Clc05G16100 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G16100
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Glutaredoxin
Location	ClcChr05: 21526703 .. 21527341 (+)
RNA-Seq Expression	Clc05G16100
Synteny	Clc05G16100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCGTCTTCTTCAATCCAACTTGCCTTTTCTTTTTACCTTCTTTTGTCTTTCAAAATATCAGCAACCATTGATAACCAGAAAATGCAATACCAAGCACAACAACAATACGGAACTTCCTCTTCTTCTTCCTCCTCCTATTCCGTCAACGATCCGTTGCGTCGGATAGAGCGTATGGCAGCCGAGAACGCTGTGGTCATGTTTAGCATGACTTCATGCTGCATGTGCCACGCCGTCAAACGTCTCTTTTGTGGAATGGGAGTTAACCCTACAGTGTACGAGCTGGACGAGGACCCGAGAGGAAAAGAGCTAGAGAAAGCCTTGATGCGGCTAATGGGAAGCTCCTCTGCCGTCCCCGCTGTCTTCATCGGCGGGAAACTTGTTGGCTCTATGGATAGAGTTATGGCCTCTCATATCAATGGCTCTCTTGTTCCTCTCCTCAAAAACGCTGGCGCCCTTTGGCTCTAAAACTTCGACCTATGCGTCTGGATAAAATTTTATTACTGTACGACAGTCTTCTTGACCAATTGAGATATGTTGGTGTTTGCAGTAAAGAGAAAAAAAAAAATGTGAATTAAGAAAGTTGAAAAAAGAGGAAGAGGAGAGTGTTGGGTACTTGTAATAATTAGCTCCCTCCTCTG

mRNA sequence

TTCGTCTTCTTCAATCCAACTTGCCTTTTCTTTTTACCTTCTTTTGTCTTTCAAAATATCAGCAACCATTGATAACCAGAAAATGCAATACCAAGCACAACAACAATACGGAACTTCCTCTTCTTCTTCCTCCTCCTATTCCGTCAACGATCCGTTGCGTCGGATAGAGCGTATGGCAGCCGAGAACGCTGTGGTCATGTTTAGCATGACTTCATGCTGCATGTGCCACGCCGTCAAACGTCTCTTTTGTGGAATGGGAGTTAACCCTACAGTGTACGAGCTGGACGAGGACCCGAGAGGAAAAGAGCTAGAGAAAGCCTTGATGCGGCTAATGGGAAGCTCCTCTGCCGTCCCCGCTGTCTTCATCGGCGGGAAACTTGTTGGCTCTATGGATAGAGTTATGGCCTCTCATATCAATGGCTCTCTTGTTCCTCTCCTCAAAAACGCTGGCGCCCTTTGGCTCTAAAACTTCGACCTATGCGTCTGGATAAAATTTTATTACTGTACGACAGTCTTCTTGACCAATTGAGATATGTTGGTGTTTGCAGTAAAGAGAAAAAAAAAAATGTGAATTAAGAAAGTTGAAAAAAGAGGAAGAGGAGAGTGTTGGGTACTTGTAATAATTAGCTCCCTCCTCTG

Coding sequence (CDS)

ATGCAATACCAAGCACAACAACAATACGGAACTTCCTCTTCTTCTTCCTCCTCCTATTCCGTCAACGATCCGTTGCGTCGGATAGAGCGTATGGCAGCCGAGAACGCTGTGGTCATGTTTAGCATGACTTCATGCTGCATGTGCCACGCCGTCAAACGTCTCTTTTGTGGAATGGGAGTTAACCCTACAGTGTACGAGCTGGACGAGGACCCGAGAGGAAAAGAGCTAGAGAAAGCCTTGATGCGGCTAATGGGAAGCTCCTCTGCCGTCCCCGCTGTCTTCATCGGCGGGAAACTTGTTGGCTCTATGGATAGAGTTATGGCCTCTCATATCAATGGCTCTCTTGTTCCTCTCCTCAAAAACGCTGGCGCCCTTTGGCTCTAA

Protein sequence

MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL

Homology

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BLAST of Clc05G16100 vs. NCBI nr
Match: XP_008450140.1 (PREDICTED: glutaredoxin-C1-like [Cucumis melo] >KAA0060281.1 glutaredoxin-C1-like [Cucumis melo var. makuwa])

