Clc05G17320 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G17320
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Unknown protein
Location	ClcChr05: 25952146 .. 25959486 (-)
RNA-Seq Expression	Clc05G17320
Synteny	Clc05G17320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGAAACGAATTTTCCTGGTATAAAAAAGGATGTACGAAAGAAGCAAATCCAAACCCCTCCCGTCGGGTTTTCACTTTCTGGGCCTTCTGGCACACATCGTTAAGTTCCTACTCTTTCCCATGTTTTTTCTCTTAGGTCCTTAGAAGGAAAAAATAAGTAATTACAATTTTCCATTCTCGAACTCAAGTTTGTAAAAATTTTCAATCTATTCTTTATTTTCATAAGAAAATCCCCTTTAAAATTTCCCCTTTTTGATTTGTTAATCATTAATCTCAAAAATTTCAATTCCGAAGCCTATAATTTGAATTTGATTTTAATTTCATGGCCGATTCCTATTTTCTAGACCGACCGGCCGCCACCGGCTACAACCCCACCAGAATTTCAAATAAGTTTCCCCTTGAAAATACCGCTGTTTCTGGTTACACCCACGGCGGACTTTTGCAAACGCCGCCGCGGTTCCTCTCAGCTCCGTCATTCCACAGCCACCAATTTTACCCTTTCATCCAGCAACAACAACCACCGCCTCTCCTTCCGCCGCCGAGTACTCTACGGCCCCACCGCTCTCTTCCTTCTCAACCCCGATTCCACTCGCTTAAGAAATCCAAATCCACAAAAAGAGACAAAGACTCGGCGGCGGCGGTGGATCGGAGGATTTCTTCTAGAACCTTCTCGTCGGCGGCGGGGAAGAGGGTCGTTAGAGTTGAGGAATTGGAGAAATTGTCGGGGTGTTTATTTGCGGTTATTTCTCCGCCGCCCAGCAGTTTGCCGCTGCCCAAATTTTCTCTGAGGCCGGCGAAGCTTAATTGCAACGTGGAGGCTGCCGGAGCCGACGACGGAGCCGCCGCAGCGGACGATCTCCGGCGACTTCTTCGCCTTCACTGAAGCTGTGTTTCCGTGTTATTATGAATTGGGTGTAAGTTTGTTTTGTGTGTGTTAACTTTTTCTTCATGCATTGTTTTTTATCTCTGACATGGGGAACTCTATTACACTATATATTAAACCTTAATCTAAAATAATTATATTAATGTTTTTTTTCCTTTTCAGTATGAATTTCTTTTTTCTTTTTTTCTTTTTTAGAATTAGTTTTTTCATTTTTTTTCCCGATTTGGAAGTATAAGGAAAATTGAATTTCGTGAATTAATTATTATTTGATATTAGTGGTTCCCCCGGGGAGATTTGTGCTTATATAATTGTTACTTAACCTATCTTCACGAAGAGTTTTTTTTTTTTTTTTTTTTTTCATTCAATAAATAATTTATAGAAAAATTATTTTAAATGATAAAACTGTTAAAAATATTTATAAATAATAGTAAAATATCATAGTTTATTTGCAATAAATCGTATGTTTATTTTGTCACAAATAGACACAGATAGTAGCCTATTGACTGTAAAATTGTATTATATTTGTAAATATTTTAGCTTATTTTTTTATATTTGAAAACAACCATAAATTACATGTGAATACTGATTTTTCTTTCCACAAAATATATGTAAATATTGACTACTCATCCATTAATTAATTTTTTTAAAAATAATTATGAAGTGTTTCAAGGATATAAATAGTAAGTAGATGTTAGACAAATAACATAAGCATAATTCAATTGTCATTAAAATTTATCCTAGTTATCAAGATATTATGGCTTCAAATCTTTCCTCTCTAATTGTTGTATTAAAAGAAAAAAAAATAGATGCTAGTAAGTGTGTATATGGCTATTACAAAGAAATAAAAAAAATAAAAAATAAAAAAAGACGTGAATGCAATTTTGTAGATAAGAATGTGAATGCAATTTAATCAAGAGTTTGAATCTAAAACATTTTAAAAGAGCAAAGTATAAATACTCTAACCATTTGTTAGGAGAATATACATGTAATTTGACCCATAATTATACAATTTCATCTGTTTTTCTCAGTATTTTTTGTTTTTAAAGTTTTTTTTTCTTACCCATGTAAATAATAAATATGTGTGGCAGTAAAAAAAACCAGTAACTGATCATGAACTATGATTGTATGATTGTTTGGTGGGGAATATGTATTTTGAAAAATTATGCTTATAAGGGTGTGACAATTTATTTTATCCTATTCTAACCTATCTTCGGAATAATTTTAAATACTTGGTATAAAATCTATCGACATAAAATTAAAAATGAAAGACCATTTTAAAATGGTTCTTAGTCAAAATTTTATACCAAGGACAAGGATACACTATTGGACTAAATTGTTTTGTCTCTTCATCTACCAATTACTCAGAGATAGAGATATTTAAAATTCAAACAAAGAAACTTAACACATACATACTTGAAAGACACGTGCATTGTATTTAGTTAAAATTTGTTAGAATTTTAACTTTTACCATGAAATTTTGAATGAGTTCATAACTCATTTAGTTTGAATAATAAGTATTTAACATAAATTTAGTAATAGAATGGAAAAGTATTTGAATAATACACATATGATATATTAATTGAAGAAATAGTTATAAAAAAAAGTTTCTGCAGGAGTAGCATAAAATATCACCCAGATTGTCTTTTTTGTTTCCTTTTTTCCTTTTTTCTTTTTATGTTCTTTTGAATTTGATTGATTTTTGAAAGGGAAAAAAAGAATCATAAATGTTAATATTAACATTTTAAATCATTTAAGTTTGTATTAGATATGTACTTTGTTTCTTTAATATTAATAATCGAAAAGGATACAAAATTTCACTTGTTTAAAAAAAAAAAAAAACTATTATTGTTACTTTATTTTATGCAAATATAGTCTAACTTTCTTAAAAGATAAATTATGTGTTATCCATCAATAAAAAAGTAGTAAATAATTATATGTTCTTAAAATTAAGAAGAATAATAATAAAAAAGACGAATGGTTTCGATACGCAATCTTGTTTAAGTTGAAAAAAAATTGAGCATTCATGAAATCTAACATATATTTACCAACCCCTTATCTCCTTAAAATTAAAAAAATATATAAAAAATATATAATTATTTAAATTCAAAATCTTGTTTTCAAGTTTTGATAGTGTTCGCACAATGTTTCTGAAGAAACTTGATTCATGGATTTAAACTTAAGTAGATCTCTAGTACTTGATAAGCAGATCTCCAATACTTGATACCTTTAATTCTATCTGTGTTAAGTATAGAATTTTCTAAATTCCACAAATGAAGATAACTGTTCTATTTATAGAGTTCTCAGGTGAGCCTTGTGAACTTAGGTTTGGTTGGCCCATGGAATCCCACAAATAAAGAGAACTCTTCTATTTATATAGAGTTCACACTTGGCTTGGTTGGCCATGGATCTACCAATTGGATTTGATAGCCTATTTTAGAATTCAATTGGATTTTAGCTCAAATAATAATATCAAATTTGACCAAATTATTTTATTTAATCCATCAAGACGAAAATACATGTCGTCATCGGAATTTGTCAATTTATATCTTCAATATCAATTTGGAGCACGACATGTCAATTTGTGATTGGTCCAAAATTTCTTCTTCAACCAATAGTTCATAAAATCTACAAAATAATAACTATATTAAACAAAATAAAATACCTATTTGTATTCAATACTAAAGATAAAAATCTTAATTTAGATTCATTATCTACAAGATTCATAAAAGATTATCAAATAGGTTATATGTTGGGTTTTTTTTTTTAAATAATATTATAATAAGTAATTAGTAAACAATTATATTATATATTCTTATAATTAAAACAATGGAACAAACCAGAATAATTTAGATACAAAATATTGTTTCTTTTGAAAAAAATTGCACAAGAACTCCTTTTTTGAGTTGTATTTACATATATTTTTAAATAGGTTATTGGCAAATGATTATAACTTCTTAAAATAGAAGGATAGAATTGTTTATTTACATAAACTTTGTTTTCAAGATTTGAACATTCGTAAAATATAAATAATAAACTTTATTTTCAAGATTTGAACATTCGTAAAATGTAAATAATAATCATATAAAAGAAAAAAAATCACTACAAAAATATAATTCTTAATTTTAATTCAACCGAGCAAAAATTATAAAAAGAAATAAAAGAAGGATATTACAACCAACTTATCACATAAACTAAAAAATATATCACATTTTTTATGGAATAATGTATTTTTTACTAAAAAGAAAAAGATAGAAAAAATGATAAACTTTTCAGGATGACTTTTTTTAATTACAAAATCTTGAAAATGAATGCCTAGTGATAAAAAAAAAAAAAAAAAAACAAATGTATGTAAAAATAATACTTTTAAACAAATAGAATTGCTAAGATATAGAATCTTGTTGTTAAGATTCTAAATCTCTCCAAATTTAAATTAATAGTAAAAATAAAACCAGAAATATCGTAAGGATTAAATAAATAGACACAAAATAATACACAAAACAAAACATCGTTTCTAACTTTTAACTTTCAAAATAAACAAATGTGTATATTTGAATAATGACACTACTTTGTAAAATTGTTGATTATACTTTAAAATGTCTAGGTAACAAATCTAGACACTATCATAATACTTGAAAATAACAAACATGTTCGCCAAAATCTTTCTGAATTTGAATTCACCAATTCCAATACAAACAAACGTCAAAGGGATGAGAAACAACACTGAAAGAGAGAAAGAGAAAAAGAATAAACCACCTAACTTATTTAATAATCTTTAAAAATAAATCATTTAGAAGATTCTCCCAGTATAGTCAAAGATTTAAACAAAAATACGAAAACTTAATATATAAAAGAAAAAAAATCTTATTAAAAATTATATTTCAAAATATGATCAAATATAGAAATACACATGAATTGATTTGTTCATCGTTTACTTTTGCAAAATTTAAAACAAAACATACATATACAAGTAGTCATATCGCTCTTTTCACTTTCTTCCCTCTTAGTTTTCTTTACATTGCACGCTAATTAACTATCTTTGAGTGCACACTATTTAACTATATGCTCTAAATGAATTCATTTAAAGGAAAAAAAAACTTGAAAAGCAATACAAAAATATAAACAAAACTCTAGTATGTGGTTGTGGTTATATGTCCTGCAACTAGATCCTACTGTCCTATAATTATATTTAAAAAATGAAATAAAATATAAATCTCATAATTATAGATACTTTTTGTGATGATACTTTTTTTTCTAGTCAAACGTGTAGACGGTAGAGATTGATTTGAGTTGAGGTATGTTTCAAATGCACAAATTGTTATTCAAAAGAGATGCTTGGGTGAGAAGGTTTGGTTTGATCCATGATTTATGAATTGGTTTTACATAGAAGTTGAGGGCAAAATAGGAATATATCTAAAAATGGAAGGCAAAATGGAGAGTTATAGATTCTCCCCATTGTGATTCTTTTAATATAGTATAGATAATGTAATTTGGTAAATATCTCTCTAATAATAAAAAATTTTATTGCAATTTATTCATAATTTAACCCATATTATAGGTGAAAGTAGCGAAGTTTTACTACGTGATTAAAACAATGACATTAATTATTGAGAGTTGACGAGAAATTTAAGAAGTACAACATTCTAAAACAATAATTATAAACACTTTAATGTAAGTTAATTAATTCATAAGAGAAAAAAATTCCACCAATATGAAAATAGCTTAACAAGAATGAACCATCGACGAGAGTTTAGAAGTTCAAATTTAGTCTACATACTCTTCAACTAAATAAAAATAAGAAGAAAAGAAAATTCAGATGCTTAGGCTTTATTTGCCACCAAATTACTCATTTTCTATGATCAATGAGATTTTCGGAGAAATTTAATTCGTGGAATTTGAACTTTATATTTATATTAATTTCAGTGTTGTGAGTACAATCTTTAATATTTGATCATTTGATTCTTCATCTCGAAAAGTAAACTTTAATCCTTCTTATTTGATCGGTCATTGGGTTTGATGACCTTTTGGGTGATGATCGACCTTTGGGCATGATGATCTTCTCGGTTGATCGGCCTTTAGCTTGATGATCTTCTCAGTTGATCGGCCTTTAGCTTGATGATCTTCTCGGTTGATCGGCCTTTAGCTTAATGATCTTCCCTTTGGAGTTTTTGACTTCAAGAGCTTCAAAGAAAGTCTTCTGATCTTCTAAAAGTACTTCGAGCTTAAGTCCTTCGAGCTTCAGTCTTTCAAAACTTCAGATCTTTAGAGCTCGAGGGAGATCTTTAGAGCTCGAGGGAGTTGTGATCTTTAGAGCTTCATTTTTCAGAGTTTTAGCACTCCGTCGTCAATGCTTCCAAATCCCTTAAAATGAAGGGGGTAAGACCTCTATTTATAGAGGTTTCTCATGGGGCTTACATGGCTTGGGCACAATTGCTTTTGGGCTTGGGCTTGTGCCCAATATTTTCTTTGGCCCAAAATTCTACAATAGGCTTAAATTGTATTGGACTTTGAACTGGGTGACTTTAATTACTTAACTTGATTCAATTTTGTAATTTCCACAATGCATTTTTGCACGTCTATACGGTGGGTGAATCTTGAAAAAGATAATTGGCAATCAAAGCACGCTTTTGAATCCTTTGGTGCATTGTCTTGATCAAAATGTGAATTTAGCTCAAAATTTTCATTTGAATTTTGTTTGCTTGACACATTTTTTTCGCCAAGTAAACAAAAGATGTTAGTCTTTAATTTGAACTAAAGTAGAATTTATGCTCCACTTTAATTACAAATTGAATTTGAAGTAACTCAAATTCTAACCACCAAAAATTTGTCCTATTAAGTGGAATCGACTGGTTCGTTAGTGTTAAGTATCGTGGAAATCAGCTTTTGTCGTTGTCGTAATTTCGCCATATGCTTCTACCACATCCTTTTCTTTTGGCCTACTGAAATTGCTACTGTGCACTTTTTTCTTGCGGCTGGAAGTGAAAGAAGTGAGAGAGATTTTAGGAAGAGGCAGAAGAAGAAAAAGATGGGCTTGGTTTAGAATTTTAGGGTTTAGGATTTCTCATATATATAATTAACTTCTTTTCTTTCATTTATCTTCTTTTTCCTTTTTTTTTTCTTCTTTTTTTATTTTATTTGGGGAGTTTTTTTTTTCATTTTTTTTAAAACTTTTCTTTCCCAATTTCTTTTCTCTTCTTTTTTTTTCTTTTAAACTATTTTTCAATTTTTCTTTGGCTTCCTTTTTCTAACTTATTTAGAAACAAACTTATTTAGGCCGGAACTGAATCTAACATTTTTGGAAATTTACTTCTTTTTTTAATGTTGTAATTTTCTTTTTTTTTTTTGTTTAATCATAAATTTTTTTTAATACTTTGCCCCCACTTTTTTTTTTACCGGTCCTAGTATGTGCAGAACCACGACTTAAACATCCCGAGAAGAATAGAGCCATGACTTAAACATCC

