Clc05G14163 (gene) Watermelon (cordophanus) v2

Overview
NameClc05G14163
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionNAD(P)H-quinone oxidoreductase subunit K, chloroplastic
LocationClcChr05: 13587568 .. 13592486 (-)
RNA-Seq ExpressionClc05G14163
SyntenyClc05G14163
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCGCCAGTTCGACGCTACCGTGACGCTTTTTCCCAAGAGCATCACTCCAGCTTAGCGCAGCAACACCAACGCGACGTTGTGGCACGGCGTCAATTGTAGGATTTTATGATGCACAGCGCTGCAAGTTCCCCTTACTTGATCGAACAACCCAAACTTTAGTTATTTCAACTACATAAAATGATCTTTCAAATTGGTCAAGACTCTCCACTTTATGGCCACTCTCTCTATGGTACCAATTATTGCTTCATTGAATTCGCTTCATTAGTAGGTTCACAATTCGACTTTGATCGTTATGGACTGGTACTAAGATCTAGTCTACCATCCTACAGCGCAGCGACACCACCTTTTGATGTCGGACAGCGCAGTGGCACCATTGACCAGTGCCGCAAAGTTCCTTTATAGCCTTACTTGTGTGTGTTGATGATGAAGGGATCGAATCCCCAGCAAAAGTGTTTAATCACCTTTTGCTTTGATTTTCTTTTAAATTAAAATTACAGAGAAAGAAATCTAGAATTGTAGAAACTAAATAGGCTATGAATTCATGGTGGTTAATAGAATTAAAGGAAGAAAAGCTAATTACCTTTGTTGAAACCTTTTCAACAAATCTTTTTCTCCAACAAGTTGAAGGTCTCCCTTCTTTGTGAAAACGTTTCCAAAAGGTCTTTCTCACTATATCTCTTGGGAAGGCACCAACTTGAGGGGGTCTTTCTTGAAAGAGATAGGGAATTGAGAGAGAGATCAAGAGAAAAATCATAGAGAATTTTTCTATTATTATGTGAGAGAGTAAAGAGAAAAGGAATAGCTTTTGGGAAAAAAAAACTATATGCCAAAATAACTCCCATTTGGGATTTAACGCATGACTCCCCACCTCCCTTGACTCTTAAATTAAGGGGAAATTAATTAATTAATTAATTATTAACAATTAATTTAATTAAATATCTCAAATTTAATTAAATAAAGATTTGAATCATATTCAAACGTATATTTCTCTCTTAACCTATAGTTTTAATATGAATCTCATTCATATTAATTTAATATTTAAATCACATTCAAATACATCAATTCTCCCATTTTATATAGTTATGTATCTACATAGATTACATCTTTGTTGGGTTTTATGTCCTAAAACTCGTACTTTGTAATTTTTGGAACTTATTCTCAATAAAGTTATTATCGAGATTTATTCAGTAAAGCTGTTATTGAATATATGAATTGCATTTATTAAATCCAATAAACTAAGAACTCCTGGTTATATACTGAATTCTTAGACTTTATGTGGTGACATAAAAATGGATCAAGTTTAGATAATAGCCAAACGGTCTATAGTATATGGATAAAGGTTGGGTACCTTATTCTAGGGAAACTATAGATGGGACCCACCTTGTATTTGATACAAACGATGTAATCCTAAATCGTTCCTGTGACAACATGTGAGTAGAGGTGTCCTATGCAATGAGTTTGAATAACACCAGACCATGAAATAATCACTTTTACTTTATTACACTATTTACTGTTAAAACTGATTATTTCAACCTGATGACCTAGGTTACTCGATCTTAATCCTGAGCTAACTATGAATTTCTATCTATTTGAGATTATCCTTTAATCTGCATAGGTGAGAGTGGCATGAGTTCTCCGACTCAATATGCCTCCCATTTTAGGGATAAGATCAAACAGATAGCTGGGGACATAATCTTGCAAGATAGAATTTACTCTTACCTATTTCTAGATTAGTAAATAAGTTGTTCCCTTAAGTACTGACTTTGGGACTTGAACAAGGTGCCCCACCCACTCATTGGCCTGAGAGGGACTAGGTTTGTTGGTTGGACCACAAACCATTGTTCATTAGAGGATTAGTGGGACTTTAGAAACGAGATGTAATTACAGGGGTAAAACAGTAATTTTGACCCAACTGTAATTACGAACAACTAGTGAAGAATTGACTTACTTATTATGGTTATATCAAGTGGATAGAAATATATCTACAGTGAGGAGAATGCAGCTACTGGGCATTAGTAGAGTGTCCCAATAATTAACGAATGTTAATTAACTAGGTTAAAGAGTTTAGCCGATTAATTTTGGATCGTTGGAGCTCATGATCTGTAGGTCCTTTAGGTCCCCTTATTAGCTCATGGACTAAACATTAGAACAGTATATTGAGTAAATTTGAAATGTTCGTATTCAGTTGAAGAGGAAAATTTATGGTTTGTTCGTTTAATTATGAAATAGACAAATTTGGAGACTTAGAAATATTTAAATGTGATTTAAATATTTTTAAGATAAATATAGGTTCACCGGATTGGATTTTGTCGGGAAAAGTGAAAAATAATTAATTTAATATTAGGGCTCTTTTCAAATATAGCAAAAGGAATCAAAATATTTACAAATATAACAAAATTTCACTATCTATTTGTGATAAACCGCGATAAACTACTATCTGTGTCATGATAGACACAGATAGTAGTCTATTACGATCTACCGTGGTCTATCGCAGATAAACTATGTATTTTGCTATTAGTTGTAAATATTTTTAGCAGTTTTGTCATTTAAGATAATTTTCCTTTAATATAATTAATTAATTATTATTTAAATTAATTATATATTAAATTAATTTTATTTAAAAATTAATTTTTGGAAATTAATTTTGAATTAAAAAAACAATTTATGAAATTGAATTTAAAAATCCAATTTGAGAAATTGGAAAAATCCACTATGCATGGTGAAGGAGGTGATGTTCTTCATGCAAGCTTCTTCCACCTCCAATTTGAGTATCTTATTCAACTGATTAGTTGTTTTCATGCATGCCAATCTAATTTTCATGCTTTCTTCTTTTAAATAGAAGAGAGGAATTGAAGAAAATGGTTAAACATTTTAGCTAATTTGTGCTGAAATTCTCTCCTACTCAAAAACTGAAAAACCAGTTTGTTGATCATCTTGTTGCTCCAAATTCTACTCAATTTGGACCCCAAAATTCGTTCTAAGGCTTTAGGATAACAAGAAAGACTCTTGTGGTAGTCCACGAAATGTTCATGATCAAAAATTCAAAGAAATTTGATTCAATTTTGAGCTACAGCAAGTAAGTGTTATTTCCATGTTTTTTGGTTTTAGAACAAGCATGTTTAATCTTCAAAATTGATGTAATTAGAGTGCTTTAAATCCTAATTCCTTCCGTTATTATGTTGCTAACTCCTTCAATTATATATTAATTGTACATGATAAAATAAATATATTCTTAATTCATTGTGAGCTAACAATGGACTTTATGGACCTACAAATTATAAGCTCAAATAATTTGAGATTAATTAATTTAACCTTCATTCATTAATTATTAGGGAAAACCATTATAGACCAAAAATTGCACTCTTATGAATTGTAGGACAAGCTATGTTCATGAATATAATCACTACATGTAAGTGAATCATTCACGAGTTGTTCGTAATTACCGCTAGTTCAAATGTCTATTTTTCTCCTTTAGTTACCTCTGTATCCTTAAGTACTACTAATCCTCTAATGAACAATTTGTTTATGGTTTAACCATAAATCAAGTCCCTCACGGGCCAATGAAAGGGTGGGCTCTATTTGTTCAAGTCCCAGAGTTAGCACTTAAAGGAACTACTCATAATATACTTACCATATATAGGAAAGAGTGAATTCCATATTGTAAAATTATGCTCCTACTAGCTCTCTATCCGATCAAGTCCCTAAAATGGCAGACTTATTGAGTTAGCATCTCGAGCCACTCTCACCCATGAAAATCAAAGGACAAGCCCTCACAGGGAAGAGTTTCACTGAGGATTAAGATCGAGTTACTTGTGATTATCTTGTGAAATATTAATCTTTTCAATTAATGGATTTACAAAGAGAGATTAATTATTTTGAGGTCTAGTCTTATAGAAAATCTTTATATAGGATACCCCACTCACATGTCTTCACATAAACAATTGGATCAAATCGTTTATAACATTTACGAAGTGGGTCGTATCCGTAGTGTCACCAGAATAAGACACCTAACATTATCCATACACTATAGACCCTTTAGGTTATTTACTTGAACATGATTCACTTATATATCAACTACATACTATTCATGTTTTCATAAAATAGCATTGAATTTTTTTTTATTGAATTAAATTATGCAACAATTAATAAAAAAAATAACAATGTATTTTTTTTTATTAATAATAAAAAATAGGTTTATTTACAAACCACGAGTTTAGGACATAACACACGAACATATGATATAATCATCACAAGGTCTTCAAACAAAGATATAGAAAAACTGATACATTCATCTTGATGCCATCTTAGATCCTTAAGATACTTTTTGGGTCTTGAGATTGCTTGTTCTAGTAAAAGCATATCTCTATCTCAAAGGAATTATACTTTACAACTCCTTGAAGATAATGGTCTTTTAGGTTGTAAACTAATTTCTTTGCCTCTTGATCCCAATCTTAAGCTGCAAATTGATGTAGGGACAGTGCGTAAAGCTGCAATTTGTTGCAAATCCCAGACAACCACATTTAGATGTTGGTTTTTGCTTGTTTAGGTACTTGAAAGCTACCCTTGCTCAAAGTATTTTTTTTGCAGTGTACAAGTTCTTTCAGTGTACAAGTTCTTTCTTGGTGATGCTCTTATTAGTTGAAAATCTAAGAAGCAGCTCTATAGAAGTCGAATACAGGACTCTAAAAACAACTACAAGTGAAATTATGTGGCTTCAGCAGTTGCTAAAGGATTTGCGTCTTAATGTTCTGTCTCCATCTTTGTTGTTTTGTGACAATGAAGTTGCTATTCACATTGCTACTAACCCCATTTTTCATGAGAGAACTAAATATATAGAGCTTGATTCTCATTTCGTTTGTGATCATGTCTCTCAAGGAACTTTTGCTTATCCGGTCTTAACTGCAGCTTACTGA

mRNA sequence

ATGGCAGCGCCAGTTCGACGCTACCGTGACGCTTTTTCCCAAGAGCATCACTCCAGCTTAGCGCAGCAACACCAACGCGACGTTGTGGCACGGCACTCTCCACTTTATGGCCACTCTCTCTATGGTACCAATTATTGCTTCATTGAATTCGCTTCATTAGTAGGTTCACAATTCGACTTTGATCGTTATGGACTGGTACTAAGATCTAGTCTACCATCCTACAGCGCAGCGACACCACCTTTTGATGTCGGACAGCGCAGTGGCACCATTGACCAGTGCCGCAAAGGACAGTGCGTAAAGCTGCAATTTGTTGCAAATCCCAGACAACCACATTTAGATGTTGGTTTTTGCTTGTTTAGGTACTTGAAAGCTACCCTTGCTCAAAGTATTTTTTTTGCAGTGTACAAGTTCTTTCAGTGTACAAGTTCTTTCTTGGTGATGCTCTTATTAGTTGAAAATCTAAGAAGCAGCTCTATAGAAGTCGAATACAGGACTCTAAAAACAACTACAAGTGAAATTATGTGGCTTCAGCAGTTGCTAAAGGATTTGCGTCTTAATGTTCTGTCTCCATCTTTGTTGTTTTGTGACAATGAAGTTGCTATTCACATTGCTACTAACCCCATTTTTCATGAGAGAACTAAATATATAGAGCTTGATTCTCATTTCGTTTGTGATCATGTCTCTCAAGGAACTTTTGCTTATCCGGTCTTAACTGCAGCTTACTGA

Coding sequence (CDS)

