Clc05G15330 (gene) Watermelon (cordophanus) v2

Overview
NameClc05G15330
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionDUF1713 domain-containing protein
LocationClcChr05: 17596670 .. 17599923 (-)
RNA-Seq ExpressionClc05G15330
SyntenyClc05G15330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCGATGCTTCAAAAGCTCATCAGAAAATCGCCACCCCCAAGATTAATTGCTGCTCTGGGTGCCCAGACCTCTCAAAATCTCTCAACACCCTACATTCTTCACCAGCCGCATGATTCTGATAAGAAACCAAGCGGGCATTCCGATTCTAATTTAATCTCTGTTTCTTCTTCGAATCCATCTCACTTTTCCCAGTTTTACCCTAGTTTCCCATTTGGGCTTTGCTTGCCGCAAATCTCCTCAACTGGGTTGCTTCCGTTCGAGCCTGATTTTGTTGAGCAAGACGATTCTCGGATGTTGTGGGCTGATAGCGTGAAGAAGAAGAGGAAACGGAAGATGAACAAGCATAAGTACAAGAAGCTAAGGAAGCGGCTCCGAAGACAGACATAGTTACTTTATTTGGTAAGACTATATTTTTCTATAGTCTTGTAGAATGGGCTAAATGAATTTCCTTAGTTGTGGTTCGCTAGAGGCAAATTCTTAGAGATATATCGTTTCAAGCTCAAGGCAAGCTTTTCACAGAACAGATTTGCTTTTCATTTTCCGGAATAAGTTTGGAAGTGTTCTGTTAACTTGAAGTAGAAATGGTTCATATTGGTAAATTAGTGATTCATACAATCTGAGTAGGGGTTTATTGCAGATTTTGTTTTGATTTTGCTTTTGTTTTAAGATTGATACTAATGTAAGATGAGGGGTTGTTATCCAGTTTATTCCTACTGGATCTCTGTAATGCCTAAGTTTTCTGGTAATACGATTAGACCTTATTGGTTCTGAATAATCAAGCTGCATTTTTGCTGGCGATCAAATGGTGGTACTGGCAGTATATTTGTTTCTGTACTTTGTTTTATCATCTATTAATCTATGAGCCTCCAGATGGCATCTTCTTGTGTATGTTTATAAGTTTTCTCTGTAAGAAAATTCAAAGAAACTGAGTTCTTTTGAAGTGGTTTTATGCTCTTTGATTGGCGGTATGGAGAGGGGTGATGGGATATTAATGTCCTTGGGAATTTTTCTTATGACAAGGACAGCGTTGCTGAAACTTTAGACCATGTAAAATTTTCACTGAAACTGATATATCTTCAGATGTTGGACTTCTCTTTTTTGAACGACTACCTTTTGTCTCTCATCCTACCTCTACTTCAATGCCAACCCTCCATCCCTTTGAAAGAAAAAAGGAAAAAAAAAGGATTGCATTTGGACTTCCTTATTTTTACTGTAGTTCCTTTTTCTATGGGATCTTGAAATTGATCACACGGGCATCAGAATGCAAGGAACACAAGCCAATATATTCCAATTAGATTGCACTATGATGAGTTAGTCCGTATGTAAGGTGTAACAGTTTGTTCTATTTGTTCTTTGATAGGTAAAGATGACTTTGGTTTGTTCTTCTAGCAACTTTCTTGGTCTTCCACTCTGATTGGCATTCATAACGAGTTATCATAAATATAACTTGCCTAGAATCATGTTCCTCATAATTAACACTGCCTATAATCTTGAAATTTTGCTGAAGTTGAAATCTTACTGGTTGGATTAATATCACTAAGACTCTAAAAGTTGATCGATGGAAACTCATTAGACAAGCTTGTGGTGAGAACATTGATTCACAGGCTGGAAAAGGATTTGATGATGTTGGAAGATGCACTTCCATTGTTAGCTAAGACTTGTTAGTTAATTGAGGTAGCAGATACAACCTCAATAACCTGATATGAATTTTGAAATTGAGGTTGAAGCTTGAAAATTTGGTAAATCATTCCTGCATAGGCATGTTAAGGCCGTGGTAATATAGAAAGATACACTTCCATTGTAAACGAATACTTTGTTAGTTGATATAAAATAAGCAGATTTCATGTGATCAACTATTTGAAATTGAGGGAGAAGCTCGAGAATGCTCTAGGATTCAATATTTCCAATATTTGGAACCAATTATTGCTGTTGGGAGTGTACTGATGTAATGATTGACAGGAGTTGACAACAATGACCTGATATGCTTTGGTTTTCTATCTCCTGCTGTGACACATATATGAAAGGTTTCTTTTCCAGAATGTATTGTCATTCTTGTTTGATGTAATTGTAGAGGGCTTGTCCCAATCACTAAGGTATGATGTAGACCATATACTTGCTGCCTCCATCTTTTTGCAATCTACCACTTGGCAACTTCGTTTTCTTCTCGGTTCAATCTGAGTATGGTAGAAATATCATTTTACCTGCTGAGTGGCCCCATAAATTTGACAAATTTGTTTGCTCTCTTGATAAGAAAGACTCTTATACATGTTATTAGGCTAAAAAACTGTTTGATTGTAACTAAACTGGTGTAGCTGCTAAACCTGATCATCGATGATGTGCTTGATGTATTTTGTGAACCCTGAACCCCCTGAACCTTCAGAACCAAGCAAAGAAATATGTGAGGCAAATTCAGATTCTCTGCCATAGATGGGGGACATATCTCATCATCCCATCACTACAACGAAAAAGAAGAGGTAGGATCGCAGAGACCCACAACTTCTTTTCTTCTATTCTTTTACATAAAACATGGGACCCCCACTCCCTTTATTCTGCCCATAGCTTCATTTCTACTTCCTAGTTATCTTTCCCCTTATATTTAGTTGTTATTTAGTCACTTTCAAAAATAAGAGGTTGATGTTTGCTTTATGATCTTGATTTGAAGCTTTTCTCCTTAATTTTGGGCCCATGTATTGTGGCTGATATTATGACATGGATTATTATTTTTTTTTTCATGAAAAACTTTTTGTGGGGGTCTGGAACAAAAATATTTTTGAATTTCAGGAAATCAATGCTTGTGATTAGTTTTGACTAAATTTCCACCTAGTACATGCATATCTCATACCAAGATCTCTCCTAAGCCCTTTTATACTGTGAATTAAGTTTGATAAATTTAGCTAGTGAACTTTTTGATCTCTATGATTTGGATAGAGGAAATAATCATTCCTTTCCCATGTGCCTACTGTGGATTGTTTTCTTCACTGTAATTGAGAATGATTTTTACCATTGCTGCAATTGATCAGGTTGGAGCTGATGGGACTTGAGAGGTCAGGAAGAGTTTTCTTTCCTCCTTCACCAACAAATCGATATGTTCCTGTATTTGCTTAGTCGAACAATTCTTGACCGTTTGAATTTCCTTTGACAAAAAACAATCAACTTGAGATACAAAGCTTGAAATGGAAAGACTTGTCTATACAATTGTTCCTGTCGAGAAGAGTAATTTACTTAAAATAAATTATAGGGAATACACC

