQDSGMQVTIAFNHFGEALVQRMPRCRHGYIHVVNNDFTAWEMYAIGGSAQPTI 384
           GH D Y++D  MQVTIA+NHFG  L+QRMPRCRHGY HVVNND+T WEMYAIGGSA PTI
Sbjct: 283 GHSDSYMRDKAMQVTIAYNHFGVGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTI 342

Query: 385 NSQGNRYTAPVDPNAKEVTRRLDAAETEWAGWNWRTDGDILVNGAFFVPSGAGLSTQYGK 444
           NSQGNRY AP +P AKEVT+R+D   + W GWNWR++GD+L NGA+F  SGA  S  Y +
Sbjct: 343 NSQGNRYAAPKNPFAKEVTKRVDTPASHWKGWNWRSEGDLLQNGAYFTSSGAAASGSYAR 402

Query: 445 ASSVEPKSVALINQLTMNAGVLGAPR 471
           ASS+  KS +L+  +T +AG L   R
Sbjct: 403 ASSLSAKSSSLVGHITSDAGALPCRR 425

[Close]

BLAST of Clc05G23620 vs. ExPASy TrEMBL
Match: A0A1S3BGT0 (Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103489433 PE=3 SV=1)

HSP 1 Score: 963.8 bits (2490), Expect = 3.2e-277
Identity = 470/511 (91.98%), Postives = 485/511 (94.91%), Query Frame = 0


Query: 56  MFPVLSILLIWMSASIFGV-ASGSFNLTLPHQHPDPDSVADELQRTVNASVWRRQMLSVE 115
           MFPVL+ L IWM ASI  V +S SFNLTLPHQHPDPDSVADELQRTVNAS+WRRQMLS+E
Sbjct: 1   MFPVLTTLFIWMFASISCVSSSSSFNLTLPHQHPDPDSVADELQRTVNASIWRRQMLSIE 60

Query: 116 SKDQTFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDLD 175
           SKDQTFSCLTGNPIDDCWRCDPNW+ANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDLD
Sbjct: 61  SKDQTFSCLTGNPIDDCWRCDPNWSANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDLD 120

Query: 176 PANPTPGTLRHAVIQFEPLWIIFSADMTIKLKYELIINSFKTIDGRGANVHITGGGCITI 235
           PANPTPGTLRHAVIQFEPLWIIFSADMTI+LKYELIINSFKTIDGRGANVHITGGGCITI
Sbjct: 121 PANPTPGTLRHAVIQFEPLWIIFSADMTIRLKYELIINSFKTIDGRGANVHITGGGCITI 180

Query: 236 QYVSNVIIHNIHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYC 295
           QYVSNVIIHN+HVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYC
Sbjct: 181 QYVSNVIIHNVHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYC 240

Query: 296 TDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMP 355
           TDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMP
Sbjct: 241 TDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMP 300

Query: 356 RCRHGYIHVVNNDFTAWEMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEWA 415
           RCRHGYIHVVNNDFTAW+MYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEWA
Sbjct: 301 RCRHGYIHVVNNDFTAWQMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEWA 360

Query: 416 GWNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRYNAG 475
           GWNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRY  G
Sbjct: 361 GWNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRYTGG 420

Query: 476 QGIVYPGFSGGNGGNGDEGYGGNTVINNSPIYENGGG-----NGNDDYYGMIFKAGGYRV 535
           +GIVYPGFSGGNGGNGDEGYGGNTVINNSPIYENGGG     NGNDDY+GMIFKA G R+
Sbjct: 421 EGIVYPGFSGGNGGNGDEGYGGNTVINNSPIYENGGGGNGNSNGNDDYFGMIFKANGNRI 480

Query: 536 LPILPSIN-LCT-QILLLLYIVTNYSGLFTL 559
            PI  S+N LCT  I+ L+YIV  YS LF+L
Sbjct: 481 FPIFSSVNYLCTLLIIFLMYIVAYYSALFSL 511

[Close]

BLAST of Clc05G23620 vs. ExPASy TrEMBL
Match: A0A0A0KRG9 (Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_5G622520 PE=3 SV=1)

HSP 1 Score: 959.5 bits (2479), Expect = 6.0e-276
Identity = 470/509 (92.34%), Postives = 484/509 (95.09%), Query Frame = 0


