Clc05G16130 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G16130
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	60S ribosomal protein L7a
Location	ClcChr05: 21704823 .. 21707955 (+)
RNA-Seq Expression	Clc05G16130
Synteny	Clc05G16130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTGCCCTAGCCGTCACCACTCTTTCCTGCCGCCGCTTATTTATATTTCATCCTTCCTCTCACTCTCCCTTTCACAGGCTCGCGCAAAATGGTACGCATCTCCTTTACTTCTCTCTCGTTTCGGTTTACTAGCTTAAGTTTGCTTTTGGTTTTAGATTCAGATTTCATCTTCTGTTTTCAGATGCCAACATAGAATCGATTCATGAGATACTGATCTTTCCATAACTCAACCCAACAACCCTCTTCTATGGTTGCACTTCTGATGTGTTCTTCTGGGTTTTATATTTTGAAATCTGATAACGTTGAAATCATCATGGGATTTGGTTCTAAGAGATGTTGGTCCGTCCATCTTCGGACAAAATGTGTTTTACTTACCTTTTGAAATCTCACGTGGTTTTGATAACTCAATCTGTTTGAAACACTTGATTTTGGTGTGTTTATTTGCTGTCTCGTTGCTGATGGGTGTTGAACTGCGTCTCTTGTTTAATGCTTGCTTTGTTAGGTCGAGTTGAGACCGGAGAGGCTTATTTTTTATTTTTACCATTTAGTATGGACACCCTTAGTTTTATGGCGTTTTTACCGTGTTAGGTCGAGTTGACCACGATTTCTTATCGATCTTATATTATTAATGAAGGCCTTTTTGGAATGTTCTGATCTCATTTGCGTTGTTGTGTATAATGCACCCCCGTTATAGTTATCAGTATCATGCCCAGTAGCAGAAATTTCAAGTATATTTCATAAATTTTTCATTATCAATATTATACTTCTTGCATAGGCTGTTAAGTTCAGCCCTGAACTGAAGATATATGCACTAGTGATTTATGTTAATGTTGTAAAAGTAATGGCTGCTTTACTACTGACATTGCCGCTGGTAGACTTGAATGTAGTACAATCAAGTATAAACATCATTGACCTTAACTTAAGGTCACAAGATTGTATTAACATCCCTTGTATGAATTGTAGTATTCCGAAGAGTCCACAAATGTAATAAAAAGATGATAGTCGAACCAATAGGAACAAATGATGTGAAGTTGCCTGATATTGAATTTGTTTTGAAATGCTATTTTTCTACATTCAAGCATTTTGTAAATATTGTTGTCTGCTTTATAAGTCTCTTGTTCAAACCCCTTCCCCTTCATTTTTTTATCATAATAAGTGATTCCTTCTCTTTACATTATATTTAGTTTGTACCCTTAGACGTTTGGGTTCTTGCCTGGAATGAAACACACTGATGTTATTTTATTGTATTCTTAAAAGGCACCAAAGAAGGCTGTTGGAAAAGCCTTGGCAAAAAAGAAGCCGGTGGGTGATTCTTTTCCTTGATGCTGCATATCTTCTGTTTTGTTTTTGTTCTGGTTTATTTGGTGCTTTTGTGTTTAATACAGTGTTGTGGTGTTTCCAGGAGAAGGTGGTGAACCCACTATTTGAGAAGCGTCCGAAGCAGTTTGGAATTGGTGGTGCAATTCCACCAAAGAGGGATTTGACCCGATTTGTTAAATGGCCAAAAGTTGTTCAAATTCAGAGGAAGAAGCGAATTCTTAAACAGAGGTTGAAGGTTCCACCAGCTTTGAATCAGTTCACTAAGACCCTTGACAAAAACCTTGGTAATGTCATTGAATAAGTGCTATCATGAAAAAATCTCATGGAGAATCCTAATACATTATCAGTCTTGAAATTCTTAAATTAACTGTTAGGTTTAAGATTTTTATTGCTGTATAGTTCTGTACATTTTGATTTTTTTTAACGATCATATGAGGTTCCAATGCCTTCACCTTAAGTAATTTTAACTTGTTAATTAGTTGCTTCAAAATTTTTGAATGGTTCAGTTTGGTTTCTTTGAGAAACTATATGTTGTTTGACCTTGTAAGTATATATTTTCAAAGCTGATTACGGTGAGCCATAAATTTCAGTCTTTGTAAATCTAGATGGCAGATTGATTTCTGCGTTCATTTTTGTTTGATTCCAATAGTTTTTCATGGGATTTTAGGTTTACTTTTGTCTTTATTTTGTTGATCTTGGTTTTAAGTGTTCGTTTTATGGGTTTTAAAATAATATTTGTGATATGTAGCAACAAACCTGTTCAAGATGCTTTTGAAGTATAGGCCAGAGGACAAATCACAGAAAAGGGAACGCCTTCTAAAAAGAGCTCAGGAAGAGGCTGAAGGCAAGCCACATGATGCTAAAAAACCTATTGTTGTGAAATACGGTCTCAACCATGTCACCTACCTTATTGAGCAGGTGTTAATTTTAATCCATGCATGTGAAGCTTTACTCTATTCAACAGTAAATACTGTCTGGAGAATCTGATATACTCATGACTTGAACTCCTTTTTCAGAACAAAGCACAGCTGGTTGTGATTGCCCATGATGTGGATCCGATTGAGTTGGTTGTTTGGCTCCCAGCCCTCTGCAGGAAGATGGAAATCCCATATTGCATTGTGAAGGGAAAAGCACGATTGGGAGCGGTAACTACATGATGACCCGTTATTTGATACATGACCCAACCTTTTCCAATCTTTTGAAATACATGTACCAATGCTTGTTACTTTGCCTTCCTTGACAGATTGTCCACAAAAAGACTGCATCTGTTTTGTGCTTGACGACTGTCAAGAATGAAGATAAGTTGGAGTTCAGCAGGATTCTTGAAGCCATTAAGGTGATTTACATGGAGGACATTAGAAGCCAATTATTGCACCTGATTATCTTAGTTTTATTAATATCTTTTGTTGCTGTATAGGCCAATTTCAACGACAAGTACGATGAATACAGAAAGAAATGGGGAGGTGGAATCATGGGCTCCAAGTCCCAGGCTAAAACGAAAGCCAAGGAGAAGCTGCTCGCCAAAGAAGCCGCTCAAAGAATGTCTTAGGGATCATAGTTGTCCTTTTATAATTTGCGGATTTTTCTTTAATGGGAAAAAAACCATGGAGACTTGGCTATAATTTTCAACCTCAGAATTTAGAAGTTCTGTTTACTTATGGTTTTGGTTATTTGCTGATTTCAGATCTAGTTTTGATGTTGCGCAGACCCTTCTACTTTGTTCTTTATATTACAATGTAATTTCATGGGAGATTTTTAGCAGATGAATTTATTTTTGAGTAAAATGGAAACAGAGGTTTTTTTTTTTTGTC

