Clc05G23380 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G23380
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	DNL-type domain-containing protein
Location	ClcChr05: 31452560 .. 31455559 (+)
RNA-Seq Expression	Clc05G23380
Synteny	Clc05G23380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTCTTTCTTTAAATCAAAGGATGACTAGGCTTAGATTAGGGTATTTATTATTTAGTGCGAAAATATAAAAGATGTGGAACTTGCTGAGGAATCCAGCCGTTCTTGTATACGTACACCTGCCGATGGAAATCCGAGTATTTTAACTCGGACCTCCGTTGGCAGTCTTCCATGGCGACGAGGCGAATTCTTTCTCTTGCTTTCCGTTATCGGTTGCAGACCTCTCTTCCACACGGTGGGCTTCCATTTCTCTTCTCTCTGTAAAACCCCCCAATAGTAGACCATTTTGCTTACTCCTATTTATATGTTTTTGCCTGATTTGCTCTGGTGCTTTGCTTGCAACTTTAATCGTTCCGGAATCATTGGGGTCTGTAGTTTGTTTTGACTCCCTTTCCATTAATGGGCGATCCGGGTTTTCTCCGTTCATCGGAAAATCTTGTGTTGAACTGGTAAAATTAGCGTATTCTATTAGCAATTTAATTCCCGACTTCCCAAAGAGAATTAAGGAAAAATTATGTGTATCTATGATCTAATTGGTTGAATATGCTTGAAGAGTTCTTTCTATTGTTTTGTATGATTTCTTTCTGATATATGAAATAGGCCCAGTTCTTTGGTTAAAATCACCACTTAACCTAAAAGTTCTACCGGATGGATAAGAGTAAATTTAATTTTTATATCAACACTTACATTTAGTTAGAGTGATCTCTGGGAAAAAAATTCTGAAGGGATTGGGGGCCTTGAAGAAAAAATTTGTGCCTGCCCCTGTATTTCGTATTAATGCTTCAGTTTAATTGGGGTTTGAACATACAAATTTAGTAAGTTATTGACTAACTCTGTAATAGGCAATTTGAGACTTGGCTAATATCACTTTAGTAGTGAAACGAAGCAACTTGTGAAGCTTCAACTGCTCTTACATTAAAAAGTTTGAGGAATGTTTCTTGTAGCTTTACAGAAATTAATATTCTTGGATTCATTTCATCATCTTGTGTCTGGTTCCTGATTGTTTCTTTCGTTTGAATGTATTTAAAACTCGGTCGAACTTCCCAGCTGATAGCCTTTTCTTTCTGTTTATTATTTTTTTTTTTTCAAAACCTTTCATTTATAGTCATTGGCGTAGTGTCTTTCTATTTCTATACGACGGACGGATCTCTTCCCCCAAGTTGACTCTCTAGTTCAACAATGAGATCCTTCAGTATCTTAAAAGTATTTATTTTAACATATATTTCTCTTTTGTATGATTTCTTTTGCTCAAACTGCTGAAAAGAACAATTTTGATGGCAGAAAGCACTTGCCGAATTCACCCGATTGCAAATTCATGGTTCTTGACTGGGCACAGATTTTCAACAAGAGGAAATCAGACCGTGGCAAATCCAACAATAGCTGAGGATTCTAAAGACAATGAAGACAATAAGTTGAGGCCCATTTCTGAATTGGGTGATCCTCTTCATGAAAACAAGGATGATACTTCTGCTGTGAAGTACTCTGTTCTCTCCAATTTAAAATCATCCCCTAGGCATGACCTTGCCATGATCTTCACTTGCAAAGTCTGCGAGACAAGATCAGTCAAGACTGTTTGCCGTGAATCATACGAGAAGGGTGTGGTAGTGGCACGTTGTGGTGGATGCAGCAATTTACACCTGATTGCAGACCATCTTGGTTGGTTCGGCGAGCCAGGTAGTGTCGAAGACTTCCTGGCTGCTCGTGGCGAGGAAGTCCGCAAAGGTTCTCTTGATTCTCTAAGCTTGACCCTTGAAGATTTGGCTGGAAAGAAATCCTGAAATTTTGGAACGTCATCTATCTTAAGAGCAAATAGTTACTTAACTCGGGTTTCGGTTTCCCTGGTTTGAAATTAGAAGCTACTTCATATCTGGATATTTGGTGTTCGGATAAAGATGTTTCAAGGTCTGTGGTTCCAGTTGCTGGCTATCCTTGATTTGAGGTGAAGTTTATAAGAAACAACACCTGCTGGTCGAAATTTAGAAATTTGGGGCTGCCTGAAGTACATGCTCTCTCTTAAGGTGTGTTCTCATTTACACAAACCAATATTATTACTCTTCTTCAATTTCCCTTTTGTATGGCTCTGTTGATCATTACATTTGACAAAATGAACTGAACTTCTTCATGCACAACCAAATTTTGGCACAAGAAAAAGGAAGAAGCATCAATTAACTGTTCATCTTTTTGTTTTTCTGCTAATCTTTTTTCACCTGCATAGTGCAATCACCACTAAATTGTTACCCAGCAGGGTATACATTTTTTGTTTTTGTTTTTTAAAATTTAGCATGTTCAAATGTTTTTTTAGAGGAGAAAATCATAGTAAGGAAATGGTTGGGAGCATACTGCATACTGAAATGTAGTATAAAAAATTGAAGATTTGGTATTCTTATCATAACTTCTGAATGCCATATTGATTAACTTTAGGTTACAAATGTTCAACAAATTTCTACTTTTGGGTTACATGCTATTTTATTGGTGATTTCTTCGAAAGCAAATTAATTTTTATTAGCATTCCTTTTATAATTTTTTTGGAAATGTTGTTTTTCTTTTTTCATAAAAATTAGGGTTTGTTTTAAATGGCAAAACTGTACATGTTTACAAATATAGCAAAATGTCACTATTTATTAGTTATAGACAATGATTATCATATTTATCATATTTGTAAATATTTTGGTTTATTTGGCTATATTTGAAACCATCCCTAAAAATTATTATTATTATTTAACGAATTTCAATTAAAAAGTTTTTCCACGTACTAAAACGTTTGAAATTATAAAATCAAAATGAAAAGTAATTAAGCTGATTTTAACTTTTTTTAACTTTATGATAGATTCTCCTTTTTGAATTTTCAGAACTCAATCAAACAATTCGGATGATCATCAATGGGCTACAGATGACTGCACTTTGAATATCCATTATTCTATGAGCAATTTGTTGAACATTTGTAGTAAACGTAATAGAAAACATGTACCTATCAATTTTAGTATGAAGCATGTTTTTTTTT