Query: 56  MFP-VLSILLIWM-SASIFGVASGSFNLTLPHQHPDPDSVADELQRTVNASVWRRQMLSV 115
           MFP VL+ L IWM ++SI  V+S SFNLTLPHQHPDPDSVADELQRTVNASVWRRQMLS+
Sbjct: 1   MFPRVLTTLFIWMVASSISCVSSSSFNLTLPHQHPDPDSVADELQRTVNASVWRRQMLSI 60

Query: 116 ESKDQTFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDL 175
           ESKDQTFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDL
Sbjct: 61  ESKDQTFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDL 120

Query: 176 DPANPTPGTLRHAVIQFEPLWIIFSADMTIKLKYELIINSFKTIDGRGANVHITGGGCIT 235
           DP NPTPGTLRHAVIQFEPLWIIFSADMTI+LKYELIINSFKTIDGRGANVHITGGGCIT
Sbjct: 121 DPTNPTPGTLRHAVIQFEPLWIIFSADMTIRLKYELIINSFKTIDGRGANVHITGGGCIT 180

Query: 236 IQYVSNVIIHNIHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSY 295
           IQYVSNVIIHN+HVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSY
Sbjct: 181 IQYVSNVIIHNVHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSY 240

Query: 296 CTDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRM 355
           CTDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRM
Sbjct: 241 CTDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRM 300

Query: 356 PRCRHGYIHVVNNDFTAWEMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEW 415
           PRCRHGYIHVVNNDFTAW+MYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEW
Sbjct: 301 PRCRHGYIHVVNNDFTAWQMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEW 360

Query: 416 AGWNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRYNA 475
           AGWNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRYN 
Sbjct: 361 AGWNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRYNG 420

Query: 476 GQGIVYPGFSGGNGGNGDEGYGGNTVINNSPIYENGG-------GNGNDDYYGMIFKAGG 535
           G+GIVYPGFSGG+GGNGDEGYGGNTVINNSPIYENGG       GNGNDDY+GMIFKA G
Sbjct: 421 GEGIVYPGFSGGSGGNGDEGYGGNTVINNSPIYENGGGSGGYGNGNGNDDYFGMIFKANG 480

Query: 536 YRVLPILPSIN-LCT-QILLLLYIVTNYS 554
           +R  PI  S+N LCT  I+ LLYIVTNYS
Sbjct: 481 HRTFPIFSSLNYLCTLLIIFLLYIVTNYS 509

[Close]

BLAST of Clc05G23620 vs. ExPASy TrEMBL
Match: A0A6J1CBN1 (Pectate lyase OS=Momordica charantia OX=3673 GN=LOC111010036 PE=3 SV=1)

HSP 1 Score: 939.1 bits (2426), Expect = 8.4e-270
Identity = 456/504 (90.48%), Postives = 478/504 (94.84%), Query Frame = 0


Query: 56  MFPVLSILLIWMSASIFGVASGSFNLTLPHQHPDPDSVADELQRTVNASVWRRQMLSVES 115
           MFPVLSILLIWMS S+F VAS SFNLTLPHQHPDPDSVADELQR VNAS+ RRQMLS+ES
Sbjct: 1   MFPVLSILLIWMSGSVFNVASASFNLTLPHQHPDPDSVADELQRRVNASISRRQMLSLES 60

Query: 116 KDQTFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDLDP 175
           KD+ FSCL+GNPIDDCWRCDPNWAANRQRLADCGIGFGRDA+GGKGGKIYIV+DSSD DP
Sbjct: 61  KDEAFSCLSGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAVGGKGGKIYIVSDSSDSDP 120

Query: 176 ANPTPGTLRHAVIQFEPLWIIFSADMTIKLKYELIINSFKTIDGRGANVHITGGGCITIQ 235
           ANPTPGTLRHAVIQFEPLWIIFSADMTI+LKYELI+NSFKTIDGRGANVHITGGGCITIQ
Sbjct: 121 ANPTPGTLRHAVIQFEPLWIIFSADMTIRLKYELIVNSFKTIDGRGANVHITGGGCITIQ 180

Query: 236 YVSNVIIHNIHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCT 295
           YVSN+IIHNIHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCT
Sbjct: 181 YVSNIIIHNIHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCT 240

Query: 296 DGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPR 355
           DGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPR
Sbjct: 241 DGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPR 300

Query: 356 CRHGYIHVVNNDFTAWEMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEWAG 415
           CRHGYIHVVNNDFTAWEMYAIGGSA+PTINSQGNRYTAP+DPNAKEVTRRLDAAET+W+ 
Sbjct: 301 CRHGYIHVVNNDFTAWEMYAIGGSARPTINSQGNRYTAPLDPNAKEVTRRLDAAETDWSA 360

