Clc05G13310 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G13310
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Unknown protein
Location	ClcChr05: 11644581 .. 11647346 (-)
RNA-Seq Expression	Clc05G13310
Synteny	Clc05G13310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCAAACGCTACTATTCGACTATTTTTGTTACAGATTCTATCATTTCGAAGCTATGGCTCTCAATCTTCATTGTTACCATTCATCAGCTCGCTTCCTTTCTCTCCATACAAAAGTTCAAGTTCTTCGCTCCGATAGTCTGAATCCAACTTCGAAACTGAGTTCAAATTCGCCCAAATTCCTCAGAATTCGAAGCTCCGTGGACTCAAACAACCAATTGACGCTTAGAACTTGCAGGAATTGCAAGGCGCAATTTGATCCCGCCCTCAATCACCCACGAGCTTGTCGATTTCACACTGCACATTTTGGAGGTAATGCCCTAACTTATTTGTAACTTTCTCCAATTTCGTAGCCATTTTGCGTTTCTGTTTTTTTACAATTTGAATGTGTTAAGGGATTTGGTTGCTGATCGGCTCTTGGTTTATTTATTATTTGTAATCCCTGTTTAGTTTGTTGTAAACAAGGTGCTATGTCAATTCATGGAACTGGAAATTGAATGTTCACACTTTTGGATTTACTTCAAATACTTGCAGATATCTATTCTTGATGTGGACAAACTAAACATGTGTTATGGTAGGTCTCTGTTGCATGATATACAAACATCTAATGATAAGAGTAAAATAGCAGTATGATGTAGGTATGAAAGTTTAGGAATTAAAGTGGAATAAGTTAGCATGTTTGATAACCATTTCGGCTCCATTTGATAACATTTTCATATTGAGTTGTATGTTTTTGAAATTTTTTCTTGTTTGCTTCCAATTTTTCAACTATGGTTTTCACCTTCCATAAAGAAACATTGAGTTCATTGTCAATTCTGAAAACAGAAGCTACTTTTTTAAAACTACATTCTTTTTAGTTTTTAAAATATGATTTAGTTTTTGAAAACATCAGAAGAAAACTAATTACAAAGCATAAAAACTCATGGGTGGAAGTAGTGTTTATAAGTTTAATTTTCAGAAAACAAAAAAACCAAAAACCAAATGGTTATAAAATAGGGCCTTAGAATTATGTTTGATTTTCTTTGGCTTTCTTTAGTTTTTTTTGAGACCTCTGGTTTGCTTTGTTTTGCTTATTAGATTTATTTGTTTTTCTTTTCTCTCTACCTTGTAGAGTTTGTATGCTTGACCACTAGTCTCTTTTTATTTTATCAATGAAAAGTTTAATTTCTTGTACAATAAAAGAATATTTATATATTTACTTCTTCATTAACTTATTTGTTTTGTTATCTACTTTCTAAGAATGTTTTCCATTTCCAAGGCAAACTTTGTAAACCAAAAAAAGTTGTCTTTCCGAAACTTATTTCTTTATTTTGGAATTTGGCTCAGAATTCAAACATTTCTTTAAGAGAAATGAAAACTATAGTAAAGAAGATGTGAGGAAAAAAACATAATTTTCAAACAAAAAATGAAGGTTGGGCAATCATTTGGTTTTGAAAATTAAGCCTATTTCTTCTCAATTTCTTACAATGGTTTGCATCTTTCTTAAGGAAAAGAGTTGGGTTCTTAGCCAAATTCCAAAAACAAAAACAAGTTTTTAAAAACTATTTATTCTAGTTCTCATAACTTGGCTTGGTTTTTTAAAACATTGGAAAAAAGTAGACAACAAAGCATAGAGGTAGGAGTGTTTATAGGCTTAATTTTTAAAAACTAACAGCCAAATGGTTATCAAATGAGGTCAAAATCATTGTCAAATGTGGCCTTGAAATTCGGGGATATCAAATTTATGTCTATTTACTACTGATGACTTTCTTGAACTTTGCAAATAATGACCATCTGTTTTTCCCTTTCGGTTGAGTCTCCTTAAACAATAGCTTCCAGCATTATCTTTAAATCTTAATTCTTAGCTATCAGGTACCAAAAAAACAAGAGCATGATGTTAATGCCTTCACAGGATTAAATGTATCTTATGAGTGTGTGTGTGTGTGTGATTATTGGAGGATTAAATGCCTAGTATTGCAAAGTCTTTCTTTTGATGCTTGTCTACACAGCCTTAAGTTGAAATGTTAAACATTGTGCATACTTCAAACATAACGAAATACATGCCGATTGATATCGATCAAAAGAGGCAAAGGTTCGAGATTGACTGTGAAAACTCGTAAATGCTTTGTGGCTCTTTAGTACCTGAAATGTTTTTGGATACTTTGAAGATTGAGAACAGACTGCAATGCATATTACTACTTAAAATCATTCTTGACTTTTTTCTGAAAGGTCCAAGTTCTAACTTTTGGAGTCATAAGTCATTATTTTGCTTCTCAAGATTTTAATCCATTCCTTTTTCTTACAGGTGAAACAAAGAGAAAGTTTGAAAGTGTACACTCAGGAGGAACAATGGACACTCCAAACTCTGGCAAAGTTTTTCAATACTGGCATTGTTGTGGGTCTGAGGATCCTTTCGATCCGGGATGTACTGCTTCTTTGCACTTGTCCTATGACGATGATTAATACAATAAATCGACAACCTTTTCTCCAGGTCCCCTCATTCCTGAAGTCTTGTGTACAAGTGTACATATTCATATACTATCTTAATTGTTTACTTGTACGAAAATCCATCTTACATTGTTGCCTCTTTATATGGGAATGTCAACAATATTAATATAGTTAATTACGGTTGAACATCTAGACCAATGGCAAATATGTATGATGATAATCAACAGGTAGCAAAATAGAAAGTAATGTGCATCGGAGCTACACACTTCAACACTTCAATTAGTATCGAGTTTATGAATTGTGTAGATAGAAGATAGTTATCGTATTTTAGTGTATCTCTTT

mRNA sequence

ATCAAACGCTACTATTCGACTATTTTTGTTACAGATTCTATCATTTCGAAGCTATGGCTCTCAATCTTCATTGTTACCATTCATCAGCTCGCTTCCTTTCTCTCCATACAAAAGTTCAAGTTCTTCGCTCCGATAGTCTGAATCCAACTTCGAAACTGAGTTCAAATTCGCCCAAATTCCTCAGAATTCGAAGCTCCGTGGACTCAAACAACCAATTGACGCTTAGAACTTGCAGGAATTGCAAGGCGCAATTTGATCCCGCCCTCAATCACCCACGAGCTTGTCGATTTCACACTGCACATTTTGGAGGTGAAACAAAGAGAAAGTTTGAAAGTGTACACTCAGGAGGAACAATGGACACTCCAAACTCTGGCAAAGTTTTTCAATACTGGCATTGTTGTGGGTCTGAGGATCCTTTCGATCCGGGATGTACTGCTTCTTTGCACTTGTCCTATGACGATGATTAATACAATAAATCGACAACCTTTTCTCCAGGTCCCCTCATTCCTGAAGTCTTGTGTACAAGTGTACATATTCATATACTATCTTAATTGTTTACTTGTACGAAAATCCATCTTACATTGTTGCCTCTTTATATGGGAATGTCAACAATATTAATATAGTTAATTACGGTTGAACATCTAGACCAATGGCAAATATGTATGATGATAATCAACAGGTAGCAAAATAGAAAGTAATGTGCATCGGAGCTACACACTTCAACACTTCAATTAGTATCGAGTTTATGAATTGTGTAGATAGAAGATAGTTATCGTATTTTAGTGTATCTCTTT

Coding sequence (CDS)

ATGGCTCTCAATCTTCATTGTTACCATTCATCAGCTCGCTTCCTTTCTCTCCATACAAAAGTTCAAGTTCTTCGCTCCGATAGTCTGAATCCAACTTCGAAACTGAGTTCAAATTCGCCCAAATTCCTCAGAATTCGAAGCTCCGTGGACTCAAACAACCAATTGACGCTTAGAACTTGCAGGAATTGCAAGGCGCAATTTGATCCCGCCCTCAATCACCCACGAGCTTGTCGATTTCACACTGCACATTTTGGAGGTGAAACAAAGAGAAAGTTTGAAAGTGTACACTCAGGAGGAACAATGGACACTCCAAACTCTGGCAAAGTTTTTCAATACTGGCATTGTTGTGGGTCTGAGGATCCTTTCGATCCGGGATGTACTGCTTCTTTGCACTTGTCCTATGACGATGATTAA

Protein sequence

MALNLHCYHSSARFLSLHTKVQVLRSDSLNPTSKLSSNSPKFLRIRSSVDSNNQLTLRTCRNCKAQFDPALNHPRACRFHTAHFGGETKRKFESVHSGGTMDTPNSGKVFQYWHCCGSEDPFDPGCTASLHLSYDDD

Homology

[Close]