mRNA sequence

CAGAAACGAATTTTCCTGGTATAAAAAAGGATGTACGAAAGAAGCAAATCCAAACCCCTCCCGTCGGGTTTTCACTTTCTGGGCCTTCTGGCACACATCGTTAAGTTCCTACTCTTTCCCATGTTTTTTCTCTTAGGTCCTTAGAAGGAAAAAATAAGTAATTACAATTTTCCATTCTCGAACTCAAGTTTGTAAAAATTTTCAATCTATTCTTTATTTTCATAAGAAAATCCCCTTTAAAATTTCCCCTTTTTGATTTGTTAATCATTAATCTCAAAAATTTCAATTCCGAAGCCTATAATTTGAATTTGATTTTAATTTCATGGCCGATTCCTATTTTCTAGACCGACCGGCCGCCACCGGCTACAACCCCACCAGAATTTCAAATAAGTTTCCCCTTGAAAATACCGCTGTTTCTGGTTACACCCACGGCGGACTTTTGCAAACGCCGCCGCGGTTCCTCTCAGCTCCGTCATTCCACAGCCACCAATTTTACCCTTTCATCCAGCAACAACAACCACCGCCTCTCCTTCCGCCGCCGAGTACTCTACGGCCCCACCGCTCTCTTCCTTCTCAACCCCGATTCCACTCGCTTAAGAAATCCAAATCCACAAAAAGAGACAAAGACTCGGCGGCGGCGGTGGATCGGAGGATTTCTTCTAGAACCTTCTCGTCGGCGGCGGGGAAGAGGGTCGTTAGAGTTGAGGAATTGGAGAAATTGTCGGGGTGTTTATTTGCGGTTATTTCTCCGCCGCCCAGCAGTTTGCCGCTGCCCAAATTTTCTCTGAGGCCGGCGAAGCTTAATTGCAACGTGGAGGCTGCCGGAGCCGACGACGGAGCCGCCGCAGCGGACGATCTCCGGCGACTTCTTCGCCTTCACTGAAGCTGTGTTTCCGTGTTATTATGAATTGGGTTATGTGCAGAACCACGACTTAAACATCCCGAGAAGAATAGAGCCATGACTTAAACATCC

Coding sequence (CDS)

ATGGCCGATTCCTATTTTCTAGACCGACCGGCCGCCACCGGCTACAACCCCACCAGAATTTCAAATAAGTTTCCCCTTGAAAATACCGCTGTTTCTGGTTACACCCACGGCGGACTTTTGCAAACGCCGCCGCGGTTCCTCTCAGCTCCGTCATTCCACAGCCACCAATTTTACCCTTTCATCCAGCAACAACAACCACCGCCTCTCCTTCCGCCGCCGAGTACTCTACGGCCCCACCGCTCTCTTCCTTCTCAACCCCGATTCCACTCGCTTAAGAAATCCAAATCCACAAAAAGAGACAAAGACTCGGCGGCGGCGGTGGATCGGAGGATTTCTTCTAGAACCTTCTCGTCGGCGGCGGGGAAGAGGGTCGTTAGAGTTGAGGAATTGGAGAAATTGTCGGGGTGTTTATTTGCGGTTATTTCTCCGCCGCCCAGCAGTTTGCCGCTGCCCAAATTTTCTCTGAGGCCGGCGAAGCTTAATTGCAACGTGGAGGCTGCCGGAGCCGACGACGGAGCCGCCGCAGCGGACGATCTCCGGCGACTTCTTCGCCTTCACTGA

Protein sequence

MADSYFLDRPAATGYNPTRISNKFPLENTAVSGYTHGGLLQTPPRFLSAPSFHSHQFYPFIQQQQPPPLLPPPSTLRPHRSLPSQPRFHSLKKSKSTKRDKDSAAAVDRRISSRTFSSAAGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAKLNCNVEAAGADDGAAAADDLRRLLRLH

Homology

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BLAST of Clc05G17320 vs. NCBI nr
Match: KAA0063295.1 (uncharacterized protein E6C27_scaffold205G001180 [Cucumis melo var. makuwa])

HSP 1 Score: 286.6 bits (732), Expect = 1.6e-73
Identity = 155/193 (80.31%), Postives = 166/193 (86.01%), Query Frame = 0


Query: 1   MADSYFLDRPAATGYNPTRISNKFPLEN-TAVSGYTHGGLLQTPPRFLSAPSFHSHQFYP 60
           MAD YFLDR  +TG+N TRI+N F LEN  AVSGY+HGGLLQTPPRFLSAPSFH+HQ YP
Sbjct: 1   MADPYFLDRSPSTGHNLTRITNNFHLENLAAVSGYSHGGLLQTPPRFLSAPSFHTHQSYP 60