Query: 416 WNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRYNAGQ 475
           WNWRTDGDILVNGAFFVPSGAG+STQYGKASSVEPKSVALINQLTMNAGVL APRYN+GQ
Sbjct: 361 WNWRTDGDILVNGAFFVPSGAGVSTQYGKASSVEPKSVALINQLTMNAGVLAAPRYNSGQ 420

Query: 476 GIVYPGFSGGNGGNGDEGYGGNTVINNSPIYENGGGNGNDDYYGMIFKAGGYRVLPILP- 535
           GIVYPGFSG N G+G   YGGNTVINNSPI  NGGG G DD+YGMIFKAGGYRV  + P 
Sbjct: 421 GIVYPGFSGNNDGSGIGEYGGNTVINNSPIGGNGGG-GEDDFYGMIFKAGGYRVSSLPPL 480

Query: 536 SINLCTQILLLLYIVTNYSGLFTL 559
           SINL  QI+++LYIV NY GLFTL
Sbjct: 481 SINLWIQIVIILYIVMNYCGLFTL 503

[Close]

BLAST of Clc05G23620 vs. ExPASy TrEMBL
Match: A0A6J1G261 (Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111449983 PE=3 SV=1)

HSP 1 Score: 920.2 bits (2377), Expect = 4.0e-264
Identity = 451/504 (89.48%), Postives = 468/504 (92.86%), Query Frame = 0


Query: 56  MFPVLSILLIWMSASIFGVASGSFNLTLPHQHPDPDSVADELQRTVNASVWRRQMLSVES 115
           MFPVLSILLIWMS   F VAS SFNLTLPHQHPDPDSVADELQRTVNAS+ RR+ LS+ES
Sbjct: 1   MFPVLSILLIWMSGLFFLVASASFNLTLPHQHPDPDSVADELQRTVNASISRRKALSIES 60

Query: 116 KDQTFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDLDP 175
           KDQ FSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSD +P
Sbjct: 61  KDQAFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDSNP 120

Query: 176 ANPTPGTLRHAVIQFEPLWIIFSADMTIKLKYELIINSFKTIDGRGANVHITGGGCITIQ 235
            NPTPGTLRHAVIQFEPLWIIFSADMTIKLKYELIIN+FKTIDGRGANVHITGGGCITIQ
Sbjct: 121 ENPTPGTLRHAVIQFEPLWIIFSADMTIKLKYELIINNFKTIDGRGANVHITGGGCITIQ 180

Query: 236 YVSNVIIHNIHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCT 295
           YVSN+IIHNIHVHHC PSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCT
Sbjct: 181 YVSNIIIHNIHVHHCVPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCT 240

Query: 296 DGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPR 355
           DGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPR
Sbjct: 241 DGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPR 300

Query: 356 CRHGYIHVVNNDFTAWEMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEWAG 415
           CRHGYIHVVNNDFTAWEMYAIGGSA+PTINSQGNRY APV+PNAKEVTRRLDAAETEW  
Sbjct: 301 CRHGYIHVVNNDFTAWEMYAIGGSARPTINSQGNRYVAPVNPNAKEVTRRLDAAETEWTA 360

Query: 416 WNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRYNAGQ 475
           WNWRTDGDILVNGAFFVPSGAGLSTQYGKASS EPKSVALINQLTMNAGVLGAPRY+ G+
Sbjct: 361 WNWRTDGDILVNGAFFVPSGAGLSTQYGKASSTEPKSVALINQLTMNAGVLGAPRYSNGE 420

Query: 476 GIVYPGFSGGNGGNGDEGYGGNTVINNSPIYENGGGNGNDDYYGMIFKAGGYRVL-PILP 535
           GIVYPGFSG  GG G+ GYGG TVINNSP+Y N GG G DD+YGMIFK GG RV  P  P
Sbjct: 421 GIVYPGFSGSTGG-GNGGYGGGTVINNSPMYGNSGG-GEDDFYGMIFKGGGNRVSPPWSP 480

Query: 536 SINLCTQILLLLYIVTNYSGLFTL 559
            + LC QIL++LY+VTN SGL TL
Sbjct: 481 PMILCVQILVVLYVVTNNSGLLTL 502

[Close]

BLAST of Clc05G23620 vs. ExPASy TrEMBL
Match: A0A6J1HTT6 (Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111466524 PE=3 SV=1)

