Clc05G18350 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCTGTACTCTGAAGCGATGGAGGACTCCATAACAGAGGACAGTGCACAGGAACTTTTTGAAATCGCTGCTGACAAGTTTCAAGAAATGGCAGCTCTGGCATTCTTCAACTGGGGCAATGTTCACATGTCCAGAGCAAGGAAGCAGGTTTTCTTTCCAGAAGACAGTTCGAGAGAAACTTTACTTCTTCGGATTAAGGATGCATACGAGTGGGCACGAAAAGAATACAAAAAGGCTGAAATGAGATACGAAGAAGCTTTAAATGTAAAACCTGACTTCTATGAAGGTTTCCTTGCACTTGGGCAGCAGCAGTTTGAGCAAGCCAAGCTTTGCTGGTATTATGCAATTGCTAGCGGAAGCAAAATCGATTTGGAATCGAGCTTCTCCACGGAGGTCTTACAACTTTATAACAAGGCTGAGGACAGCATGGAGAAGGGTATGCTGATGTGGGAAGAAATGGAGGAGCAGCGCCTGAATGGACTCTCCAAAAGTGAAAAAATACAGATCTGAGTTGCAAAAAATGGGATTGGAAAGACTATTCAGTGAGATACCTGCTGATGAAGCTGCAGAGCTGGCTTCAAACATGAGATCACAGATATATCTTTTATGGGGAACCTTATTGTACGAGCGTTCTGTCGTGGAATATAAGATTGAACTACCAACCTGGGAGGAATGTTTGGAAGTATCGGTGGAAAAATTCGAACTTGCTGGTGCTTCCCAAACAGATATTGCAGTTATGATAAAGAATCATTGTTCAATGAAACTGCACTGGAAGGTAAGTACAAGCAGGCCTCCTTAGAGCTTTTTGTTCAATGTAATATTATTGAACTTTTCTTTTCACAATCTTTTTGTTTTATTAATAGAGTTTCTTATTATTTTGGGCGTGCAGGTTTCGGGTTCAAAATCGATGAGATCGTACAGGCATGGAATGAAATGTATGATGCTAAAAGGTGGCAGTTTGGTGTTCCATCTTTCCGCCTTGAGCCTTTGTTTCGGCGCCGGGCTCCAAAACTTCACTTCACTCTGGAGCATTTTTGAGAGTTTTGTCGTTGATGGAGGCATTCTTTAGAGGAAATTTAAAGCAATATTTCAGTTTTCTTTGCATCAAATTTTCTGGTGTTCTGCTTCCCACAAAGATAAAGGTAAAAGAGCATCTAGTGAACTTGATTATCTCATTTAGAAGCTTTCCATATTTTATTTCTTTTTTAACACCAAAATGCTCTGATTAAACTTCTATTTTAATTTGATAGATATTAATACAATCTGTTCATACAATCTATATGAACCATACCATGATGTAAATTAGCGACTTCCATTCTTGATCTCCTTTAGGGGGAGAGTTCTTATTCCATTTCAAGTGGTGTTTATAATCTTCATAGACCCTGTTGTTGTTAGTTTATTATATGCACAAGATATCGGAGCAGAGATGCCTCCTTGGTTTCTCCAAAGCTAGATCCTTTGTAACTTCAGTATATATTTTGTGTTTCGTTTCAGTCCTGAATTGAAGTTTCTGATTCAATTTATGCTTTTGAACTTGTTACATGTTTCTTTTCTTATCGTCCAAGTTACTCATGTCGGATTCTTTTTGTGGTTGCAGTTGTTCTGCACCAGCGGTTTTCGTTTCAATTCGTCGTTTACATGGTCAGAGTGTAAGTTTGTTTATAGTTTTATTCTTTTGCACTTTCATTCAAGAGAAGATTGGCGATTCAGCAGCAAAGGTATAGTTATAGAATTATTCATTATTCATCAACGATTTTATAGGGTGGAAGAAGAAATTTTATTTTGAATTTGATTTATGCGATTTGAATAGAGAGAATTTGTTGTTTGTGAAGTTTCAAGAGCAGTTTGTTTATGTTGTTATAGAGATTGTCAAATTGATTGTTTTGGAATTTGAAGAATGATGGAATGAATTATAGCTACAGCAAATTATTTTTTGTTACCTTTTTCTGTGCCTTTTAGTTTGAACTTGTTGCAAATATTTTGGTATTTTATAAACAAACCCTCTTGATTTCTTTAATTTCAGTTTCATTTAAGTTCTTTAAATTATTACTTTCAGAAAGAAAAGAAAAGAAAAGAAAAGAAGAAAAAACAAAACAAAAACAAAAAACAAAAAACCAAAAGCAAAACATTCTGTGTTTCAACTCATGAACTACAAGACTTTATTTATATATGAGATAGTACTTTCTCATATCTTAAAATTTCCTCAGTGAAACTGAAAAAAAAAAAAGAAAAAAAAAATCATAATGACATGAGTGATGTCCATCCATCAACTTTAGAGATGGTAATTTGTATGATTAATATAACATGTTTTGAAAAATAACAATACATTTAAATACAAATGTTGAGTTACAAATCTCACAAATTAACACAATGTTTAAAGCTTTTGTAGATAATAATTGGAAAATTATCTTAACAAAACAGTCGAAGATATTTACAACTAATAGTAAAATACACCGTATAAATCGCAATATCGATCTATTGCATATATCGATCTATTGCATATAGACGACAGTAAAATTTTGATTCATTTTGCAATATTTTAAGCTATTTGAAGAGAGCTTAACTAATTATAAATTTTTTTTTCATGTGAGAGATTCTAACTTATTTTGTTAGTTAGGTTTAGTTTAACCATTAAAATATTATTTATATAATTAATTTTATAAATTGAATGTTCTAATTTCTAAATTTGTAACACCTATATTTATAACTTTTATTCTAAAAAAATTAATTAATTAGTGTGGAAGAAAGTTAATGGTCCCCACATTAAGAAATTCAATAAAAATCAAAACACGTGTCATGGTTTGTTGGCGAGGGGCAAAAGGCATTTCACTGTTTTTATACGCTACTAACAAATAAAAATACTCCTTCCCCATTGGCTTTTTCTCATTTTCTCTAATCAAAATCTTTCCCTGATCCATCGTTCATCTCGAAGAAACCAATCAAACAGGTTTGCTCAGATCGTCCTTAATCAACGGATGCCGATGATCTCTCTTCCTCTACGGCGGTCAATCGATATGCCTTATGCTTACGGTACTGTTCTTCTTCCCTGTACATTGCTGGAAAACGCTCCTCCATCTTTGTAA ATGAAGCTGTACTCTGAAGCGATGGAGGACTCCATAACAGAGGACAGTGCACAGGAACTTTTTGAAATCGCTGCTGACAAGTTTCAAGAAATGGCAGCTCTGGCATTCTTCAACTGGGGCAATGTTCACATGTCCAGAGCAAGGAAGCAGGTTTTCTTTCCAGAAGACAGTTCGAGAGAAACTTTACTTCTTCGGATTAAGGATGCATACGAGTGGGCACGAAAAGAATACAAAAAGGCTGAAATGAGATACGAAGAAGCTTTAAATGTAAAACCTGACTTCTATGAAGGTTTCCTTGCACTTGGGCAGCAGCAGTTTGAGCAAGCCAAGCTTTGCTGGTATTATGCAATTGCTAGCGGAAGCAAAATCGATTTGGAATCGAGCTTCTCCACGGAGGTCTTACAACTTTATAACAAGGCTGAGGACAGCATGGAGAAGGGTATGCTGATGTGGGAAGAAATGGAGGAGCAGCGCCTGAATGGACTCTCCAAAAAGCTGGCTTCAAACATGAGATCACAGATATATCTTTTATGGGGAACCTTATTGTACGAGCGTTCTGTCGTGGAATATAAGATTGAACTACCAACCTGGGAGGAATGTTTGGAAGTATCGGTGGAAAAATTCGAACTTGCTGGTGCTTCCCAAACAGATATTGCAGTTATGATAAAGAATCATTGTTCAATGAAACTGCACTGGAAGTTTTCTTTGCATCAAATTTTCTGGTGTTCTGCTTCCCACAAAGATAAAGTTGTTCTGCACCAGCGGTTTTCGTTTCAATTCGTCGTTTACATGGTCAGAGTGTTTGCTCAGATCGTCCTTAATCAACGGATGCCGATGATCTCTCTTCCTCTACGGCGGTCAATCGATATGCCTTATGCTTACGGTACTGTTCTTCTTCCCTGTACATTGCTGGAAAACGCTCCTCCATCTTTGTAA ATGAAGCTGTACTCTGAAGCGATGGAGGACTCCATAACAGAGGACAGTGCACAGGAACTTTTTGAAATCGCTGCTGACAAGTTTCAAGAAATGGCAGCTCTGGCATTCTTCAACTGGGGCAATGTTCACATGTCCAGAGCAAGGAAGCAGGTTTTCTTTCCAGAAGACAGTTCGAGAGAAACTTTACTTCTTCGGATTAAGGATGCATACGAGTGGGCACGAAAAGAATACAAAAAGGCTGAAATGAGATACGAAGAAGCTTTAAATGTAAAACCTGACTTCTATGAAGGTTTCCTTGCACTTGGGCAGCAGCAGTTTGAGCAAGCCAAGCTTTGCTGGTATTATGCAATTGCTAGCGGAAGCAAAATCGATTTGGAATCGAGCTTCTCCACGGAGGTCTTACAACTTTATAACAAGGCTGAGGACAGCATGGAGAAGGGTATGCTGATGTGGGAAGAAATGGAGGAGCAGCGCCTGAATGGACTCTCCAAAAAGCTGGCTTCAAACATGAGATCACAGATATATCTTTTATGGGGAACCTTATTGTACGAGCGTTCTGTCGTGGAATATAAGATTGAACTACCAACCTGGGAGGAATGTTTGGAAGTATCGGTGGAAAAATTCGAACTTGCTGGTGCTTCCCAAACAGATATTGCAGTTATGATAAAGAATCATTGTTCAATGAAACTGCACTGGAAGTTTTCTTTGCATCAAATTTTCTGGTGTTCTGCTTCCCACAAAGATAAAGTTGTTCTGCACCAGCGGTTTTCGTTTCAATTCGTCGTTTACATGGTCAGAGTGTTTGCTCAGATCGTCCTTAATCAACGGATGCCGATGATCTCTCTTCCTCTACGGCGGTCAATCGATATGCCTTATGCTTACGGTACTGTTCTTCTTCCCTGTACATTGCTGGAAAACGCTCCTCCATCTTTGTAA MKLYSEAMEDSITEDSAQELFEIAADKFQEMAALAFFNWGNVHMSRARKQVFFPEDSSRETLLLRIKDAYEWARKEYKKAEMRYEEALNVKPDFYEGFLALGQQQFEQAKLCWYYAIASGSKIDLESSFSTEVLQLYNKAEDSMEKGMLMWEEMEEQRLNGLSKKLASNMRSQIYLLWGTLLYERSVVEYKIELPTWEECLEVSVEKFELAGASQTDIAVMIKNHCSMKLHWKFSLHQIFWCSASHKDKVVLHQRFSFQFVVYMVRVFAQIVLNQRMPMISLPLRRSIDMPYAYGTVLLPCTLLENAPPSL Homology