Query: 61  FIQQQQPPPLLPP----PSTLRPHRSLPSQPRFHSLKKSKSTKRDKDSAAAVDRRISSRT 120
           F QQ + PPLLPP    PS LRPHRSL SQPR HSLKKSKST+++KDSAA VDRRI SRT
Sbjct: 61  FFQQNKSPPLLPPPPTTPSNLRPHRSLHSQPRSHSLKKSKSTRKEKDSAAVVDRRIPSRT 120

Query: 121 FSSA-AGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAK-LNCNVEAAGADDGA 180
            SSA A KRVVRVEELEKLSGC FA+ISPPPSSLPLPKFS+RPAK L CNVEAAGADDGA
Sbjct: 121 ISSAGAAKRVVRVEELEKLSGCFFAIISPPPSSLPLPKFSMRPAKALKCNVEAAGADDGA 180

Query: 181 AAADDLRRLLRLH 187
           AAADDLRRLLRLH
Sbjct: 181 AAADDLRRLLRLH 193

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BLAST of Clc05G17320 vs. NCBI nr
Match: XP_008466665.1 (PREDICTED: uncharacterized protein LOC103504021 [Cucumis melo] >TYK31480.1 uncharacterized protein E5676_scaffold455G007960 [Cucumis melo var. makuwa])

HSP 1 Score: 285.0 bits (728), Expect = 4.5e-73
Identity = 154/193 (79.79%), Postives = 165/193 (85.49%), Query Frame = 0


Query: 1   MADSYFLDRPAATGYNPTRISNKFPLEN-TAVSGYTHGGLLQTPPRFLSAPSFHSHQFYP 60
           MAD YFLDR  +TG+N TRI+N F LEN  AVSGY+HGGLLQTPPRFLSAPSFH+HQ YP
Sbjct: 1   MADPYFLDRSPSTGHNLTRITNNFHLENLAAVSGYSHGGLLQTPPRFLSAPSFHTHQSYP 60

Query: 61  FIQQQQPPPLLPP----PSTLRPHRSLPSQPRFHSLKKSKSTKRDKDSAAAVDRRISSRT 120
           F QQ + PPLLPP    PS LRPHRSL SQPR HSLKKSKST+++KDSA  VDRRI SRT
Sbjct: 61  FFQQNKSPPLLPPPPTTPSNLRPHRSLHSQPRSHSLKKSKSTRKEKDSATVVDRRIPSRT 120

Query: 121 FSSA-AGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAK-LNCNVEAAGADDGA 180
            SSA A KRVVRVEELEKLSGC FA+ISPPPSSLPLPKFS+RPAK L CNVEAAGADDGA
Sbjct: 121 ISSAGAAKRVVRVEELEKLSGCFFAIISPPPSSLPLPKFSMRPAKALKCNVEAAGADDGA 180

Query: 181 AAADDLRRLLRLH 187
           AAADDLRRLLRLH
Sbjct: 181 AAADDLRRLLRLH 193

[Close]

BLAST of Clc05G17320 vs. NCBI nr
Match: KGN60046.1 (hypothetical protein Csa_001363 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 7.8e-73
Identity = 153/195 (78.46%), Postives = 164/195 (84.10%), Query Frame = 0


Query: 1   MADSYFLDRPAATGYNPTRISNKFPLEN-TAVSGYTHGGLLQTPPRFLSAPSFHSHQFYP 60
           MAD YFLDR  +TG+N TRISN F LEN  AVSG++HGGLLQTPPRFLSAPSFH+HQ YP
Sbjct: 1   MADPYFLDRSPSTGHNLTRISNHFHLENLAAVSGFSHGGLLQTPPRFLSAPSFHTHQSYP 60

Query: 61  FIQQQQPPPLLPPP-----STLRPHRSLPSQPRFHSLKKSKSTKRDKDSAAAVDRRISSR 120
           F QQ + PPLLPPP     S +RPHRSLPSQPR HSLKKSKST+++KDSAA VDRRI SR
Sbjct: 61  FFQQNKSPPLLPPPPTPTQSNIRPHRSLPSQPRSHSLKKSKSTRKEKDSAAVVDRRIPSR 120

Query: 121 TFSS--AAGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAK-LNCNVEAAGADD 180
           T SS  A  KRVVRVEELEKLSGC F VISPPPSSLPLPKFS+RPAK LNCNVEA G DD
Sbjct: 121 TISSAGAGAKRVVRVEELEKLSGCFFTVISPPPSSLPLPKFSMRPAKALNCNVEAVGVDD 180

Query: 181 GAAAADDLRRLLRLH 187
           GAAAADDLRRLLRLH
Sbjct: 181 GAAAADDLRRLLRLH 195

[Close]

BLAST of Clc05G17320 vs. NCBI nr
Match: KAG6608604.1 (hypothetical protein SDJN03_01946, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037922.1 hypothetical protein SDJN02_01553, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 242.7 bits (618), Expect = 2.6e-60
Identity = 129/167 (77.25%), Postives = 138/167 (82.63%), Query Frame = 0