mRNA sequence

ATTTTGCCCTAGCCGTCACCACTCTTTCCTGCCGCCGCTTATTTATATTTCATCCTTCCTCTCACTCTCCCTTTCACAGGCTCGCGCAAAATGGCTGTTAAGTTCAGCCCTGAACTGAAGATATATGCACTAGTGATTTATGTTAATGTTGTAAAAGTAATGGCTGCTTTACTACTGACATTGCCGCTGGCACCAAAGAAGGCTGTTGGAAAAGCCTTGGCAAAAAAGAAGCCGGAGAAGGTGGTGAACCCACTATTTGAGAAGCGTCCGAAGCAGTTTGGAATTGGTGGTGCAATTCCACCAAAGAGGGATTTGACCCGATTTGTTAAATGGCCAAAAGTTGTTCAAATTCAGAGGAAGAAGCGAATTCTTAAACAGAGGTTGAAGGTTCCACCAGCTTTGAATCAGTTCACTAAGACCCTTGACAAAAACCTTGCAACAAACCTGTTCAAGATGCTTTTGAAGTATAGGCCAGAGGACAAATCACAGAAAAGGGAACGCCTTCTAAAAAGAGCTCAGGAAGAGGCTGAAGGCAAGCCACATGATGCTAAAAAACCTATTGTTGTGAAATACGGTCTCAACCATGTCACCTACCTTATTGAGCAGAACAAAGCACAGCTGGTTGTGATTGCCCATGATGTGGATCCGATTGAGTTGGTTGTTTGGCTCCCAGCCCTCTGCAGGAAGATGGAAATCCCATATTGCATTGTGAAGGGAAAAGCACGATTGGGAGCGATTGTCCACAAAAAGACTGCATCTGTTTTGTGCTTGACGACTGTCAAGAATGAAGATAAGTTGGAGTTCAGCAGGATTCTTGAAGCCATTAAGGCCAATTTCAACGACAAGTACGATGAATACAGAAAGAAATGGGGAGGTGGAATCATGGGCTCCAAGTCCCAGGCTAAAACGAAAGCCAAGGAGAAGCTGCTCGCCAAAGAAGCCGCTCAAAGAATGTCTTAGGGATCATAGTTGTCCTTTTATAATTTGCGGATTTTTCTTTAATGGGAAAAAAACCATGGAGACTTGGCTATAATTTTCAACCTCAGAATTTAGAAGTTCTGTTTACTTATGGTTTTGGTTATTTGCTGATTTCAGATCTAGTTTTGATGTTGCGCAGACCCTTCTACTTTGTTCTTTATATTACAATGTAATTTCATGGGAGATTTTTAGCAGATGAATTTATTTTTGAGTAAAATGGAAACAGAGGTTTTTTTTTTTTGTC