mRNA sequence

GTTTCTTTCTTTAAATCAAAGGATGACTAGGCTTAGATTAGGGTATTTATTATTTAGTGCGAAAATATAAAAGATGTGGAACTTGCTGAGGAATCCAGCCGTTCTTGTATACGTACACCTGCCGATGGAAATCCGAGTATTTTAACTCGGACCTCCGTTGGCAGTCTTCCATGGCGACGAGGCGAATTCTTTCTCTTGCTTTCCGTTATCGGTTGCAGACCTCTCTTCCACACGAAAGCACTTGCCGAATTCACCCGATTGCAAATTCATGGTTCTTGACTGGGCACAGATTTTCAACAAGAGGAAATCAGACCGTGGCAAATCCAACAATAGCTGAGGATTCTAAAGACAATGAAGACAATAAGTTGAGGCCCATTTCTGAATTGGGTGATCCTCTTCATGAAAACAAGGATGATACTTCTGCTGTGAAGTACTCTGTTCTCTCCAATTTAAAATCATCCCCTAGGCATGACCTTGCCATGATCTTCACTTGCAAAGTCTGCGAGACAAGATCAGTCAAGACTGTTTGCCGTGAATCATACGAGAAGGGTGTGGTAGTGGCACGTTGTGGTGGATGCAGCAATTTACACCTGATTGCAGACCATCTTGGTTGGTTCGGCGAGCCAGGTAGTGTCGAAGACTTCCTGGCTGCTCGTGGCGAGGAAGTCCGCAAAGGTTCTCTTGATTCTCTAAGCTTGACCCTTGAAGATTTGGCTGGAAAGAAATCCTGAAATTTTGGAACGTCATCTATCTTAAGAGCAAATAGTTACTTAACTCGGGTTTCGGTTTCCCTGGTTTGAAATTAGAAGCTACTTCATATCTGGATATTTGGTGTTCGGATAAAGATGTTTCAAGGTCTGTGGTTCCAGTTGCTGGCTATCCTTGATTTGAGGTGAAGTTTATAAGAAACAACACCTGCTGGTCGAAATTTAGAAATTTGGGGCTGCCTGAAGTACATGCTCTCTCTTAAGAACTCAATCAAACAATTCGGATGATCATCAATGGGCTACAGATGACTGCACTTTGAATATCCATTATTCTATGAGCAATTTGTTGAACATTTGTAGTAAACGTAATAGAAAACATGTACCTATCAATTTTAGTATGAAGCATGTTTTTTTTT