Query: 1   MADSYFLDRPAATGYNPTRISNKFPLENTAVSGYTHGGLLQTPPRFLSAPSFHSHQFYPF 60
           MAD YFLDR + +GY PTR+SN+F L+N AV G +HGGLLQTPPRF S PS HSHQ  PF
Sbjct: 1   MADPYFLDRTSTSGYKPTRVSNEFHLQNAAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPF 60

Query: 61  I--QQQQPPPLLPPPSTLRPHRSLPSQPR-FHSLKKSKSTKRDKDSAAAVDRRISSRTFS 120
           I  QQQQPPPLL PP  LRPHR+L SQPR  HSLKKSKS KRDKDSAA VDRR+ SRTFS
Sbjct: 61  IQQQQQQPPPLLTPPPILRPHRTLSSQPRSSHSLKKSKSIKRDKDSAAVVDRRVPSRTFS 120

Query: 121 S-AAGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAKLNCN 164
           S AA KRVVRVEE +KLSGCLFAVISPPPSSLPLPKF LRP KLNCN
Sbjct: 121 SPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTKLNCN 167

[Close]

BLAST of Clc05G17320 vs. NCBI nr
Match: XP_022139188.1 (uncharacterized protein LOC111010153 [Momordica charantia])

HSP 1 Score: 224.6 bits (571), Expect = 7.3e-55
Identity = 142/199 (71.36%), Postives = 152/199 (76.38%), Query Frame = 0


Query: 1   MADSYFLDRPAATGYNPTR---ISN---KFPLEN-TAVSGYTHGGLLQTPPRFLSAPS-F 60
           MAD YFLDRP   GYN TR   ISN    + LEN  A +G  HGGLL+TPPRF SAPS  
Sbjct: 1   MADPYFLDRPPPAGYNQTRSLPISNNNYNYNLENIAAAAGNNHGGLLRTPPRFFSAPSII 60

Query: 61  HSHQFYPFIQQQQPPPLLPPPSTLRPHRSLPSQP-RFHSL--KKSKSTKRDKD--SAAAV 120
           H HQF+PFI Q QPPPLLPPP  LRPHRSLPSQP R HSL  KKSKS KR +   S A V
Sbjct: 61  HGHQFHPFI-QLQPPPLLPPP-ILRPHRSLPSQPARSHSLNPKKSKSAKRSEKSFSPAVV 120

Query: 121 DRRISSRTFS-SAAGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAKLNCNVEA 180
           DRR +SRT S +AA KRVV+VEEL+ LSGCLFA +SPPPSSLPLPKF LRPAKLNCNVEA
Sbjct: 121 DRRAASRTSSTAAAAKRVVKVEELD-LSGCLFA-LSPPPSSLPLPKFCLRPAKLNCNVEA 180

Query: 181 AGADDGAAAADDLRRLLRL 186
           AG DDGA  ADDLRRLLRL
Sbjct: 181 AGVDDGATTADDLRRLLRL 195

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BLAST of Clc05G17320 vs. ExPASy TrEMBL
Match: A0A5A7VBL8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001180 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 7.6e-74
Identity = 155/193 (80.31%), Postives = 166/193 (86.01%), Query Frame = 0


Query: 1   MADSYFLDRPAATGYNPTRISNKFPLEN-TAVSGYTHGGLLQTPPRFLSAPSFHSHQFYP 60
           MAD YFLDR  +TG+N TRI+N F LEN  AVSGY+HGGLLQTPPRFLSAPSFH+HQ YP
Sbjct: 1   MADPYFLDRSPSTGHNLTRITNNFHLENLAAVSGYSHGGLLQTPPRFLSAPSFHTHQSYP 60

Query: 61  FIQQQQPPPLLPP----PSTLRPHRSLPSQPRFHSLKKSKSTKRDKDSAAAVDRRISSRT 120
           F QQ + PPLLPP    PS LRPHRSL SQPR HSLKKSKST+++KDSAA VDRRI SRT
Sbjct: 61  FFQQNKSPPLLPPPPTTPSNLRPHRSLHSQPRSHSLKKSKSTRKEKDSAAVVDRRIPSRT 120

Query: 121 FSSA-AGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAK-LNCNVEAAGADDGA 180
            SSA A KRVVRVEELEKLSGC FA+ISPPPSSLPLPKFS+RPAK L CNVEAAGADDGA
Sbjct: 121 ISSAGAAKRVVRVEELEKLSGCFFAIISPPPSSLPLPKFSMRPAKALKCNVEAAGADDGA 180

Query: 181 AAADDLRRLLRLH 187
           AAADDLRRLLRLH
Sbjct: 181 AAADDLRRLLRLH 193

[Close]

BLAST of Clc05G17320 vs. ExPASy TrEMBL
Match: A0A5D3E771 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007960 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.2e-73
Identity = 154/193 (79.79%), Postives = 165/193 (85.49%), Query Frame = 0


Query: 1   MADSYFLDRPAATGYNPTRISNKFPLEN-TAVSGYTHGGLLQTPPRFLSAPSFHSHQFYP 60
           MAD YFLDR  +TG+N TRI+N F LEN  AVSGY+HGGLLQTPPRFLSAPSFH+HQ YP
Sbjct: 1   MADPYFLDRSPSTGHNLTRITNNFHLENLAAVSGYSHGGLLQTPPRFLSAPSFHTHQSYP 60