Coding sequence (CDS)

ATGGCTGTTAAGTTCAGCCCTGAACTGAAGATATATGCACTAGTGATTTATGTTAATGTTGTAAAAGTAATGGCTGCTTTACTACTGACATTGCCGCTGGCACCAAAGAAGGCTGTTGGAAAAGCCTTGGCAAAAAAGAAGCCGGAGAAGGTGGTGAACCCACTATTTGAGAAGCGTCCGAAGCAGTTTGGAATTGGTGGTGCAATTCCACCAAAGAGGGATTTGACCCGATTTGTTAAATGGCCAAAAGTTGTTCAAATTCAGAGGAAGAAGCGAATTCTTAAACAGAGGTTGAAGGTTCCACCAGCTTTGAATCAGTTCACTAAGACCCTTGACAAAAACCTTGCAACAAACCTGTTCAAGATGCTTTTGAAGTATAGGCCAGAGGACAAATCACAGAAAAGGGAACGCCTTCTAAAAAGAGCTCAGGAAGAGGCTGAAGGCAAGCCACATGATGCTAAAAAACCTATTGTTGTGAAATACGGTCTCAACCATGTCACCTACCTTATTGAGCAGAACAAAGCACAGCTGGTTGTGATTGCCCATGATGTGGATCCGATTGAGTTGGTTGTTTGGCTCCCAGCCCTCTGCAGGAAGATGGAAATCCCATATTGCATTGTGAAGGGAAAAGCACGATTGGGAGCGATTGTCCACAAAAAGACTGCATCTGTTTTGTGCTTGACGACTGTCAAGAATGAAGATAAGTTGGAGTTCAGCAGGATTCTTGAAGCCATTAAGGCCAATTTCAACGACAAGTACGATGAATACAGAAAGAAATGGGGAGGTGGAATCATGGGCTCCAAGTCCCAGGCTAAAACGAAAGCCAAGGAGAAGCTGCTCGCCAAAGAAGCCGCTCAAAGAATGTCTTAG

Protein sequence

MAVKFSPELKIYALVIYVNVVKVMAALLLTLPLAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKSQKRERLLKRAQEEAEGKPHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEAAQRMS

Homology

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BLAST of Clc05G16130 vs. NCBI nr
Match: XP_004148008.1 (60S ribosomal protein L7a-2 isoform X1 [Cucumis sativus] >KGN58157.1 hypothetical protein Csa_017460 [Cucumis sativus])

HSP 1 Score: 490.0 bits (1260), Expect = 1.4e-134
Identity = 252/257 (98.05%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 33  LAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR 92
           +APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR
Sbjct: 1   MAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR 60

Query: 93  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKSQKRERLLKRAQEEAEGKPHD 152
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPED+SQKRERLLKRAQEEA+GKPHD
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDRSQKRERLLKRAQEEADGKPHD 120

Query: 153 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 212
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 213 LGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 272
           LG+IVHKKTASVLCLTTVKNEDK+EFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK
Sbjct: 181 LGSIVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240

Query: 273 TKAKEKLLAKEAAQRMS 290
           TKAKEKLLAKEAAQRMS
Sbjct: 241 TKAKEKLLAKEAAQRMS 257

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BLAST of Clc05G16130 vs. NCBI nr
Match: XP_038875632.1 (60S ribosomal protein L7a-2-like [Benincasa hispida])

HSP 1 Score: 488.8 bits (1257), Expect = 3.2e-134
Identity = 253/257 (98.44%), Postives = 256/257 (99.61%), Query Frame = 0


Query: 33  LAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR 92
           +APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR
Sbjct: 1   MAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR 60

Query: 93  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKSQKRERLLKRAQEEAEGKPHD 152
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKSQKRERLLKRAQEEAEGK H+
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKSQKRERLLKRAQEEAEGKAHE 120

Query: 153 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 212
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 213 LGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 272
           LGAIVHKKTASVLCLTTVKNEDK+EFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAIVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240

Query: 273 TKAKEKLLAKEAAQRMS 290
           TKAKEKLLAKEAAQRMS
Sbjct: 241 TKAKEKLLAKEAAQRMS 257

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BLAST of Clc05G16130 vs. NCBI nr
Match: TYK23038.1 (60S ribosomal protein L7a-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 488.4 bits (1256), Expect = 4.2e-134
Identity = 254/263 (96.58%), Postives = 259/263 (98.48%), Query Frame = 0


