Clc05G16020 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G16020
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Shikimate kinase
Location	ClcChr05: 20892960 .. 20896424 (-)
RNA-Seq Expression	Clc05G16020
Synteny	Clc05G16020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAATTTAACCAAAATAATTAATGCGGAAAATGAAATAGACTTGGCGACCCCAAGGGGAAGGATAAAGTGCTTTTCTGTGAAGCGTTTCCTGTCCCGAGAGATCTTCTCATGGCGATGAACACCACTGTTTCTTCACTAACTGATTTCCAATTCAATATCCACTTGCCCAAAATTGAAGCAATGGCTCTGAATTCGAGCTTCTCCTTGTCCCTGCCGCCTTCTCTTCGTCGTAATCACAGCCTTCCACTTCATATTTGTCGACCATTTATGCAATCTTCTGCTATTCGACGCCGCAGATCTCTGCCATCGACTTGCTTAGTTTCAGACGGAACTTCATTCAGTGAGTTCAAGTTTTGTATCCATTTTTCTCCGAGTTACTTTGTAATCTTGCATTTTTCTCACGACCATGTGTTTTCTGGCTTTTGGATTTTCAATAATGAATTTTACTCCAGTTGTTTTGGTTTATGCATGAGGTTTTTTCTTCCGTATAGTGCAGTTTTAAGGTCACTTCACTTAGAATTGGAGTCACTTGGTCATGGTGCTATTTTCTTGTAAATCATGGATGCTGTATAGTTTAAAATCGAGATTGACCGGTGGTATAGAGCCTTAATTAGATTAATTTGAAGGTCAATGCTGCAGAAAACATTTGTGTAATTCGGTTAAACACGCTTGCCTTAAGTTGGAGAGTGGAGTTAAATTGAAATCTAATTCAGCTAATTAAAATCTATTTAAGAGTAAGAATCTAAAGGATGAATTGTCGAGTTTCAGTTTCATCTCTCTTTACTCAGTGATATTCATGTTGGCCTTTCTTAGATGTGGAGGCGAAGGTCACTGTCGATGATCTATCTCTTGAAGTGAAGGTTAGATGTTGTTTCTGTAGCCTCAAGTTTCTATATTTTAGTGAACTGAAAGAATGGAAGAAACCTAAGTTTTAAACCTCAGAGAATCCATTTTGTACTTATTTTTGCTCTATTTAAGCTTGTGTTGTGAATCGTGGCGGTGCATTTAGATTGGTTCAAGTTGGCTTCTTTTTTCTTGTAGCTTGAAGTGTTTATTTACACTGTTCAGTTTGAATTCAGAAGAAAGCAATGGATGTGGGTCCTGAATTGAAAGGAACTTCCATCTTTCTCGTGGGTAAGCACTGATCTTCTATTTTGGGGCAATTTACATTCTTAACAAACTAATATATGAAAAAATTTTACTTGAAGGGATCAACAGCTCCATAAAAATTAAGTTGGGGAAATTCCTGGCTGATGTTTTGAGATACTATTACTTTGACAGGTACTTGTAGAGGTACTTTTTCTGTCTTGGTGTGTGGTATTGTTCTCCTTTCTTTGCTAATTCCAAATGGCAAATGCATATAGTGATAGTTTAGTTGTGGAAGCTAGTGGTGGTGAGGCTGCTGCCAAACTTTATAAGCAACGTGATGAAAATGGTTTTCGGGCATCTGAGGTAGGTTATGCTTTGTTAATATTGCTCTGAAGTTATTTAGTTAAAACTGGCACTTTAGTAGCACCTTTTTAACTCCATTTTCTAGATTCTTTTTTCATCATCAGTTACTTGGTGAATGAGTTTTTTACTTATTCGTGATGGACCCTATGAAAACAATAAGGCTCATGTACCTGAGAACTCTTATTGAATGTCCTCGGGCAATGTTTGACAATACATGTTTTGTTAAATGTTCTATAAATAATAGTAACAGTCACAGTTACTTGGCATGCCATTTTGTTGCAGACTGAAGTGTTAAAACAACTATCTTCTATGGGTCGACTAGTTGTATGCGCTGGAAATGGTGCCGTTCAGAGCTCTACTAATCTGTATGAATGTTCAATGCTTAACTTTTACGGGTTTCGTGTACACATTCGTCATGGAAAATTCACCGCCTAGTTATCTAAGTCAATTTTCAAATTTTTAATGCTCACGTTGCTCTTGGATATCATTTTACATGCAGGGCGCTTTTGAGGCATGGCATAACATTGTGGATTGATTTACCCCTACAGATGATAGCAGAGGAATTTGCTGAAGATCGAAGCCAACGTCCAATATTTGATATATCTACTTCTGGATCTTATTCTGAGGTAATAACGGTTTCAGTTTGTTTGAACTTGAATGTGGTTTTCAACATAGTTTTGAACTTCTTTTAAACCCGATTTTGAGAATTAAAACTTTTAGTGGTTCTCTAATGTAAAGATTTATCTTGCACTTGAAATTGCTATTTACAAGTTTATGAATTTGAATAGAAGAATAATTTCATTTCTATCTACCTTTCTCGTTGAATTGACTGAATCCATAGACAATCTTCATTCCTTTGGCTATTCTTGTGTATAACGCAGGTGCTGGGTCAAATAACTTCCCTCTATCAAAAAATAAAAGACGGCTATGCCACGGCTGATGCTTCAATATCACTCCAAAGTATGTGATCCCGATCCTTCCTGCACTTGCAATATTCCAGGTTTTTCATGCTTATTCTGGCTTCTAACACTTCCTTTCCTTGCCTTACAGAACTTGCAAGTAAATTAGGATACGATGACTTCAATGCCGTCACTACCGAGGACATGGCTTTGGAGGTGTGTACCCTTTTGTTATTTATACTTTTTCACGACAAAGGAACAAATTTTACCCTCCAATTCTATATAAATATATAGGCTAAATTACAAGTTTAGTTTCCAAACTTTCAATTTTGTGTCGTCTACGTCATTGACACATCCAAAGTTTCTGATAAGTAATTGACCTATCAGATATCAAATCGCTATAGACTCTACTTTTAATTTTGTGTTTGGTAGGTCTAAATAGATCAATGACCTATTGAAAATTTAGAGACTTTATTAGACACAAAAGTTTAAAAGACTTTTTAGACATTTCAAAGATCAAATAGTAACAAACTTGAAAGTTCAAAGACAAACTTGTAATCTAACCTACAATTTCTTAATCATAAGATTATTTTGGCATTATTAGTCTTAAAATGTTAAAACTCCTGGGATGCACAAAGTTACAATGCTCCAGATGATTTATTATATTGGGATATGCAACAGGCTCTGAAGGAGATAGAAAAACTGACAAGAGTTAAGAAGATGATCGAAGCAGCAGCAAAACCTTTTTAACCCAAAGAAAAAAAAAAAAAGAAAAAATGCAGTTTGTATTCCATGGTGTCAACATAATAACAATTAAGAGCCCCAAGGGTTGGAAGACCTGATGGGTAGCCTTTTTTAGGCCTCTGGGGAAAGTCATCACTCTGGTCAGAGCAGTGTAAAATATATTGATATGGGTATTTCAATTTTACTTCCAAATTAGGTAAATAGATCTTGCTATTAGTATGCACATTCATGTCTTGGGATTAATAGATAAGTTTTTTTATTATGTGTTATGTGTAATTGCTAATGATATCGAGATATCAATTAATCTTTAATACCGATGTCAAACTCTCCTATTTACAAATATATTGACGTAGCAATGGATTTTTCAA