BLAST of Clc05G13310 vs. NCBI nr
Match: XP_038879129.1 (uncharacterized protein LOC120071126 [Benincasa hispida] >XP_038879138.1 uncharacterized protein LOC120071126 [Benincasa hispida] >XP_038879146.1 uncharacterized protein LOC120071126 [Benincasa hispida] >XP_038879154.1 uncharacterized protein LOC120071126 [Benincasa hispida])

HSP 1 Score: 271.6 bits (693), Expect = 3.8e-69
Identity = 127/137 (92.70%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 1   MALNLHCYHSSARFLSLHTKVQVLRSDSLNPTSKLSSNSPKFLRIRSSVDSNNQLTLRTC 60
           MALNLHCYHSSARFLSLH K+QV+RSD LN TSKLSSNSPKFLRIRSS DSNNQLTLRTC
Sbjct: 1   MALNLHCYHSSARFLSLHPKLQVIRSDRLNRTSKLSSNSPKFLRIRSSADSNNQLTLRTC 60

Query: 61  RNCKAQFDPALNHPRACRFHTAHFGGETKRKFESVHSGGTMDTPNSGKVFQYWHCCGSED 120
           RNCKAQFDP+LNHPRACRFHTAHFGGETKRKFESVHSGGTMDTP+SGKVFQYWHCCGSED
Sbjct: 61  RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSGGTMDTPDSGKVFQYWHCCGSED 120

Query: 121 PFDPGCTASLHLSYDDD 138
           PFDPGCTAS H SYDDD
Sbjct: 121 PFDPGCTASPHSSYDDD 137

[Close]

BLAST of Clc05G13310 vs. NCBI nr
Match: XP_011651192.1 (uncharacterized protein LOC101208221 [Cucumis sativus])

HSP 1 Score: 254.6 bits (649), Expect = 4.8e-64
Identity = 119/137 (86.86%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 1   MALNLHCYHSSARFLSLHTKVQVLRSDSLNPTSKLSSNSPKFLRIRSSVDSNNQLTLRTC 60
           MA NLHCYHSSA F+SLH+K  VLRSD+LN TSKLSSNSPK L IR S +SNNQLTLRTC
Sbjct: 1   MAPNLHCYHSSAPFISLHSKFLVLRSDALNRTSKLSSNSPKILTIRCSANSNNQLTLRTC 60

Query: 61  RNCKAQFDPALNHPRACRFHTAHFGGETKRKFESVHSGGTMDTPNSGKVFQYWHCCGSED 120
           RNCKAQFDP+LNHPRACRFHT+HFGGETKRKFESVHSGGTMDTP+SGKVFQYWHCCGSED
Sbjct: 61  RNCKAQFDPSLNHPRACRFHTSHFGGETKRKFESVHSGGTMDTPDSGKVFQYWHCCGSED 120

Query: 121 PFDPGCTASLHLSYDDD 138
           PFDPGCTAS H SYDDD
Sbjct: 121 PFDPGCTASPHSSYDDD 137

[Close]

BLAST of Clc05G13310 vs. NCBI nr
Match: XP_022997797.1 (uncharacterized protein LOC111492645 [Cucurbita maxima])

HSP 1 Score: 236.1 bits (601), Expect = 1.8e-58
Identity = 110/136 (80.88%), Postives = 121/136 (88.97%), Query Frame = 0


Query: 1   MALNLHCYHSSARFLSLHTKVQVLRSDSLNPTSKLSSNSPKFLRIRSSVDSNNQLTLRTC 60
           MALNLHC   SARF+S H++V+  RS  LN TSKLS+NSPK  RIRSS +S+NQLTLRTC
Sbjct: 12  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSPKIYRIRSSANSSNQLTLRTC 71

Query: 61  RNCKAQFDPALNHPRACRFHTAHFGGETKRKFESVHSGGTMDTPNSGKVFQYWHCCGSED 120
           RNCKAQFDP+LNHPRACRFHTAHFGGETKRKFESVH+GGTMDTP+SGKV QYWHCCGSED
Sbjct: 72  RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED 131

Query: 121 PFDPGCTASLHLSYDD 137
           PFDPGCTA+ H SYDD
Sbjct: 132 PFDPGCTAAPHSSYDD 147

[Close]

BLAST of Clc05G13310 vs. NCBI nr
Match: XP_008457102.1 (PREDICTED: uncharacterized protein LOC103496857 [Cucumis melo])

HSP 1 Score: 236.1 bits (601), Expect = 1.8e-58
Identity = 112/137 (81.75%), Postives = 119/137 (86.86%), Query Frame = 0