mRNA sequence

ATGGCGTCGATGCTTCAAAAGCTCATCAGAAAATCGCCACCCCCAAGATTAATTGCTGCTCTGGGTGCCCAGACCTCTCAAAATCTCTCAACACCCTACATTCTTCACCAGCCGCATGATTCTGATAAGAAACCAAGCGGGCATTCCGATTCTAATTTAATCTCTGTTTCTTCTTCGAATCCATCTCACTTTTCCCAGTTTTACCCTAGTTTCCCATTTGGGCTTTGCTTGCCGCAAATCTCCTCAACTGGGTTGCTTCCGTTCGAGCCTGATTTTGTTGAGCAAGACGATTCTCGGATGTTGTGGGCTGATAGCGTGAAGAAGAAGAGGAAACGGAAGATGAACAAGCATAAGTTGGAGCTGATGGGACTTGAGAGGTCAGGAAGAGTTTTCTTTCCTCCTTCACCAACAAATCGATATGTTCCTGTATTTGCTTAGTCGAACAATTCTTGACCGTTTGAATTTCCTTTGACAAAAAACAATCAACTTGAGATACAAAGCTTGAAATGGAAAGACTTGTCTATACAATTGTTCCTGTCGAGAAGAGTAATTTACTTAAAATAAATTATAGGGAATACACC

Coding sequence (CDS)

ATGGCGTCGATGCTTCAAAAGCTCATCAGAAAATCGCCACCCCCAAGATTAATTGCTGCTCTGGGTGCCCAGACCTCTCAAAATCTCTCAACACCCTACATTCTTCACCAGCCGCATGATTCTGATAAGAAACCAAGCGGGCATTCCGATTCTAATTTAATCTCTGTTTCTTCTTCGAATCCATCTCACTTTTCCCAGTTTTACCCTAGTTTCCCATTTGGGCTTTGCTTGCCGCAAATCTCCTCAACTGGGTTGCTTCCGTTCGAGCCTGATTTTGTTGAGCAAGACGATTCTCGGATGTTGTGGGCTGATAGCGTGAAGAAGAAGAGGAAACGGAAGATGAACAAGCATAAGTTGGAGCTGATGGGACTTGAGAGGTCAGGAAGAGTTTTCTTTCCTCCTTCACCAACAAATCGATATGTTCCTGTATTTGCTTAG

Protein sequence

MASMLQKLIRKSPPPRLIAALGAQTSQNLSTPYILHQPHDSDKKPSGHSDSNLISVSSSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDFVEQDDSRMLWADSVKKKRKRKMNKHKLELMGLERSGRVFFPPSPTNRYVPVFA
Homology
BLAST of Clc05G15330 vs. NCBI nr
Match: KAA0056277.1 (DUF1713 domain-containing protein [Cucumis melo var. makuwa] >TYK05222.1 DUF1713 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 204.1 bits (518), Expect = 7.9e-49
Identity = 104/118 (88.14%), Postives = 107/118 (90.68%), Query Frame = 0

Query: 1   MASMLQKLIRKSPPPRLIAALGAQTSQNLSTPYILHQPHDSDKKPSGHSDSNLISVSSSN 60
           MASMLQKLIRKSPP RLIAALGAQTSQNLSTP+ILHQP D DKK   HS SNL S S+SN
Sbjct: 1   MASMLQKLIRKSPPSRLIAALGAQTSQNLSTPFILHQPLDFDKKSDAHSHSNLNSASTSN 60

Query: 61  PSHFSQFYPSFPFGLCLPQISSTGLLPFEPDFVEQDDSRMLWADSVKKKRKRKMNKHK 119
           PS FSQFYPSFPFGLCLPQISSTGLLPFEPD+VEQDDSR LWADSVKKKRKRKMNKHK
Sbjct: 61  PSQFSQFYPSFPFGLCLPQISSTGLLPFEPDYVEQDDSRKLWADSVKKKRKRKMNKHK 118

BLAST of Clc05G15330 vs. NCBI nr
Match: KAE8650785.1 (hypothetical protein Csa_017463 [Cucumis sativus])

HSP 1 Score: 203.8 bits (517), Expect = 1.0e-48
Identity = 103/118 (87.29%), Postives = 106/118 (89.83%), Query Frame = 0