Query: 27  LLLTLPLAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQ 86
           LL    LAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQ
Sbjct: 14  LLPFXDLAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQ 73

Query: 87  IQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKSQKRERLLKRAQEEA 146
           IQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPED+SQKRERLLKRAQEEA
Sbjct: 74  IQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDRSQKRERLLKRAQEEA 133

Query: 147 EGKPHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 206
           +GKPHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI
Sbjct: 134 DGKPHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 193

Query: 207 VKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMG 266
           VKGKARLG+IVHKKTASVLCLTTVKNEDK+EFSRILEAIKANFNDKY+EYRKKWGGGIMG
Sbjct: 194 VKGKARLGSIVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYEEYRKKWGGGIMG 253

Query: 267 SKSQAKTKAKEKLLAKEAAQRMS 290
           SKSQAKTKAKEKLLAKEAAQRMS
Sbjct: 254 SKSQAKTKAKEKLLAKEAAQRMS 276

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BLAST of Clc05G16130 vs. NCBI nr
Match: XP_008450136.1 (PREDICTED: 60S ribosomal protein L7a-2-like [Cucumis melo])

HSP 1 Score: 488.4 bits (1256), Expect = 4.2e-134
Identity = 251/257 (97.67%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 33  LAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR 92
           +APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR
Sbjct: 1   MAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR 60

Query: 93  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKSQKRERLLKRAQEEAEGKPHD 152
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPED+SQKRERLLKRAQEEA+GKPHD
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDRSQKRERLLKRAQEEADGKPHD 120

Query: 153 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 212
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 213 LGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 272
           LG+IVHKKTASVLCLTTVKNEDK+EFSRILEAIKANFNDKY+EYRKKWGGGIMGSKSQAK
Sbjct: 181 LGSIVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYEEYRKKWGGGIMGSKSQAK 240

Query: 273 TKAKEKLLAKEAAQRMS 290
           TKAKEKLLAKEAAQRMS
Sbjct: 241 TKAKEKLLAKEAAQRMS 257

[Close]

BLAST of Clc05G16130 vs. NCBI nr
Match: KAA0060275.1 (60S ribosomal protein L7a-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 488.0 bits (1255), Expect = 5.5e-134
Identity = 251/257 (97.67%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 33  LAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR 92
           +APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR
Sbjct: 15  VAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR 74

Query: 93  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKSQKRERLLKRAQEEAEGKPHD 152
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPED+SQKRERLLKRAQEEA+GKPHD
Sbjct: 75  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDRSQKRERLLKRAQEEADGKPHD 134

Query: 153 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 212
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 135 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 194

Query: 213 LGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 272
           LG+IVHKKTASVLCLTTVKNEDK+EFSRILEAIKANFNDKY+EYRKKWGGGIMGSKSQAK
Sbjct: 195 LGSIVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYEEYRKKWGGGIMGSKSQAK 254

Query: 273 TKAKEKLLAKEAAQRMS 290
           TKAKEKLLAKEAAQRMS
Sbjct: 255 TKAKEKLLAKEAAQRMS 271

[Close]

BLAST of Clc05G16130 vs. ExPASy Swiss-Prot
Match: P35685 (60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-1 PE=2 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 9.4e-121
Identity = 226/259 (87.26%), Postives = 246/259 (94.98%), Query Frame = 0


Query: 33  LAPKKAVGKA--LAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRK 92
           +APK+  G+A   AKKK EKV NPLFEKRPKQFGIGGA+PPK+DL RFVKWPKVV+IQR+
Sbjct: 1   MAPKRG-GRAPVPAKKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQ 60

Query: 93  KRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKSQKRERLLKRAQEEAEGKP 152
           +RILKQRLKVPPALNQFT+TLDKNLATNLFKMLLKYRPEDK+ K+ERLLKRAQ EAEGK 
Sbjct: 61  RRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKT 120

Query: 153 HDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGK 212
            +AKKPIVVKYGLNHVTYLIEQ+KAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK
Sbjct: 121 VEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGK 180

Query: 213 ARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQ 272
           ARLG+IVHKKTASVLCLTTVKNEDKLEFS+ILEAIKANFNDK+DE RKKWGGG+MGSKSQ
Sbjct: 181 ARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQ 240

Query: 273 AKTKAKEKLLAKEAAQRMS 290
           AKTKA+EKLLAKEAAQRM+
Sbjct: 241 AKTKAREKLLAKEAAQRMT 258

[Close]

BLAST of Clc05G16130 vs. ExPASy Swiss-Prot
Match: P0DKK7 (60S ribosomal protein L7a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-2 PE=2 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 9.4e-121
Identity = 226/259 (87.26%), Postives = 246/259 (94.98%), Query Frame = 0