HSP 1 Score: 238.8 bits (608), Expect = 2.6e-59
Identity = 119/127 (93.70%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 1   MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYG S+SSSSSYSVNDP+RRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASASSSSSYSVNDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60

Query: 61  NPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLVGSMDRVMASHINGSLVPLLK 120
             TVYELDEDPRGKE+EKALMRLMGSSSAVPAVFIGGKL+GSMDRVMASHINGSLVPLLK
Sbjct: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLK 120

Query: 121 NAGALWL 128
           +AGALWL
Sbjct: 121 SAGALWL 127

[Close]

BLAST of Clc05G16100 vs. NCBI nr
Match: XP_038874416.1 (glutaredoxin-C1-like [Benincasa hispida])

HSP 1 Score: 237.7 bits (605), Expect = 5.7e-59
Identity = 122/127 (96.06%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYG SSSSSSSYS ND LRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYG-SSSSSSSYSANDSLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60

Query: 61  NPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLVGSMDRVMASHINGSLVPLLK 120
           NPTVYELDEDPRGKE+EKALMRLMGSSSAVPAVFIGGKLVGSMDRVM SHINGSLVPLLK
Sbjct: 61  NPTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLVGSMDRVMVSHINGSLVPLLK 120

Query: 121 NAGALWL 128
           NAGALWL
Sbjct: 121 NAGALWL 126

[Close]

BLAST of Clc05G16100 vs. NCBI nr
Match: XP_004148005.1 (glutaredoxin-C1 [Cucumis sativus])

HSP 1 Score: 237.3 bits (604), Expect = 7.4e-59
Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYG S+SSSSSYS NDP+RRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60

Query: 61  NPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLVGSMDRVMASHINGSLVPLLK 120
             TVYELDEDPRGKE+EKALMRLMGSSSAVPAVFIGGKL+GSMDRVMASHINGSLVPLLK
Sbjct: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLK 120

Query: 121 NAGALWL 128
           +AGALWL
Sbjct: 121 SAGALWL 127

[Close]

BLAST of Clc05G16100 vs. NCBI nr
Match: XP_022935242.1 (glutaredoxin-C1-like [Cucurbita moschata])

HSP 1 Score: 221.5 bits (563), Expect = 4.2e-54
Identity = 116/129 (89.92%), Postives = 120/129 (93.02%), Query Frame = 0


Query: 1   MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYG SSSSSS      P+RRIERMAAENAVVMFS++SCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASSSSSS------PMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGV 60

Query: 61  NPTVYELDEDPRGKELEKALMRLMG--SSSAVPAVFIGGKLVGSMDRVMASHINGSLVPL 120
           NPTVYELDEDPRGKE+EKALMRLMG  SSSAVPAVFIGGKLVGSMDRVMASHINGSLVPL
Sbjct: 61  NPTVYELDEDPRGKEIEKALMRLMGSSSSSAVPAVFIGGKLVGSMDRVMASHINGSLVPL 120

Query: 121 LKNAGALWL 128
           LKNAGALWL
Sbjct: 121 LKNAGALWL 123

[Close]

BLAST of Clc05G16100 vs. NCBI nr
Match: XP_023528287.1 (glutaredoxin-C1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.5 bits (563), Expect = 4.2e-54
Identity = 116/129 (89.92%), Postives = 120/129 (93.02%), Query Frame = 0


Query: 1   MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYG SSSSSS      P+RRIERMAAENAVVMFS++SCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASSSSSS------PMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGV 60

Query: 61  NPTVYELDEDPRGKELEKALMRLMGSSS--AVPAVFIGGKLVGSMDRVMASHINGSLVPL 120
           NPTVYELDEDPRGKE+EKALMRLMGSSS  AVPAVFIGGKLVGSMDRVMASHINGSLVPL
Sbjct: 61  NPTVYELDEDPRGKEIEKALMRLMGSSSSAAVPAVFIGGKLVGSMDRVMASHINGSLVPL 120

Query: 121 LKNAGALWL 128
           LKNAGALWL
Sbjct: 121 LKNAGALWL 123

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BLAST of Clc05G16100 vs. ExPASy Swiss-Prot
Match: Q6K609 (Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.8e-39
Identity = 86/135 (63.70%), Postives = 106/135 (78.52%), Query Frame = 0