BLAST of Clc05G18350 vs. NCBI nr
Match: TYK19980.1 (heat shock protein 70 [Cucumis melo var. makuwa]) HSP 1 Score: 428.7 bits (1101), Expect = 4.3e-116 Identity = 224/253 (88.54%), Postives = 226/253 (89.33%), Query Frame = 0
BLAST of Clc05G18350 vs. NCBI nr
Match: XP_008452896.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103493781 [Cucumis melo]) HSP 1 Score: 426.4 bits (1095), Expect = 2.1e-115 Identity = 223/253 (88.14%), Postives = 225/253 (88.93%), Query Frame = 0
BLAST of Clc05G18350 vs. NCBI nr
Match: ADN34122.1 (heat shock protein 70 [Cucumis melo subsp. melo]) HSP 1 Score: 426.4 bits (1095), Expect = 2.1e-115 Identity = 223/253 (88.14%), Postives = 225/253 (88.93%), Query Frame = 0
BLAST of Clc05G18350 vs. NCBI nr
Match: KAA0064612.1 (heat shock protein 70 [Cucumis melo var. makuwa]) HSP 1 Score: 426.4 bits (1095), Expect = 2.1e-115 Identity = 223/253 (88.14%), Postives = 225/253 (88.93%), Query Frame = 0
BLAST of Clc05G18350 vs. NCBI nr
Match: XP_004145521.1 (protein PHOX1 [Cucumis sativus] >KGN55465.1 hypothetical protein Csa_012407 [Cucumis sativus]) HSP 1 Score: 425.2 bits (1092), Expect = 4.7e-115 Identity = 222/253 (87.75%), Postives = 225/253 (88.93%), Query Frame = 0
BLAST of Clc05G18350 vs. ExPASy Swiss-Prot
Match: F4IRM4 (Protein PHOX1 OS=Arabidopsis thaliana OX=3702 GN=PHOX1 PE=1 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 1.4e-85 Identity = 159/253 (62.85%), Postives = 196/253 (77.47%), Query Frame = 0
BLAST of Clc05G18350 vs. ExPASy Swiss-Prot
Match: F4JTI1 (Protein PHOX4 OS=Arabidopsis thaliana OX=3702 GN=PHOX4 PE=2 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 1.5e-84 Identity = 161/253 (63.64%), Postives = 192/253 (75.89%), Query Frame = 0
BLAST of Clc05G18350 vs. ExPASy Swiss-Prot
Match: K7TQE3 (HSP-interacting protein OS=Zea mays OX=4577 GN=HIP PE=1 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 2.3e-64 Identity = 133/253 (52.57%), Postives = 175/253 (69.17%), Query Frame = 0
BLAST of Clc05G18350 vs. ExPASy Swiss-Prot
Match: O48802 (Protein CLMP1 OS=Arabidopsis thaliana OX=3702 GN=CLMP1 PE=1 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 6.7e-56 Identity = 118/261 (45.21%), Postives = 166/261 (63.60%), Query Frame = 0
BLAST of Clc05G18350 vs. ExPASy Swiss-Prot
Match: F4K487 (Protein PHOX3 OS=Arabidopsis thaliana OX=3702 GN=PHOX3 PE=1 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 4.7e-41 Identity = 101/244 (41.39%), Postives = 152/244 (62.30%), Query Frame = 0