ATGGCAGCGCCAGTTCGACGCTACCGTGACGCTTTTTCCCAAGAGCATCACTCCAGCTTAGCGCAGCAACACCAACGCGACGTTGTGGCACGGCACTCTCCACTTTATGGCCACTCTCTCTATGGTACCAATTATTGCTTCATTGAATTCGCTTCATTAGTAGGTTCACAATTCGACTTTGATCGTTATGGACTGGTACTAAGATCTAGTCTACCATCCTACAGCGCAGCGACACCACCTTTTGATGTCGGACAGCGCAGTGGCACCATTGACCAGTGCCGCAAAGGACAGTGCGTAAAGCTGCAATTTGTTGCAAATCCCAGACAACCACATTTAGATGTTGGTTTTTGCTTGTTTAGGTACTTGAAAGCTACCCTTGCTCAAAGTATTTTTTTTGCAGTGTACAAGTTCTTTCAGTGTACAAGTTCTTTCTTGGTGATGCTCTTATTAGTTGAAAATCTAAGAAGCAGCTCTATAGAAGTCGAATACAGGACTCTAAAAACAACTACAAGTGAAATTATGTGGCTTCAGCAGTTGCTAAAGGATTTGCGTCTTAATGTTCTGTCTCCATCTTTGTTGTTTTGTGACAATGAAGTTGCTATTCACATTGCTACTAACCCCATTTTTCATGAGAGAACTAAATATATAGAGCTTGATTCTCATTTCGTTTGTGATCATGTCTCTCAAGGAACTTTTGCTTATCCGGTCTTAACTGCAGCTTACTGA

Protein sequence

MAAPVRRYRDAFSQEHHSSLAQQHQRDVVARHSPLYGHSLYGTNYCFIEFASLVGSQFDFDRYGLVLRSSLPSYSAATPPFDVGQRSGTIDQCRKGQCVKLQFVANPRQPHLDVGFCLFRYLKATLAQSIFFAVYKFFQCTSSFLVMLLLVENLRSSSIEVEYRTLKTTTSEIMWLQQLLKDLRLNVLSPSLLFCDNEVAIHIATNPIFHERTKYIELDSHFVCDHVSQGTFAYPVLTAAY
Homology
BLAST of Clc05G14163 vs. NCBI nr
Match: XP_022867558.1 (uncharacterized protein LOC111387247 [Olea europaea var. sylvestris])

HSP 1 Score: 119.8 bits (299), Expect = 3.3e-23
Identity = 67/156 (42.95%), Postives = 89/156 (57.05%), Query Frame = 0

Query: 102 QFVANPRQPHLDVGFCLFRYLKATLAQSIFFAVYKFFQ-----------------CTSSF 161
           QFV++PRQPHLD    L RYLKA+  Q +F++    FQ                   +SF
Sbjct: 134 QFVSSPRQPHLDAAHHLLRYLKASPGQGLFYSAASDFQLRAFANADWGSYLDTRKSVTSF 193

Query: 162 LVML---------LLVENLRSSSIEVEYRTLKTTTSEIMWLQQLLKDLRLNVLSPSLLFC 221
            + +              +  SS E EYR L +TTSE++W  Q L D +++   P+ LFC
Sbjct: 194 YIFIGDSMISWKAKKQTTISRSSAEAEYRALASTTSELIWPYQFLNDFQIHQSGPAALFC 253

Query: 222 DNEVAIHIATNPIFHERTKYIELDSHFVCDHVSQGT 232
           DN+ AIHIATNPIFHERTK+IE+D HFV D V+ G+
Sbjct: 254 DNQAAIHIATNPIFHERTKHIEIDCHFVRDKVTDGS 289

BLAST of Clc05G14163 vs. NCBI nr
Match: XP_022887164.1 (uncharacterized protein LOC111403045 [Olea europaea var. sylvestris])

HSP 1 Score: 114.0 bits (284), Expect = 1.8e-21
Identity = 67/156 (42.95%), Postives = 89/156 (57.05%), Query Frame = 0

Query: 102 QFVANPRQPHLDVGFCLFRYLKATLAQSIFFAVYKFFQ-----------CTSS------F 161
           QFV+ PRQ HLDV + L RYLKA   Q + F+     Q           C  S      F
Sbjct: 195 QFVSQPRQLHLDVVYHLLRYLKAAPGQGLLFSASSSLQLRAFADADWGACLDSRKSVTGF 254

Query: 162 LVML---------LLVENLRSSSIEVEYRTLKTTTSEIMWLQQLLKDLRLNVLSPSLLFC 221
            V L            + L  SS E EYR L +T SEI W+ QLL+D +++  + +L+FC
Sbjct: 255 CVFLGDSLISWKAKKQQTLSRSSAEAEYRALASTASEIAWIHQLLRDFQISSPTSALIFC 314

Query: 222 DNEVAIHIATNPIFHERTKYIELDSHFVCDHVSQGT 232
           DN+ AIHIA NPIFHERTK+IE+D H++ D V++G+
Sbjct: 315 DNQAAIHIANNPIFHERTKHIEIDCHYIRDKVTEGS 350