mRNA sequence

AATAATTTAACCAAAATAATTAATGCGGAAAATGAAATAGACTTGGCGACCCCAAGGGGAAGGATAAAGTGCTTTTCTGTGAAGCGTTTCCTGTCCCGAGAGATCTTCTCATGGCGATGAACACCACTGTTTCTTCACTAACTGATTTCCAATTCAATATCCACTTGCCCAAAATTGAAGCAATGGCTCTGAATTCGAGCTTCTCCTTGTCCCTGCCGCCTTCTCTTCGTCGTAATCACAGCCTTCCACTTCATATTTGTCGACCATTTATGCAATCTTCTGCTATTCGACGCCGCAGATCTCTGCCATCGACTTGCTTAGTTTCAGACGGAACTTCATTCAATGTGGAGGCGAAGGTCACTGTCGATGATCTATCTCTTGAAGTGAAGAAGAAAGCAATGGATGTGGGTCCTGAATTGAAAGGAACTTCCATCTTTCTCGTGGGGATCAACAGCTCCATAAAAATTAAGTTGGGGAAATTCCTGGCTGATGTTTTGAGATACTATTACTTTGACAGTGATAGTTTAGTTGTGGAAGCTAGTGGTGGTGAGGCTGCTGCCAAACTTTATAAGCAACGTGATGAAAATGGTTTTCGGGCATCTGAGACTGAAGTGTTAAAACAACTATCTTCTATGGGTCGACTAGTTGTATGCGCTGGAAATGGTGCCGTTCAGAGCTCTACTAATCTGGCGCTTTTGAGGCATGGCATAACATTGTGGATTGATTTACCCCTACAGATGATAGCAGAGGAATTTGCTGAAGATCGAAGCCAACGTCCAATATTTGATATATCTACTTCTGGATCTTATTCTGAGGTGCTGGGTCAAATAACTTCCCTCTATCAAAAAATAAAAGACGGCTATGCCACGGCTGATGCTTCAATATCACTCCAAAAACTTGCAAGTAAATTAGGATACGATGACTTCAATGCCGTCACTACCGAGGACATGGCTTTGGAGGCTCTGAAGGAGATAGAAAAACTGACAAGAGTTAAGAAGATGATCGAAGCAGCAGCAAAACCTTTTTAACCCAAAGAAAAAAAAAAAAAGAAAAAATGCAGTTTGTATTCCATGGTGTCAACATAATAACAATTAAGAGCCCCAAGGGTTGGAAGACCTGATGGGTAGCCTTTTTTAGGCCTCTGGGGAAAGTCATCACTCTGGTCAGAGCAGTGTAAAATATATTGATATGGGTATTTCAATTTTACTTCCAAATTAGGTAAATAGATCTTGCTATTAGTATGCACATTCATGTCTTGGGATTAATAGATAAGTTTTTTTATTATGTGTTATGTGTAATTGCTAATGATATCGAGATATCAATTAATCTTTAATACCGATGTCAAACTCTCCTATTTACAAATATATTGACGTAGCAATGGATTTTTCAA

Coding sequence (CDS)

ATGGCGATGAACACCACTGTTTCTTCACTAACTGATTTCCAATTCAATATCCACTTGCCCAAAATTGAAGCAATGGCTCTGAATTCGAGCTTCTCCTTGTCCCTGCCGCCTTCTCTTCGTCGTAATCACAGCCTTCCACTTCATATTTGTCGACCATTTATGCAATCTTCTGCTATTCGACGCCGCAGATCTCTGCCATCGACTTGCTTAGTTTCAGACGGAACTTCATTCAATGTGGAGGCGAAGGTCACTGTCGATGATCTATCTCTTGAAGTGAAGAAGAAAGCAATGGATGTGGGTCCTGAATTGAAAGGAACTTCCATCTTTCTCGTGGGGATCAACAGCTCCATAAAAATTAAGTTGGGGAAATTCCTGGCTGATGTTTTGAGATACTATTACTTTGACAGTGATAGTTTAGTTGTGGAAGCTAGTGGTGGTGAGGCTGCTGCCAAACTTTATAAGCAACGTGATGAAAATGGTTTTCGGGCATCTGAGACTGAAGTGTTAAAACAACTATCTTCTATGGGTCGACTAGTTGTATGCGCTGGAAATGGTGCCGTTCAGAGCTCTACTAATCTGGCGCTTTTGAGGCATGGCATAACATTGTGGATTGATTTACCCCTACAGATGATAGCAGAGGAATTTGCTGAAGATCGAAGCCAACGTCCAATATTTGATATATCTACTTCTGGATCTTATTCTGAGGTGCTGGGTCAAATAACTTCCCTCTATCAAAAAATAAAAGACGGCTATGCCACGGCTGATGCTTCAATATCACTCCAAAAACTTGCAAGTAAATTAGGATACGATGACTTCAATGCCGTCACTACCGAGGACATGGCTTTGGAGGCTCTGAAGGAGATAGAAAAACTGACAAGAGTTAAGAAGATGATCGAAGCAGCAGCAAAACCTTTTTAA

Protein sequence

MAMNTTVSSLTDFQFNIHLPKIEAMALNSSFSLSLPPSLRRNHSLPLHICRPFMQSSAIRRRRSLPSTCLVSDGTSFNVEAKVTVDDLSLEVKKKAMDVGPELKGTSIFLVGINSSIKIKLGKFLADVLRYYYFDSDSLVVEASGGEAAAKLYKQRDENGFRASETEVLKQLSSMGRLVVCAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQRPIFDISTSGSYSEVLGQITSLYQKIKDGYATADASISLQKLASKLGYDDFNAVTTEDMALEALKEIEKLTRVKKMIEAAAKPF

Homology

[Close]

BLAST of Clc05G16020 vs. NCBI nr
Match: XP_038877384.1 (probable inactive shikimate kinase like 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 546.6 bits (1407), Expect = 1.4e-151
Identity = 286/305 (93.77%), Postives = 293/305 (96.07%), Query Frame = 0


Query: 1   MAMNTTVSSLTDFQFNIHLPKIEAMALNSSFSLSLPPSLRRNHSLPLHICRPFMQSSAIR 60
           MAM TTVSSLTD QFNI+LPK EAMALNSSFSLSLPPSL RNHS PLHIC PFMQSSAIR
Sbjct: 26  MAMKTTVSSLTDLQFNIYLPKFEAMALNSSFSLSLPPSLCRNHSFPLHICPPFMQSSAIR 85

Query: 61  RRRSLPSTCLVSDGTSFNVEAKVTVDDLSLEVKKKAMDVGPELKGTSIFLVGINSSIKIK 120
           RRRSLPSTCLVSDGT+FNVEAKVTVDDL LEVKKKAMDV PELKGTSIFLVGINSSIK K
Sbjct: 86  RRRSLPSTCLVSDGTAFNVEAKVTVDDLPLEVKKKAMDVAPELKGTSIFLVGINSSIKTK 145

Query: 121 LGKFLADVLRYYYFDSDSLVVEASGGEAAAKLYKQRDENGFRASETEVLKQLSSMGRLVV 180
           LGKFLAD+LRYYYFDSDSLVVEASGGEAAAKLYKQ DENGF+ASE+EVLKQLSSMGRLVV
Sbjct: 146 LGKFLADLLRYYYFDSDSLVVEASGGEAAAKLYKQNDENGFQASESEVLKQLSSMGRLVV 205

Query: 181 CAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQRPIFDISTSGSYSEVLGQI 240
           CAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQ P+FDISTSGSYSEVL QI
Sbjct: 206 CAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQHPVFDISTSGSYSEVLAQI 265

