Clc05G13690 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGGCAGATTTGAAGCCACTTTAGAAGCTTGAAAATGGCTCAGATTGCTAAGATCTCAGAGCAAGTCCAGCTCAAGTCTTCTGGTCACAAGTTCTATGAGTTTTTCAAGAACAAAATGGACTATGTCTTTGTTCAAATGTTCCCTGAAATTTACCAAAGCTGTAAGGTTGTCCAAGGAAATGGTTTTTCTCATGGCAATATCATCCACTTGAAATATAACGCAGGTGAGATTTGTATCAACTGCTCTTTCTAACTTTTTCTATTTTGGTTCAAACAGATGAAAATGTTTTTATATTTTATATTTTCTACTCAATGTTTCAGATAACAATTTCCTTTGATTGCACTGCATCAAAATTGATTATATTTAATTATAAAATGAAAAGAATGTGTGACGACTTAAGCAATTAGTATGTCAAATCGGTAGTGTTGTCAATCAATTCAACATCACACCAACAACACAAAATAAAGATGAGATACAGAGATTGGTAACCCAGTTCGGTGTTACACATCTACGCCTGGGGGGCTACTTGCTCGAGAAAGATAATTCACTACAACAAGAAACTTATCTGTAAAACAATCACTTCTACAGTAATTCCCATTACACTTAACTTGGTGATCACCTAAGCTCCTCGTAGATGAGAGACTTCCTCTTCTAGAATCAGTTATCTTTCTCAAATCATAGTGAACTCCCTTCACCTGATGTTGTGAACTTAAGATAAGTGAGAACTCCCTTCTCACGGAATGAGATTCAAGGCTTCCCTTGACATAAATGGTATTTCTTTTGAGACTGAGATATTAACTTCTATGCTTTCACAACTCATCACGATTACACAGCGGAAAAATGTAAAACACACAAGCTCTTATCTTTGCGATGAGGATGGCTGAAATACACACAAGCTTTTTGTATATAACCAAAGGCGACAACCCTAGAAAGGAACCCCTCATGCCTTTTAAACCTGCTGAACAAATAAGGATAATAGACTAGGTGAATCCAAGAAGGAAATAAAATCTGTCTGAAAAAATCTCTAGACAGACGCCCGATAAGGAAAGAGAAATATTCCCTAATAGCACCCAACAGTAAACTTGGATGTTAAGACAATTCAAGGACAGCCAATACAACATCCTTAGAATAAAATACGAGAGCCAACCACACAACTCTCCAACAATGAATATATTTTTTTAACTATATATTTAAAATTATTTTCAATTAATCACTTAAAAGTCATTTTAGATAATTTATTTCTCAAGAGTGTCTTTAAAAACAATGCTTTTAAATTAGGGAAATTGTTTTAGACGGCAAAATTGTTGAAATATTTACAAATATAGCAAAATTTTACATTCTATTTGTGATAGACTTAGATAGACATCTATCAGTGTCTATCGTTAAAGTGATAGATATCTATCTGGATTTAATCGCAGTCTATCACAAATAGAAAATAAAATTTTAATATATTTATAATTATTTTCAACAGTTTTGCCATATTTGAAAATATTCCTTTAAATTAATAAAAAAAATGTTAAAATTCTTTTATCTATTAAGATTTTGGTAAAAGGAAAAAATATTCTTGATTACATCTAAAATCATTTCAAAAGCTATACTAAACCCACTCCAAATTATTAATCTTTTCGAGATGTGCTCATAAGAAAAATTAAGAGTCGCATATATAATCTGAAAATAGAAATTTAAAAATAAAATGATTCAAATAAAATATAATCGTAATTCATATTTTTACATAGGTTTTGGCTGCAAATTGGTTCCGAATTTAGATTCTAATGTAAACACTTATTTTAAATGTGATTATACTATATTTATAAATCATAAAACTAGTTTATTACCTTCTAAAATTAAATTGAAATAAACTATTATTAATTAATTTATGAACATCTTTTATGTAATTTTTGGATAATTATTATTTGATAATATTATATAATTTTATAATACATTACATAATACATATTTTAATTTTTTAAAAAATGAATTGAGTTTACAACATGACATATTATATTTCTAAACATTTTAAAACTTTATTTAATATAATTCTACATTCTAAAATTTAAAATTCAAAATCTAAATACCATAAAACCATAAAAATATTGGTTTTAGAATTTGTATTGTTAGGATCATACAATCCAAAAACGGTTTTTAAAAACAAAATCCAGATTGTCTGGCAAACACATATTTGTTAAACTCAATATATCTAAAAACATAAAACACAATCGGAATTGTCAACCAAACAAACCTTAAATCTTTAAAAATGTATTTATTTTTTATTTCAGAAGTATTCCAAAGACACTATTAATAAGAAACAAATAACTAAAAGATTCTAGGTTTATTGCACAACCTCCCCAACATCACATGCCTTCACTAGTTATGCTATGCTTAATTGATATTCGTGTGTTGGGTTTTATATGTCAATCGTATATACACCATTATAATTGAATTTCAAACCAAGTTCTTAGGATTCTTTTTTTTTTCTTTTTGGTGGAAATTACATAGGAAAGCCAGAAGAGGTAAAAGAGAGGCTAGCTATTGATGATGCTACCAAATCAATAACCTTTGAGTGCATTGAAGGAGATCCATTAAGAGATTTTGAAGTGATCAAATTGAAAATTCAAGTTTTTGACAATGGTAGCAATGGCAGTTCAGTTAATTGGTCCATAGAATTTGTGAAGGCAAATGAAGATGTCGCTACACCACATAACTATCTTCTATGTGTAACTAAAGTTAGCAAAGGCCTTGATGATTACCTTTGCAACAATTGAACTAAAAAACATCCAACTTGGCTTGTCTATTGAAATATGATCTAAATAAAGTATCTCAATAATCTCTATAATTGTTGTTATCATATATGTACTTTGAAGCTTAATTGGAAGAAATGATAATGGTGATGGTGCTATATTCTACTTCGGGTGTGTTTGGAATATACTTTCAAGAGTTTAATTTAAAAAATAAGTTATTCTGGAAAAAAATTAGAGTATTTGGAAACAGCTAAAAATGAATTTTGAAGGGTATTTTAAACAATTTTAATCAAAAGAGTTTAAATAAAAATGAATTTTTTTTAAAACACATTTTTTCTCGAGTCAATCCAAACGTGTCCTTCTTTTTCTTTGTTAGGAATTTCTTTAATTTATTGATATAATAATATGTGATCTAGAAAATTAGGTACATCATGATGTGTCACCTAAAAGAAGAAAAATATATAATTTAGTTTTTCCTAGTGTGTATATATATAATATTGGTTAAAATATTATTTTGATATTTGTACTTTGAAATTTGTTCAATTTTAGTCTATATAATTTAAAATGTCCAATTTTAGATTTTATACTTTCAAGATGTTCTTAAATTTAG TTGGCAGATTTGAAGCCACTTTAGAAGCTTGAAAATGGCTCAGATTGCTAAGATCTCAGAGCAAGTCCAGCTCAAGTCTTCTGGTCACAAGTTCTATGAGTTTTTCAAGAACAAAATGGACTATGTCTTTGTTCAAATGTTCCCTGAAATTTACCAAAGCTGTAAGGTTGTCCAAGGAAATGGTTTTTCTCATGGCAATATCATCCACTTGAAATATAACGCAGGAAAGCCAGAAGAGGTAAAAGAGAGGCTAGCTATTGATGATGCTACCAAATCAATAACCTTTGAGTGCATTGAAGGAGATCCATTAAGAGATTTTGAAGTGATCAAATTGAAAATTCAAGTTTTTGACAATGGTAGCAATGGCAGTTCAGTTAATTGGTCCATAGAATTTGTGAAGGCAAATGAAGATGTCGCTACACCACATAACTATCTTCTATGTGTAACTAAAGTTAGCAAAGGCCTTGATGATTACCTTTGCAACAATTGAACTAAAAAACATCCAACTTGGCTTGTCTATTGAAATATGATCTAAATAAAGTATCTCAATAATCTCTATAATTGTTGTTATCATATATGTACTTTGAAGCTTAATTGGAAGAAATGATAATGGTGATGGTGCTATATTCTACTTCGGGTGTGTTTGGAATATACTTTCAAGAGTTTAATTTAAAAAATAAGTTATTCTGGAAAAAAATTAGAGTATTTGGAAACAGCTAAAAATGAATTTTGAAGGGTATTTTAAACAATTTTAATCAAAAGAGTTTAAATAAAAATGAATTTTTTTTAAAACACATTTTTTCTCGAGTCAATCCAAACGTGTCCTTCTTTTTCTTTGTTAGGAATTTCTTTAATTTATTGATATAATAATATGTGATCTAGAAAATTAGGTACATCATGATGTGTCACCTAAAAGAAGAAAAATATATAATTTAGTTTTTCCTAGTGTGTATATATATAATATTGGTTAAAATATTATTTTGATATTTGTACTTTGAAATTTGTTCAATTTTAGTCTATATAATTTAAAATGTCCAATTTTAGATTTTATACTTTCAAGATGTTCTTAAATTTAG ATGGCTCAGATTGCTAAGATCTCAGAGCAAGTCCAGCTCAAGTCTTCTGGTCACAAGTTCTATGAGTTTTTCAAGAACAAAATGGACTATGTCTTTGTTCAAATGTTCCCTGAAATTTACCAAAGCTGTAAGGTTGTCCAAGGAAATGGTTTTTCTCATGGCAATATCATCCACTTGAAATATAACGCAGGAAAGCCAGAAGAGGTAAAAGAGAGGCTAGCTATTGATGATGCTACCAAATCAATAACCTTTGAGTGCATTGAAGGAGATCCATTAAGAGATTTTGAAGTGATCAAATTGAAAATTCAAGTTTTTGACAATGGTAGCAATGGCAGTTCAGTTAATTGGTCCATAGAATTTGTGAAGGCAAATGAAGATGTCGCTACACCACATAACTATCTTCTATGTGTAACTAAAGTTAGCAAAGGCCTTGATGATTACCTTTGCAACAATTGA MAQIAKISEQVQLKSSGHKFYEFFKNKMDYVFVQMFPEIYQSCKVVQGNGFSHGNIIHLKYNAGKPEEVKERLAIDDATKSITFECIEGDPLRDFEVIKLKIQVFDNGSNGSSVNWSIEFVKANEDVATPHNYLLCVTKVSKGLDDYLCNN Homology