Coding sequence (CDS)

ATGGCGACGAGGCGAATTCTTTCTCTTGCTTTCCGTTATCGGTTGCAGACCTCTCTTCCACACGAAAGCACTTGCCGAATTCACCCGATTGCAAATTCATGGTTCTTGACTGGGCACAGATTTTCAACAAGAGGAAATCAGACCGTGGCAAATCCAACAATAGCTGAGGATTCTAAAGACAATGAAGACAATAAGTTGAGGCCCATTTCTGAATTGGGTGATCCTCTTCATGAAAACAAGGATGATACTTCTGCTGTGAAGTACTCTGTTCTCTCCAATTTAAAATCATCCCCTAGGCATGACCTTGCCATGATCTTCACTTGCAAAGTCTGCGAGACAAGATCAGTCAAGACTGTTTGCCGTGAATCATACGAGAAGGGTGTGGTAGTGGCACGTTGTGGTGGATGCAGCAATTTACACCTGATTGCAGACCATCTTGGTTGGTTCGGCGAGCCAGGTAGTGTCGAAGACTTCCTGGCTGCTCGTGGCGAGGAAGTCCGCAAAGGTTCTCTTGATTCTCTAAGCTTGACCCTTGAAGATTTGGCTGGAAAGAAATCCTGA

Protein sequence

MATRRILSLAFRYRLQTSLPHESTCRIHPIANSWFLTGHRFSTRGNQTVANPTIAEDSKDNEDNKLRPISELGDPLHENKDDTSAVKYSVLSNLKSSPRHDLAMIFTCKVCETRSVKTVCRESYEKGVVVARCGGCSNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLEDLAGKKS

Homology

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BLAST of Clc05G23380 vs. NCBI nr
Match: XP_038891384.1 (DNL-type zinc finger protein isoform X1 [Benincasa hispida])

HSP 1 Score: 346.7 bits (888), Expect = 1.3e-91
Identity = 172/188 (91.49%), Postives = 176/188 (93.62%), Query Frame = 0


Query: 1   MATRRILSLAFRYRLQT--SLPHESTCRIHPIANSWFLTGHRFSTRGNQTVANPTIAEDS 60
           M +RR LSLA RYR +T  SLPHESTC IHP ANSWFLTGHRFS RGNQTVA P IAEDS
Sbjct: 1   MTSRRFLSLALRYRSKTSLSLPHESTCGIHPFANSWFLTGHRFSRRGNQTVATPAIAEDS 60

Query: 61  KDNEDNKLRPISELGDPLHENKDDTSAVKYSVLSNLKSSPRHDLAMIFTCKVCETRSVKT 120
           KDNEDNKL PIS+LGDPLHENKDDTSAVKYSVLSNLKSSPRHDLAMIFTCKVCETRS+KT
Sbjct: 61  KDNEDNKLTPISDLGDPLHENKDDTSAVKYSVLSNLKSSPRHDLAMIFTCKVCETRSIKT 120

Query: 121 VCRESYEKGVVVARCGGCSNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTL 180
           VCRESYEKGVVVARCGGCSNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTL
Sbjct: 121 VCRESYEKGVVVARCGGCSNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTL 180

Query: 181 EDLAGKKS 187
           EDLAGKKS
Sbjct: 181 EDLAGKKS 188

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BLAST of Clc05G23380 vs. NCBI nr
Match: XP_004142433.2 (uncharacterized protein LOC101207740 [Cucumis sativus] >KGN52257.1 hypothetical protein Csa_009137 [Cucumis sativus])

HSP 1 Score: 327.4 bits (838), Expect = 8.0e-86
Identity = 162/186 (87.10%), Postives = 169/186 (90.86%), Query Frame = 0


Query: 1   MATRRILSLAFRYRLQTSLPHESTCRIHPIANSWFLTGHRFSTRGNQTVANPTIAEDSKD 60
           MA RR LSLAFR+RLQTS   ESTC IH  ANSWFLTGH+F+ R N T A P IAEDSKD
Sbjct: 38  MAARRFLSLAFRHRLQTSPSLESTCPIHSFANSWFLTGHKFTRRENHTEATPAIAEDSKD 97

Query: 61  NEDNKLRPISELGDPLHENKDDTSAVKYSVLSNLKSSPRHDLAMIFTCKVCETRSVKTVC 120
           NEDNKLRPIS+LG PLHENKDDTS+VKYSVLSNLK SPRHDLAMIFTCKVCETRS+KTVC
Sbjct: 98  NEDNKLRPISDLGKPLHENKDDTSSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVC 157