BLAST of Clc05G14163 vs. NCBI nr
Match: XP_022888908.1 (uncharacterized protein LOC111404314 [Olea europaea var. sylvestris])

HSP 1 Score: 113.6 bits (283), Expect = 2.3e-21
Identity = 62/155 (40.00%), Postives = 88/155 (56.77%), Query Frame = 0

Query: 102 QFVANPRQPHLDVGFCLFRYLKATLAQSIFFAVYKFFQ-----------------CTSSF 161
           QFVA PR+PHL+V   L +YLKA+  Q + F+     Q                   + +
Sbjct: 196 QFVAQPRKPHLEVAHHLLQYLKASPGQGLLFSANSSLQIRAFSDADWGACLDTRKSVTGY 255

Query: 162 LVML---------LLVENLRSSSIEVEYRTLKTTTSEIMWLQQLLKDLRLNVLSPSLLFC 221
            V L              +   S E EYR L +TTSE++W+ QLL+D  ++  +P+L+FC
Sbjct: 256 CVFLGDSQVSWKAKKQTTISRFSAEAEYRALASTTSELIWISQLLQDFHISSSAPALIFC 315

Query: 222 DNEVAIHIATNPIFHERTKYIELDSHFVCDHVSQG 231
           DN+ AIHIA+NPIFHERTK+IE+D HF+ D ++ G
Sbjct: 316 DNQAAIHIASNPIFHERTKHIEIDCHFIRDRINDG 350

BLAST of Clc05G14163 vs. NCBI nr
Match: XP_022899321.1 (uncharacterized protein LOC111412620 [Olea europaea var. sylvestris])

HSP 1 Score: 113.2 bits (282), Expect = 3.1e-21
Identity = 64/156 (41.03%), Postives = 88/156 (56.41%), Query Frame = 0

Query: 102 QFVANPRQPHLDVGFCLFRYLKATLAQSIFFAVYKFFQ-----------------CTSSF 161
           QFV+ PRQPHLD    L +Y+KA+  Q I F+     Q                   + F
Sbjct: 196 QFVSQPRQPHLDAAHHLLQYIKASPGQGILFSAQSSLQLRAFADADWGSCLDTRKSVAGF 255

Query: 162 LVML--LLVE-------NLRSSSIEVEYRTLKTTTSEIMWLQQLLKDLRLNVLSPSLLFC 221
            V L   L+         +  SS E EYR L +T SE+ WL QLL D + +   P+++FC
Sbjct: 256 CVFLGDSLISWKAKKQTTVSRSSAEAEYRALASTASELTWLTQLLGDFQTSTKDPTVIFC 315

Query: 222 DNEVAIHIATNPIFHERTKYIELDSHFVCDHVSQGT 232
           DN+VA+H+A+NPIFHERTK+IE+D HF+ D V+ G+
Sbjct: 316 DNQVAVHMASNPIFHERTKHIEIDCHFIRDKVADGS 351

BLAST of Clc05G14163 vs. NCBI nr
Match: XP_024026696.1 (uncharacterized protein LOC112093108 [Morus notabilis])

HSP 1 Score: 112.8 bits (281), Expect = 4.0e-21
Identity = 68/155 (43.87%), Postives = 91/155 (58.71%), Query Frame = 0

Query: 102 QFVANPRQPHLDVGFCLFRYLKATLAQSIFFAVYKFFQ-----------CTSS------F 161
           QF+A PR PHL     L RY+KA+  Q +F++     Q           C  S      F
Sbjct: 196 QFLAKPRVPHLQAVHHLLRYIKASPGQGLFYSAASPIQLKAFSDSDWGSCPDSQKSVTGF 255

Query: 162 LVML--LLVE-------NLRSSSIEVEYRTLKTTTSEIMWLQQLLKDLRLNVLSPSLLFC 221
            V +   LV         +  SS E +YR L +T SE++WL+QLL D R ++ SP++LFC
Sbjct: 256 CVFVGDSLVSWKSKKQTTVSRSSAEAKYRALASTVSELVWLRQLLSDFRFDLSSPTMLFC 315

Query: 222 DNEVAIHIATNPIFHERTKYIELDSHFVCDHVSQG 231
           DN+ AIHIA+NPIFHERTK+IE+D HFV D V++G
Sbjct: 316 DNQAAIHIASNPIFHERTKHIEVDCHFVRDMVTKG 350