Query: 61  FIQQQQPPPLLPP----PSTLRPHRSLPSQPRFHSLKKSKSTKRDKDSAAAVDRRISSRT 120
           F QQ + PPLLPP    PS LRPHRSL SQPR HSLKKSKST+++KDSA  VDRRI SRT
Sbjct: 61  FFQQNKSPPLLPPPPTTPSNLRPHRSLHSQPRSHSLKKSKSTRKEKDSATVVDRRIPSRT 120

Query: 121 FSSA-AGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAK-LNCNVEAAGADDGA 180
            SSA A KRVVRVEELEKLSGC FA+ISPPPSSLPLPKFS+RPAK L CNVEAAGADDGA
Sbjct: 121 ISSAGAAKRVVRVEELEKLSGCFFAIISPPPSSLPLPKFSMRPAKALKCNVEAAGADDGA 180

Query: 181 AAADDLRRLLRLH 187
           AAADDLRRLLRLH
Sbjct: 181 AAADDLRRLLRLH 193

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BLAST of Clc05G17320 vs. ExPASy TrEMBL
Match: A0A1S3CRS4 (uncharacterized protein LOC103504021 OS=Cucumis melo OX=3656 GN=LOC103504021 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.2e-73
Identity = 154/193 (79.79%), Postives = 165/193 (85.49%), Query Frame = 0


Query: 1   MADSYFLDRPAATGYNPTRISNKFPLEN-TAVSGYTHGGLLQTPPRFLSAPSFHSHQFYP 60
           MAD YFLDR  +TG+N TRI+N F LEN  AVSGY+HGGLLQTPPRFLSAPSFH+HQ YP
Sbjct: 1   MADPYFLDRSPSTGHNLTRITNNFHLENLAAVSGYSHGGLLQTPPRFLSAPSFHTHQSYP 60

Query: 61  FIQQQQPPPLLPP----PSTLRPHRSLPSQPRFHSLKKSKSTKRDKDSAAAVDRRISSRT 120
           F QQ + PPLLPP    PS LRPHRSL SQPR HSLKKSKST+++KDSA  VDRRI SRT
Sbjct: 61  FFQQNKSPPLLPPPPTTPSNLRPHRSLHSQPRSHSLKKSKSTRKEKDSATVVDRRIPSRT 120

Query: 121 FSSA-AGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAK-LNCNVEAAGADDGA 180
            SSA A KRVVRVEELEKLSGC FA+ISPPPSSLPLPKFS+RPAK L CNVEAAGADDGA
Sbjct: 121 ISSAGAAKRVVRVEELEKLSGCFFAIISPPPSSLPLPKFSMRPAKALKCNVEAAGADDGA 180

Query: 181 AAADDLRRLLRLH 187
           AAADDLRRLLRLH
Sbjct: 181 AAADDLRRLLRLH 193

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BLAST of Clc05G17320 vs. ExPASy TrEMBL
Match: A0A0A0LJ69 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G873260 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.8e-73
Identity = 153/195 (78.46%), Postives = 164/195 (84.10%), Query Frame = 0


Query: 1   MADSYFLDRPAATGYNPTRISNKFPLEN-TAVSGYTHGGLLQTPPRFLSAPSFHSHQFYP 60
           MAD YFLDR  +TG+N TRISN F LEN  AVSG++HGGLLQTPPRFLSAPSFH+HQ YP
Sbjct: 1   MADPYFLDRSPSTGHNLTRISNHFHLENLAAVSGFSHGGLLQTPPRFLSAPSFHTHQSYP 60

Query: 61  FIQQQQPPPLLPPP-----STLRPHRSLPSQPRFHSLKKSKSTKRDKDSAAAVDRRISSR 120
           F QQ + PPLLPPP     S +RPHRSLPSQPR HSLKKSKST+++KDSAA VDRRI SR
Sbjct: 61  FFQQNKSPPLLPPPPTPTQSNIRPHRSLPSQPRSHSLKKSKSTRKEKDSAAVVDRRIPSR 120

Query: 121 TFSS--AAGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAK-LNCNVEAAGADD 180
           T SS  A  KRVVRVEELEKLSGC F VISPPPSSLPLPKFS+RPAK LNCNVEA G DD
Sbjct: 121 TISSAGAGAKRVVRVEELEKLSGCFFTVISPPPSSLPLPKFSMRPAKALNCNVEAVGVDD 180

Query: 181 GAAAADDLRRLLRLH 187
           GAAAADDLRRLLRLH
Sbjct: 181 GAAAADDLRRLLRLH 195

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BLAST of Clc05G17320 vs. ExPASy TrEMBL
Match: A0A6J1CF43 (uncharacterized protein LOC111010153 OS=Momordica charantia OX=3673 GN=LOC111010153 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 3.5e-55
Identity = 142/199 (71.36%), Postives = 152/199 (76.38%), Query Frame = 0