Query: 121 RESYEKGVVVARCGGCSNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLED 180
           RESYEKGVVVARCGGC+NLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLED
Sbjct: 158 RESYEKGVVVARCGGCNNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLED 217

Query: 181 LAGKKS 187
           LAGK S
Sbjct: 218 LAGKTS 223

[Close]

BLAST of Clc05G23380 vs. NCBI nr
Match: XP_038891386.1 (DNL-type zinc finger protein isoform X2 [Benincasa hispida])

HSP 1 Score: 323.2 bits (827), Expect = 1.5e-84
Identity = 157/165 (95.15%), Postives = 159/165 (96.36%), Query Frame = 0


Query: 22  ESTCRIHPIANSWFLTGHRFSTRGNQTVANPTIAEDSKDNEDNKLRPISELGDPLHENKD 81
           ESTC IHP ANSWFLTGHRFS RGNQTVA P IAEDSKDNEDNKL PIS+LGDPLHENKD
Sbjct: 3   ESTCGIHPFANSWFLTGHRFSRRGNQTVATPAIAEDSKDNEDNKLTPISDLGDPLHENKD 62

Query: 82  DTSAVKYSVLSNLKSSPRHDLAMIFTCKVCETRSVKTVCRESYEKGVVVARCGGCSNLHL 141
           DTSAVKYSVLSNLKSSPRHDLAMIFTCKVCETRS+KTVCRESYEKGVVVARCGGCSNLHL
Sbjct: 63  DTSAVKYSVLSNLKSSPRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCGGCSNLHL 122

Query: 142 IADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLEDLAGKKS 187
           IADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLEDLAGKKS
Sbjct: 123 IADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLEDLAGKKS 167

[Close]

BLAST of Clc05G23380 vs. NCBI nr
Match: XP_008446866.1 (PREDICTED: DNL-type zinc finger protein [Cucumis melo] >XP_016900169.1 PREDICTED: DNL-type zinc finger protein [Cucumis melo])

HSP 1 Score: 321.2 bits (822), Expect = 5.7e-84
Identity = 160/186 (86.02%), Postives = 166/186 (89.25%), Query Frame = 0


Query: 1   MATRRILSLAFRYRLQTSLPHESTCRIHPIANSWFLTGHRFSTRGNQTVANPTIAEDSKD 60
           MA RR LSLAFR+RLQTS   ES   +HP ANSWFLTG+RF  R   T A P IAE+SKD
Sbjct: 1   MAARRFLSLAFRHRLQTSPSPESASPVHPFANSWFLTGYRFLRRETHTEATPAIAEESKD 60

Query: 61  NEDNKLRPISELGDPLHENKDDTSAVKYSVLSNLKSSPRHDLAMIFTCKVCETRSVKTVC 120
           NED KLRPISELGDPLHENKDDTS+VKYSVLSNLK SPRHDLAMIFTCKVCETRS+KTVC
Sbjct: 61  NEDTKLRPISELGDPLHENKDDTSSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVC 120

Query: 121 RESYEKGVVVARCGGCSNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLED 180
           RESYEKGVVVARCGGCSNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLED
Sbjct: 121 RESYEKGVVVARCGGCSNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLED 180

Query: 181 LAGKKS 187
           LAGK S
Sbjct: 181 LAGKTS 186

[Close]

BLAST of Clc05G23380 vs. NCBI nr
Match: XP_022138898.1 (uncharacterized protein LOC111009963 [Momordica charantia])

HSP 1 Score: 313.2 bits (801), Expect = 1.6e-81
Identity = 152/184 (82.61%), Postives = 167/184 (90.76%), Query Frame = 0


Query: 4   RRILSLAFRYRLQTSLPHESTCRIHPIANSWFLTGHRFSTRGNQTVANPTIAEDSKDNED 63
           RRI SL  RYR QTSLPHE TC+IHP ANS FLTGHRF  RGNQT+ANP +AEDSKDNED
Sbjct: 3   RRIFSLVSRYRSQTSLPHECTCQIHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNED 62

Query: 64  NKLRPISELGDPLHENK-DDTSAVKYSVLSNLKSSPRHDLAMIFTCKVCETRSVKTVCRE 123
           NKL+P+S+  DPL + K DD++AVKYSV+SNLK SPRHDLAMIFTCKVCETRS+KTVCR 
Sbjct: 63  NKLQPVSDSIDPLDQEKNDDSAAVKYSVISNLKMSPRHDLAMIFTCKVCETRSIKTVCRS 122

Query: 124 SYEKGVVVARCGGCSNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLEDLA 183
           SYEKGVVVARCGGC+NLHLIADHLGWFGEPGS+EDFLAARGEEVRKGS+DSLSLTL+DLA
Sbjct: 123 SYEKGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLA 182

Query: 184 GKKS 187
           GKKS
Sbjct: 183 GKKS 186

[Close]

BLAST of Clc05G23380 vs. ExPASy Swiss-Prot
Match: Q0IH40 (DNL-type zinc finger protein OS=Xenopus laevis OX=8355 GN=dnlz PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.4e-16
Identity = 38/78 (48.72%), Postives = 56/78 (71.79%), Query Frame = 0


Query: 94  LKSSPRHDLAMIFTCKVCETRSVKTVCRESYEKGVVVARCGGCSNLHLIADHLGWFGE-- 153
           L ++P     +I+TCKVC TRS KT+ + +Y KGVV+ RC GC N H+IAD+LGWF +  
Sbjct: 74  LPAAPSSHYRLIYTCKVCATRSSKTISKVAYHKGVVIVRCPGCENHHIIADNLGWFSDLE 133

Query: 154 -PGSVEDFLAARGEEVRK 169
              ++E+ LAA+GE+V++
Sbjct: 134 GRRNIEEILAAKGEQVQR 151

[Close]

BLAST of Clc05G23380 vs. ExPASy Swiss-Prot
Match: Q9D113 (DNL-type zinc finger protein OS=Mus musculus OX=10090 GN=Dnlz PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.0e-14
Identity = 40/80 (50.00%), Postives = 56/80 (70.00%), Query Frame = 0


Query: 104 MIFTCKVCETRSVKTVCRESYEKGVVVARCGGCSNLHLIADHLGWFGE---PGSVEDFLA 163
           +++TCKVC TRS K + + +Y +GVV+  C GC N H+IAD+L WF +     ++E+ LA
Sbjct: 75  LVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHIIADNLSWFSDLKGKRNIEEILA 134

Query: 164 ARGEEVRKGSLD-SLSLTLE 180
           ARGEEVR+ S D +L L LE
Sbjct: 135 ARGEEVRRVSGDGALELILE 154

[Close]

BLAST of Clc05G23380 vs. ExPASy Swiss-Prot
Match: A1L1P7 (DNL-type zinc finger protein OS=Danio rerio OX=7955 GN=dnlz PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.5e-14
Identity = 36/81 (44.44%), Postives = 55/81 (67.90%), Query Frame = 0


Query: 91  LSNLKSSPRHDLAMIFTCKVCETRSVKTVCRESYEKGVVVARCGGCSNLHLIADHLGWFG 150
           +  L+S+  H   +++TCKVC TRS+K + + +Y KGVV+  C GC N H+IAD+L WF 
Sbjct: 73  IGQLQSTHYH---LVYTCKVCSTRSMKKISKLAYHKGVVIVTCPGCKNHHVIADNLKWFS 132

Query: 151 E---PGSVEDFLAARGEEVRK 169
           +     ++E+ LAA+GE VR+
Sbjct: 133 DLEGKRNIEEILAAKGESVRR 150

[Close]

BLAST of Clc05G23380 vs. ExPASy Swiss-Prot
Match: Q5SXM8 (DNL-type zinc finger protein OS=Homo sapiens OX=9606 GN=DNLZ PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.9e-13
Identity = 37/80 (46.25%), Postives = 53/80 (66.25%), Query Frame = 0


Query: 104 MIFTCKVCETRSVKTVCRESYEKGVVVARCGGCSNLHLIADHLGWFGE---PGSVEDFLA 163
           +++TCKVC TRS K + + +Y +GVV+  C GC N H+IAD+LGWF +     ++E+ L 
Sbjct: 71  LVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHIIADNLGWFSDLNGKRNIEEILT 130

Query: 164 ARGEEV-RKGSLDSLSLTLE 180
           ARGE+V R     +L L LE
Sbjct: 131 ARGEQVHRVAGEGALELVLE 150

[Close]

BLAST of Clc05G23380 vs. ExPASy Swiss-Prot
Match: Q09759 (Uncharacterized protein C24H6.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC24H6.02c PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 7.4e-10
Identity = 31/73 (42.47%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 98  PRHDLAMIFTCKVCETRSVKTVCRESYEKGVVVARCGGCSNLHLIADHLGWFGEPG-SVE 157
           P+    + FTC VC TRS     +++Y  G V+ +C  C N HL+ADHL  F E   ++E
Sbjct: 72  PKPTYNVSFTCTVCNTRSNHNFSKQAYHNGTVLVQCPKCKNRHLMADHLKIFSEERVTIE 131