BLAST of Clc05G14163 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.9e-12
Identity = 31/74 (41.89%), Postives = 48/74 (64.86%), Query Frame = 0

Query: 157  SSIEVEYRTLKTTTSEIMWLQQLLKDLRLNVLSPSLLFCDNEVAIHIATNPIFHERTKYI 216
            SS E EYR++  T+SE+ W+  LL +L + +  P +++CDN  A ++  NP+FH R K+I
Sbjct: 1335 SSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHI 1394

Query: 217  ELDSHFVCDHVSQG 231
             LD HF+ + V  G
Sbjct: 1395 ALDYHFIRNQVQSG 1408

BLAST of Clc05G14163 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-11
Identity = 30/74 (40.54%), Postives = 48/74 (64.86%), Query Frame = 0

Query: 157  SSIEVEYRTLKTTTSEIMWLQQLLKDLRLNVLSPSLLFCDNEVAIHIATNPIFHERTKYI 216
            SS E EYR++  T+SE+ W+  LL +L + +  P +++CDN  A ++  NP+FH R K+I
Sbjct: 1352 SSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHI 1411

Query: 217  ELDSHFVCDHVSQG 231
             +D HF+ + V  G
Sbjct: 1412 AIDYHFIRNQVQSG 1425

BLAST of Clc05G14163 vs. ExPASy Swiss-Prot
Match: A9LYA5 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Acorus americanus OX=263995 GN=ndhK PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.6e-07
Identity = 26/31 (83.87%), Postives = 29/31 (93.55%), Query Frame = 0

Query: 40 LYGTNYCFIEFASLVGSQFDFDRYGLVLRSS 71
          LYGT+ CFIEFASL+GS+FDFDRYGLV RSS
Sbjct: 38 LYGTSCCFIEFASLIGSRFDFDRYGLVPRSS 68

BLAST of Clc05G14163 vs. ExPASy Swiss-Prot
Match: Q3V530 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Acorus calamus OX=4465 GN=ndhK PE=3 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 2.6e-07
Identity = 26/31 (83.87%), Postives = 29/31 (93.55%), Query Frame = 0

Query: 40 LYGTNYCFIEFASLVGSQFDFDRYGLVLRSS 71
          LYGT+ CFIEFASL+GS+FDFDRYGLV RSS
Sbjct: 38 LYGTSCCFIEFASLIGSRFDFDRYGLVPRSS 68

BLAST of Clc05G14163 vs. ExPASy Swiss-Prot
Match: Q85FL6 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Adiantum capillus-veneris OX=13818 GN=ndhK PE=2 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 2.6e-07
Identity = 26/31 (83.87%), Postives = 29/31 (93.55%), Query Frame = 0

Query: 40 LYGTNYCFIEFASLVGSQFDFDRYGLVLRSS 71
          LYGT+ CFIEFASL+GS+FDFDRYGLV RSS
Sbjct: 62 LYGTSCCFIEFASLIGSRFDFDRYGLVPRSS 92

BLAST of Clc05G14163 vs. ExPASy TrEMBL
Match: A0A438IT12 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_3215 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 3.3e-21
Identity = 63/129 (48.84%), Postives = 78/129 (60.47%), Query Frame = 0

Query: 102 QFVANPRQPHLDVGFCLFRYLKATLAQSIFFAVYKFFQCTSSFLVMLLLVENLRSSSIEV 161
           QF+A PR PHL     L R LK T         +  F   S           +  SS E 
Sbjct: 511 QFLAQPRLPHLQAVHHLLRCLKFTSDTRKSITGFCNFIGDSLVSWKAKKQTTISQSSTEA 570

Query: 162 EYRTLKTTTSEIMWLQQLLKDLRLNVLSPSLLFCDNEVAIHIATNPIFHERTKYIELDSH 221
           EYR L +TTSE++WL QLLKD ++ + SP+LLFCDN+VAIH+A+NP FHERTK+IE+D H
Sbjct: 571 EYRALASTTSELVWLHQLLKDFQVPISSPALLFCDNQVAIHLASNPFFHERTKHIEIDCH 630

Query: 222 FVCDHVSQG 231
           FV D V  G
Sbjct: 631 FVHDKVVDG 639

BLAST of Clc05G14163 vs. ExPASy TrEMBL
Match: A0A2P5FNK4 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_049120 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 3.3e-21
Identity = 71/156 (45.51%), Postives = 86/156 (55.13%), Query Frame = 0