Query: 1   MADSYFLDRPAATGYNPTR---ISN---KFPLEN-TAVSGYTHGGLLQTPPRFLSAPS-F 60
           MAD YFLDRP   GYN TR   ISN    + LEN  A +G  HGGLL+TPPRF SAPS  
Sbjct: 1   MADPYFLDRPPPAGYNQTRSLPISNNNYNYNLENIAAAAGNNHGGLLRTPPRFFSAPSII 60

Query: 61  HSHQFYPFIQQQQPPPLLPPPSTLRPHRSLPSQP-RFHSL--KKSKSTKRDKD--SAAAV 120
           H HQF+PFI Q QPPPLLPPP  LRPHRSLPSQP R HSL  KKSKS KR +   S A V
Sbjct: 61  HGHQFHPFI-QLQPPPLLPPP-ILRPHRSLPSQPARSHSLNPKKSKSAKRSEKSFSPAVV 120

Query: 121 DRRISSRTFS-SAAGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAKLNCNVEA 180
           DRR +SRT S +AA KRVV+VEEL+ LSGCLFA +SPPPSSLPLPKF LRPAKLNCNVEA
Sbjct: 121 DRRAASRTSSTAAAAKRVVKVEELD-LSGCLFA-LSPPPSSLPLPKFCLRPAKLNCNVEA 180

Query: 181 AGADDGAAAADDLRRLLRL 186
           AG DDGA  ADDLRRLLRL
Sbjct: 181 AGVDDGATTADDLRRLLRL 195

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BLAST of Clc05G17320 vs. TAIR 10
Match: AT1G20070.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; Has 26 Blast hits to 26 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-09
Identity = 64/183 (34.97%), Postives = 90/183 (49.18%), Query Frame = 0


Query: 16  NPTRISNKFPLENTAVSGYTHGGLLQTPPRFLSAPSFHSHQFYPFIQQQQPPPLLPPP-- 75
           NP R S++  L  +       GG L  P    S  S+ S   YP       PPLLP P  
Sbjct: 22  NPKRRSSRGSLSRS-------GGSLALPLNPTS--SWGSSPAYPPPHSYSQPPLLPLPRV 81

Query: 76  --STLRPHRSLPSQPRFH---SLKKSKSTKRDKDS----AAAVDRRISSRTFSSAAGKRV 135
             ST+   R   S+PR +   SL +   TK   ++    A  ++    +RT S       
Sbjct: 82  NSSTVPLQRVNSSRPRVNNNSSLNRVAQTKAISETHMKKAEFIESARLTRTGSVPIQANQ 141

Query: 136 VR--VEELEKLSGCLFAVISPPPSSLPLPKFSLRPAKLNCNVEAAGADDGAAAADDLRRL 186
           +R   E  +   G    ++SPPPSSLP+P+FS++P KL CNVEAAG  D   A +++RR+
Sbjct: 142 LRDFPEGFDGYPGPAIMLLSPPPSSLPMPRFSIKP-KLRCNVEAAGKSD--VATNNIRRV 192

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BLAST of Clc05G17320 vs. TAIR 10
Match: AT3G21570.1 (unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 6.2e-04
Identity = 26/52 (50.00%), Postives = 31/52 (59.62%), Query Frame = 0


Query: 134 SGCLFAVISPPPSSLPLPKFSLRPAKLNCNVEAAGADDGAAAADDLRRLLRL 186
           +G     +SP PSSLPLP FS + AK    V     DD  +A+ DLRRLLRL
Sbjct: 87  AGSSIFAVSPAPSSLPLPSFSKKKAK--SQVVVVSIDD--SASQDLRRLLRL 134

The following BLAST results are available for this feature:

BLAST of Clc05G17320 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0063295.1	1.6e-73	80.31	uncharacterized protein E6C27_scaffold205G001180 [Cucumis melo var. makuwa]	[more]
XP_008466665.1	4.5e-73	79.79	PREDICTED: uncharacterized protein LOC103504021 [Cucumis melo] >TYK31480.1 uncha...	[more]
KGN60046.1	7.8e-73	78.46	hypothetical protein Csa_001363 [Cucumis sativus]	[more]
KAG6608604.1	2.6e-60	77.25	hypothetical protein SDJN03_01946, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022139188.1	7.3e-55	71.36	uncharacterized protein LOC111010153 [Momordica charantia]	[more]

BLAST of Clc05G17320 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc05G17320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VBL8	7.6e-74	80.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3E771	2.2e-73	79.79	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CRS4	2.2e-73	79.79	uncharacterized protein LOC103504021 OS=Cucumis melo OX=3656 GN=LOC103504021 PE=...	[more]
A0A0A0LJ69	3.8e-73	78.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G873260 PE=4 SV=1	[more]
A0A6J1CF43	3.5e-55	71.36	uncharacterized protein LOC111010153 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]

BLAST of Clc05G17320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20070.1	1.7e-09	34.97	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G21570.1	6.2e-04	50.00	unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..79
None	No IPR available	PANTHER	PTHR33670	SPLICING FACTOR, PROLINE- AND GLUTAMINE-RICH-LIKE	coord: 125..186
None	No IPR available	PANTHER	PTHR33670:SF14	SPLICING FACTOR, PROLINE- AND GLUTAMINE-RICH-LIKE	coord: 125..186

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G17320.1	Clc05G17320.1	mRNA