Clc05G15670 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAGATTGTAATTATGAAAAATATACGAGGTCAATTTGGTCATAACGTTGTTTAAAAACCCAAAAGATCCTTGGTCTTTACTCCTCTGTCTTCCCCCTGTCGCTCGGCTTCTCAGCCAAGCAGATATAAAGACTGTTCTCTCTCACAATTCTGGATCCCTAAATCTAGGGCTTCTTACTCTGAGGTAAGTCTTCAAATCCACAAAATTCTCGCCTCTCGTTTCGTTTCGGATTAATTTTCCAACTTCTTTCCTTTTCTGTTCATACTCGGTGATTTCCCCTTACTCTTTTAACTCCACTTTTTGCTGATTTCGCATTCAATCGTCTCTTTAGTTGTCTTTTCCCGATCTCGGTTTTTCTTTCTTCTGGGTCTTGTTTGTTTATCTTTTGAACTCTCACGTTTGTAAGCTATGTTGTGTTTGTGGGGAATTCTTAATTTCCATATTTGGAGTTGTGTATTGCATGGATGAGGATTTCGTATTTCTTGACTGTGTTCTTTGTTTTCAAGGGAATCTGGAAACGTGTAAACAAATGAGAAATGTTGTGAAATGAGTAGTGGAATGTTTTTTTTTTTAATCTACTTGAGGTCATGATTGACTTTGTTTTGAATTTGTGTGATGGGTTTGAATTGTGAATTGGAGATGGATTTTTTCTATGGGTTTCTTAGATGATTTTTTTTATTACTTTCATTTCGCTTGGCTGGATAGAGAGGTTTTGATCTGTGTACCTTCAAATGGTGTTTCTTGAACTGTTTTCAACTGCATGCTTATCATTGAAATTTCTGCCTTTTGTTGGGGGTGATATTCTGTCTTCTTAATGGTCCTGGAAATGAACTTTGAGAGTTGTTTCCACCATCATGCTAGTTTGTTAAGTAGTGCAATGGAAGTTTTCCACGGCTCACTTGTGTTTTATGTAGCGACGTAGTTTCATTTGGGGTTTCATTTTTCTTGGCAAGGGTTCGTTTGATAAACGGATCAATTGCTTTTGTTTGCTTTTCCCTGTAAAAAGATCTTATTCTGAATCAAATTCATCTTCTTCATCCCCCCACAAAAAAATAAAAATAAAAATAAAGTAAAATTATTATAAATAGAAAAAATATCAAACTCTTTACGAATATAGAAAAATTTCACTGTCTATCATCGCTAGAGTGATAGACTTATATTGCTAGAGTGATAGAAGTCTATTGTTGGAGTGATAGAAGTCTATTGTTCTCTATCTTGTTGATAGACAATGAAACTTTAAATAGTTTGGCTCATTTTGCTATATTTGAAAACAATCCTAAAATAAAATAAAATAAAAATAAAAATAAAAATAAAAATAAAAATAGTTGTTCTACACCTCAGTACTACTGCCGCTAGGTTGTTATAATCATTGTTTCATTATAAGTTATTATTTTACTCATCTCTCACTCTCTGGATGATTAGATTTAACTTATTTCTATTTTCCTCGTTATTGTGTAAAGGGATCTTTGTTCATTCATCGTGATCACAATCAAGTGCTGCAAGATGGATGGTTCATATAGCTTTTGGCAATTGGGAGATGAGCTGCGAGGTCAGACGAAAGTCTCTGAGGATCATAAATGGTTATGGGCTGCATCTAAACTGGCTGAGCAGACAAGATCAAAGGGGGAGCACCTGAATAACCTTGATTTTTCAAAGAGCTCTCTTGATGCAAGGCCAAGGGAAAAGTTTGGTTTTCAGGAAGATAACAAATTTGAAAGCTTCAACTTTAACATGTTGAGCCTGGATTCAAAAATTACTGACCCTGTTAACAAAAGTTCATTGAGGAATGGAACTTACAACATGAGTGCAGTTTATGGCAAAAACAATACAAATGTTGCTGGAAATCTGCCTGGTACCAAGTACAGTGGCAATGACTATGTCAACAAAGATCTTACCAATTACAGCAGTGCCAACAATAACATTGGTGAAAATGCTAACTCCATCAATGCCGCTGACAAAAGATTCAAGACATTGCCAGCAACAGAGACGCTGCCCAGAAATGAAGTGCTCGGTGGATACATCTTTGTCTGTAACAATGATACCATGCAGGAAGACTTAAAGAGACAACTTTTTGGTAATTGTCCTTTTCCCCTGTTTATTTTTTCTGACCTTGGAGACGTCATGTAGGAGTAACTGTATGTTTATTATGCTGCATATCTCATATTTGCATTTTGTTTACTGTGTGTGCTTATCAAGATGAACTGTTGGAAATTTTGAACTAATTTGCTTGGAAGAATTTTAATACGTTTCACTCATTAAATGGATAACTAGAACTTTATGTTCAAACCTGTAATACACTGTGGCTAGGTTATGGGAAATGGTTAGCGGCACAATCTCATATGCTTTATTCTTTGTGTGTTTTGCAGGTTTGCCTCCAAGATATCGGGATTCAGTGCGTGCAATAACTCCGGGCTTGCCTCTGTTTCTCTATAACTACACCACCCATCAGTTACATGGCATTTTTGAGGTCTGTTATCTTTATATTTACATACTTTTCCAGTTACTTACATCATGTCAAACATCTTCTCAAGTCTTGGTTTTGTATACTATATTTGTGTTTACAATAAGATGTGATAACTGATAAAGAACATACCAGTAGCCATTATGACATGGAATACATTCATGTCAAAATGGCTCATTTCTGGAAGAATCTCTTTTTTCTTTTTTCCCCCCTATATTTACAGTTTCATAAATGCCATGCCAGTTAGATAGTAGATGTTATATGTCCTTTGTTACTGAAGAATCTTTAATTATTAATATTTTTGGACATTGAACTCATATAAGGGAAAAGTGAAATCTTGATTGAAGTTCATATTTTTCTTGGAGGTAGTTGTTTGGTAACTGGATTTGAATTCTGCTACTTATTTGGTTCACGATTGGCTACTGCAGGCAGCAAGTTTTGGGGGCTCCAACATTGATCCAACTGCTTGGGAAGACAAGAAATGTAAAGGCGAGTCCAGGTTTCCAGCTCAGGTAGAGTCTCAGCTGCAGTATTCCATTTTCTTGTTCAACTGTTCGTAGGTGGCTTATAATTTGCTAATAGAAGTCTCTTTTTCTCAAAAATTAGGTAAGAATCCGCATTAGAAAACTCTGCAGGGCGTTAGAAGAAGATTCCTTCAGGCCAGTCTTGCACCACTATGATGGTCCAAAATTCCGTCTCGAACTATCGATCCCTGAGGTACTGCAAAATTCCCCCCTCCAATTGTGGATTGAGTTATTATATCTCATCTTCCTCGTTCTTCTCTCCAGTTGTTAAGTTTCTTTCTCCCCTCCCCCTTCACCTCCCCTCGTATGTTTCAAATACTTATTTGTGTATAAGTTTGTTTTCTGGTGGTGCAGACATTGGATCTTCTAGACCTGTGTGAGCAGGCGGGTTCAGCATCATAAGCTAAGCAACAACGACAAGCTTATGCATCACAGAGAATGGTGAATGAAGAGGGCTCAATGGTTCCTGTCAGCTAAGGCTAAGACACAGATTTTTCAAAGAGCGCAAGCTTAGGATGAGTCTGATCAAGCAGCGAGTAGTGAGTTTGGCGAGTGAAGGCTTAAGCCAAAATAAGTAAGGGAAAAAAAAATTGTATGTTCTTGTATTATTGTATTGTATCATCAGACAAGGTGAGTAGATAATGTAATAGTGAATGATAGAGCCATATATATGGATAAAAAAAATGCAGCCATATTTAAGGCTTGTGTGTTTCTTTTGATTGAAAAGACTATTTTATGAGTTGGTGTAACACAACAGGCAATGTTATCTTCTTTCTAAATTCATATTCAAATCTCAAAAACAAGAATAAATTTTTACAAATTTTAGCCTTGATGGATAACGATTGTTAGAGTTGGTATTGACTTATAAGATTGCCTGGCTTGTGTCTCAAGAGTTGTT CAAAGATTGTAATTATGAAAAATATACGAGGTCAATTTGGTCATAACGTTGTTTAAAAACCCAAAAGATCCTTGGTCTTTACTCCTCTGTCTTCCCCCTGTCGCTCGGCTTCTCAGCCAAGCAGATATAAAGACTGTTCTCTCTCACAATTCTGGATCCCTAAATCTAGGGCTTCTTACTCTGAGGGATCTTTGTTCATTCATCGTGATCACAATCAAGTGCTGCAAGATGGATGGTTCATATAGCTTTTGGCAATTGGGAGATGAGCTGCGAGGTCAGACGAAAGTCTCTGAGGATCATAAATGGTTATGGGCTGCATCTAAACTGGCTGAGCAGACAAGATCAAAGGGGGAGCACCTGAATAACCTTGATTTTTCAAAGAGCTCTCTTGATGCAAGGCCAAGGGAAAAGTTTGGTTTTCAGGAAGATAACAAATTTGAAAGCTTCAACTTTAACATGTTGAGCCTGGATTCAAAAATTACTGACCCTGTTAACAAAAGTTCATTGAGGAATGGAACTTACAACATGAGTGCAGTTTATGGCAAAAACAATACAAATGTTGCTGGAAATCTGCCTGGTACCAAGTACAGTGGCAATGACTATGTCAACAAAGATCTTACCAATTACAGCAGTGCCAACAATAACATTGGTGAAAATGCTAACTCCATCAATGCCGCTGACAAAAGATTCAAGACATTGCCAGCAACAGAGACGCTGCCCAGAAATGAAGTGCTCGGTGGATACATCTTTGTCTGTAACAATGATACCATGCAGGAAGACTTAAAGAGACAACTTTTTGGTTTGCCTCCAAGATATCGGGATTCAGTGCGTGCAATAACTCCGGGCTTGCCTCTGTTTCTCTATAACTACACCACCCATCAGTTACATGGCATTTTTGAGGCAGCAAGTTTTGGGGGCTCCAACATTGATCCAACTGCTTGGGAAGACAAGAAATGTAAAGGCGAGTCCAGGTTTCCAGCTCAGGTAAGAATCCGCATTAGAAAACTCTGCAGGGCGTTAGAAGAAGATTCCTTCAGGCCAGTCTTGCACCACTATGATGGTCCAAAATTCCGTCTCGAACTATCGATCCCTGAGACATTGGATCTTCTAGACCTGTGTGAGCAGGCGGGTTCAGCATCATAAGCTAAGCAACAACGACAAGCTTATGCATCACAGAGAATGGTGAATGAAGAGGGCTCAATGGTTCCTGTCAGCTAAGGCTAAGACACAGATTTTTCAAAGAGCGCAAGCTTAGGATGAGTCTGATCAAGCAGCGAGTAGTGAGTTTGGCGAGTGAAGGCTTAAGCCAAAATAAGTAAGGGAAAAAAAAATTGTATGTTCTTGTATTATTGTATTGTATCATCAGACAAGGTGAGTAGATAATGTAATAGTGAATGATAGAGCCATATATATGGATAAAAAAAATGCAGCCATATTTAAGGCTTGTGTGTTTCTTTTGATTGAAAAGACTATTTTATGAGTTGGTGTAACACAACAGGCAATGTTATCTTCTTTCTAAATTCATATTCAAATCTCAAAAACAAGAATAAATTTTTACAAATTTTAGCCTTGATGGATAACGATTGTTAGAGTTGGTATTGACTTATAAGATTGCCTGGCTTGTGTCTCAAGAGTTGTT ATGGATGGTTCATATAGCTTTTGGCAATTGGGAGATGAGCTGCGAGGTCAGACGAAAGTCTCTGAGGATCATAAATGGTTATGGGCTGCATCTAAACTGGCTGAGCAGACAAGATCAAAGGGGGAGCACCTGAATAACCTTGATTTTTCAAAGAGCTCTCTTGATGCAAGGCCAAGGGAAAAGTTTGGTTTTCAGGAAGATAACAAATTTGAAAGCTTCAACTTTAACATGTTGAGCCTGGATTCAAAAATTACTGACCCTGTTAACAAAAGTTCATTGAGGAATGGAACTTACAACATGAGTGCAGTTTATGGCAAAAACAATACAAATGTTGCTGGAAATCTGCCTGGTACCAAGTACAGTGGCAATGACTATGTCAACAAAGATCTTACCAATTACAGCAGTGCCAACAATAACATTGGTGAAAATGCTAACTCCATCAATGCCGCTGACAAAAGATTCAAGACATTGCCAGCAACAGAGACGCTGCCCAGAAATGAAGTGCTCGGTGGATACATCTTTGTCTGTAACAATGATACCATGCAGGAAGACTTAAAGAGACAACTTTTTGGTTTGCCTCCAAGATATCGGGATTCAGTGCGTGCAATAACTCCGGGCTTGCCTCTGTTTCTCTATAACTACACCACCCATCAGTTACATGGCATTTTTGAGGCAGCAAGTTTTGGGGGCTCCAACATTGATCCAACTGCTTGGGAAGACAAGAAATGTAAAGGCGAGTCCAGGTTTCCAGCTCAGGTAAGAATCCGCATTAGAAAACTCTGCAGGGCGTTAGAAGAAGATTCCTTCAGGCCAGTCTTGCACCACTATGATGGTCCAAAATTCCGTCTCGAACTATCGATCCCTGAGACATTGGATCTTCTAGACCTGTGTGAGCAGGCGGGTTCAGCATCATAA MDGSYSFWQLGDELRGQTKVSEDHKWLWAASKLAEQTRSKGEHLNNLDFSKSSLDARPREKFGFQEDNKFESFNFNMLSLDSKITDPVNKSSLRNGTYNMSAVYGKNNTNVAGNLPGTKYSGNDYVNKDLTNYSSANNNIGENANSINAADKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKLCRALEEDSFRPVLHHYDGPKFRLELSIPETLDLLDLCEQAGSAS Homology
BLAST of Clc05G15670 vs. NCBI nr
Match: XP_038897034.1 (B2 protein [Benincasa hispida]) HSP 1 Score: 611.7 bits (1576), Expect = 3.5e-171 Identity = 297/304 (97.70%), Postives = 300/304 (98.68%), Query Frame = 0