Query: 1   MQY-QAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMG 60
           MQY  A +Q     +++ +  V   + R+ER+A+E+AVV+FS++SCCMCHAVKRLFCGMG
Sbjct: 1   MQYGAAAEQAWYMPAAAPAPMVESAVARVERLASESAVVVFSVSSCCMCHAVKRLFCGMG 60

Query: 61  VNPTVYELDEDPRGKELEKALMRLMG-------SSSAVPAVFIGGKLVGSMDRVMASHIN 120
           V+PTV+ELD DPRG+ELE+AL RL+G       S   VP VFIGGKLVG+MDRVMA+HIN
Sbjct: 61  VHPTVHELDLDPRGRELERALARLVGYGGPAAASPPVVPVVFIGGKLVGAMDRVMAAHIN 120

Query: 121 GSLVPLLKNAGALWL 128
           GSLVPLLK AGALWL
Sbjct: 121 GSLVPLLKEAGALWL 135

[Close]

BLAST of Clc05G16100 vs. ExPASy Swiss-Prot
Match: Q0JDM4 (Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2)

HSP 1 Score: 161.8 bits (408), Expect = 5.2e-39
Identity = 84/135 (62.22%), Postives = 107/135 (79.26%), Query Frame = 0


Query: 1   MQYQA----QQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFC 60
           MQY A    Q  Y  +++   + +      R+ER+A+E+AVV+FS++SCCMCHAVKRLFC
Sbjct: 1   MQYGAAAAEQAWYMPAAAMVVAAAAETAAERVERLASESAVVVFSVSSCCMCHAVKRLFC 60

Query: 61  GMGVNPTVYELDEDPRGKELEKALMRLMG----SSSAVPAVFIGGKLVGSMDRVMASHIN 120
           GMGV+P V+ELD DPRG++LE+AL RL+G    +++AVP VFIGGKLVG+MDRVMA+HIN
Sbjct: 61  GMGVHPAVHELDLDPRGRDLERALARLVGAGGAAAAAVPVVFIGGKLVGAMDRVMAAHIN 120

Query: 121 GSLVPLLKNAGALWL 128
           GSLVPLLK AGALWL
Sbjct: 121 GSLVPLLKEAGALWL 135

[Close]

BLAST of Clc05G16100 vs. ExPASy Swiss-Prot
Match: Q7G8Y5 (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 6.8e-39
Identity = 74/101 (73.27%), Postives = 90/101 (89.11%), Query Frame = 0


Query: 27  RIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGS 86
           R+ R+AA+ AVV+FSM+SCCMCH V RLFC +GVNPTV ELDEDPRGKE+EKAL RL+G 
Sbjct: 3   RVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLLGR 62

Query: 87  SSAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL 128
           S AVPAVFIGG+LVGS D+VM+ H++G+LVPLL+NAGALW+
Sbjct: 63  SPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLRNAGALWV 103

[Close]

BLAST of Clc05G16100 vs. ExPASy Swiss-Prot
Match: Q8LF89 (Glutaredoxin-C8 OS=Arabidopsis thaliana OX=3702 GN=GRXC8 PE=1 SV=2)

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-35
Identity = 81/140 (57.86%), Postives = 105/140 (75.00%), Query Frame = 0


Query: 1   MQYQAQQQYGTSSSSSSSYSVN------DPLRRIERMAAENAVVMFSMTSCCMCHAVKRL 60
           MQY+ + +   S +++S    N      + L +IE MAAENAVV+FS+++CCMCHA+KRL
Sbjct: 1   MQYKTETRGSLSYNNNSKVMNNMNVFPSETLAKIESMAAENAVVIFSVSTCCMCHAIKRL 60

Query: 61  FCGMGVNPTVYELDEDPRGKELEKALMRLMGSSS-------AVPAVFIGGKLVGSMDRVM 120
           F GMGV+P V+ELD  P G E+ +AL+RL+G SS       A+P VFIGGK+VG+M+RVM
Sbjct: 61  FRGMGVSPAVHELDLLPYGVEIHRALLRLLGCSSGGATSPGALPVVFIGGKMVGAMERVM 120