BLAST of Clc05G18350 vs. ExPASy TrEMBL
Match: A0A5D3D933 (Heat shock protein 70 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00940 PE=4 SV=1) HSP 1 Score: 428.7 bits (1101), Expect = 2.1e-116 Identity = 224/253 (88.54%), Postives = 226/253 (89.33%), Query Frame = 0
BLAST of Clc05G18350 vs. ExPASy TrEMBL
Match: A0A5A7V8D8 (Heat shock protein 70 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G003350 PE=4 SV=1) HSP 1 Score: 426.4 bits (1095), Expect = 1.0e-115 Identity = 223/253 (88.14%), Postives = 225/253 (88.93%), Query Frame = 0
BLAST of Clc05G18350 vs. ExPASy TrEMBL
Match: E5GCC3 (Heat shock protein 70 OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 426.4 bits (1095), Expect = 1.0e-115 Identity = 223/253 (88.14%), Postives = 225/253 (88.93%), Query Frame = 0
BLAST of Clc05G18350 vs. ExPASy TrEMBL
Match: A0A1S3BVR4 (LOW QUALITY PROTEIN: uncharacterized protein LOC103493781 OS=Cucumis melo OX=3656 GN=LOC103493781 PE=4 SV=1) HSP 1 Score: 426.4 bits (1095), Expect = 1.0e-115 Identity = 223/253 (88.14%), Postives = 225/253 (88.93%), Query Frame = 0
BLAST of Clc05G18350 vs. ExPASy TrEMBL
Match: A0A0A0L0I5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652770 PE=4 SV=1) HSP 1 Score: 425.2 bits (1092), Expect = 2.3e-115 Identity = 222/253 (87.75%), Postives = 225/253 (88.93%), Query Frame = 0
BLAST of Clc05G18350 vs. TAIR 10
Match: AT2G25290.1 (Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein ) HSP 1 Score: 317.8 bits (813), Expect = 9.9e-87 Identity = 159/253 (62.85%), Postives = 196/253 (77.47%), Query Frame = 0
BLAST of Clc05G18350 vs. TAIR 10
Match: AT2G25290.2 (Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein ) HSP 1 Score: 317.8 bits (813), Expect = 9.9e-87 Identity = 159/253 (62.85%), Postives = 196/253 (77.47%), Query Frame = 0
BLAST of Clc05G18350 vs. TAIR 10
Match: AT2G25290.3 (Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein ) HSP 1 Score: 317.8 bits (813), Expect = 9.9e-87 Identity = 159/253 (62.85%), Postives = 196/253 (77.47%), Query Frame = 0
BLAST of Clc05G18350 vs. TAIR 10
Match: AT4G32070.1 (Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein ) HSP 1 Score: 314.3 bits (804), Expect = 1.1e-85 Identity = 161/253 (63.64%), Postives = 192/253 (75.89%), Query Frame = 0
BLAST of Clc05G18350 vs. TAIR 10
Match: AT1G62390.1 (Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein ) HSP 1 Score: 219.2 bits (557), Expect = 4.8e-57 Identity = 118/261 (45.21%), Postives = 166/261 (63.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|