Query: 158 DFLAARGEEVRKG 170
           D LA +GE  +KG
Sbjct: 132 DILAKKGETFKKG 144

[Close]

BLAST of Clc05G23380 vs. ExPASy TrEMBL
Match: A0A0A0KUY3 (DNL-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G622720 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.9e-86
Identity = 162/186 (87.10%), Postives = 169/186 (90.86%), Query Frame = 0


Query: 1   MATRRILSLAFRYRLQTSLPHESTCRIHPIANSWFLTGHRFSTRGNQTVANPTIAEDSKD 60
           MA RR LSLAFR+RLQTS   ESTC IH  ANSWFLTGH+F+ R N T A P IAEDSKD
Sbjct: 38  MAARRFLSLAFRHRLQTSPSLESTCPIHSFANSWFLTGHKFTRRENHTEATPAIAEDSKD 97

Query: 61  NEDNKLRPISELGDPLHENKDDTSAVKYSVLSNLKSSPRHDLAMIFTCKVCETRSVKTVC 120
           NEDNKLRPIS+LG PLHENKDDTS+VKYSVLSNLK SPRHDLAMIFTCKVCETRS+KTVC
Sbjct: 98  NEDNKLRPISDLGKPLHENKDDTSSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVC 157

Query: 121 RESYEKGVVVARCGGCSNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLED 180
           RESYEKGVVVARCGGC+NLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLED
Sbjct: 158 RESYEKGVVVARCGGCNNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLED 217

Query: 181 LAGKKS 187
           LAGK S
Sbjct: 218 LAGKTS 223

[Close]

BLAST of Clc05G23380 vs. ExPASy TrEMBL
Match: A0A1S4DW08 (DNL-type zinc finger protein OS=Cucumis melo OX=3656 GN=LOC103489455 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.8e-84
Identity = 160/186 (86.02%), Postives = 166/186 (89.25%), Query Frame = 0


Query: 1   MATRRILSLAFRYRLQTSLPHESTCRIHPIANSWFLTGHRFSTRGNQTVANPTIAEDSKD 60
           MA RR LSLAFR+RLQTS   ES   +HP ANSWFLTG+RF  R   T A P IAE+SKD
Sbjct: 1   MAARRFLSLAFRHRLQTSPSPESASPVHPFANSWFLTGYRFLRRETHTEATPAIAEESKD 60

Query: 61  NEDNKLRPISELGDPLHENKDDTSAVKYSVLSNLKSSPRHDLAMIFTCKVCETRSVKTVC 120
           NED KLRPISELGDPLHENKDDTS+VKYSVLSNLK SPRHDLAMIFTCKVCETRS+KTVC
Sbjct: 61  NEDTKLRPISELGDPLHENKDDTSSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVC 120

Query: 121 RESYEKGVVVARCGGCSNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLED 180
           RESYEKGVVVARCGGCSNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLED
Sbjct: 121 RESYEKGVVVARCGGCSNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLED 180

Query: 181 LAGKKS 187
           LAGK S
Sbjct: 181 LAGKTS 186

[Close]

BLAST of Clc05G23380 vs. ExPASy TrEMBL
Match: A0A6J1CEE4 (uncharacterized protein LOC111009963 OS=Momordica charantia OX=3673 GN=LOC111009963 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 7.5e-82
Identity = 152/184 (82.61%), Postives = 167/184 (90.76%), Query Frame = 0


Query: 4   RRILSLAFRYRLQTSLPHESTCRIHPIANSWFLTGHRFSTRGNQTVANPTIAEDSKDNED 63
           RRI SL  RYR QTSLPHE TC+IHP ANS FLTGHRF  RGNQT+ANP +AEDSKDNED
Sbjct: 3   RRIFSLVSRYRSQTSLPHECTCQIHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNED 62

Query: 64  NKLRPISELGDPLHENK-DDTSAVKYSVLSNLKSSPRHDLAMIFTCKVCETRSVKTVCRE 123
           NKL+P+S+  DPL + K DD++AVKYSV+SNLK SPRHDLAMIFTCKVCETRS+KTVCR 
Sbjct: 63  NKLQPVSDSIDPLDQEKNDDSAAVKYSVISNLKMSPRHDLAMIFTCKVCETRSIKTVCRS 122

Query: 124 SYEKGVVVARCGGCSNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLEDLA 183
           SYEKGVVVARCGGC+NLHLIADHLGWFGEPGS+EDFLAARGEEVRKGS+DSLSLTL+DLA
Sbjct: 123 SYEKGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLA 182