Query: 1   MASMLQKLIRKSPPPRLIAALGAQTSQNLSTPYILHQPHDSDKKPSGHSDSNLISVSSSN 60
           MASMLQ LIRKSPP RLIAALGAQTSQNLSTP+ILHQP D DKKP  H  SN+ S S+SN
Sbjct: 72  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSN 131

Query: 61  PSHFSQFYPSFPFGLCLPQISSTGLLPFEPDFVEQDDSRMLWADSVKKKRKRKMNKHK 119
           PSHFSQFYPSFPFGLCLPQISSTGLLPFEPD VEQDDSR LWADSVKKKRKRKMNKHK
Sbjct: 132 PSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRKLWADSVKKKRKRKMNKHK 189

BLAST of Clc05G15330 vs. NCBI nr
Match: XP_011651574.1 (uncharacterized protein LOC101220058 [Cucumis sativus])

HSP 1 Score: 203.8 bits (517), Expect = 1.0e-48
Identity = 103/118 (87.29%), Postives = 106/118 (89.83%), Query Frame = 0

Query: 1   MASMLQKLIRKSPPPRLIAALGAQTSQNLSTPYILHQPHDSDKKPSGHSDSNLISVSSSN 60
           MASMLQ LIRKSPP RLIAALGAQTSQNLSTP+ILHQP D DKKP  H  SN+ S S+SN
Sbjct: 1   MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSN 60

Query: 61  PSHFSQFYPSFPFGLCLPQISSTGLLPFEPDFVEQDDSRMLWADSVKKKRKRKMNKHK 119
           PSHFSQFYPSFPFGLCLPQISSTGLLPFEPD VEQDDSR LWADSVKKKRKRKMNKHK
Sbjct: 61  PSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRKLWADSVKKKRKRKMNKHK 118

BLAST of Clc05G15330 vs. NCBI nr
Match: KAG7017804.1 (hypothetical protein SDJN02_19670, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 198.7 bits (504), Expect = 3.3e-47
Identity = 100/118 (84.75%), Postives = 104/118 (88.14%), Query Frame = 0

Query: 1   MASMLQKLIRKSPPPRLIAALGAQTSQNLSTPYILHQPHDSDKKPSGHSDSNLISVSSSN 60
           MASMLQKL+RKSPP RLIAALG QTSQN   PYILHQP D DKKP  H DSNL SVS+SN
Sbjct: 1   MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSN 60

Query: 61  PSHFSQFYPSFPFGLCLPQISSTGLLPFEPDFVEQDDSRMLWADSVKKKRKRKMNKHK 119
           PSHFS FYPSFPFG CLPQISS+G+LPFEPDFVEQDDSR LWADSVKKKRKRKMNKHK
Sbjct: 61  PSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRKLWADSVKKKRKRKMNKHK 118

BLAST of Clc05G15330 vs. NCBI nr
Match: XP_023526336.1 (uncharacterized protein LOC111789858 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 197.2 bits (500), Expect = 9.7e-47
Identity = 99/118 (83.90%), Postives = 104/118 (88.14%), Query Frame = 0

Query: 1   MASMLQKLIRKSPPPRLIAALGAQTSQNLSTPYILHQPHDSDKKPSGHSDSNLISVSSSN 60
           MASMLQKL+RKSPP RLIAALG QTSQN   PYILHQP D DKKP  H DSNL SVS+SN
Sbjct: 1   MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSN 60

Query: 61  PSHFSQFYPSFPFGLCLPQISSTGLLPFEPDFVEQDDSRMLWADSVKKKRKRKMNKHK 119
           PSHFS FYPSFPFG CLPQISS+G+LPFEPDFVEQD+SR LWADSVKKKRKRKMNKHK
Sbjct: 61  PSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDESRKLWADSVKKKRKRKMNKHK 118

BLAST of Clc05G15330 vs. ExPASy TrEMBL
Match: A0A5A7UNU9 (DUF1713 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00280 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.8e-49
Identity = 104/118 (88.14%), Postives = 107/118 (90.68%), Query Frame = 0