Query: 241 TSLYQKIKDGYATADASISLQKLASKLGYDDFNAVTTEDMALEALKEIEKLTRVKKMIEA 300
           TSLYQKIKDGYATADASISLQKLASKLGYDDFNAVTTED+ALEALKEIEKLTRVKKMIEA
Sbjct: 266 TSLYQKIKDGYATADASISLQKLASKLGYDDFNAVTTEDLALEALKEIEKLTRVKKMIEA 325

Query: 301 AAKPF 306
           AAKPF
Sbjct: 326 AAKPF 330

[Close]

BLAST of Clc05G16020 vs. NCBI nr
Match: KAA0060353.1 (putative inactive shikimate kinase like 1 [Cucumis melo var. makuwa] >TYK22102.1 putative inactive shikimate kinase like 1 [Cucumis melo var. makuwa])

HSP 1 Score: 538.9 bits (1387), Expect = 2.9e-149
Identity = 284/307 (92.51%), Postives = 292/307 (95.11%), Query Frame = 0


Query: 1   MAMN--TTVSSLTDFQFNIHLPKIEAMALNSSFSLSLPPSLRRNHSLPLHICRPFMQSSA 60
           MAMN  TTVS LTD QFNIHLPK EAMALNSSFSLSLP SLRRNHSLPLHIC PF+QSSA
Sbjct: 88  MAMNLKTTVSPLTDLQFNIHLPKFEAMALNSSFSLSLPSSLRRNHSLPLHICPPFIQSSA 147

Query: 61  IRRRRSLPSTCLVSDGTSFNVEAKVTVDDLSLEVKKKAMDVGPELKGTSIFLVGINSSIK 120
           IRRRRSLPS+CLVSDGTS NVEAKVTVDDLSLEVKKKAMDVGPELKGTSIFLVGINSSIK
Sbjct: 148 IRRRRSLPSSCLVSDGTSLNVEAKVTVDDLSLEVKKKAMDVGPELKGTSIFLVGINSSIK 207

Query: 121 IKLGKFLADVLRYYYFDSDSLVVEASGGEAAAKLYKQRDENGFRASETEVLKQLSSMGRL 180
             LGK LADVLRYYYFDSDSLVVEASGGEAAAKLYKQ DE GF+ASETEVLKQLSSMGRL
Sbjct: 208 TNLGKLLADVLRYYYFDSDSLVVEASGGEAAAKLYKQSDEKGFQASETEVLKQLSSMGRL 267

Query: 181 VVCAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQRPIFDISTSGSYSEVLG 240
           VVCAG+GAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQ P+FDISTSGSYSEVLG
Sbjct: 268 VVCAGSGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQHPVFDISTSGSYSEVLG 327

Query: 241 QITSLYQKIKDGYATADASISLQKLASKLGYDDFNAVTTEDMALEALKEIEKLTRVKKMI 300
           QITS+YQK+KDGYATADA ISLQKLASKLGYDDFNAVTTEDMA+EALKEIEKLTRVKKMI
Sbjct: 328 QITSIYQKVKDGYATADALISLQKLASKLGYDDFNAVTTEDMAMEALKEIEKLTRVKKMI 387

Query: 301 EAAAKPF 306
           EAAAKPF
Sbjct: 388 EAAAKPF 394

[Close]

BLAST of Clc05G16020 vs. NCBI nr
Match: XP_008450164.1 (PREDICTED: probable inactive shikimate kinase like 1, chloroplastic [Cucumis melo])

HSP 1 Score: 538.9 bits (1387), Expect = 2.9e-149
Identity = 284/307 (92.51%), Postives = 292/307 (95.11%), Query Frame = 0


Query: 1   MAMN--TTVSSLTDFQFNIHLPKIEAMALNSSFSLSLPPSLRRNHSLPLHICRPFMQSSA 60
           MAMN  TTVS LTD QFNIHLPK EAMALNSSFSLSLP SLRRNHSLPLHIC PF+QSSA
Sbjct: 1   MAMNLKTTVSPLTDLQFNIHLPKFEAMALNSSFSLSLPSSLRRNHSLPLHICPPFIQSSA 60

Query: 61  IRRRRSLPSTCLVSDGTSFNVEAKVTVDDLSLEVKKKAMDVGPELKGTSIFLVGINSSIK 120
           IRRRRSLPS+CLVSDGTS NVEAKVTVDDLSLEVKKKAMDVGPELKGTSIFLVGINSSIK
Sbjct: 61  IRRRRSLPSSCLVSDGTSLNVEAKVTVDDLSLEVKKKAMDVGPELKGTSIFLVGINSSIK 120

Query: 121 IKLGKFLADVLRYYYFDSDSLVVEASGGEAAAKLYKQRDENGFRASETEVLKQLSSMGRL 180
             LGK LADVLRYYYFDSDSLVVEASGGEAAAKLYKQ DE GF+ASETEVLKQLSSMGRL
Sbjct: 121 TNLGKLLADVLRYYYFDSDSLVVEASGGEAAAKLYKQSDEKGFQASETEVLKQLSSMGRL 180

Query: 181 VVCAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQRPIFDISTSGSYSEVLG 240
           VVCAG+GAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQ P+FDISTSGSYSEVLG
Sbjct: 181 VVCAGSGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQHPVFDISTSGSYSEVLG 240

Query: 241 QITSLYQKIKDGYATADASISLQKLASKLGYDDFNAVTTEDMALEALKEIEKLTRVKKMI 300
           QITS+YQK+KDGYATADA ISLQKLASKLGYDDFNAVTTEDMA+EALKEIEKLTRVKKMI
Sbjct: 241 QITSIYQKVKDGYATADALISLQKLASKLGYDDFNAVTTEDMAMEALKEIEKLTRVKKMI 300

Query: 301 EAAAKPF 306
           EAAAKPF
Sbjct: 301 EAAAKPF 307

[Close]

BLAST of Clc05G16020 vs. NCBI nr
Match: XP_004149836.1 (probable inactive shikimate kinase like 1, chloroplastic [Cucumis sativus] >KGN58101.1 hypothetical protein Csa_017634 [Cucumis sativus])

HSP 1 Score: 524.6 bits (1350), Expect = 5.6e-145
Identity = 275/305 (90.16%), Postives = 284/305 (93.11%), Query Frame = 0


Query: 1   MAMNTTVSSLTDFQFNIHLPKIEAMALNSSFSLSLPPSLRRNHSLPLHICRPFMQSSAIR 60
           M   T VS LTD QFN HLPK EA+ALNSSFSLSLP SLRRN+SLPLHIC PF+QSSAIR
Sbjct: 3   MKFKTIVSPLTDLQFNTHLPKSEALALNSSFSLSLPSSLRRNNSLPLHICPPFIQSSAIR 62

Query: 61  RRRSLPSTCLVSDGTSFNVEAKVTVDDLSLEVKKKAMDVGPELKGTSIFLVGINSSIKIK 120
           RRRSLPS+CL SDGT+ NVEAKVTVDDLSLEVKKKAMDV PELKGTSIFLVGINSSIK K
Sbjct: 63  RRRSLPSSCLASDGTALNVEAKVTVDDLSLEVKKKAMDVAPELKGTSIFLVGINSSIKTK 122

Query: 121 LGKFLADVLRYYYFDSDSLVVEASGGEAAAKLYKQRDENGFRASETEVLKQLSSMGRLVV 180
           LGK LADVLRYYYFDSDSLVVE SGGEAAAKLYKQ DE GF+A ETEVLKQLSSMGRLVV
Sbjct: 123 LGKLLADVLRYYYFDSDSLVVEVSGGEAAAKLYKQSDEKGFQAFETEVLKQLSSMGRLVV 182

Query: 181 CAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQRPIFDISTSGSYSEVLGQI 240
           CAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQ P+FDISTSGSYSEVLGQI
Sbjct: 183 CAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQHPVFDISTSGSYSEVLGQI 242

