Clc05G15330 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCGATGCTTCAAAAGCTCATCAGAAAATCGCCACCCCCAAGATTAATTGCTGCTCTGGGTGCCCAGACCTCTCAAAATCTCTCAACACCCTACATTCTTCACCAGCCGCATGATTCTGATAAGAAACCAAGCGGGCATTCCGATTCTAATTTAATCTCTGTTTCTTCTTCGAATCCATCTCACTTTTCCCAGTTTTACCCTAGTTTCCCATTTGGGCTTTGCTTGCCGCAAATCTCCTCAACTGGGTTGCTTCCGTTCGAGCCTGATTTTGTTGAGCAAGACGATTCTCGGATGTTGTGGGCTGATAGCGTGAAGAAGAAGAGGAAACGGAAGATGAACAAGCATAAGTACAAGAAGCTAAGGAAGCGGCTCCGAAGACAGACATAGTTACTTTATTTGGTAAGACTATATTTTTCTATAGTCTTGTAGAATGGGCTAAATGAATTTCCTTAGTTGTGGTTCGCTAGAGGCAAATTCTTAGAGATATATCGTTTCAAGCTCAAGGCAAGCTTTTCACAGAACAGATTTGCTTTTCATTTTCCGGAATAAGTTTGGAAGTGTTCTGTTAACTTGAAGTAGAAATGGTTCATATTGGTAAATTAGTGATTCATACAATCTGAGTAGGGGTTTATTGCAGATTTTGTTTTGATTTTGCTTTTGTTTTAAGATTGATACTAATGTAAGATGAGGGGTTGTTATCCAGTTTATTCCTACTGGATCTCTGTAATGCCTAAGTTTTCTGGTAATACGATTAGACCTTATTGGTTCTGAATAATCAAGCTGCATTTTTGCTGGCGATCAAATGGTGGTACTGGCAGTATATTTGTTTCTGTACTTTGTTTTATCATCTATTAATCTATGAGCCTCCAGATGGCATCTTCTTGTGTATGTTTATAAGTTTTCTCTGTAAGAAAATTCAAAGAAACTGAGTTCTTTTGAAGTGGTTTTATGCTCTTTGATTGGCGGTATGGAGAGGGGTGATGGGATATTAATGTCCTTGGGAATTTTTCTTATGACAAGGACAGCGTTGCTGAAACTTTAGACCATGTAAAATTTTCACTGAAACTGATATATCTTCAGATGTTGGACTTCTCTTTTTTGAACGACTACCTTTTGTCTCTCATCCTACCTCTACTTCAATGCCAACCCTCCATCCCTTTGAAAGAAAAAAGGAAAAAAAAAGGATTGCATTTGGACTTCCTTATTTTTACTGTAGTTCCTTTTTCTATGGGATCTTGAAATTGATCACACGGGCATCAGAATGCAAGGAACACAAGCCAATATATTCCAATTAGATTGCACTATGATGAGTTAGTCCGTATGTAAGGTGTAACAGTTTGTTCTATTTGTTCTTTGATAGGTAAAGATGACTTTGGTTTGTTCTTCTAGCAACTTTCTTGGTCTTCCACTCTGATTGGCATTCATAACGAGTTATCATAAATATAACTTGCCTAGAATCATGTTCCTCATAATTAACACTGCCTATAATCTTGAAATTTTGCTGAAGTTGAAATCTTACTGGTTGGATTAATATCACTAAGACTCTAAAAGTTGATCGATGGAAACTCATTAGACAAGCTTGTGGTGAGAACATTGATTCACAGGCTGGAAAAGGATTTGATGATGTTGGAAGATGCACTTCCATTGTTAGCTAAGACTTGTTAGTTAATTGAGGTAGCAGATACAACCTCAATAACCTGATATGAATTTTGAAATTGAGGTTGAAGCTTGAAAATTTGGTAAATCATTCCTGCATAGGCATGTTAAGGCCGTGGTAATATAGAAAGATACACTTCCATTGTAAACGAATACTTTGTTAGTTGATATAAAATAAGCAGATTTCATGTGATCAACTATTTGAAATTGAGGGAGAAGCTCGAGAATGCTCTAGGATTCAATATTTCCAATATTTGGAACCAATTATTGCTGTTGGGAGTGTACTGATGTAATGATTGACAGGAGTTGACAACAATGACCTGATATGCTTTGGTTTTCTATCTCCTGCTGTGACACATATATGAAAGGTTTCTTTTCCAGAATGTATTGTCATTCTTGTTTGATGTAATTGTAGAGGGCTTGTCCCAATCACTAAGGTATGATGTAGACCATATACTTGCTGCCTCCATCTTTTTGCAATCTACCACTTGGCAACTTCGTTTTCTTCTCGGTTCAATCTGAGTATGGTAGAAATATCATTTTACCTGCTGAGTGGCCCCATAAATTTGACAAATTTGTTTGCTCTCTTGATAAGAAAGACTCTTATACATGTTATTAGGCTAAAAAACTGTTTGATTGTAACTAAACTGGTGTAGCTGCTAAACCTGATCATCGATGATGTGCTTGATGTATTTTGTGAACCCTGAACCCCCTGAACCTTCAGAACCAAGCAAAGAAATATGTGAGGCAAATTCAGATTCTCTGCCATAGATGGGGGACATATCTCATCATCCCATCACTACAACGAAAAAGAAGAGGTAGGATCGCAGAGACCCACAACTTCTTTTCTTCTATTCTTTTACATAAAACATGGGACCCCCACTCCCTTTATTCTGCCCATAGCTTCATTTCTACTTCCTAGTTATCTTTCCCCTTATATTTAGTTGTTATTTAGTCACTTTCAAAAATAAGAGGTTGATGTTTGCTTTATGATCTTGATTTGAAGCTTTTCTCCTTAATTTTGGGCCCATGTATTGTGGCTGATATTATGACATGGATTATTATTTTTTTTTTCATGAAAAACTTTTTGTGGGGGTCTGGAACAAAAATATTTTTGAATTTCAGGAAATCAATGCTTGTGATTAGTTTTGACTAAATTTCCACCTAGTACATGCATATCTCATACCAAGATCTCTCCTAAGCCCTTTTATACTGTGAATTAAGTTTGATAAATTTAGCTAGTGAACTTTTTGATCTCTATGATTTGGATAGAGGAAATAATCATTCCTTTCCCATGTGCCTACTGTGGATTGTTTTCTTCACTGTAATTGAGAATGATTTTTACCATTGCTGCAATTGATCAGGTTGGAGCTGATGGGACTTGAGAGGTCAGGAAGAGTTTTCTTTCCTCCTTCACCAACAAATCGATATGTTCCTGTATTTGCTTAGTCGAACAATTCTTGACCGTTTGAATTTCCTTTGACAAAAAACAATCAACTTGAGATACAAAGCTTGAAATGGAAAGACTTGTCTATACAATTGTTCCTGTCGAGAAGAGTAATTTACTTAAAATAAATTATAGGGAATACACC ATGGCGTCGATGCTTCAAAAGCTCATCAGAAAATCGCCACCCCCAAGATTAATTGCTGCTCTGGGTGCCCAGACCTCTCAAAATCTCTCAACACCCTACATTCTTCACCAGCCGCATGATTCTGATAAGAAACCAAGCGGGCATTCCGATTCTAATTTAATCTCTGTTTCTTCTTCGAATCCATCTCACTTTTCCCAGTTTTACCCTAGTTTCCCATTTGGGCTTTGCTTGCCGCAAATCTCCTCAACTGGGTTGCTTCCGTTCGAGCCTGATTTTGTTGAGCAAGACGATTCTCGGATGTTGTGGGCTGATAGCGTGAAGAAGAAGAGGAAACGGAAGATGAACAAGCATAAGTTGGAGCTGATGGGACTTGAGAGGTCAGGAAGAGTTTTCTTTCCTCCTTCACCAACAAATCGATATGTTCCTGTATTTGCTTAGTCGAACAATTCTTGACCGTTTGAATTTCCTTTGACAAAAAACAATCAACTTGAGATACAAAGCTTGAAATGGAAAGACTTGTCTATACAATTGTTCCTGTCGAGAAGAGTAATTTACTTAAAATAAATTATAGGGAATACACC ATGGCGTCGATGCTTCAAAAGCTCATCAGAAAATCGCCACCCCCAAGATTAATTGCTGCTCTGGGTGCCCAGACCTCTCAAAATCTCTCAACACCCTACATTCTTCACCAGCCGCATGATTCTGATAAGAAACCAAGCGGGCATTCCGATTCTAATTTAATCTCTGTTTCTTCTTCGAATCCATCTCACTTTTCCCAGTTTTACCCTAGTTTCCCATTTGGGCTTTGCTTGCCGCAAATCTCCTCAACTGGGTTGCTTCCGTTCGAGCCTGATTTTGTTGAGCAAGACGATTCTCGGATGTTGTGGGCTGATAGCGTGAAGAAGAAGAGGAAACGGAAGATGAACAAGCATAAGTTGGAGCTGATGGGACTTGAGAGGTCAGGAAGAGTTTTCTTTCCTCCTTCACCAACAAATCGATATGTTCCTGTATTTGCTTAG MASMLQKLIRKSPPPRLIAALGAQTSQNLSTPYILHQPHDSDKKPSGHSDSNLISVSSSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDFVEQDDSRMLWADSVKKKRKRKMNKHKLELMGLERSGRVFFPPSPTNRYVPVFA Homology
BLAST of Clc05G15330 vs. NCBI nr
Match: KAA0056277.1 (DUF1713 domain-containing protein [Cucumis melo var. makuwa] >TYK05222.1 DUF1713 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 204.1 bits (518), Expect = 7.9e-49 Identity = 104/118 (88.14%), Postives = 107/118 (90.68%), Query Frame = 0
BLAST of Clc05G15330 vs. NCBI nr
Match: KAE8650785.1 (hypothetical protein Csa_017463 [Cucumis sativus]) HSP 1 Score: 203.8 bits (517), Expect = 1.0e-48 Identity = 103/118 (87.29%), Postives = 106/118 (89.83%), Query Frame = 0