Query: 1   MASMLQKLIRKSPPPRLIAALGAQTSQNLSTPYILHQPHDSDKKPSGHSDSNLISVSSSN 60
           MASMLQKLIRKSPP RLIAALGAQTSQNLSTP+ILHQP D DKK   HS SNL S S+SN
Sbjct: 1   MASMLQKLIRKSPPSRLIAALGAQTSQNLSTPFILHQPLDFDKKSDAHSHSNLNSASTSN 60

Query: 61  PSHFSQFYPSFPFGLCLPQISSTGLLPFEPDFVEQDDSRMLWADSVKKKRKRKMNKHK 119
           PS FSQFYPSFPFGLCLPQISSTGLLPFEPD+VEQDDSR LWADSVKKKRKRKMNKHK
Sbjct: 61  PSQFSQFYPSFPFGLCLPQISSTGLLPFEPDYVEQDDSRKLWADSVKKKRKRKMNKHK 118

BLAST of Clc05G15330 vs. ExPASy TrEMBL
Match: A0A0A0LDP0 (DUF1713 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G592160 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 5.0e-49
Identity = 103/118 (87.29%), Postives = 106/118 (89.83%), Query Frame = 0

Query: 1   MASMLQKLIRKSPPPRLIAALGAQTSQNLSTPYILHQPHDSDKKPSGHSDSNLISVSSSN 60
           MASMLQ LIRKSPP RLIAALGAQTSQNLSTP+ILHQP D DKKP  H  SN+ S S+SN
Sbjct: 1   MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSN 60

Query: 61  PSHFSQFYPSFPFGLCLPQISSTGLLPFEPDFVEQDDSRMLWADSVKKKRKRKMNKHK 119
           PSHFSQFYPSFPFGLCLPQISSTGLLPFEPD VEQDDSR LWADSVKKKRKRKMNKHK
Sbjct: 61  PSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRKLWADSVKKKRKRKMNKHK 118

BLAST of Clc05G15330 vs. ExPASy TrEMBL
Match: A0A6J1F832 (uncharacterized protein LOC111441723 OS=Cucurbita moschata OX=3662 GN=LOC111441723 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 4.7e-47
Identity = 99/118 (83.90%), Postives = 104/118 (88.14%), Query Frame = 0

Query: 1   MASMLQKLIRKSPPPRLIAALGAQTSQNLSTPYILHQPHDSDKKPSGHSDSNLISVSSSN 60
           MASMLQKL+RKSPP RLIAALG QTSQN   PYILHQP D DKKP  H DSNL SVS+SN
Sbjct: 1   MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSN 60

Query: 61  PSHFSQFYPSFPFGLCLPQISSTGLLPFEPDFVEQDDSRMLWADSVKKKRKRKMNKHK 119
           PSHFS FYPSFPFG CLPQISS+G+LPFEP+FVEQDDSR LWADSVKKKRKRKMNKHK
Sbjct: 61  PSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRKLWADSVKKKRKRKMNKHK 118

BLAST of Clc05G15330 vs. ExPASy TrEMBL
Match: A0A6J1J7I5 (uncharacterized protein LOC111482461 OS=Cucurbita maxima OX=3661 GN=LOC111482461 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.9e-44
Identity = 96/118 (81.36%), Postives = 101/118 (85.59%), Query Frame = 0

Query: 1   MASMLQKLIRKSPPPRLIAALGAQTSQNLSTPYILHQPHDSDKKPSGHSDSNLISVSSSN 60
           MASMLQKL+RKS P RLIAALG QTSQN   PYILHQP D DKKP  H DSNL SVS+S+
Sbjct: 1   MASMLQKLVRKSSPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSD 60