BLAST of Clc05G13690 vs. NCBI nr
Match: XP_038893753.1 (kirola-like [Benincasa hispida]) HSP 1 Score: 283.1 bits (723), Expect = 1.4e-72 Identity = 132/151 (87.42%), Postives = 146/151 (96.69%), Query Frame = 0
BLAST of Clc05G13690 vs. NCBI nr
Match: XP_004149786.1 (kirola [Cucumis sativus] >KGN57826.1 hypothetical protein Csa_010178 [Cucumis sativus]) HSP 1 Score: 274.6 bits (701), Expect = 5.0e-70 Identity = 127/151 (84.11%), Postives = 143/151 (94.70%), Query Frame = 0
BLAST of Clc05G13690 vs. NCBI nr
Match: XP_008457055.1 (PREDICTED: major latex protein 149-like [Cucumis melo] >KAA0056082.1 major latex protein 149-like protein [Cucumis melo var. makuwa] >TYK01535.1 major latex protein 149-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 273.9 bits (699), Expect = 8.5e-70 Identity = 125/151 (82.78%), Postives = 143/151 (94.70%), Query Frame = 0
BLAST of Clc05G13690 vs. NCBI nr
Match: KAG6581206.1 (Major latex protein 146, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 247.3 bits (630), Expect = 8.5e-62 Identity = 116/151 (76.82%), Postives = 136/151 (90.07%), Query Frame = 0
BLAST of Clc05G13690 vs. NCBI nr
Match: XP_023528288.1 (kirola-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 246.1 bits (627), Expect = 1.9e-61 Identity = 116/151 (76.82%), Postives = 133/151 (88.08%), Query Frame = 0
BLAST of Clc05G13690 vs. ExPASy Swiss-Prot
Match: Q9SSK7 (MLP-like protein 34 OS=Arabidopsis thaliana OX=3702 GN=MLP34 PE=2 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 9.6e-16 Identity = 50/145 (34.48%), Postives = 84/145 (57.93%), Query Frame = 0
BLAST of Clc05G13690 vs. ExPASy Swiss-Prot
Match: P85524 (Kirola OS=Actinidia deliciosa OX=3627 PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 8.1e-15 Identity = 46/144 (31.94%), Postives = 84/144 (58.33%), Query Frame = 0
BLAST of Clc05G13690 vs. ExPASy Swiss-Prot
Match: Q06394 (Major latex protein 146 OS=Papaver somniferum OX=3469 GN=MLP146 PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 5.3e-14 Identity = 42/148 (28.38%), Postives = 76/148 (51.35%), Query Frame = 0
BLAST of Clc05G13690 vs. ExPASy Swiss-Prot
Match: Q941R6 (MLP-like protein 31 OS=Arabidopsis thaliana OX=3702 GN=MLP31 PE=2 SV=2) HSP 1 Score: 79.0 bits (193), Expect = 5.3e-14 Identity = 47/148 (31.76%), Postives = 83/148 (56.08%), Query Frame = 0
BLAST of Clc05G13690 vs. ExPASy Swiss-Prot
Match: P19825 (Major latex protein 15 OS=Papaver somniferum OX=3469 GN=MLP15 PE=2 SV=2) HSP 1 Score: 77.0 bits (188), Expect = 2.0e-13 Identity = 47/149 (31.54%), Postives = 77/149 (51.68%), Query Frame = 0