BLAST of Clc05G15670 vs. NCBI nr
Match: KAG6581097.1 (hypothetical protein SDJN03_21099, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 605.1 bits (1559), Expect = 3.2e-169 Identity = 291/304 (95.72%), Postives = 299/304 (98.36%), Query Frame = 0
BLAST of Clc05G15670 vs. NCBI nr
Match: KAG7017827.1 (hypothetical protein SDJN02_19693 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 605.1 bits (1559), Expect = 3.2e-169 Identity = 291/304 (95.72%), Postives = 299/304 (98.36%), Query Frame = 0
BLAST of Clc05G15670 vs. NCBI nr
Match: XP_023527538.1 (B2 protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 605.1 bits (1559), Expect = 3.2e-169 Identity = 292/304 (96.05%), Postives = 298/304 (98.03%), Query Frame = 0
BLAST of Clc05G15670 vs. NCBI nr
Match: XP_008450102.1 (PREDICTED: B2 protein [Cucumis melo]) HSP 1 Score: 603.6 bits (1555), Expect = 9.4e-169 Identity = 291/304 (95.72%), Postives = 298/304 (98.03%), Query Frame = 0
BLAST of Clc05G15670 vs. ExPASy Swiss-Prot
Match: C6TAQ0 (DCD domain-containing protein NRP-B OS=Glycine max OX=3847 GN=NRP-B PE=2 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 1.3e-75 Identity = 168/331 (50.76%), Postives = 202/331 (61.03%), Query Frame = 0
BLAST of Clc05G15670 vs. ExPASy Swiss-Prot
Match: P37707 (B2 protein OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 3.7e-75 Identity = 134/174 (77.01%), Postives = 151/174 (86.78%), Query Frame = 0
BLAST of Clc05G15670 vs. ExPASy Swiss-Prot
Match: Q8RXN8 (DCD domain-containing protein NRP OS=Arabidopsis thaliana OX=3702 GN=NRP PE=1 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 3.5e-73 Identity = 150/255 (58.82%), Postives = 175/255 (68.63%), Query Frame = 0
BLAST of Clc05G15670 vs. ExPASy Swiss-Prot
Match: Q5JZR1 (DCD domain-containing protein NRP-A OS=Glycine max OX=3847 GN=NRP-A PE=2 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 1.0e-72 Identity = 160/362 (44.20%), Postives = 204/362 (56.35%), Query Frame = 0
BLAST of Clc05G15670 vs. ExPASy TrEMBL
Match: A0A1S3BP62 (B2 protein OS=Cucumis melo OX=3656 GN=LOC103491791 PE=4 SV=1) HSP 1 Score: 603.6 bits (1555), Expect = 4.6e-169 Identity = 291/304 (95.72%), Postives = 298/304 (98.03%), Query Frame = 0
BLAST of Clc05G15670 vs. ExPASy TrEMBL