Query: 184 GKKS 187
           GKKS
Sbjct: 183 GKKS 186

[Close]

BLAST of Clc05G23380 vs. ExPASy TrEMBL
Match: A0A6J1GYW7 (uncharacterized protein C24H6.02c OS=Cucurbita moschata OX=3662 GN=LOC111458755 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.1e-80
Identity = 155/186 (83.33%), Postives = 164/186 (88.17%), Query Frame = 0


Query: 1   MATRRILSLAFRYRLQTSLPHESTCRIHPIANSWFLTGHRFSTRGNQTVANPTIAEDSKD 60
           MATRRILSLA RYR QTSLPHE TC+IHP ANSWFLTG RF  RGNQ++AN +IAEDSKD
Sbjct: 1   MATRRILSLALRYRSQTSLPHERTCQIHPFANSWFLTGQRFWIRGNQSLANSSIAEDSKD 60

Query: 61  NEDNKLRPISELGDPLHENKDDTSAVKYSVLSNLKSSPRHDLAMIFTCKVCETRSVKTVC 120
           NE N           +HENKDD SAVKYSV+SNLKSSPRHDLAMIFTCKVCETRS+KTVC
Sbjct: 61  NERNS----------VHENKDDGSAVKYSVMSNLKSSPRHDLAMIFTCKVCETRSIKTVC 120

Query: 121 RESYEKGVVVARCGGCSNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLED 180
           RESYEKGVVVARCGGC+NLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSL+LED
Sbjct: 121 RESYEKGVVVARCGGCNNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLSLED 176

Query: 181 LAGKKS 187
           LAGK S
Sbjct: 181 LAGKNS 176

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BLAST of Clc05G23380 vs. ExPASy TrEMBL
Match: A0A6J1I1I7 (DNL-type zinc finger protein OS=Cucurbita maxima OX=3661 GN=LOC111468574 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.8e-79
Identity = 151/181 (83.43%), Postives = 161/181 (88.95%), Query Frame = 0


Query: 1   MATRRILSLAFRYRLQTSLPHESTCRIHPIANSWFLTGHRFSTRGNQTVANPTIAEDSKD 60
           MATRRILSLA RYR QTSLPHE +C+IHP ANSWFLTG RF  RGNQ++AN +IAEDSKD
Sbjct: 1   MATRRILSLALRYRSQTSLPHERSCQIHPFANSWFLTGQRFWIRGNQSLANSSIAEDSKD 60

Query: 61  NEDNKLRPISELGDPLHENKDDTSAVKYSVLSNLKSSPRHDLAMIFTCKVCETRSVKTVC 120
           NE          G+ +HENKDD SAVKYSVLSNLKSSPRHDLAMIFTCKVCETRS+KTVC
Sbjct: 61  NE----------GNSVHENKDDGSAVKYSVLSNLKSSPRHDLAMIFTCKVCETRSIKTVC 120

Query: 121 RESYEKGVVVARCGGCSNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLED 180
           RESYEKGVVVARCGGC+NLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSL+LED
Sbjct: 121 RESYEKGVVVARCGGCNNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLSLED 171

Query: 181 L 182
           L
Sbjct: 181 L 171

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BLAST of Clc05G23380 vs. TAIR 10
Match: AT3G54826.1 (Zim17-type zinc finger protein )

HSP 1 Score: 154.1 bits (388), Expect = 1.1e-37
Identity = 93/187 (49.73%), Postives = 115/187 (61.50%), Query Frame = 0


Query: 1   MATRRILSLAFRYRLQTSLPHESTCRIHPIANSWFLTGHRFSTRGNQTVANPTIA-EDSK 60
           +A RR LSL    + +  L   ST ++  ++NS F   H +     + ++    A E S 
Sbjct: 36  LALRRALSLFSNQQHRFPLSQVSTEQL-SLSNSLFSRSHVYGRLFQRQLSVIREANEASV 95

Query: 61  DNEDNKLRPISELGD-PLHENKDDTSAVKYSVLSNLKSSPRHDLAMIFTCKVCETRSVKT 120
            N  N     +E    P      +   VKY   S LK +PRHD  M+FTCKVC+TRS+K 
Sbjct: 96  TNVCNSSNSATESAKVPSPATPSEEMMVKYK--SQLKINPRHDFMMVFTCKVCDTRSMKM 155