HSP 1 Score: 915.6 bits (2365), Expect = 1.0e-262
Identity = 451/504 (89.48%), Postives = 466/504 (92.46%), Query Frame = 0


Query: 56  MFPVLSILLIWMSASIFGVASGSFNLTLPHQHPDPDSVADELQRTVNASVWRRQMLSVES 115
           MFPVLSILLIWMS   F VA  SFNLTLPHQHPDPDSVADELQRTVNAS+ RR+ LS+ES
Sbjct: 1   MFPVLSILLIWMSGLFFLVALASFNLTLPHQHPDPDSVADELQRTVNASISRRKALSIES 60

Query: 116 KDQTFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDLDP 175
           KDQ FSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSD +P
Sbjct: 61  KDQAFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDSNP 120

Query: 176 ANPTPGTLRHAVIQFEPLWIIFSADMTIKLKYELIINSFKTIDGRGANVHITGGGCITIQ 235
            NPTPGTLRHAVIQFEPLWIIFSADMTIKLKYELIINSFKTIDGRGANVHITGGGCITIQ
Sbjct: 121 ENPTPGTLRHAVIQFEPLWIIFSADMTIKLKYELIINSFKTIDGRGANVHITGGGCITIQ 180

Query: 236 YVSNVIIHNIHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCT 295
           YVSN+IIHNIHVHHC PSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCT
Sbjct: 181 YVSNIIIHNIHVHHCVPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCT 240

Query: 296 DGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPR 355
           DGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPR
Sbjct: 241 DGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPR 300

Query: 356 CRHGYIHVVNNDFTAWEMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEWAG 415
           CRHGYIHVVNNDFTAWEMYAIGGSA+PTINSQGNRY APV+PNAKEVTRRLDAAETEW  
Sbjct: 301 CRHGYIHVVNNDFTAWEMYAIGGSARPTINSQGNRYVAPVNPNAKEVTRRLDAAETEWTA 360

Query: 416 WNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRYNAGQ 475
           WNWRTDGDILVNGAFFVPSGAGLSTQYGKASS EPKSVALINQLTMNAGVLGAPR++ G+
Sbjct: 361 WNWRTDGDILVNGAFFVPSGAGLSTQYGKASSTEPKSVALINQLTMNAGVLGAPRFSNGE 420

Query: 476 GIVYPGFSGGNGGNGDEGYGGNTVINNSPIYENGGGNGNDDYYGMIFKAGGYRVL-PILP 535
           GIVYPGFSG NGG G+ GYGG TVINNSP+Y N GG G DD+YGMIFK  G RV  P  P
Sbjct: 421 GIVYPGFSGSNGG-GNGGYGGGTVINNSPMYGNSGG-GEDDFYGMIFKGDGNRVSPPWSP 480

Query: 536 SINLCTQILLLLYIVTNYSGLFTL 559
            + LC QIL+ LYIVTN SGL TL
Sbjct: 481 PMFLCVQILVGLYIVTNNSGLLTL 502

[Close]

BLAST of Clc05G23620 vs. TAIR 10
Match: AT5G04310.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 649.4 bits (1674), Expect = 2.6e-186
Identity = 315/473 (66.60%), Postives = 371/473 (78.44%), Query Frame = 0


Query: 62  ILLIW----MSASIFGVASGS----FNLTLPHQHPDPDSVADELQRTVNASVWRRQMLSV 121
           I +IW    +S S  G AS +    FNL+LPHQHP P+ V   +QR +N S+ RRQ+L+ 
Sbjct: 17  ICIIWFCLLVSLSHHGRASSTSASIFNLSLPHQHPFPEHVVLNVQRKLNDSLSRRQLLTY 76

Query: 122 ESKDQTF------SCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIV 181
           +  D T       SC+TGNPIDDCWRCDPNW+ANRQRLADC IGFG+  +GGKGG+ Y+V
Sbjct: 77  QQDDGTTASSPIPSCITGNPIDDCWRCDPNWSANRQRLADCSIGFGQGTLGGKGGQFYLV 136

Query: 182 TDSSDLDPANPTPGTLRHAVIQFEPLWIIFSADMTIKLKYELIINSFKTIDGRGANVHIT 241
           TDSSD D ANP PGTLRHAVIQ EPLWIIFS+DM IKLK+ELII S+KTIDGRG N+ IT
Sbjct: 137 TDSSDNDAANPIPGTLRHAVIQPEPLWIIFSSDMGIKLKHELIIGSYKTIDGRGTNIQIT 196