Query: 33  LAPKKAVGKA--LAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRK 92
           +APK+  G+A   AKKK EKV NPLFEKRPKQFGIGGA+PPK+DL RFVKWPKVV+IQR+
Sbjct: 1   MAPKRG-GRAPVPAKKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQ 60

Query: 93  KRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKSQKRERLLKRAQEEAEGKP 152
           +RILKQRLKVPPALNQFT+TLDKNLATNLFKMLLKYRPEDK+ K+ERLLKRAQ EAEGK 
Sbjct: 61  RRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKT 120

Query: 153 HDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGK 212
            +AKKPIVVKYGLNHVTYLIEQ+KAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK
Sbjct: 121 VEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGK 180

Query: 213 ARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQ 272
           ARLG+IVHKKTASVLCLTTVKNEDKLEFS+ILEAIKANFNDK+DE RKKWGGG+MGSKSQ
Sbjct: 181 ARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQ 240

Query: 273 AKTKAKEKLLAKEAAQRMS 290
           AKTKA+EKLLAKEAAQRM+
Sbjct: 241 AKTKAREKLLAKEAAQRMT 258

[Close]

BLAST of Clc05G16130 vs. ExPASy Swiss-Prot
Match: Q9LZH9 (60S ribosomal protein L7a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7AB PE=1 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 2.1e-120
Identity = 216/257 (84.05%), Postives = 246/257 (95.72%), Query Frame = 0


Query: 33  LAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR 92
           +APKK V K  +KKKPEKV NPLFE+RPKQFGIGGA+PPK+DL+R++KWPK +++QR+KR
Sbjct: 1   MAPKKGV-KVASKKKPEKVTNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKR 60

Query: 93  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKSQKRERLLKRAQEEAEGKPHD 152
           ILKQRLKVPPALNQFTKTLDKNLAT+LFK+LLKYRPEDK+ K+ERLL +AQ EAEGKP +
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAAKKERLLNKAQAEAEGKPAE 120

Query: 153 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 212
           +KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+R
Sbjct: 121 SKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSR 180

Query: 213 LGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 272
           LGA+VH+KTA+ LCLTTVKNEDKLEFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAVVHQKTAAALCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAK 240

Query: 273 TKAKEKLLAKEAAQRMS 290
           TKAKE+++AKEAAQRM+
Sbjct: 241 TKAKERVIAKEAAQRMN 256

[Close]

BLAST of Clc05G16130 vs. ExPASy Swiss-Prot
Match: P49692 (60S ribosomal protein L7a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7AA PE=2 SV=2)

HSP 1 Score: 431.4 bits (1108), Expect = 8.0e-120
Identity = 215/257 (83.66%), Postives = 244/257 (94.94%), Query Frame = 0


Query: 33  LAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR 92
           +APKK V  A  KK  EKV NPLFE+RPKQFGIGGA+PPK+DL+R++KWPK +++QR+KR
Sbjct: 1   MAPKKGVKVAAKKKTAEKVSNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKR 60

Query: 93  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKSQKRERLLKRAQEEAEGKPHD 152
           ILKQRLKVPPALNQFTKTLDKNLAT+LFK+LLKYRPEDK+ K+ERL+K+AQ EAEGKP +
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATSLFKVLLKYRPEDKAAKKERLVKKAQAEAEGKPSE 120

Query: 153 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 212
           +KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+R
Sbjct: 121 SKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSR 180

Query: 213 LGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 272
           LGA+VH+KTAS LCLTTVKNEDKLEFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAVVHQKTASCLCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAK 240

Query: 273 TKAKEKLLAKEAAQRMS 290
           TKAKE+++AKEAAQRM+
Sbjct: 241 TKAKERVIAKEAAQRMN 257

[Close]

BLAST of Clc05G16130 vs. ExPASy Swiss-Prot
Match: Q2TBQ5 (60S ribosomal protein L7a OS=Bos taurus OX=9913 GN=RPL7A PE=2 SV=3)

HSP 1 Score: 287.7 bits (735), Expect = 1.4e-76
Identity = 150/261 (57.47%), Postives = 197/261 (75.48%), Query Frame = 0


Query: 36  KKAVGKALA-------KKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQ 95
           KKA GK +A       K++ +KVVNPLFEKRPK FGIG  I PKRDLTRFVKWP+ +++Q
Sbjct: 5   KKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQ 64

Query: 96  RKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKSQKRERLLKRAQEEAEG 155
           R++ IL +RLKVPPA+NQFT+ LD+  AT L K+  KYRPE K +K++RLL RA+++A G
Sbjct: 65  RQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAG 124