Query: 61  PSHFSQFYPSFPFGLCLPQISSTGLLPFEPDFVEQDDSRMLWADSVKKKRKRKMNKHK 119
            SHF  FYPSFPFG CLPQISS+G+LPFEPDFVEQDDSR LWADSVKKKRKRKMNKHK
Sbjct: 61  LSHFPLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRKLWADSVKKKRKRKMNKHK 118

BLAST of Clc05G15330 vs. ExPASy TrEMBL
Match: A0A6J1EJL0 (uncharacterized protein LOC111435191 OS=Cucurbita moschata OX=3662 GN=LOC111435191 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.1e-43
Identity = 94/118 (79.66%), Postives = 102/118 (86.44%), Query Frame = 0

Query: 1   MASMLQKLIRKSPPPRLIAALGAQTSQNLSTPYILHQPHDSDKKPSGHSDSNLISVSSSN 60
           MAS+LQKLIRKSPP R IAAL +QTSQNLS PYILHQP D D+KP GH DSNL +VS+SN
Sbjct: 1   MASILQKLIRKSPPTRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSN 60

Query: 61  PSHFSQFYPSFPFGLCLPQISSTGLLPFEPDFVEQDDSRMLWADSVKKKRKRKMNKHK 119
           PS FS F+PSFPFGLCL QISSTG + FEPD+VE DDSR LWADSVKKKRKRKMNKHK
Sbjct: 61  PSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRKLWADSVKKKRKRKMNKHK 118

BLAST of Clc05G15330 vs. TAIR 10
Match: AT5G63150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1713, mitochondria (InterPro:IPR013177); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 2.1e-07
Identity = 35/81 (43.21%), Postives = 50/81 (61.73%), Query Frame = 0

Query: 43  KKPSGHSDSN-LISVSSSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDFVEQDDSR-- 102
           +KP   S +N LI++S +  +   +FYPSF  GLCL      GL   E   +E+++    
Sbjct: 46  EKPDPVSFTNPLITLSGNESNQPMRFYPSFSMGLCLNPKMIQGLDLAETASLEEEEEDTK 105

Query: 103 --MLWADSVKKKRKRKMNKHK 119
             +++ADSVKKKRK+KMNKHK
Sbjct: 106 EIVIYADSVKKKRKKKMNKHK 126

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0056277.17.9e-4988.14DUF1713 domain-containing protein [Cucumis melo var. makuwa] >TYK05222.1 DUF1713... [more]
KAE8650785.11.0e-4887.29hypothetical protein Csa_017463 [Cucumis sativus][more]
XP_011651574.11.0e-4887.29uncharacterized protein LOC101220058 [Cucumis sativus][more]
KAG7017804.13.3e-4784.75hypothetical protein SDJN02_19670, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023526336.19.7e-4783.90uncharacterized protein LOC111789858 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UNU93.8e-4988.14DUF1713 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A0A0LDP05.0e-4987.29DUF1713 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G592160 PE=... [more]
A0A6J1F8324.7e-4783.90uncharacterized protein LOC111441723 OS=Cucurbita moschata OX=3662 GN=LOC1114417... [more]
A0A6J1J7I52.9e-4481.36uncharacterized protein LOC111482461 OS=Cucurbita maxima OX=3661 GN=LOC111482461... [more]
A0A6J1EJL01.1e-4379.66uncharacterized protein LOC111435191 OS=Cucurbita moschata OX=3662 GN=LOC1114351... [more]
Match NameE-valueIdentityDescription
AT5G63150.12.1e-0743.21unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013177Mitochondrial mRNA-processing protein COX24, C-terminalPFAMPF08213DUF1713coord: 103..119
e-value: 1.1E-5
score: 25.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..55
NoneNo IPR availablePANTHERPTHR32035AURORA KINASE A-INTERACTING PROTEINcoord: 1..119
NoneNo IPR availablePANTHERPTHR32035:SF8SUBFAMILY NOT NAMEDcoord: 1..119

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc05G15330.2Clc05G15330.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006397 mRNA processing