Match: A0A0A0LB43 (DCD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G585860 PE=4 SV=1) HSP 1 Score: 602.4 bits (1552), Expect = 1.0e-168 Identity = 291/304 (95.72%), Postives = 298/304 (98.03%), Query Frame = 0
BLAST of Clc05G15670 vs. ExPASy TrEMBL
Match: A0A6J1J1D1 (B2 protein-like OS=Cucurbita maxima OX=3661 GN=LOC111482521 PE=4 SV=1) HSP 1 Score: 599.4 bits (1544), Expect = 8.6e-168 Identity = 288/304 (94.74%), Postives = 296/304 (97.37%), Query Frame = 0
BLAST of Clc05G15670 vs. ExPASy TrEMBL
Match: A0A6J1DQT8 (B2 protein OS=Momordica charantia OX=3673 GN=LOC111023391 PE=4 SV=1) HSP 1 Score: 599.4 bits (1544), Expect = 8.6e-168 Identity = 289/304 (95.07%), Postives = 298/304 (98.03%), Query Frame = 0
BLAST of Clc05G15670 vs. ExPASy TrEMBL
Match: A0A6J1F9B6 (B2 protein-like OS=Cucurbita moschata OX=3662 GN=LOC111442004 PE=4 SV=1) HSP 1 Score: 597.4 bits (1539), Expect = 3.3e-167 Identity = 288/304 (94.74%), Postives = 296/304 (97.37%), Query Frame = 0
BLAST of Clc05G15670 vs. TAIR 10
Match: AT3G27090.1 (DCD (Development and Cell Death) domain protein ) HSP 1 Score: 446.8 bits (1148), Expect = 1.4e-125 Identity = 218/299 (72.91%), Postives = 248/299 (82.94%), Query Frame = 0
BLAST of Clc05G15670 vs. TAIR 10
Match: AT5G42050.1 (DCD (Development and Cell Death) domain protein ) HSP 1 Score: 276.6 bits (706), Expect = 2.5e-74 Identity = 150/255 (58.82%), Postives = 175/255 (68.63%), Query Frame = 0
BLAST of Clc05G15670 vs. TAIR 10
Match: AT5G01660.1 (CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133 Blast hits to 7053 proteins in 482 species: Archae - 40; Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants - 1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI BLink). ) HSP 1 Score: 105.1 bits (261), Expect = 9.8e-23 Identity = 54/127 (42.52%), Postives = 73/127 (57.48%), Query Frame = 0
BLAST of Clc05G15670 vs. TAIR 10
Match: AT3G11000.1 (DCD (Development and Cell Death) domain protein ) HSP 1 Score: 103.6 bits (257), Expect = 2.9e-22 Identity = 58/136 (42.65%), Postives = 77/136 (56.62%), Query Frame = 0
BLAST of Clc05G15670 vs. TAIR 10
Match: AT3G11000.2 (DCD (Development and Cell Death) domain protein ) HSP 1 Score: 103.6 bits (257), Expect = 2.9e-22 Identity = 58/136 (42.65%), Postives = 77/136 (56.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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