Query: 242 GGGCITIQYVSNVIIHNIHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWID 301
           G GC+TIQ VS+VIIHN+H+HHCKPSGN  + S+PTHVG RG+SDGDGIS+ +S  IW+D
Sbjct: 197 GHGCLTIQQVSHVIIHNVHIHHCKPSGNTLVASSPTHVGFRGVSDGDGISVSASHHIWVD 256

Query: 302 HCSLSYCTDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGE 361
           HCSL YC DGLID I+ ST +TISN+YFSHHDEVMLLGHDDRY  D GMQVTIAFNHFGE
Sbjct: 257 HCSLGYCADGLIDVILASTAVTISNNYFSHHDEVMLLGHDDRYTADKGMQVTIAFNHFGE 316

Query: 362 ALVQRMPRCRHGYIHVVNNDFTAWEMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLD 421
            LVQRMPRCRHGYIHVVNNDFTAWEMYAIGGSA PTINSQGNRYTAP+DPNAKEVT+R+D
Sbjct: 317 GLVQRMPRCRHGYIHVVNNDFTAWEMYAIGGSASPTINSQGNRYTAPIDPNAKEVTKRVD 376

Query: 422 AAETEWAGWNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLG 481
           + E  W+GWNWRT+GD++VNGAFFVPSG G+S  Y +A+SV+PK+ A+I+QLT+NAGV G
Sbjct: 377 SNEKHWSGWNWRTEGDVMVNGAFFVPSGDGVSPAYARATSVQPKAAAIIDQLTVNAGVFG 436

Query: 482 APRYNAGQGIVYPGFSGGNGGNGDEGYGGNTVINNSPIYENGGGNGNDDYYGM 521
            P    GQG  +PG + G GG    GY       + P    GGG+G+D   G+
Sbjct: 437 DPSGRNGQGGSFPGITNG-GGTITRGYS-----KSGPA---GGGSGSDSDDGL 480

[Close]

BLAST of Clc05G23620 vs. TAIR 10
Match: AT3G53190.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 590.1 bits (1520), Expect = 1.8e-168
Identity = 288/450 (64.00%), Postives = 338/450 (75.11%), Query Frame = 0


Query: 49  FLIVPLRMFPVLSILLIWMSASIFGVASGSFNLTLPHQHPDPDSVADELQRTVNASVWRR 108
           FL+VP  +F +L+  L                L +P  HPDP+ VA ++Q  VNAS+ RR
Sbjct: 15  FLLVPQMVFSMLNRTL----------------LLIP--HPDPELVAYQVQWKVNASITRR 74

Query: 109 QMLSVESKDQTFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVT 168
           Q L    +  +  C+TGNPIDDCW+CDPNW  NRQ LADCGIGFG+ A+GGKGG+ Y VT
Sbjct: 75  QALDTTDQAGSTPCITGNPIDDCWKCDPNWPNNRQGLADCGIGFGQYALGGKGGQFYFVT 134

Query: 169 DSSDLDPANPTPGTLRHAVIQFEPLWIIFSADMTIKLKYELIINSFKTIDGRGANVHITG 228
           DSSD D  NP PGTLR+ VIQ EPLWI+F ++M IKLK ELI NS+KT+DGRGANVHI G
Sbjct: 135 DSSDDDAVNPKPGTLRYGVIQEEPLWIVFPSNMMIKLKQELIFNSYKTLDGRGANVHIVG 194

Query: 229 GGCITIQYVSNVIIHNIHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDH 288
           GGCIT+QYVSN+IIHNIH+HHC  SGN N+RS+PTH G R  SDGDGISIF S+ IWIDH
Sbjct: 195 GGCITLQYVSNIIIHNIHIHHCYQSGNTNVRSSPTHYGFRTKSDGDGISIFGSKDIWIDH 254

Query: 289 CSLSYCTDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEA 348
           CSLS C DGLIDA+MGSTGITISN++FSHH+EVMLLGH D Y  DSGMQVTIAFNHFGE 
Sbjct: 255 CSLSRCKDGLIDAVMGSTGITISNNFFSHHNEVMLLGHSDHYEPDSGMQVTIAFNHFGEK 314

Query: 349 LVQRMPRCRHGYIHVVNNDFTAWEMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDA 408
           L+QRMPRCR GYIHVVNNDFT WEMYAIGGS  PTINSQGNRYTAP +P AKEVT+R++ 
Sbjct: 315 LIQRMPRCRRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPTNPFAKEVTKRVET 374

Query: 409 AETEWAGWNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGA 468
            + +W GWNWR++GDILVNGAFFV SG G   +Y KA SVEPKS + I Q+T ++GVLG 
Sbjct: 375 PDGDWKGWNWRSEGDILVNGAFFVASGEGAEMRYEKAYSVEPKSASFITQITFHSGVLGV 434

Query: 469 PRYNAGQGIVYPGFSGGNGGNGDEGYGGNT 499
              N   G+     +G  G +G + Y   T
Sbjct: 435 GGRNNNLGMWTT--TGSEGTSGLDSYNDYT 444

[Close]

BLAST of Clc05G23620 vs. TAIR 10
Match: AT3G54920.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 589.7 bits (1519), Expect = 2.4e-168
Identity = 289/483 (59.83%), Postives = 355/483 (73.50%), Query Frame = 0


Query: 75  ASGSFNLTLPHQHPDPDSVADELQRTVNASVWRRQM------LSVESKDQTFSCLTGNPI 134
           A+   NLTLPHQHP PDSVA  + R+VN S+ RRQ+       S  S   + SC TGNPI
Sbjct: 22  ATKPLNLTLPHQHPSPDSVALHVIRSVNESLARRQLSSPSSSSSSSSSSSSSSCRTGNPI 81

Query: 135 DDCWRC-DPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDLDPANPTPGTLRHAV 194
           DDCWRC D +W+ NRQRLADC IGFG   +GGK GKIY+VTDSSD +P NPTPGTLR+ V
Sbjct: 82  DDCWRCSDADWSTNRQRLADCSIGFGHGTLGGKNGKIYVVTDSSDNNPTNPTPGTLRYGV 141

Query: 195 IQFEPLWIIFSADMTIKLKYELIINSFKTIDGRGANVHITGGGCITIQYVSNVIIHNIHV 254
           IQ EPLWI+FS++M I+LK ELIINS+KT+DGRG+ VHITG GC+T+QYV ++IIHN+H+
Sbjct: 142 IQEEPLWIVFSSNMLIRLKQELIINSYKTLDGRGSAVHITGNGCLTLQYVQHIIIHNLHI 201

Query: 255 HHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCTDGLIDAIMGSTG 314
           + CKPS              RG SDGDGISIF S+KIW+DHCS+S+CTDGLIDA+MGST 
Sbjct: 202 YDCKPSAGFE---------KRGRSDGDGISIFGSQKIWVDHCSMSHCTDGLIDAVMGSTA 261

Query: 315 ITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPRCRHGYIHVVNND 374
           ITISN+YF+HHDEVMLLGHDD Y  D+GMQVTIAFNHFG+ LVQRMPRCR GYIHVVNND
Sbjct: 262 ITISNNYFTHHDEVMLLGHDDNYAPDTGMQVTIAFNHFGQGLVQRMPRCRRGYIHVVNND 321

Query: 375 FTAWEMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAET-EWAGWNWRTDGDILV 434
           FT W+MYAIGGS  PTINSQGNRY+AP DP+AKEVT+R+D+ +  EW+ WNWRT+GD++ 
Sbjct: 322 FTEWKMYAIGGSGNPTINSQGNRYSAPSDPSAKEVTKRVDSKDDGEWSNWNWRTEGDLME 381

Query: 435 NGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRYNAGQG----IVYPGF 494
           NGAFFV SG G+S+ Y KASSV+PK+ +L++QLT NAGV G PR + GQ       Y G 
Sbjct: 382 NGAFFVASGEGMSSMYSKASSVDPKAASLVDQLTRNAGVFGGPRDDQGQSGNSYSPYGGD 441

Query: 495 SGGNGGNGDEGYGGNTVINNSPIYENGGGNGNDDYYGMIFKAGGYRVLPILPSINLCTQI 546
            GG G +G    GG  V+  +    +     + + + MIF +      P  P + L   +
Sbjct: 442 GGGGGSSGGSSGGGMDVMGGTTRGSSSSSGDDSNVFQMIFGSDA----PSRPRLTLLFSL 491

[Close]

BLAST of Clc05G23620 vs. TAIR 10
Match: AT4G13710.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 543.9 bits (1400), Expect = 1.5e-154
Identity = 248/379 (65.44%), Postives = 301/379 (79.42%), Query Frame = 0