Query: 121 ASHINGSLVPLLKNAGALWL 128
           ASHINGSLVPLLK+AGALWL
Sbjct: 121 ASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of Clc05G16100 vs. ExPASy Swiss-Prot
Match: Q96305 (Glutaredoxin-C7 OS=Arabidopsis thaliana OX=3702 GN=GRXC7 PE=1 SV=2)

HSP 1 Score: 145.6 bits (366), Expect = 3.9e-34
Identity = 79/137 (57.66%), Postives = 103/137 (75.18%), Query Frame = 0


Query: 1   MQYQAQQQYGTSSSSSSSYS-----VNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLF 60
           MQYQ  + +G+   SS  +       +  L RIE +A+E+AVV+FS+++CCMCHAVK LF
Sbjct: 1   MQYQT-ESWGSYKMSSLGFGGLGMVADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLF 60

Query: 61  CGMGVNPTVYELDEDPRGKELEKALMRLMG-----SSSAVPAVFIGGKLVGSMDRVMASH 120
            GMGV+P V+ELD  P G ++++AL+RL+G     S  ++P VFIGGKLVG+MDRVMASH
Sbjct: 61  RGMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASH 120

Query: 121 INGSLVPLLKNAGALWL 128
           INGSLVPLLK+AGALWL
Sbjct: 121 INGSLVPLLKDAGALWL 136

[Close]

BLAST of Clc05G16100 vs. ExPASy TrEMBL
Match: A0A5A7V3D7 (Glutaredoxin-C1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00530 PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.2e-59
Identity = 119/127 (93.70%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 1   MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYG S+SSSSSYSVNDP+RRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASASSSSSYSVNDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60

Query: 61  NPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLVGSMDRVMASHINGSLVPLLK 120
             TVYELDEDPRGKE+EKALMRLMGSSSAVPAVFIGGKL+GSMDRVMASHINGSLVPLLK
Sbjct: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLK 120

Query: 121 NAGALWL 128
           +AGALWL
Sbjct: 121 SAGALWL 127

[Close]

BLAST of Clc05G16100 vs. ExPASy TrEMBL
Match: A0A1S3BP86 (glutaredoxin-C1-like OS=Cucumis melo OX=3656 GN=LOC103491814 PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.2e-59
Identity = 119/127 (93.70%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 1   MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYG S+SSSSSYSVNDP+RRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASASSSSSYSVNDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60

Query: 61  NPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLVGSMDRVMASHINGSLVPLLK 120
             TVYELDEDPRGKE+EKALMRLMGSSSAVPAVFIGGKL+GSMDRVMASHINGSLVPLLK
Sbjct: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLK 120

Query: 121 NAGALWL 128
           +AGALWL
Sbjct: 121 SAGALWL 127

[Close]

BLAST of Clc05G16100 vs. ExPASy TrEMBL
Match: A0A0A0LB28 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G563270 PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 3.6e-59
Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYG S+SSSSSYS NDP+RRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60

Query: 61  NPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLVGSMDRVMASHINGSLVPLLK 120
             TVYELDEDPRGKE+EKALMRLMGSSSAVPAVFIGGKL+GSMDRVMASHINGSLVPLLK
Sbjct: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLK 120

Query: 121 NAGALWL 128
           +AGALWL
Sbjct: 121 SAGALWL 127

[Close]

BLAST of Clc05G16100 vs. ExPASy TrEMBL
Match: A0A6J1F512 (glutaredoxin-C1-like OS=Cucurbita moschata OX=3662 GN=LOC111442181 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.0e-54
Identity = 116/129 (89.92%), Postives = 120/129 (93.02%), Query Frame = 0


Query: 1   MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYG SSSSSS      P+RRIERMAAENAVVMFS++SCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASSSSSS------PMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGV 60

Query: 61  NPTVYELDEDPRGKELEKALMRLMG--SSSAVPAVFIGGKLVGSMDRVMASHINGSLVPL 120
           NPTVYELDEDPRGKE+EKALMRLMG  SSSAVPAVFIGGKLVGSMDRVMASHINGSLVPL
Sbjct: 61  NPTVYELDEDPRGKEIEKALMRLMGSSSSSAVPAVFIGGKLVGSMDRVMASHINGSLVPL 120

Query: 121 LKNAGALWL 128
           LKNAGALWL
Sbjct: 121 LKNAGALWL 123

[Close]

BLAST of Clc05G16100 vs. ExPASy TrEMBL
Match: A0A6J1J7B3 (glutaredoxin-C1-like OS=Cucurbita maxima OX=3661 GN=LOC111482029 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.5e-54
Identity = 115/128 (89.84%), Postives = 120/128 (93.75%), Query Frame = 0


Query: 1   MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYG SSSSSS      P+RRIE+MAAENAVVMFS++SCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASSSSSS------PMRRIEQMAAENAVVMFSISSCCMCHAVKRLFCGMGV 60

Query: 61  NPTVYELDEDPRGKELEKALMRLMGSSS-AVPAVFIGGKLVGSMDRVMASHINGSLVPLL 120
           NPTVYELDEDPRGKE+EKALMRLMGSSS AVPAVFIGGKLVGSMDRVMASHINGSLVPLL
Sbjct: 61  NPTVYELDEDPRGKEIEKALMRLMGSSSAAVPAVFIGGKLVGSMDRVMASHINGSLVPLL 120

Query: 121 KNAGALWL 128
           KNAGALWL
Sbjct: 121 KNAGALWL 122

[Close]

BLAST of Clc05G16100 vs. TAIR 10
Match: AT5G14070.1 (Thioredoxin superfamily protein )

HSP 1 Score: 150.6 bits (379), Expect = 8.5e-37
Identity = 81/140 (57.86%), Postives = 105/140 (75.00%), Query Frame = 0


Query: 1   MQYQAQQQYGTSSSSSSSYSVN------DPLRRIERMAAENAVVMFSMTSCCMCHAVKRL 60
           MQY+ + +   S +++S    N      + L +IE MAAENAVV+FS+++CCMCHA+KRL
Sbjct: 1   MQYKTETRGSLSYNNNSKVMNNMNVFPSETLAKIESMAAENAVVIFSVSTCCMCHAIKRL 60

Query: 61  FCGMGVNPTVYELDEDPRGKELEKALMRLMGSSS-------AVPAVFIGGKLVGSMDRVM 120
           F GMGV+P V+ELD  P G E+ +AL+RL+G SS       A+P VFIGGK+VG+M+RVM
Sbjct: 61  FRGMGVSPAVHELDLLPYGVEIHRALLRLLGCSSGGATSPGALPVVFIGGKMVGAMERVM 120

Query: 121 ASHINGSLVPLLKNAGALWL 128
           ASHINGSLVPLLK+AGALWL
Sbjct: 121 ASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of Clc05G16100 vs. TAIR 10
Match: AT3G02000.1 (Thioredoxin superfamily protein )

HSP 1 Score: 145.6 bits (366), Expect = 2.7e-35
Identity = 79/137 (57.66%), Postives = 103/137 (75.18%), Query Frame = 0


Query: 1   MQYQAQQQYGTSSSSSSSYS-----VNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLF 60
           MQYQ  + +G+   SS  +       +  L RIE +A+E+AVV+FS+++CCMCHAVK LF
Sbjct: 1   MQYQT-ESWGSYKMSSLGFGGLGMVADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLF 60

Query: 61  CGMGVNPTVYELDEDPRGKELEKALMRLMG-----SSSAVPAVFIGGKLVGSMDRVMASH 120
            GMGV+P V+ELD  P G ++++AL+RL+G     S  ++P VFIGGKLVG+MDRVMASH
Sbjct: 61  RGMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASH 120

Query: 121 INGSLVPLLKNAGALWL 128
           INGSLVPLLK+AGALWL
Sbjct: 121 INGSLVPLLKDAGALWL 136

[Close]

BLAST of Clc05G16100 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 125.9 bits (315), Expect = 2.2e-29
Identity = 60/103 (58.25%), Postives = 78/103 (75.73%), Query Frame = 0


Query: 25  LRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLM 84
           +  +++M +E +VV+FS  SCCM H +K LF  +GVNPT+YELDE  RGKE+E AL +L 
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQL- 60