Query: 102 QFVANPRQPHLDVGFCLFRYLKATLAQSIFFAVYKFFQ-----------------CTSSF 161
           QF++ PR PHL     L RYLK    Q +FF+     Q                   + F
Sbjct: 47  QFLSRPRLPHLKAAHHLLRYLKHRPGQGLFFSASSSLQVKAFSDADWGSCPDTRKSVTGF 106

Query: 162 LVML--LLV-------ENLRSSSIEVEYRTLKTTTSEIMWLQQLLKDLRLNVLSPSLLFC 221
            + L   LV         +  SS E EYR L  TTSEI+ LQ LL D +L V SP+LLFC
Sbjct: 107 CIFLGDSLVSWKAKKQSTISRSSAEAEYRALAATTSEILCLQNLLHDFQLVVSSPALLFC 166

Query: 222 DNEVAIHIATNPIFHERTKYIELDSHFVCDHVSQGT 232
           DN+ AI+IA+NP FHERTK+IELD HFV D VSQG+
Sbjct: 167 DNQAAIYIASNPTFHERTKHIELDCHFVRDKVSQGS 202

BLAST of Clc05G14163 vs. ExPASy TrEMBL
Match: A0A803P8T3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.8e-20
Identity = 67/156 (42.95%), Postives = 85/156 (54.49%), Query Frame = 0

Query: 102  QFVANPRQPHLDVGFCLFRYLKATLAQSIFFAVYKFF-----------------QCTSSF 161
            QF+A+PR PH+     L RYLK +  Q I ++                      + T+ F
Sbjct: 1613 QFMASPRTPHVQALQHLIRYLKGSPGQGILYSATSSLHLRGFSDSDWASCPITRRSTTGF 1672

Query: 162  LVML--LLVE-------NLRSSSIEVEYRTLKTTTSEIMWLQQLLKDLRLNVLSPSLLFC 221
             + L   LV         +  SS E EYR L  TTSEI WLQ LLKDL +   +P+ ++C
Sbjct: 1673 CIFLGDCLVSWKTKKQITISRSSAEAEYRALAATTSEITWLQYLLKDLHIPQPNPAFIYC 1732

Query: 222  DNEVAIHIATNPIFHERTKYIELDSHFVCDHVSQGT 232
            DNE AIHIA NP FHERTK+IELD HFV D ++Q T
Sbjct: 1733 DNESAIHIANNPKFHERTKHIELDCHFVRDKINQST 1768

BLAST of Clc05G14163 vs. ExPASy TrEMBL
Match: A0A1R3H5P4 (Integrase catalytic domain-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_21443 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.8e-20
Identity = 63/152 (41.45%), Postives = 84/152 (55.26%), Query Frame = 0

Query: 102  QFVANPRQPHLDVGFCLFRYLKATLAQSIFFAVYK-----------FFQC------TSSF 161
            QF+ +PRQPHLD    + RYLK+   Q IFF+              +  C      T+ +
Sbjct: 1049 QFMNDPRQPHLDAALRVLRYLKSCPGQGIFFSSSSSPHLTGFSDSDWASCPQTRRSTTGY 1108

Query: 162  LVML---------LLVENLRSSSIEVEYRTLKTTTSEIMWLQQLLKDLRLNVLSPSLLFC 221
            + ML              +  SS E EYR +  T SE++WL+ LL+ L +    P  LFC
Sbjct: 1109 ITMLGSSPISWKTKKQTTVSRSSAEAEYRAMAATVSELLWLRSLLQTLGIPHQQPMALFC 1168

Query: 222  DNEVAIHIATNPIFHERTKYIELDSHFVCDHV 228
            DN+VAIHIATNP+FHERTK+IELD HF+  H+
Sbjct: 1169 DNQVAIHIATNPVFHERTKHIELDCHFIRSHI 1200

BLAST of Clc05G14163 vs. ExPASy TrEMBL
Match: A0A2P6S8W7 (Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0320771 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 8.1e-20
Identity = 64/155 (41.29%), Postives = 84/155 (54.19%), Query Frame = 0