Query: 241 TSLYQKIKDGYATADASISLQKLASKLGYDDFNAVTTEDMALEALKEIEKLTRVKKMIEA 300
           TSLYQK+KDGYATADA ISLQKLASKLGYDDFNAVTTEDMA+EALKEIEKLTRVKKMIEA
Sbjct: 243 TSLYQKVKDGYATADALISLQKLASKLGYDDFNAVTTEDMAMEALKEIEKLTRVKKMIEA 302

Query: 301 AAKPF 306
           AAKPF
Sbjct: 303 AAKPF 307

[Close]

BLAST of Clc05G16020 vs. NCBI nr
Match: XP_022989695.1 (probable inactive shikimate kinase like 1, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 498.0 bits (1281), Expect = 5.6e-137
Identity = 260/305 (85.25%), Postives = 279/305 (91.48%), Query Frame = 0


Query: 1   MAMNTTVSSLTDFQFNIHLPKIEAMALNSSFSLSLPPSLRRNHSLPLHICRPFMQSSAIR 60
           MAM TTVS LTDFQFNIHLPKI+ M+LNSS++L LP S+R N +LPLH  R F+ SS I+
Sbjct: 1   MAMKTTVSPLTDFQFNIHLPKIQPMSLNSSYALPLPFSVRCNQNLPLHFRRRFLHSSVIQ 60

Query: 61  RRRSLPSTCLVSDGTSFNVEAKVTVDDLSLEVKKKAMDVGPELKGTSIFLVGINSSIKIK 120
           RRRSLPSTC VSDGT++NVEAK T DDLSLEVKKKAMDV PELKGTSIFLVGINSS+K K
Sbjct: 61  RRRSLPSTCFVSDGTAYNVEAKATTDDLSLEVKKKAMDVAPELKGTSIFLVGINSSLKTK 120

Query: 121 LGKFLADVLRYYYFDSDSLVVEASGGEAAAKLYKQRDENGFRASETEVLKQLSSMGRLVV 180
           LGK LAD+LRYYYFDSD LVVEASGG AAAKLYK+ DENGFRASETEVLKQLSSMGRLVV
Sbjct: 121 LGKLLADMLRYYYFDSDGLVVEASGGVAAAKLYKESDENGFRASETEVLKQLSSMGRLVV 180

Query: 181 CAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQRPIFDISTSGSYSEVLGQI 240
           CAGNGAV+SSTNLALLRHGITLWID+PLQ+IAEEFAEDR Q P+FDISTSGSYSEVLGQI
Sbjct: 181 CAGNGAVRSSTNLALLRHGITLWIDIPLQIIAEEFAEDRGQLPVFDISTSGSYSEVLGQI 240

Query: 241 TSLYQKIKDGYATADASISLQKLASKLGYDDFNAVTTEDMALEALKEIEKLTRVKKMIEA 300
           TSLYQ+IK GYATADASISLQKLAS LGYDDFNAVTTEDMALEALKEIEKL RVKKM+EA
Sbjct: 241 TSLYQEIKVGYATADASISLQKLASTLGYDDFNAVTTEDMALEALKEIEKLIRVKKMMEA 300

Query: 301 AAKPF 306
           AAKPF
Sbjct: 301 AAKPF 305

[Close]

BLAST of Clc05G16020 vs. ExPASy Swiss-Prot
Match: Q9LW20 (Probable inactive shikimate kinase like 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SKL1 PE=2 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.8e-66
Identity = 142/261 (54.41%), Postives = 182/261 (69.73%), Query Frame = 0


Query: 49  ICRPFMQSSAIR----RRRSLPSTCLVSDGTSFNVEAKVTVDDLSLEVKKKAMDVGPELK 108
           +C+P + SS+ R      R  PS  L     S  +   V  D + + VK+KAMD+ PELK
Sbjct: 31  LCKPLLSSSSTRLISCHSRIAPSRSLADQSASTGISV-VDSDPIDV-VKRKAMDIAPELK 90

Query: 109 GTSIFLVGINSSIKIKLGKFLADVLRYYYFDSDSLVVEASGGEAAAKLYKQRDENGFRAS 168
           G SIFLVGIN+SIK   GK LA+ LRYYYFDSD+L+ EA+GG  +A+  K+ DE  F+ S
Sbjct: 91  GASIFLVGINNSIKTNTGKLLAEALRYYYFDSDNLITEAAGGNVSAQALKEADEKAFQES 150

Query: 169 ETEVLKQLSSMGRLVVCAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQRPI 228
           ETEVLKQLSSMGRLVVCAG+GAVQS  NLALLRHGI++WID+PL + A+   +D      
Sbjct: 151 ETEVLKQLSSMGRLVVCAGDGAVQSLRNLALLRHGISIWIDVPLDITAK--GDD------ 210

Query: 229 FDISTSGSYSEVLGQITSLYQKIKDGYATADASISLQKLASKLGYDDFNAVTTEDMALEA 288
            D   S    E+   + + Y+K + GY TAD SISL+K+A+KL ++D  AVT+ED+ALE 
Sbjct: 211 -DSFHSEPSPELFDTLKASYEKSRKGYETADVSISLEKIATKLEFEDLEAVTSEDIALEI 270

Query: 289 LKEIEKLTRVKKMIEAAAKPF 306
           LKEIEKLTRVKKM+E A++PF
Sbjct: 271 LKEIEKLTRVKKMMEEASRPF 280

[Close]

BLAST of Clc05G16020 vs. ExPASy Swiss-Prot
Match: Q5NTH3 (Shikimate kinase 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SK2 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.9e-35
Identity = 82/204 (40.20%), Postives = 130/204 (63.73%), Query Frame = 0


Query: 87  DLSLEVKKKAMDVGPELKGTSIFLVGINSSIKIKLGKFLADVLRYYYFDSDSLVVEASGG 146
           D +L +K+K+ +V   L G  I+LVG+  S K  + K LA+VL Y +FDSD LV +A G 
Sbjct: 76  DEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVAKILAEVLGYSFFDSDKLVEQAVGM 135

Query: 147 EAAAKLYKQRDENGFRASETEVLKQLSSMGRLVVCAGNGAVQSSTNLALLRHGITLWIDL 206
            + A+++K+  E  FR +E+ VL+ LSSM RLVV  G GAV    N   ++ G+++W+D+
Sbjct: 136 PSVAQIFKEHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPVNWKYMKKGLSVWLDV 195

Query: 207 PLQMIAEEFAE-DRSQRPIFDISTSGSYSEVLGQITSLYQKIKDGYATADASISLQKLAS 266
           PL  +A   A+   + RP+ D  +S  Y+    +++ L ++  D YA ADA +SL+++A+
Sbjct: 196 PLDALARRIAQVGTASRPLLDQPSSDPYTAAFSKLSMLAEQRGDAYANADARVSLEEIAA 255

Query: 267 KLGYDDFNAVTTEDMALEALKEIE 290
           K G+DD + +T  D+A+EAL +IE
Sbjct: 256 KQGHDDVSKLTPTDIAIEALLKIE 279

[Close]

BLAST of Clc05G16020 vs. ExPASy Swiss-Prot
Match: Q7X7H9 (Shikimate kinase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SK3 PE=1 SV=2)

HSP 1 Score: 149.8 bits (377), Expect = 4.9e-35
Identity = 84/213 (39.44%), Postives = 129/213 (60.56%), Query Frame = 0


Query: 87  DLSLEVKKKAMDVGPELKGTSIFLVGINSSIKIKLGKFLADVLRYYYFDSDSLVVEASGG 146
           D +L +K+KA DV P L    I+LVG+  S K  +GK LA+VL Y +FDSD LV +A G 
Sbjct: 73  DEALVLKQKAEDVVPYLNDRCIYLVGMMGSGKTTVGKILAEVLGYSFFDSDKLVEKAVGI 132