Query: 156 KPH-DAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIV 215
           K     K+P V++ G+N VT L+E  KAQLVVIAHDVDPIELVV+LPALCRKM +PYCI+
Sbjct: 125 KGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCII 184

Query: 216 KGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGS 275
           KGKARLG +VH+KT + +  T V +EDK   ++++EAI+ N+ND+YDE R+ WGG ++G 
Sbjct: 185 KGKARLGRLVHRKTCTTVAFTQVNSEDKSALAKLVEAIRTNYNDRYDEIRRHWGGNVLGP 244

Query: 276 KSQAKTKAKEKLLAKEAAQRM 289
           KS A+    EK  AKE A ++
Sbjct: 245 KSVARIAKLEKAKAKELATKL 265

[Close]

BLAST of Clc05G16130 vs. ExPASy TrEMBL
Match: A0A0A0LBU9 (60S ribosomal protein L7a OS=Cucumis sativus OX=3659 GN=Csa_3G563300 PE=3 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 7.0e-135
Identity = 252/257 (98.05%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 33  LAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR 92
           +APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR
Sbjct: 1   MAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR 60

Query: 93  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKSQKRERLLKRAQEEAEGKPHD 152
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPED+SQKRERLLKRAQEEA+GKPHD
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDRSQKRERLLKRAQEEADGKPHD 120

Query: 153 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 212
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 213 LGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 272
           LG+IVHKKTASVLCLTTVKNEDK+EFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK
Sbjct: 181 LGSIVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240

Query: 273 TKAKEKLLAKEAAQRMS 290
           TKAKEKLLAKEAAQRMS
Sbjct: 241 TKAKEKLLAKEAAQRMS 257

[Close]

BLAST of Clc05G16130 vs. ExPASy TrEMBL
Match: A0A5D3DHV9 (60S ribosomal protein L7a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3819G00040 PE=3 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 2.0e-134
Identity = 254/263 (96.58%), Postives = 259/263 (98.48%), Query Frame = 0


Query: 27  LLLTLPLAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQ 86
           LL    LAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQ
Sbjct: 14  LLPFXDLAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQ 73

Query: 87  IQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKSQKRERLLKRAQEEA 146
           IQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPED+SQKRERLLKRAQEEA
Sbjct: 74  IQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDRSQKRERLLKRAQEEA 133

Query: 147 EGKPHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 206
           +GKPHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI
Sbjct: 134 DGKPHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 193

Query: 207 VKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMG 266
           VKGKARLG+IVHKKTASVLCLTTVKNEDK+EFSRILEAIKANFNDKY+EYRKKWGGGIMG
Sbjct: 194 VKGKARLGSIVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYEEYRKKWGGGIMG 253

Query: 267 SKSQAKTKAKEKLLAKEAAQRMS 290
           SKSQAKTKAKEKLLAKEAAQRMS
Sbjct: 254 SKSQAKTKAKEKLLAKEAAQRMS 276

[Close]

BLAST of Clc05G16130 vs. ExPASy TrEMBL
Match: A0A1S3BMZ4 (60S ribosomal protein L7a OS=Cucumis melo OX=3656 GN=LOC103491810 PE=3 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 2.0e-134
Identity = 251/257 (97.67%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 33  LAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR 92
           +APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR
Sbjct: 1   MAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR 60

Query: 93  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKSQKRERLLKRAQEEAEGKPHD 152
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPED+SQKRERLLKRAQEEA+GKPHD
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDRSQKRERLLKRAQEEADGKPHD 120

Query: 153 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 212
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 213 LGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 272
           LG+IVHKKTASVLCLTTVKNEDK+EFSRILEAIKANFNDKY+EYRKKWGGGIMGSKSQAK
Sbjct: 181 LGSIVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYEEYRKKWGGGIMGSKSQAK 240

Query: 273 TKAKEKLLAKEAAQRMS 290
           TKAKEKLLAKEAAQRMS
Sbjct: 241 TKAKEKLLAKEAAQRMS 257

[Close]

BLAST of Clc05G16130 vs. ExPASy TrEMBL
Match: A0A5A7V325 (60S ribosomal protein L7a OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00430 PE=3 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 2.7e-134
Identity = 251/257 (97.67%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 33  LAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR 92
           +APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR
Sbjct: 15  VAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR 74

Query: 93  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKSQKRERLLKRAQEEAEGKPHD 152
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPED+SQKRERLLKRAQEEA+GKPHD
Sbjct: 75  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDRSQKRERLLKRAQEEADGKPHD 134

Query: 153 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 212
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 135 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 194

Query: 213 LGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 272
           LG+IVHKKTASVLCLTTVKNEDK+EFSRILEAIKANFNDKY+EYRKKWGGGIMGSKSQAK
Sbjct: 195 LGSIVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYEEYRKKWGGGIMGSKSQAK 254