Query: 102  QFVANPRQPHLDVGFCLFRYLKATLAQSIF-----------FAVYKFFQC------TSSF 161
            QF+  PRQPHLD    + RYLK T  Q IF           +    + +C      T+ +
Sbjct: 1079 QFMDKPRQPHLDAAHKVLRYLKQTPGQGIFLPSKGPLELSAYCDADWARCKDTRRSTTGY 1138

Query: 162  LVML---------LLVENLRSSSIEVEYRTLKTTTSEIMWLQQLLKDLRLNVLSPSLLFC 221
             + L              +  SS E EYR++ TT  EI WLQ +LKDL +  L P  LFC
Sbjct: 1139 CIFLGHAPISWKTKKQRTVSRSSAEAEYRSMATTCCEITWLQYILKDLNIQHLQPVKLFC 1198

Query: 222  DNEVAIHIATNPIFHERTKYIELDSHFVCDHVSQG 231
            DN+ AIHIA+NP+FHERTK+IE+D H V + V +G
Sbjct: 1199 DNKAAIHIASNPVFHERTKHIEIDCHVVREKVQRG 1233

BLAST of Clc05G14163 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 89.0 bits (219), Expect = 5.8e-18
Identity = 58/160 (36.25%), Postives = 76/160 (47.50%), Query Frame = 0

Query: 102 QFVANPRQPHLDVGFCLFRYLKATLAQSIFFAV--------------------------Y 161
           QF   PR  H      +  Y+K T+ Q +F++                           Y
Sbjct: 404 QFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGY 463

Query: 162 KFFQCTSSFLVMLLLVENLRSSSIEVEYRTLKTTTSEIMWLQQLLKDLRLNVLSPSLLFC 221
             F  TS         + +  SS E EYR L   T E+MWL Q  ++L+L +  P+LLFC
Sbjct: 464 CMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFC 523

Query: 222 DNEVAIHIATNPIFHERTKYIELDSHFVCDH-VSQGTFAY 235
           DN  AIHIATN +FHERTK+IE D H V +  V Q T +Y
Sbjct: 524 DNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSY 563

BLAST of Clc05G14163 vs. TAIR 10
Match: ATCG00430.1 (photosystem II reaction center protein G )

HSP 1 Score: 57.4 bits (137), Expect = 1.9e-08
Identity = 26/31 (83.87%), Postives = 29/31 (93.55%), Query Frame = 0

Query: 40 LYGTNYCFIEFASLVGSQFDFDRYGLVLRSS 71
          LYGT+ CFIEFASL+GS+FDFDRYGLV RSS
Sbjct: 38 LYGTSCCFIEFASLIGSRFDFDRYGLVPRSS 68

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022867558.13.3e-2342.95uncharacterized protein LOC111387247 [Olea europaea var. sylvestris][more]
XP_022887164.11.8e-2142.95uncharacterized protein LOC111403045 [Olea europaea var. sylvestris][more]
XP_022888908.12.3e-2140.00uncharacterized protein LOC111404314 [Olea europaea var. sylvestris][more]
XP_022899321.13.1e-2141.03uncharacterized protein LOC111412620 [Olea europaea var. sylvestris][more]
XP_024026696.14.0e-2143.87uncharacterized protein LOC112093108 [Morus notabilis][more]
Match NameE-valueIdentityDescription
Q9ZT947.9e-1241.89Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW21.3e-1140.54Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
A9LYA52.6e-0783.87NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Acorus americanus OX=... [more]
Q3V5302.6e-0783.87NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Acorus calamus OX=446... [more]
Q85FL62.6e-0783.87NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Adiantum capillus-ven... [more]
Match NameE-valueIdentityDescription
A0A438IT123.3e-2148.84Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976... [more]
A0A2P5FNK43.3e-2145.51Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_049120 PE=4 SV... [more]
A0A803P8T32.8e-2042.95Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A1R3H5P44.8e-2041.45Integrase catalytic domain-containing protein OS=Corchorus capsularis OX=210143 ... [more]
A0A2P6S8W78.1e-2041.29Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1... [more]
Match NameE-valueIdentityDescription
AT4G23160.15.8e-1836.25cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATCG00430.11.9e-0883.87photosystem II reaction center protein G [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11783:SF268SUBFAMILY NOT NAMEDcoord: 168..229
NoneNo IPR availablePANTHERPTHR11783SULFOTRANSFERASE SULTcoord: 168..229
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 157..232
e-value: 5.75454E-32
score: 112.176

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc05G14163.1Clc05G14163.1mRNA