Query: 89  DPDSVADELQRTVNASVWRRQMLSVESKDQTFSCLTGNPIDDCWRCDPNWAANRQRLADC 148
           DPD VADE+ + V  S    Q  +   K   FSC TGNPIDDCWRCD NW  NR+RLADC
Sbjct: 88  DPDMVADEVAKLVQMS---EQNRTARRKLGFFSCGTGNPIDDCWRCDRNWHKNRKRLADC 147

Query: 149 GIGFGRDAMGGKGGKIYIVTDSSDLDPANPTPGTLRHAVIQFEPLWIIFSADMTIKLKYE 208
           GIGFGR+A+GG+ G+ YIVTD +D D  NP PGTLRHAVIQ EPLWI+F  DM I+LK E
Sbjct: 148 GIGFGRNAIGGRDGRFYIVTDPTDEDVVNPKPGTLRHAVIQEEPLWIVFKRDMVIELKQE 207

Query: 209 LIINSFKTIDGRGANVHITGGGCITIQYVSNVIIHNIHVHHCKPSGNANIRSTPTHVGHR 268
           LI+NSFKTID RG+NVHI  G CITIQ+++NVIIH +H+H CKP+GNA +RS+P+H G R
Sbjct: 208 LIMNSFKTIDARGSNVHIANGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHFGWR 267

Query: 269 GLSDGDGISIFSSRKIWIDHCSLSYCTDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDD 328
            ++DGD +SIF S  IWIDH SLS+C DGL+DA+MGST IT+SN++F+HH+EVMLLGH D
Sbjct: 268 TMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITVSNNHFTHHNEVMLLGHSD 327

Query: 329 RYVQDSGMQVTIAFNHFGEALVQRMPRCRHGYIHVVNNDFTAWEMYAIGGSAQPTINSQG 388
            Y +D  MQVTIA+NHFGE LVQRMPRCRHGY HVVNND+T WEMYAIGGSA+PTINSQG
Sbjct: 328 SYTKDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQG 387

Query: 389 NRYTAPVDPNAKEVTRRLDAAETEWAGWNWRTDGDILVNGAFFVPSGAGLSTQYGKASSV 448
           NRY AP+D  AKEVT+R++   +EW  WNWR++GD+L+NGAFF PSGAG S  YG+ASS+
Sbjct: 388 NRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEGDLLLNGAFFRPSGAGASASYGRASSL 447

Query: 449 EPKSVALINQLTMNAGVLG 468
             K  ++++ +T  AG LG
Sbjct: 448 AAKPSSMVDTITSTAGALG 463

[Close]

BLAST of Clc05G23620 vs. TAIR 10
Match: AT4G13710.2 (Pectin lyase-like superfamily protein )

HSP 1 Score: 543.9 bits (1400), Expect = 1.5e-154
Identity = 248/379 (65.44%), Postives = 301/379 (79.42%), Query Frame = 0


Query: 89  DPDSVADELQRTVNASVWRRQMLSVESKDQTFSCLTGNPIDDCWRCDPNWAANRQRLADC 148
           DPD VADE+ + V  S    Q  +   K   FSC TGNPIDDCWRCD NW  NR+RLADC
Sbjct: 69  DPDMVADEVAKLVQMS---EQNRTARRKLGFFSCGTGNPIDDCWRCDRNWHKNRKRLADC 128

Query: 149 GIGFGRDAMGGKGGKIYIVTDSSDLDPANPTPGTLRHAVIQFEPLWIIFSADMTIKLKYE 208
           GIGFGR+A+GG+ G+ YIVTD +D D  NP PGTLRHAVIQ EPLWI+F  DM I+LK E
Sbjct: 129 GIGFGRNAIGGRDGRFYIVTDPTDEDVVNPKPGTLRHAVIQEEPLWIVFKRDMVIELKQE 188

Query: 209 LIINSFKTIDGRGANVHITGGGCITIQYVSNVIIHNIHVHHCKPSGNANIRSTPTHVGHR 268
           LI+NSFKTID RG+NVHI  G CITIQ+++NVIIH +H+H CKP+GNA +RS+P+H G R
Sbjct: 189 LIMNSFKTIDARGSNVHIANGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHFGWR 248

Query: 269 GLSDGDGISIFSSRKIWIDHCSLSYCTDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDD 328
            ++DGD +SIF S  IWIDH SLS+C DGL+DA+MGST IT+SN++F+HH+EVMLLGH D
Sbjct: 249 TMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITVSNNHFTHHNEVMLLGHSD 308