Query: 273 TKAKEKLLAKEAAQRMS 290
           TKAKEKLLAKEAAQRMS
Sbjct: 255 TKAKEKLLAKEAAQRMS 271

[Close]

BLAST of Clc05G16130 vs. ExPASy TrEMBL
Match: A0A6J1I354 (60S ribosomal protein L7a OS=Cucurbita maxima OX=3661 GN=LOC111469157 PE=3 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.7e-133
Identity = 249/257 (96.89%), Postives = 255/257 (99.22%), Query Frame = 0


Query: 33  LAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR 92
           +APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGA+PPKRDLTRFVKWPK VQIQRKKR
Sbjct: 1   MAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60

Query: 93  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKSQKRERLLKRAQEEAEGKPHD 152
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDK+QKRERLLKRAQEEAEGK HD
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHD 120

Query: 153 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 212
           AKKPIV+KYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVIKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 213 LGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 272
           LGAIVHKKTASVLCLTTVKNEDK+EFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAIVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240

Query: 273 TKAKEKLLAKEAAQRMS 290
           TKAKE+LLAKEAAQRMS
Sbjct: 241 TKAKERLLAKEAAQRMS 257

[Close]

BLAST of Clc05G16130 vs. TAIR 10
Match: AT3G62870.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 433.3 bits (1113), Expect = 1.5e-121
Identity = 216/257 (84.05%), Postives = 246/257 (95.72%), Query Frame = 0


Query: 33  LAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR 92
           +APKK V K  +KKKPEKV NPLFE+RPKQFGIGGA+PPK+DL+R++KWPK +++QR+KR
Sbjct: 1   MAPKKGV-KVASKKKPEKVTNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKR 60

Query: 93  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKSQKRERLLKRAQEEAEGKPHD 152
           ILKQRLKVPPALNQFTKTLDKNLAT+LFK+LLKYRPEDK+ K+ERLL +AQ EAEGKP +
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAAKKERLLNKAQAEAEGKPAE 120

Query: 153 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 212
           +KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+R
Sbjct: 121 SKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSR 180

Query: 213 LGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 272
           LGA+VH+KTA+ LCLTTVKNEDKLEFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAVVHQKTAAALCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAK 240

Query: 273 TKAKEKLLAKEAAQRMS 290
           TKAKE+++AKEAAQRM+
Sbjct: 241 TKAKERVIAKEAAQRMN 256

[Close]

BLAST of Clc05G16130 vs. TAIR 10
Match: AT2G47610.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 431.4 bits (1108), Expect = 5.7e-121
Identity = 215/257 (83.66%), Postives = 244/257 (94.94%), Query Frame = 0


Query: 33  LAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR 92
           +APKK V  A  KK  EKV NPLFE+RPKQFGIGGA+PPK+DL+R++KWPK +++QR+KR
Sbjct: 1   MAPKKGVKVAAKKKTAEKVSNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKR 60

Query: 93  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKSQKRERLLKRAQEEAEGKPHD 152
           ILKQRLKVPPALNQFTKTLDKNLAT+LFK+LLKYRPEDK+ K+ERL+K+AQ EAEGKP +
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATSLFKVLLKYRPEDKAAKKERLVKKAQAEAEGKPSE 120

Query: 153 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 212
           +KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+R
Sbjct: 121 SKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSR 180

Query: 213 LGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 272
           LGA+VH+KTAS LCLTTVKNEDKLEFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAVVHQKTASCLCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAK 240

Query: 273 TKAKEKLLAKEAAQRMS 290
           TKAKE+++AKEAAQRM+
Sbjct: 241 TKAKERVIAKEAAQRMN 257

[Close]

BLAST of Clc05G16130 vs. TAIR 10
Match: AT4G22380.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 43.5 bits (101), Expect = 3.3e-04
Identity = 22/79 (27.85%), Postives = 37/79 (46.84%), Query Frame = 0


Query: 159 VKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVH 218
           +K G N  T  + +  ++ VV+A D +P+E+++ LP L     +PY  V  K  LG    
Sbjct: 35  LKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACG 94

Query: 219 KKTASVLCLTTVKNEDKLE 238
                + C  T     +L+
Sbjct: 95  VTRPVIACSVTSNEASQLK 113

[Close]

BLAST of Clc05G16130 vs. TAIR 10
Match: AT4G12600.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 43.5 bits (101), Expect = 3.3e-04
Identity = 21/79 (26.58%), Postives = 37/79 (46.84%), Query Frame = 0


Query: 159 VKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVH 218
           +K G N  T  + +  ++ +V+A D +P+E+++ LP L     +PY  V  K  LG    
Sbjct: 35  LKKGANEATKTLNRGISEFIVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACD 94