Query: 85  GSSSAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL 128
           G S  VP VFIGG+LVG  ++VM+ H+N SLVP+LK AGALWL
Sbjct: 61  GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Clc05G16100 vs. TAIR 10
Match: AT5G18600.1 (Thioredoxin superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 2.9e-29
Identity = 59/100 (59.00%), Postives = 75/100 (75.00%), Query Frame = 0


Query: 28  IERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSS 87
           I +M  E  VV++S +SCCM H +K L C  G NP VYELDE  RG+E+E+AL+RL G S
Sbjct: 4   ITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRL-GCS 63

Query: 88  SAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL 128
            AVP VFIGG+LVG  + VM+ H+NGSL+P+LK AGALW+
Sbjct: 64  PAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]

BLAST of Clc05G16100 vs. TAIR 10
Match: AT4G15670.1 (Thioredoxin superfamily protein )

HSP 1 Score: 124.4 bits (311), Expect = 6.5e-29
Identity = 57/103 (55.34%), Postives = 79/103 (76.70%), Query Frame = 0


Query: 25  LRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLM 84
           + ++++M +E ++V+FS  SCCM H +K LF  +GVNPT+YELDE  RGKE+E+AL +L 
Sbjct: 1   MEKLQKMTSEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEQALAQL- 60

Query: 85  GSSSAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL 128
           G S  VP VFIGG+LVG  ++VM+ H+N SL+P+LK  GALWL
Sbjct: 61  GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRVGALWL 102

The following BLAST results are available for this feature:

BLAST of Clc05G16100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450140.1	2.6e-59	93.70	PREDICTED: glutaredoxin-C1-like [Cucumis melo] >KAA0060281.1 glutaredoxin-C1-lik...	[more]
XP_038874416.1	5.7e-59	96.06	glutaredoxin-C1-like [Benincasa hispida]	[more]
XP_004148005.1	7.4e-59	92.91	glutaredoxin-C1 [Cucumis sativus]	[more]
XP_022935242.1	4.2e-54	89.92	glutaredoxin-C1-like [Cucurbita moschata]	[more]
XP_023528287.1	4.2e-54	89.92	glutaredoxin-C1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc05G16100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6K609	1.8e-39	63.70	Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1	[more]
Q0JDM4	5.2e-39	62.22	Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2	[more]
Q7G8Y5	6.8e-39	73.27	Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1	[more]
Q8LF89	1.2e-35	57.86	Glutaredoxin-C8 OS=Arabidopsis thaliana OX=3702 GN=GRXC8 PE=1 SV=2	[more]
Q96305	3.9e-34	57.66	Glutaredoxin-C7 OS=Arabidopsis thaliana OX=3702 GN=GRXC7 PE=1 SV=2	[more]

BLAST of Clc05G16100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V3D7	1.2e-59	93.70	Glutaredoxin-C1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G...	[more]
A0A1S3BP86	1.2e-59	93.70	glutaredoxin-C1-like OS=Cucumis melo OX=3656 GN=LOC103491814 PE=3 SV=1	[more]
A0A0A0LB28	3.6e-59	92.91	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G56327...	[more]
A0A6J1F512	2.0e-54	89.92	glutaredoxin-C1-like OS=Cucurbita moschata OX=3662 GN=LOC111442181 PE=3 SV=1	[more]
A0A6J1J7B3	4.5e-54	89.84	glutaredoxin-C1-like OS=Cucurbita maxima OX=3661 GN=LOC111482029 PE=3 SV=1	[more]

BLAST of Clc05G16100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14070.1	8.5e-37	57.86	Thioredoxin superfamily protein	[more]
AT3G02000.1	2.7e-35	57.66	Thioredoxin superfamily protein	[more]
AT4G15700.1	2.2e-29	58.25	Thioredoxin superfamily protein	[more]
AT5G18600.1	2.9e-29	59.00	Thioredoxin superfamily protein	[more]
AT4G15670.1	6.5e-29	55.34	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 37..100 e-value: 1.4E-14 score: 54.0
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 20..126 e-value: 3.5E-31 score: 109.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR10168:SF215	GLUTAREDOXIN-C5	coord: 5..126
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 25..126 score: 22.551102
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 36..118 e-value: 1.62545E-39 score: 125.345
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 28..127 e-value: 2.3E-44 score: 147.4
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 5..126
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 26..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G16100.1	Clc05G16100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048653	anther development
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0097573	glutathione oxidoreductase activity