Query: 147 EAAAKLYKQRDENGFRASETEVLKQLSSMGRLVVCAGNGAVQSSTNLALLRHGITLWIDL 206
            + A++++   E  FR +E+EVL+ LSSM RLVV  G GAV    N + ++ G T+W+D+
Sbjct: 133 SSVAEIFQLHSEAFFRDNESEVLRDLSSMHRLVVATGGGAVIRPINWSYMKKGSTIWLDV 192

Query: 207 PLQMIAEEFAE-DRSQRPIFDISTSGSYSEVLGQITSLYQKIKDGYATADASISLQKLAS 266
           PL  +A   A    + RP+    +   Y++   ++T+L+++  D YA ADA +SL+ +A 
Sbjct: 193 PLDALARRIAAVGTASRPLLHQESGDPYAKAYAKLTALFEQRMDSYANADARVSLEHIAV 252

Query: 267 KLGYDDFNAVTTEDMALEALKEIEKLTRVKKMI 299
           K G+ +   +T   +A+EAL ++E     K MI
Sbjct: 253 KQGHSNVTTLTPSAIAIEALLKMESFLTEKAMI 285

[Close]

BLAST of Clc05G16020 vs. ExPASy Swiss-Prot
Match: Q5NTH4 (Shikimate kinase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SK1 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 6.4e-35
Identity = 87/244 (35.66%), Postives = 142/244 (58.20%), Query Frame = 0


Query: 47  LHICRPFMQSSAIRRRRSLPSTCLVSDGTSFNVEAKVTVDDLSLEVKKKAMDVGPELKGT 106
           L +  P +  +A+  R S P   L +  +S   E      D +L +K+K+ +V   L G 
Sbjct: 38  LRVAEPAVAKAAVWARGSKPVAPLRAKKSSGGHETLHNSVDEALLLKRKSEEVLFYLNGR 97

Query: 107 SIFLVGINSSIKIKLGKFLADVLRYYYFDSDSLVVEASGGEAAAKLYKQRDENGFRASET 166
            I+LVG+  S K  +GK +++VL Y +FDSD LV +A G  + A+++K   E  FR +E+
Sbjct: 98  CIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNES 157

Query: 167 EVLKQLSSMGRLVVCAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAE-DRSQRPIF 226
            VL+ LSSM RLVV  G GAV    N   ++ G+++W+D+PL  +A   A+   + RP+ 
Sbjct: 158 SVLRDLSSMKRLVVATGGGAVIRPVNWKYMKKGLSVWLDVPLDALARRIAKVGTASRPLL 217

Query: 227 DISTSGSYSEVLGQITSLYQKIKDGYATADASISLQKLASKLGYDDFNAVTTEDMALEAL 286
           D  +   Y+    +++ L ++  D YA AD  +SL+++ASK G+DD + +T  D+A+E+ 
Sbjct: 218 DQPSGDPYTMAFSKLSMLAEQRGDAYANADVRVSLEEIASKQGHDDVSKLTPTDIAIESF 277

Query: 287 KEIE 290
            +IE
Sbjct: 278 HKIE 281

[Close]

BLAST of Clc05G16020 vs. ExPASy Swiss-Prot
Match: Q9SJ05 (Shikimate kinase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SK1 PE=1 SV=2)

HSP 1 Score: 135.2 bits (339), Expect = 1.3e-30
Identity = 69/209 (33.01%), Postives = 125/209 (59.81%), Query Frame = 0


Query: 92  VKKKAMDVGPELKGTSIFLVGINSSIKIKLGKFLADVLRYYYFDSDSLVVEASGGEAAAK 151
           +K+KA +V P L G S++LVG+  S K  +GK ++ VL Y +FD D+L+ +A  G + A+
Sbjct: 89  LKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAE 148

Query: 152 LYKQRDENGFRASETEVLKQLSSMGRLVVCAGNGAVQSSTNLALLRHGITLWIDLPLQMI 211
           ++    EN FR  ET+ LK+LSS  ++VV  G GAV    N   +  GI++W+D+PL+ +
Sbjct: 149 IFVHHGENFFRGKETDALKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEAL 208

Query: 212 AEEFAE-DRSQRPIFDISTSGSYSEVLGQITSLYQKIKDGYATADASISLQKLASKLGYD 271
           A   A      RP+    +  +YS    ++++++ +  + Y  A+A +SL+ +A+K GY 
Sbjct: 209 AHRIAAVGTDSRPLLHDESGDAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYK 268

Query: 272 DFNAVTTEDMALEALKEIEKLTRVKKMIE 300
           + + +T  ++A+EA +++      ++ +E
Sbjct: 269 NVSDLTPTEIAIEAFEQVLSFLEKEETME 297

[Close]

BLAST of Clc05G16020 vs. ExPASy TrEMBL
Match: A0A5D3DET0 (Putative inactive shikimate kinase like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00920 PE=3 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.4e-149
Identity = 284/307 (92.51%), Postives = 292/307 (95.11%), Query Frame = 0


Query: 1   MAMN--TTVSSLTDFQFNIHLPKIEAMALNSSFSLSLPPSLRRNHSLPLHICRPFMQSSA 60
           MAMN  TTVS LTD QFNIHLPK EAMALNSSFSLSLP SLRRNHSLPLHIC PF+QSSA
Sbjct: 88  MAMNLKTTVSPLTDLQFNIHLPKFEAMALNSSFSLSLPSSLRRNHSLPLHICPPFIQSSA 147

Query: 61  IRRRRSLPSTCLVSDGTSFNVEAKVTVDDLSLEVKKKAMDVGPELKGTSIFLVGINSSIK 120
           IRRRRSLPS+CLVSDGTS NVEAKVTVDDLSLEVKKKAMDVGPELKGTSIFLVGINSSIK
Sbjct: 148 IRRRRSLPSSCLVSDGTSLNVEAKVTVDDLSLEVKKKAMDVGPELKGTSIFLVGINSSIK 207

Query: 121 IKLGKFLADVLRYYYFDSDSLVVEASGGEAAAKLYKQRDENGFRASETEVLKQLSSMGRL 180
             LGK LADVLRYYYFDSDSLVVEASGGEAAAKLYKQ DE GF+ASETEVLKQLSSMGRL
Sbjct: 208 TNLGKLLADVLRYYYFDSDSLVVEASGGEAAAKLYKQSDEKGFQASETEVLKQLSSMGRL 267

Query: 181 VVCAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQRPIFDISTSGSYSEVLG 240
           VVCAG+GAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQ P+FDISTSGSYSEVLG
Sbjct: 268 VVCAGSGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQHPVFDISTSGSYSEVLG 327

Query: 241 QITSLYQKIKDGYATADASISLQKLASKLGYDDFNAVTTEDMALEALKEIEKLTRVKKMI 300
           QITS+YQK+KDGYATADA ISLQKLASKLGYDDFNAVTTEDMA+EALKEIEKLTRVKKMI
Sbjct: 328 QITSIYQKVKDGYATADALISLQKLASKLGYDDFNAVTTEDMAMEALKEIEKLTRVKKMI 387

Query: 301 EAAAKPF 306
           EAAAKPF
Sbjct: 388 EAAAKPF 394

[Close]

BLAST of Clc05G16020 vs. ExPASy TrEMBL
Match: A0A1S3BNN4 (probable inactive shikimate kinase like 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491834 PE=3 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.4e-149
Identity = 284/307 (92.51%), Postives = 292/307 (95.11%), Query Frame = 0