Query: 329 RYVQDSGMQVTIAFNHFGEALVQRMPRCRHGYIHVVNNDFTAWEMYAIGGSAQPTINSQG 388
            Y +D  MQVTIA+NHFGE LVQRMPRCRHGY HVVNND+T WEMYAIGGSA+PTINSQG
Sbjct: 309 SYTKDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQG 368

Query: 389 NRYTAPVDPNAKEVTRRLDAAETEWAGWNWRTDGDILVNGAFFVPSGAGLSTQYGKASSV 448
           NRY AP+D  AKEVT+R++   +EW  WNWR++GD+L+NGAFF PSGAG S  YG+ASS+
Sbjct: 369 NRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEGDLLLNGAFFRPSGAGASASYGRASSL 428

Query: 449 EPKSVALINQLTMNAGVLG 468
             K  ++++ +T  AG LG
Sbjct: 429 AAKPSSMVDTITSTAGALG 444

The following BLAST results are available for this feature:

BLAST of Clc05G23620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893100.1	1.9e-292	96.42	probable pectate lyase 18 isoform X1 [Benincasa hispida] >XP_038893101.1 probabl...	[more]
XP_008446817.1	6.6e-277	91.98	PREDICTED: probable pectate lyase 18 [Cucumis melo]	[more]
XP_011655861.1	1.2e-275	92.34	probable pectate lyase 18 [Cucumis sativus] >KGN52235.1 hypothetical protein Csa...	[more]
XP_022138994.1	1.7e-269	90.48	probable pectate lyase 18 [Momordica charantia]	[more]
XP_023543015.1	2.9e-264	89.88	probable pectate lyase 18 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc05G23620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCP2	2.6e-167	64.00	Probable pectate lyase 12 OS=Arabidopsis thaliana OX=3702 GN=At3g53190 PE=2 SV=2	[more]
Q93Z04	3.4e-167	59.83	Probable pectate lyase 13 OS=Arabidopsis thaliana OX=3702 GN=PMR6 PE=1 SV=1	[more]
Q944R1	2.1e-153	65.44	Probable pectate lyase 15 OS=Arabidopsis thaliana OX=3702 GN=At4g13710 PE=2 SV=1	[more]
Q9C5M8	1.4e-152	65.17	Probable pectate lyase 18 OS=Arabidopsis thaliana OX=3702 GN=At4g24780 PE=2 SV=2	[more]
Q940Q1	2.0e-151	63.47	Probable pectate lyase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g04680 PE=2 SV=2	[more]

BLAST of Clc05G23620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BGT0	3.2e-277	91.98	Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103489433 PE=3 SV=1	[more]
A0A0A0KRG9	6.0e-276	92.34	Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_5G622520 PE=3 SV=1	[more]
A0A6J1CBN1	8.4e-270	90.48	Pectate lyase OS=Momordica charantia OX=3673 GN=LOC111010036 PE=3 SV=1	[more]
A0A6J1G261	4.0e-264	89.48	Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111449983 PE=3 SV=1	[more]
A0A6J1HTT6	1.0e-262	89.48	Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111466524 PE=3 SV=1	[more]

BLAST of Clc05G23620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04310.1	2.6e-186	66.60	Pectin lyase-like superfamily protein	[more]
AT3G53190.1	1.8e-168	64.00	Pectin lyase-like superfamily protein	[more]
AT3G54920.1	2.4e-168	59.83	Pectin lyase-like superfamily protein	[more]
AT4G13710.1	1.5e-154	65.44	Pectin lyase-like superfamily protein	[more]
AT4G13710.2	1.5e-154	65.44	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 148..165 score: 57.67 coord: 208..224 score: 73.95 coord: 352..371 score: 68.57 coord: 172..197 score: 64.47 coord: 416..440 score: 51.24 coord: 374..393 score: 73.57 coord: 445..468 score: 29.96 coord: 272..293 score: 63.2
IPR002022	Pectate lyase	SMART	SM00656	amb_all	coord: 200..397 e-value: 1.5E-95 score: 333.4
IPR002022	Pectate lyase	PFAM	PF00544	Pectate_lyase_4	coord: 208..389 e-value: 2.9E-23 score: 82.6
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 125..467 e-value: 6.0E-117 score: 392.4
IPR045032	Pectin lyase family	PANTHER	PTHR31683	PECTATE LYASE 18-RELATED	coord: 63..484
None	No IPR available	PANTHER	PTHR31683:SF122	PECTATE LYASE	coord: 63..484
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 116..445

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G23620.2	Clc05G23620.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045490	pectin catabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0030570	pectate lyase activity