BLAST of Clc05G15330 vs. NCBI nr
Match: XP_011651574.1 (uncharacterized protein LOC101220058 [Cucumis sativus]) HSP 1 Score: 203.8 bits (517), Expect = 1.0e-48 Identity = 103/118 (87.29%), Postives = 106/118 (89.83%), Query Frame = 0
BLAST of Clc05G15330 vs. NCBI nr
Match: KAG7017804.1 (hypothetical protein SDJN02_19670, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 198.7 bits (504), Expect = 3.3e-47 Identity = 100/118 (84.75%), Postives = 104/118 (88.14%), Query Frame = 0
BLAST of Clc05G15330 vs. NCBI nr
Match: XP_023526336.1 (uncharacterized protein LOC111789858 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 197.2 bits (500), Expect = 9.7e-47 Identity = 99/118 (83.90%), Postives = 104/118 (88.14%), Query Frame = 0
BLAST of Clc05G15330 vs. ExPASy TrEMBL
Match: A0A5A7UNU9 (DUF1713 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00280 PE=4 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 3.8e-49 Identity = 104/118 (88.14%), Postives = 107/118 (90.68%), Query Frame = 0
BLAST of Clc05G15330 vs. ExPASy TrEMBL
Match: A0A0A0LDP0 (DUF1713 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G592160 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 5.0e-49 Identity = 103/118 (87.29%), Postives = 106/118 (89.83%), Query Frame = 0
BLAST of Clc05G15330 vs. ExPASy TrEMBL
Match: A0A6J1F832 (uncharacterized protein LOC111441723 OS=Cucurbita moschata OX=3662 GN=LOC111441723 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 4.7e-47 Identity = 99/118 (83.90%), Postives = 104/118 (88.14%), Query Frame = 0
BLAST of Clc05G15330 vs. ExPASy TrEMBL
Match: A0A6J1J7I5 (uncharacterized protein LOC111482461 OS=Cucurbita maxima OX=3661 GN=LOC111482461 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 2.9e-44 Identity = 96/118 (81.36%), Postives = 101/118 (85.59%), Query Frame = 0
BLAST of Clc05G15330 vs. ExPASy TrEMBL
Match: A0A6J1EJL0 (uncharacterized protein LOC111435191 OS=Cucurbita moschata OX=3662 GN=LOC111435191 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 1.1e-43 Identity = 94/118 (79.66%), Postives = 102/118 (86.44%), Query Frame = 0
BLAST of Clc05G15330 vs. TAIR 10
Match: AT5G63150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1713, mitochondria (InterPro:IPR013177); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 53.1 bits (126), Expect = 2.1e-07 Identity = 35/81 (43.21%), Postives = 50/81 (61.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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