Query: 1   MAMN--TTVSSLTDFQFNIHLPKIEAMALNSSFSLSLPPSLRRNHSLPLHICRPFMQSSA 60
           MAMN  TTVS LTD QFNIHLPK EAMALNSSFSLSLP SLRRNHSLPLHIC PF+QSSA
Sbjct: 1   MAMNLKTTVSPLTDLQFNIHLPKFEAMALNSSFSLSLPSSLRRNHSLPLHICPPFIQSSA 60

Query: 61  IRRRRSLPSTCLVSDGTSFNVEAKVTVDDLSLEVKKKAMDVGPELKGTSIFLVGINSSIK 120
           IRRRRSLPS+CLVSDGTS NVEAKVTVDDLSLEVKKKAMDVGPELKGTSIFLVGINSSIK
Sbjct: 61  IRRRRSLPSSCLVSDGTSLNVEAKVTVDDLSLEVKKKAMDVGPELKGTSIFLVGINSSIK 120

Query: 121 IKLGKFLADVLRYYYFDSDSLVVEASGGEAAAKLYKQRDENGFRASETEVLKQLSSMGRL 180
             LGK LADVLRYYYFDSDSLVVEASGGEAAAKLYKQ DE GF+ASETEVLKQLSSMGRL
Sbjct: 121 TNLGKLLADVLRYYYFDSDSLVVEASGGEAAAKLYKQSDEKGFQASETEVLKQLSSMGRL 180

Query: 181 VVCAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQRPIFDISTSGSYSEVLG 240
           VVCAG+GAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQ P+FDISTSGSYSEVLG
Sbjct: 181 VVCAGSGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQHPVFDISTSGSYSEVLG 240

Query: 241 QITSLYQKIKDGYATADASISLQKLASKLGYDDFNAVTTEDMALEALKEIEKLTRVKKMI 300
           QITS+YQK+KDGYATADA ISLQKLASKLGYDDFNAVTTEDMA+EALKEIEKLTRVKKMI
Sbjct: 241 QITSIYQKVKDGYATADALISLQKLASKLGYDDFNAVTTEDMAMEALKEIEKLTRVKKMI 300

Query: 301 EAAAKPF 306
           EAAAKPF
Sbjct: 301 EAAAKPF 307

[Close]

BLAST of Clc05G16020 vs. ExPASy TrEMBL
Match: A0A0A0LDF4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G509960 PE=3 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 2.7e-145
Identity = 275/305 (90.16%), Postives = 284/305 (93.11%), Query Frame = 0


Query: 1   MAMNTTVSSLTDFQFNIHLPKIEAMALNSSFSLSLPPSLRRNHSLPLHICRPFMQSSAIR 60
           M   T VS LTD QFN HLPK EA+ALNSSFSLSLP SLRRN+SLPLHIC PF+QSSAIR
Sbjct: 3   MKFKTIVSPLTDLQFNTHLPKSEALALNSSFSLSLPSSLRRNNSLPLHICPPFIQSSAIR 62

Query: 61  RRRSLPSTCLVSDGTSFNVEAKVTVDDLSLEVKKKAMDVGPELKGTSIFLVGINSSIKIK 120
           RRRSLPS+CL SDGT+ NVEAKVTVDDLSLEVKKKAMDV PELKGTSIFLVGINSSIK K
Sbjct: 63  RRRSLPSSCLASDGTALNVEAKVTVDDLSLEVKKKAMDVAPELKGTSIFLVGINSSIKTK 122

Query: 121 LGKFLADVLRYYYFDSDSLVVEASGGEAAAKLYKQRDENGFRASETEVLKQLSSMGRLVV 180
           LGK LADVLRYYYFDSDSLVVE SGGEAAAKLYKQ DE GF+A ETEVLKQLSSMGRLVV
Sbjct: 123 LGKLLADVLRYYYFDSDSLVVEVSGGEAAAKLYKQSDEKGFQAFETEVLKQLSSMGRLVV 182

Query: 181 CAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQRPIFDISTSGSYSEVLGQI 240
           CAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQ P+FDISTSGSYSEVLGQI
Sbjct: 183 CAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQHPVFDISTSGSYSEVLGQI 242

Query: 241 TSLYQKIKDGYATADASISLQKLASKLGYDDFNAVTTEDMALEALKEIEKLTRVKKMIEA 300
           TSLYQK+KDGYATADA ISLQKLASKLGYDDFNAVTTEDMA+EALKEIEKLTRVKKMIEA
Sbjct: 243 TSLYQKVKDGYATADALISLQKLASKLGYDDFNAVTTEDMAMEALKEIEKLTRVKKMIEA 302

Query: 301 AAKPF 306
           AAKPF
Sbjct: 303 AAKPF 307

[Close]

BLAST of Clc05G16020 vs. ExPASy TrEMBL
Match: A0A6J1JN35 (probable inactive shikimate kinase like 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486699 PE=3 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 2.7e-137
Identity = 260/305 (85.25%), Postives = 279/305 (91.48%), Query Frame = 0


Query: 1   MAMNTTVSSLTDFQFNIHLPKIEAMALNSSFSLSLPPSLRRNHSLPLHICRPFMQSSAIR 60
           MAM TTVS LTDFQFNIHLPKI+ M+LNSS++L LP S+R N +LPLH  R F+ SS I+
Sbjct: 1   MAMKTTVSPLTDFQFNIHLPKIQPMSLNSSYALPLPFSVRCNQNLPLHFRRRFLHSSVIQ 60

Query: 61  RRRSLPSTCLVSDGTSFNVEAKVTVDDLSLEVKKKAMDVGPELKGTSIFLVGINSSIKIK 120
           RRRSLPSTC VSDGT++NVEAK T DDLSLEVKKKAMDV PELKGTSIFLVGINSS+K K
Sbjct: 61  RRRSLPSTCFVSDGTAYNVEAKATTDDLSLEVKKKAMDVAPELKGTSIFLVGINSSLKTK 120

Query: 121 LGKFLADVLRYYYFDSDSLVVEASGGEAAAKLYKQRDENGFRASETEVLKQLSSMGRLVV 180
           LGK LAD+LRYYYFDSD LVVEASGG AAAKLYK+ DENGFRASETEVLKQLSSMGRLVV
Sbjct: 121 LGKLLADMLRYYYFDSDGLVVEASGGVAAAKLYKESDENGFRASETEVLKQLSSMGRLVV 180

Query: 181 CAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQRPIFDISTSGSYSEVLGQI 240
           CAGNGAV+SSTNLALLRHGITLWID+PLQ+IAEEFAEDR Q P+FDISTSGSYSEVLGQI
Sbjct: 181 CAGNGAVRSSTNLALLRHGITLWIDIPLQIIAEEFAEDRGQLPVFDISTSGSYSEVLGQI 240

Query: 241 TSLYQKIKDGYATADASISLQKLASKLGYDDFNAVTTEDMALEALKEIEKLTRVKKMIEA 300
           TSLYQ+IK GYATADASISLQKLAS LGYDDFNAVTTEDMALEALKEIEKL RVKKM+EA
Sbjct: 241 TSLYQEIKVGYATADASISLQKLASTLGYDDFNAVTTEDMALEALKEIEKLIRVKKMMEA 300

Query: 301 AAKPF 306
           AAKPF
Sbjct: 301 AAKPF 305

[Close]

BLAST of Clc05G16020 vs. ExPASy TrEMBL
Match: A0A6J1JQ24 (probable inactive shikimate kinase like 1, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486699 PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.5e-135
Identity = 260/309 (84.14%), Postives = 279/309 (90.29%), Query Frame = 0


Query: 1   MAMNTTVSSLTDFQFNIHLPKIEAMALNSSFSLSLPPSLRRNHSLPLHICRPFMQSSAIR 60
           MAM TTVS LTDFQFNIHLPKI+ M+LNSS++L LP S+R N +LPLH  R F+ SS I+
Sbjct: 1   MAMKTTVSPLTDFQFNIHLPKIQPMSLNSSYALPLPFSVRCNQNLPLHFRRRFLHSSVIQ 60