BLAST of Clc05G13690 vs. ExPASy TrEMBL
Match: A0A0A0LCM8 (Bet_v_1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G333840 PE=3 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 2.4e-70 Identity = 127/151 (84.11%), Postives = 143/151 (94.70%), Query Frame = 0
BLAST of Clc05G13690 vs. ExPASy TrEMBL
Match: A0A5D3BQS1 (Major latex protein 149-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001000 PE=3 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 4.1e-70 Identity = 125/151 (82.78%), Postives = 143/151 (94.70%), Query Frame = 0
BLAST of Clc05G13690 vs. ExPASy TrEMBL
Match: A0A1S3C4L4 (major latex protein 149-like OS=Cucumis melo OX=3656 GN=LOC103496825 PE=3 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 4.1e-70 Identity = 125/151 (82.78%), Postives = 143/151 (94.70%), Query Frame = 0
BLAST of Clc05G13690 vs. ExPASy TrEMBL
Match: A0A6J1F4J9 (kirola-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442103 PE=3 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 6.6e-60 Identity = 113/151 (74.83%), Postives = 134/151 (88.74%), Query Frame = 0
BLAST of Clc05G13690 vs. ExPASy TrEMBL
Match: A0A6J1IXD7 (kirola-like OS=Cucurbita maxima OX=3661 GN=LOC111481516 PE=3 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 1.6e-58 Identity = 111/151 (73.51%), Postives = 132/151 (87.42%), Query Frame = 0
BLAST of Clc05G13690 vs. TAIR 10
Match: AT1G70850.1 (MLP-like protein 34 ) HSP 1 Score: 84.7 bits (208), Expect = 6.8e-17 Identity = 50/145 (34.48%), Postives = 84/145 (57.93%), Query Frame = 0
BLAST of Clc05G13690 vs. TAIR 10
Match: AT1G70850.3 (MLP-like protein 34 ) HSP 1 Score: 84.7 bits (208), Expect = 6.8e-17 Identity = 50/145 (34.48%), Postives = 84/145 (57.93%), Query Frame = 0
BLAST of Clc05G13690 vs. TAIR 10
Match: AT1G70840.1 (MLP-like protein 31 ) HSP 1 Score: 79.0 bits (193), Expect = 3.7e-15 Identity = 47/148 (31.76%), Postives = 83/148 (56.08%), Query Frame = 0
BLAST of Clc05G13690 vs. TAIR 10
Match: AT5G28010.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 73.6 bits (179), Expect = 1.6e-13 Identity = 44/148 (29.73%), Postives = 79/148 (53.38%), Query Frame = 0
BLAST of Clc05G13690 vs. TAIR 10
Match: AT1G14930.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 67.0 bits (162), Expect = 1.5e-11 Identity = 42/149 (28.19%), Postives = 71/149 (47.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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