Clc05G17010 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCCTTCAGCTCCGTCAAGCTCAGCCCCTGAATTTCAAATGCGCAAAAAGCCACTTAATTTATTCGCTAACGCACTAAAACGCAAGGACAGCTTCATTCAGTTCTTCGCCATGACTGGTATTTTGCTTCTAAGCTTCCGATCTTTGGGTCAGAAGTACCGTATCCACGACCTTCAAGAGGACACTACGGCTCTCAAACAAGAACAGGAAACCCTAATTGACCGTATGAACAACATCAAGCGCAGCCTCCTTCATGAGGCATCGCTCGACTCCACTGGCCTCTTCGCATCCAGGCTTCGCCTTCTCTTCAGCGAAGAAGATTAA ATGGCGCCTTCAGCTCCGTCAAGCTCAGCCCCTGAATTTCAAATGCGCAAAAAGCCACTTAATTTATTCGCTAACGCACTAAAACGCAAGGACAGCTTCATTCAGTTCTTCGCCATGACTGGTATTTTGCTTCTAAGCTTCCGATCTTTGGGTCAGAAGTACCGTATCCACGACCTTCAAGAGGACACTACGGCTCTCAAACAAGAACAGGAAACCCTAATTGACCGTATGAACAACATCAAGCGCAGCCTCCTTCATGAGGCATCGCTCGACTCCACTGGCCTCTTCGCATCCAGGCTTCGCCTTCTCTTCAGCGAAGAAGATTAA ATGGCGCCTTCAGCTCCGTCAAGCTCAGCCCCTGAATTTCAAATGCGCAAAAAGCCACTTAATTTATTCGCTAACGCACTAAAACGCAAGGACAGCTTCATTCAGTTCTTCGCCATGACTGGTATTTTGCTTCTAAGCTTCCGATCTTTGGGTCAGAAGTACCGTATCCACGACCTTCAAGAGGACACTACGGCTCTCAAACAAGAACAGGAAACCCTAATTGACCGTATGAACAACATCAAGCGCAGCCTCCTTCATGAGGCATCGCTCGACTCCACTGGCCTCTTCGCATCCAGGCTTCGCCTTCTCTTCAGCGAAGAAGATTAA MAPSAPSSSAPEFQMRKKPLNLFANALKRKDSFIQFFAMTGILLLSFRSLGQKYRIHDLQEDTTALKQEQETLIDRMNNIKRSLLHEASLDSTGLFASRLRLLFSEED Homology
BLAST of Clc05G17010 vs. NCBI nr
Match: XP_038897763.1 (uncharacterized protein LOC120085692 [Benincasa hispida]) HSP 1 Score: 195.3 bits (495), Expect = 2.7e-46 Identity = 103/108 (95.37%), Postives = 105/108 (97.22%), Query Frame = 0
BLAST of Clc05G17010 vs. NCBI nr
Match: XP_023535555.1 (uncharacterized protein LOC111796960 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 194.1 bits (492), Expect = 6.1e-46 Identity = 102/108 (94.44%), Postives = 105/108 (97.22%), Query Frame = 0
BLAST of Clc05G17010 vs. NCBI nr
Match: KAG6591237.1 (hypothetical protein SDJN03_13583, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024121.1 hypothetical protein SDJN02_12934, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 193.0 bits (489), Expect = 1.4e-45 Identity = 101/108 (93.52%), Postives = 105/108 (97.22%), Query Frame = 0
BLAST of Clc05G17010 vs. NCBI nr
Match: XP_022936518.1 (uncharacterized protein LOC111443106 [Cucurbita moschata]) HSP 1 Score: 193.0 bits (489), Expect = 1.4e-45 Identity = 101/108 (93.52%), Postives = 105/108 (97.22%), Query Frame = 0
BLAST of Clc05G17010 vs. NCBI nr
Match: XP_022975908.1 (uncharacterized protein LOC111476471 [Cucurbita maxima]) HSP 1 Score: 191.4 bits (485), Expect = 4.0e-45 Identity = 100/108 (92.59%), Postives = 105/108 (97.22%), Query Frame = 0
BLAST of Clc05G17010 vs. ExPASy TrEMBL
Match: A0A6J1FDG4 (uncharacterized protein LOC111443106 OS=Cucurbita moschata OX=3662 GN=LOC111443106 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 6.6e-46 Identity = 101/108 (93.52%), Postives = 105/108 (97.22%), Query Frame = 0
BLAST of Clc05G17010 vs. ExPASy TrEMBL
Match: A0A6J1IKL0 (uncharacterized protein LOC111476471 OS=Cucurbita maxima OX=3661 GN=LOC111476471 PE=4 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 1.9e-45 Identity = 100/108 (92.59%), Postives = 105/108 (97.22%), Query Frame = 0
BLAST of Clc05G17010 vs. ExPASy TrEMBL
Match: A0A6J1CMC7 (uncharacterized protein LOC111012778 OS=Momordica charantia OX=3673 GN=LOC111012778 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 8.1e-44 Identity = 97/108 (89.81%), Postives = 101/108 (93.52%), Query Frame = 0
BLAST of Clc05G17010 vs. ExPASy TrEMBL
Match: A0A0A0L5S3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G653420 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 2.0e-42 Identity = 95/108 (87.96%), Postives = 100/108 (92.59%), Query Frame = 0
BLAST of Clc05G17010 vs. ExPASy TrEMBL
Match: A0A1S3BW63 (uncharacterized protein LOC103493794 OS=Cucumis melo OX=3656 GN=LOC103493794 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 4.6e-39 Identity = 89/108 (82.41%), Postives = 95/108 (87.96%), Query Frame = 0
BLAST of Clc05G17010 vs. TAIR 10
Match: AT1G20430.1 (unknown protein; Has 29 Blast hits to 29 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 118.6 bits (296), Expect = 3.0e-27 Identity = 66/114 (57.89%), Postives = 78/114 (68.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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