Query: 61  RRRSLPSTCLVSDGTSFNVEAKVTVDDLSLEVKKKAMDVGPELKGTSIFLVGINSSIKIK 120
           RRRSLPSTC VSDGT++NVEAK T DDLSLEVKKKAMDV PELKGTSIFLVGINSS+K K
Sbjct: 61  RRRSLPSTCFVSDGTAYNVEAKATTDDLSLEVKKKAMDVAPELKGTSIFLVGINSSLKTK 120

Query: 121 LGKFLADVLRYYYFD----SDSLVVEASGGEAAAKLYKQRDENGFRASETEVLKQLSSMG 180
           LGK LAD+LRYYYFD    SD LVVEASGG AAAKLYK+ DENGFRASETEVLKQLSSMG
Sbjct: 121 LGKLLADMLRYYYFDRYFLSDGLVVEASGGVAAAKLYKESDENGFRASETEVLKQLSSMG 180

Query: 181 RLVVCAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQRPIFDISTSGSYSEV 240
           RLVVCAGNGAV+SSTNLALLRHGITLWID+PLQ+IAEEFAEDR Q P+FDISTSGSYSEV
Sbjct: 181 RLVVCAGNGAVRSSTNLALLRHGITLWIDIPLQIIAEEFAEDRGQLPVFDISTSGSYSEV 240

Query: 241 LGQITSLYQKIKDGYATADASISLQKLASKLGYDDFNAVTTEDMALEALKEIEKLTRVKK 300
           LGQITSLYQ+IK GYATADASISLQKLAS LGYDDFNAVTTEDMALEALKEIEKL RVKK
Sbjct: 241 LGQITSLYQEIKVGYATADASISLQKLASTLGYDDFNAVTTEDMALEALKEIEKLIRVKK 300

Query: 301 MIEAAAKPF 306
           M+EAAAKPF
Sbjct: 301 MMEAAAKPF 309

[Close]

BLAST of Clc05G16020 vs. TAIR 10
Match: AT3G26900.1 (shikimate kinase like 1 )

HSP 1 Score: 254.2 bits (648), Expect = 1.3e-67
Identity = 142/261 (54.41%), Postives = 182/261 (69.73%), Query Frame = 0


Query: 49  ICRPFMQSSAIR----RRRSLPSTCLVSDGTSFNVEAKVTVDDLSLEVKKKAMDVGPELK 108
           +C+P + SS+ R      R  PS  L     S  +   V  D + + VK+KAMD+ PELK
Sbjct: 31  LCKPLLSSSSTRLISCHSRIAPSRSLADQSASTGISV-VDSDPIDV-VKRKAMDIAPELK 90

Query: 109 GTSIFLVGINSSIKIKLGKFLADVLRYYYFDSDSLVVEASGGEAAAKLYKQRDENGFRAS 168
           G SIFLVGIN+SIK   GK LA+ LRYYYFDSD+L+ EA+GG  +A+  K+ DE  F+ S
Sbjct: 91  GASIFLVGINNSIKTNTGKLLAEALRYYYFDSDNLITEAAGGNVSAQALKEADEKAFQES 150

Query: 169 ETEVLKQLSSMGRLVVCAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQRPI 228
           ETEVLKQLSSMGRLVVCAG+GAVQS  NLALLRHGI++WID+PL + A+   +D      
Sbjct: 151 ETEVLKQLSSMGRLVVCAGDGAVQSLRNLALLRHGISIWIDVPLDITAK--GDD------ 210

Query: 229 FDISTSGSYSEVLGQITSLYQKIKDGYATADASISLQKLASKLGYDDFNAVTTEDMALEA 288
            D   S    E+   + + Y+K + GY TAD SISL+K+A+KL ++D  AVT+ED+ALE 
Sbjct: 211 -DSFHSEPSPELFDTLKASYEKSRKGYETADVSISLEKIATKLEFEDLEAVTSEDIALEI 270

Query: 289 LKEIEKLTRVKKMIEAAAKPF 306
           LKEIEKLTRVKKM+E A++PF
Sbjct: 271 LKEIEKLTRVKKMMEEASRPF 280

[Close]

BLAST of Clc05G16020 vs. TAIR 10
Match: AT3G26900.2 (shikimate kinase like 1 )

HSP 1 Score: 254.2 bits (648), Expect = 1.3e-67
Identity = 142/261 (54.41%), Postives = 182/261 (69.73%), Query Frame = 0


Query: 49  ICRPFMQSSAIR----RRRSLPSTCLVSDGTSFNVEAKVTVDDLSLEVKKKAMDVGPELK 108
           +C+P + SS+ R      R  PS  L     S  +   V  D + + VK+KAMD+ PELK
Sbjct: 31  LCKPLLSSSSTRLISCHSRIAPSRSLADQSASTGISV-VDSDPIDV-VKRKAMDIAPELK 90

Query: 109 GTSIFLVGINSSIKIKLGKFLADVLRYYYFDSDSLVVEASGGEAAAKLYKQRDENGFRAS 168
           G SIFLVGIN+SIK   GK LA+ LRYYYFDSD+L+ EA+GG  +A+  K+ DE  F+ S
Sbjct: 91  GASIFLVGINNSIKTNTGKLLAEALRYYYFDSDNLITEAAGGNVSAQALKEADEKAFQES 150

Query: 169 ETEVLKQLSSMGRLVVCAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQRPI 228
           ETEVLKQLSSMGRLVVCAG+GAVQS  NLALLRHGI++WID+PL + A+   +D      
Sbjct: 151 ETEVLKQLSSMGRLVVCAGDGAVQSLRNLALLRHGISIWIDVPLDITAK--GDD------ 210

Query: 229 FDISTSGSYSEVLGQITSLYQKIKDGYATADASISLQKLASKLGYDDFNAVTTEDMALEA 288
            D   S    E+   + + Y+K + GY TAD SISL+K+A+KL ++D  AVT+ED+ALE 
Sbjct: 211 -DSFHSEPSPELFDTLKASYEKSRKGYETADVSISLEKIATKLEFEDLEAVTSEDIALEI 270

Query: 289 LKEIEKLTRVKKMIEAAAKPF 306
           LKEIEKLTRVKKM+E A++PF
Sbjct: 271 LKEIEKLTRVKKMMEEASRPF 280

[Close]

BLAST of Clc05G16020 vs. TAIR 10
Match: AT3G26900.3 (shikimate kinase like 1 )

HSP 1 Score: 254.2 bits (648), Expect = 1.3e-67
Identity = 142/261 (54.41%), Postives = 182/261 (69.73%), Query Frame = 0


Query: 49  ICRPFMQSSAIR----RRRSLPSTCLVSDGTSFNVEAKVTVDDLSLEVKKKAMDVGPELK 108
           +C+P + SS+ R      R  PS  L     S  +   V  D + + VK+KAMD+ PELK
Sbjct: 31  LCKPLLSSSSTRLISCHSRIAPSRSLADQSASTGISV-VDSDPIDV-VKRKAMDIAPELK 90

Query: 109 GTSIFLVGINSSIKIKLGKFLADVLRYYYFDSDSLVVEASGGEAAAKLYKQRDENGFRAS 168
           G SIFLVGIN+SIK   GK LA+ LRYYYFDSD+L+ EA+GG  +A+  K+ DE  F+ S
Sbjct: 91  GASIFLVGINNSIKTNTGKLLAEALRYYYFDSDNLITEAAGGNVSAQALKEADEKAFQES 150