Query: 121 VCRESYEKGVVVARCGGCSNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTL 180
             RESYE GVVV RCGGC NLHLIAD  GWFGEPGSVEDFLA++GEE +KGS+DSL+LT 
Sbjct: 156 ASRESYENGVVVVRCGGCDNLHLIADRRGWFGEPGSVEDFLASQGEEFKKGSMDSLNLTP 215

Query: 181 EDLAGKK 186
           EDLAG K
Sbjct: 216 EDLAGGK 219

[Close]

BLAST of Clc05G23380 vs. TAIR 10
Match: AT1G68730.1 (Zim17-type zinc finger protein )

HSP 1 Score: 53.1 bits (126), Expect = 2.7e-07
Identity = 28/76 (36.84%), Postives = 38/76 (50.00%), Query Frame = 0


Query: 72  LGDPLHENKDDTSAVKYSVLSNLKSSPRHDLAMIFTCKVCETRSVKTVCRESYEKGVVVA 131
           L D    N D+ S     V S     PR  L + FTC  C  R+ + + R +YEKG+V  
Sbjct: 76  LADDSKLNPDEESNDSAEVASIDIKLPRRSLQVEFTCNSCGERTKRLINRHAYEKGLVFV 135

Query: 132 RCGGCSNLHLIADHLG 148
           +C GC   H + D+LG
Sbjct: 136 QCAGCLKHHKLVDNLG 151

The following BLAST results are available for this feature:

BLAST of Clc05G23380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891384.1	1.3e-91	91.49	DNL-type zinc finger protein isoform X1 [Benincasa hispida]	[more]
XP_004142433.2	8.0e-86	87.10	uncharacterized protein LOC101207740 [Cucumis sativus] >KGN52257.1 hypothetical ...	[more]
XP_038891386.1	1.5e-84	95.15	DNL-type zinc finger protein isoform X2 [Benincasa hispida]	[more]
XP_008446866.1	5.7e-84	86.02	PREDICTED: DNL-type zinc finger protein [Cucumis melo] >XP_016900169.1 PREDICTED...	[more]
XP_022138898.1	1.6e-81	82.61	uncharacterized protein LOC111009963 [Momordica charantia]	[more]

BLAST of Clc05G23380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0IH40	2.4e-16	48.72	DNL-type zinc finger protein OS=Xenopus laevis OX=8355 GN=dnlz PE=2 SV=1	[more]
Q9D113	1.0e-14	50.00	DNL-type zinc finger protein OS=Mus musculus OX=10090 GN=Dnlz PE=1 SV=1	[more]
A1L1P7	6.5e-14	44.44	DNL-type zinc finger protein OS=Danio rerio OX=7955 GN=dnlz PE=2 SV=1	[more]
Q5SXM8	1.9e-13	46.25	DNL-type zinc finger protein OS=Homo sapiens OX=9606 GN=DNLZ PE=1 SV=1	[more]
Q09759	7.4e-10	42.47	Uncharacterized protein C24H6.02c OS=Schizosaccharomyces pombe (strain 972 / ATC...	[more]

BLAST of Clc05G23380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUY3	3.9e-86	87.10	DNL-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G622720 PE...	[more]
A0A1S4DW08	2.8e-84	86.02	DNL-type zinc finger protein OS=Cucumis melo OX=3656 GN=LOC103489455 PE=4 SV=1	[more]
A0A6J1CEE4	7.5e-82	82.61	uncharacterized protein LOC111009963 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A6J1GYW7	1.1e-80	83.33	uncharacterized protein C24H6.02c OS=Cucurbita moschata OX=3662 GN=LOC111458755 ...	[more]
A0A6J1I1I7	7.8e-79	83.43	DNL-type zinc finger protein OS=Cucurbita maxima OX=3661 GN=LOC111468574 PE=4 SV...	[more]

BLAST of Clc05G23380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54826.1	1.1e-37	49.73	Zim17-type zinc finger protein	[more]
AT1G68730.1	2.7e-07	36.84	Zim17-type zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007853	Zinc finger, DNL-type	PFAM	PF05180	zf-DNL	coord: 104..164 e-value: 3.4E-25 score: 87.8
IPR007853	Zinc finger, DNL-type	PROSITE	PS51501	ZF_DNL	coord: 97..186 score: 17.63558
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..80
None	No IPR available	PANTHER	PTHR20922:SF13	DNL-TYPE ZINC FINGER PROTEIN	coord: 38..185
IPR024158	Mitochondrial import protein TIM15	PANTHER	PTHR20922	UNCHARACTERIZED	coord: 38..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G23380.1	Clc05G23380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0030150	protein import into mitochondrial matrix
biological_process	GO:0050821	protein stabilization
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0008270	zinc ion binding