Query: 219 KKTASVLCLTTVKNEDKLE 238
                + C  T     +L+
Sbjct: 95  VTRPVIACSVTSNEASQLK 113

[Close]

BLAST of Clc05G16130 vs. TAIR 10
Match: AT5G20160.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 43.5 bits (101), Expect = 3.3e-04
Identity = 22/79 (27.85%), Postives = 37/79 (46.84%), Query Frame = 0


Query: 159 VKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVH 218
           +K G N  T  + +  ++ VV+A D +P+E+++ LP L     +PY  V  K  LG    
Sbjct: 35  LKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACG 94

Query: 219 KKTASVLCLTTVKNEDKLE 238
                + C  T     +L+
Sbjct: 95  VTRPVIACSVTSNEASQLK 113

The following BLAST results are available for this feature:

BLAST of Clc05G16130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148008.1	1.4e-134	98.05	60S ribosomal protein L7a-2 isoform X1 [Cucumis sativus] >KGN58157.1 hypothetica...	[more]
XP_038875632.1	3.2e-134	98.44	60S ribosomal protein L7a-2-like [Benincasa hispida]	[more]
TYK23038.1	4.2e-134	96.58	60S ribosomal protein L7a-2-like [Cucumis melo var. makuwa]	[more]
XP_008450136.1	4.2e-134	97.67	PREDICTED: 60S ribosomal protein L7a-2-like [Cucumis melo]	[more]
KAA0060275.1	5.5e-134	97.67	60S ribosomal protein L7a-2-like [Cucumis melo var. makuwa]	[more]

BLAST of Clc05G16130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P35685	9.4e-121	87.26	60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-1 ...	[more]
P0DKK7	9.4e-121	87.26	60S ribosomal protein L7a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-2 ...	[more]
Q9LZH9	2.1e-120	84.05	60S ribosomal protein L7a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7AB PE=1 SV=1	[more]
P49692	8.0e-120	83.66	60S ribosomal protein L7a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7AA PE=2 SV=2	[more]
Q2TBQ5	1.4e-76	57.47	60S ribosomal protein L7a OS=Bos taurus OX=9913 GN=RPL7A PE=2 SV=3	[more]

BLAST of Clc05G16130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBU9	7.0e-135	98.05	60S ribosomal protein L7a OS=Cucumis sativus OX=3659 GN=Csa_3G563300 PE=3 SV=1	[more]
A0A5D3DHV9	2.0e-134	96.58	60S ribosomal protein L7a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3BMZ4	2.0e-134	97.67	60S ribosomal protein L7a OS=Cucumis melo OX=3656 GN=LOC103491810 PE=3 SV=1	[more]
A0A5A7V325	2.7e-134	97.67	60S ribosomal protein L7a OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A6J1I354	1.7e-133	96.89	60S ribosomal protein L7a OS=Cucurbita maxima OX=3661 GN=LOC111469157 PE=3 SV=1	[more]

BLAST of Clc05G16130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62870.1	1.5e-121	84.05	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT2G47610.1	5.7e-121	83.66	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT4G22380.1	3.3e-04	27.85	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT4G12600.1	3.3e-04	26.58	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT5G20160.1	3.3e-04	27.85	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018492	Ribosomal protein L7Ae/L8/Nhp2 family	PRINTS	PR00881	L7ARS6FAMILY	coord: 178..191 score: 71.43 coord: 159..173 score: 45.76 coord: 194..204 score: 64.46 coord: 204..218 score: 56.36
IPR001921	Ribosomal protein L7A/L8	PRINTS	PR00882	RIBOSOMALL7A	coord: 155..175 score: 62.77 coord: 121..134 score: 59.09 coord: 248..268 score: 68.4 coord: 60..77 score: 72.73 coord: 77..94 score: 60.61 coord: 216..240 score: 47.27 coord: 97..116 score: 74.09
IPR029064	50S ribosomal protein L30e-like	GENE3D	3.30.1330.30		coord: 81..264 e-value: 1.6E-81 score: 274.4
IPR029064	50S ribosomal protein L30e-like	SUPERFAMILY	55315	L30e-like	coord: 119..260
IPR004038	Ribosomal protein L7Ae/L30e/S12e/Gadd45	PFAM	PF01248	Ribosomal_L7Ae	coord: 146..236 e-value: 9.8E-26 score: 89.3
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 21..287
None	No IPR available	PANTHER	PTHR23105:SF168	BNAA03G47020D PROTEIN	coord: 21..287
IPR004037	Ribosomal protein L7Ae conserved site	PROSITE	PS01082	RIBOSOMAL_L7AE	coord: 197..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G16130.2	Clc05G16130.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003723	RNA binding