Query: 169 ETEVLKQLSSMGRLVVCAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQRPI 228
           ETEVLKQLSSMGRLVVCAG+GAVQS  NLALLRHGI++WID+PL + A+   +D      
Sbjct: 151 ETEVLKQLSSMGRLVVCAGDGAVQSLRNLALLRHGISIWIDVPLDITAK--GDD------ 210

Query: 229 FDISTSGSYSEVLGQITSLYQKIKDGYATADASISLQKLASKLGYDDFNAVTTEDMALEA 288
            D   S    E+   + + Y+K + GY TAD SISL+K+A+KL ++D  AVT+ED+ALE 
Sbjct: 211 -DSFHSEPSPELFDTLKASYEKSRKGYETADVSISLEKIATKLEFEDLEAVTSEDIALEI 270

Query: 289 LKEIEKLTRVKKMIEAAAKPF 306
           LKEIEKLTRVKKM+E A++PF
Sbjct: 271 LKEIEKLTRVKKMMEEASRPF 280

[Close]

BLAST of Clc05G16020 vs. TAIR 10
Match: AT2G21940.1 (shikimate kinase 1 )

HSP 1 Score: 135.2 bits (339), Expect = 8.9e-32
Identity = 69/209 (33.01%), Postives = 125/209 (59.81%), Query Frame = 0


Query: 92  VKKKAMDVGPELKGTSIFLVGINSSIKIKLGKFLADVLRYYYFDSDSLVVEASGGEAAAK 151
           +K+KA +V P L G S++LVG+  S K  +GK ++ VL Y +FD D+L+ +A  G + A+
Sbjct: 89  LKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAE 148

Query: 152 LYKQRDENGFRASETEVLKQLSSMGRLVVCAGNGAVQSSTNLALLRHGITLWIDLPLQMI 211
           ++    EN FR  ET+ LK+LSS  ++VV  G GAV    N   +  GI++W+D+PL+ +
Sbjct: 149 IFVHHGENFFRGKETDALKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEAL 208

Query: 212 AEEFAE-DRSQRPIFDISTSGSYSEVLGQITSLYQKIKDGYATADASISLQKLASKLGYD 271
           A   A      RP+    +  +YS    ++++++ +  + Y  A+A +SL+ +A+K GY 
Sbjct: 209 AHRIAAVGTDSRPLLHDESGDAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYK 268

Query: 272 DFNAVTTEDMALEALKEIEKLTRVKKMIE 300
           + + +T  ++A+EA +++      ++ +E
Sbjct: 269 NVSDLTPTEIAIEAFEQVLSFLEKEETME 297

[Close]

BLAST of Clc05G16020 vs. TAIR 10
Match: AT2G21940.2 (shikimate kinase 1 )

HSP 1 Score: 135.2 bits (339), Expect = 8.9e-32
Identity = 69/209 (33.01%), Postives = 125/209 (59.81%), Query Frame = 0


Query: 92  VKKKAMDVGPELKGTSIFLVGINSSIKIKLGKFLADVLRYYYFDSDSLVVEASGGEAAAK 151
           +K+KA +V P L G S++LVG+  S K  +GK ++ VL Y +FD D+L+ +A  G + A+
Sbjct: 89  LKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAE 148

Query: 152 LYKQRDENGFRASETEVLKQLSSMGRLVVCAGNGAVQSSTNLALLRHGITLWIDLPLQMI 211
           ++    EN FR  ET+ LK+LSS  ++VV  G GAV    N   +  GI++W+D+PL+ +
Sbjct: 149 IFVHHGENFFRGKETDALKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEAL 208

Query: 212 AEEFAE-DRSQRPIFDISTSGSYSEVLGQITSLYQKIKDGYATADASISLQKLASKLGYD 271
           A   A      RP+    +  +YS    ++++++ +  + Y  A+A +SL+ +A+K GY 
Sbjct: 209 AHRIAAVGTDSRPLLHDESGDAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYK 268

Query: 272 DFNAVTTEDMALEALKEIEKLTRVKKMIE 300
           + + +T  ++A+EA +++      ++ +E
Sbjct: 269 NVSDLTPTEIAIEAFEQVLSFLEKEETME 297

The following BLAST results are available for this feature:

BLAST of Clc05G16020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877384.1	1.4e-151	93.77	probable inactive shikimate kinase like 1, chloroplastic [Benincasa hispida]	[more]
KAA0060353.1	2.9e-149	92.51	putative inactive shikimate kinase like 1 [Cucumis melo var. makuwa] >TYK22102.1...	[more]
XP_008450164.1	2.9e-149	92.51	PREDICTED: probable inactive shikimate kinase like 1, chloroplastic [Cucumis mel...	[more]
XP_004149836.1	5.6e-145	90.16	probable inactive shikimate kinase like 1, chloroplastic [Cucumis sativus] >KGN5...	[more]
XP_022989695.1	5.6e-137	85.25	probable inactive shikimate kinase like 1, chloroplastic isoform X2 [Cucurbita m...	[more]

BLAST of Clc05G16020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LW20	1.8e-66	54.41	Probable inactive shikimate kinase like 1, chloroplastic OS=Arabidopsis thaliana...	[more]
Q5NTH3	2.9e-35	40.20	Shikimate kinase 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SK...	[more]
Q7X7H9	4.9e-35	39.44	Shikimate kinase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SK...	[more]
Q5NTH4	6.4e-35	35.66	Shikimate kinase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SK...	[more]
Q9SJ05	1.3e-30	33.01	Shikimate kinase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SK1 PE=1 SV...	[more]

BLAST of Clc05G16020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DET0	1.4e-149	92.51	Putative inactive shikimate kinase like 1 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3BNN4	1.4e-149	92.51	probable inactive shikimate kinase like 1, chloroplastic OS=Cucumis melo OX=3656...	[more]
A0A0A0LDF4	2.7e-145	90.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G509960 PE=3 SV=1	[more]
A0A6J1JN35	2.7e-137	85.25	probable inactive shikimate kinase like 1, chloroplastic isoform X2 OS=Cucurbita...	[more]
A0A6J1JQ24	1.5e-135	84.14	probable inactive shikimate kinase like 1, chloroplastic isoform X1 OS=Cucurbita...	[more]

BLAST of Clc05G16020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26900.1	1.3e-67	54.41	shikimate kinase like 1	[more]
AT3G26900.2	1.3e-67	54.41	shikimate kinase like 1	[more]
AT3G26900.3	1.3e-67	54.41	shikimate kinase like 1	[more]
AT2G21940.1	8.9e-32	33.01	shikimate kinase 1	[more]
AT2G21940.2	8.9e-32	33.01	shikimate kinase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01100	SHIKIMTKNASE	coord: 161..169 score: 53.85 coord: 199..216 score: 16.24 coord: 132..145 score: 28.02 coord: 108..123 score: 34.62 coord: 179..188 score: 39.23
None	No IPR available	PANTHER	PTHR21087	SHIKIMATE KINASE	coord: 21..305
None	No IPR available	PANTHER	PTHR21087:SF4	INACTIVE SHIKIMATE KINASE LIKE 1, CHLOROPLASTIC-RELATED	coord: 21..305
IPR031322	Shikimate kinase/gluconokinase	PFAM	PF01202	SKI	coord: 116..258 e-value: 4.4E-25 score: 88.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 90..303 e-value: 2.5E-50 score: 173.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 111..248
IPR008153	Gamma-adaptin ear (GAE) domain	PROSITE	PS50180	GAE	coord: 1..87 score: 10.787049
IPR000623	Shikimate kinase/Threonine synthase-like 1	HAMAP	MF_00109	Shikimate_kinase	coord: 105..268 score: 16.856422

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G16020.1	Clc05G16020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0016310	phosphorylation
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0016301	kinase activity