Query: 1   MALNLHCYHSSARFLSLHTKVQVLRSDSLNPTSKLSSNSPKFLRIRSSVDSNNQLTLRTC 60
           MA NLHCYHSS  F+SLH+   VLRS +  PTSK  SNS KFL IR S +SNNQLTLRTC
Sbjct: 1   MAPNLHCYHSSPPFISLHSYPLVLRSHAPYPTSKHCSNSLKFLSIRCSANSNNQLTLRTC 60

Query: 61  RNCKAQFDPALNHPRACRFHTAHFGGETKRKFESVHSGGTMDTPNSGKVFQYWHCCGSED 120
           RNCK+QFDP+LNHPRACRFHTAHFGGETKRKFESVH GGTMDTP+SGKVFQYWHCCGSED
Sbjct: 61  RNCKSQFDPSLNHPRACRFHTAHFGGETKRKFESVHLGGTMDTPDSGKVFQYWHCCGSED 120

Query: 121 PFDPGCTASLHLSYDDD 138
           PFDPGCTAS H SYDDD
Sbjct: 121 PFDPGCTASPHSSYDDD 137

[Close]

BLAST of Clc05G13310 vs. NCBI nr
Match: KAG6606995.1 (hypothetical protein SDJN03_00337, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235.0 bits (598), Expect = 4.0e-58
Identity = 110/136 (80.88%), Postives = 122/136 (89.71%), Query Frame = 0


Query: 1   MALNLHCYHSSARFLSLHTKVQVLRSDSLNPTSKLSSNSPKFLRIRSSVDSNNQLTLRTC 60
           MALNLHC   SARF+S+H++V+  RS  LN TSKLS+NS KF RIRSS +SN+QLTLRTC
Sbjct: 1   MALNLHCCCLSARFISIHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTC 60

Query: 61  RNCKAQFDPALNHPRACRFHTAHFGGETKRKFESVHSGGTMDTPNSGKVFQYWHCCGSED 120
           RNCKAQFDP+LNHPRACRFHTAHFGGETKRKFESVH+GGTMDTP+SGKV QYWHCCGSED
Sbjct: 61  RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED 120

Query: 121 PFDPGCTASLHLSYDD 137
           PFDPGCTA+ H SYDD
Sbjct: 121 PFDPGCTAAPHSSYDD 136

[Close]

BLAST of Clc05G13310 vs. ExPASy TrEMBL
Match: A0A0A0L8V5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G185090 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.3e-64
Identity = 119/137 (86.86%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 1   MALNLHCYHSSARFLSLHTKVQVLRSDSLNPTSKLSSNSPKFLRIRSSVDSNNQLTLRTC 60
           MA NLHCYHSSA F+SLH+K  VLRSD+LN TSKLSSNSPK L IR S +SNNQLTLRTC
Sbjct: 1   MAPNLHCYHSSAPFISLHSKFLVLRSDALNRTSKLSSNSPKILTIRCSANSNNQLTLRTC 60

Query: 61  RNCKAQFDPALNHPRACRFHTAHFGGETKRKFESVHSGGTMDTPNSGKVFQYWHCCGSED 120
           RNCKAQFDP+LNHPRACRFHT+HFGGETKRKFESVHSGGTMDTP+SGKVFQYWHCCGSED
Sbjct: 61  RNCKAQFDPSLNHPRACRFHTSHFGGETKRKFESVHSGGTMDTPDSGKVFQYWHCCGSED 120

Query: 121 PFDPGCTASLHLSYDDD 138
           PFDPGCTAS H SYDDD
Sbjct: 121 PFDPGCTASPHSSYDDD 137

[Close]

BLAST of Clc05G13310 vs. ExPASy TrEMBL
Match: A0A6J1K626 (uncharacterized protein LOC111492645 OS=Cucurbita maxima OX=3661 GN=LOC111492645 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 8.6e-59
Identity = 110/136 (80.88%), Postives = 121/136 (88.97%), Query Frame = 0


Query: 1   MALNLHCYHSSARFLSLHTKVQVLRSDSLNPTSKLSSNSPKFLRIRSSVDSNNQLTLRTC 60
           MALNLHC   SARF+S H++V+  RS  LN TSKLS+NSPK  RIRSS +S+NQLTLRTC
Sbjct: 12  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSPKIYRIRSSANSSNQLTLRTC 71

Query: 61  RNCKAQFDPALNHPRACRFHTAHFGGETKRKFESVHSGGTMDTPNSGKVFQYWHCCGSED 120
           RNCKAQFDP+LNHPRACRFHTAHFGGETKRKFESVH+GGTMDTP+SGKV QYWHCCGSED
Sbjct: 72  RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED 131

Query: 121 PFDPGCTASLHLSYDD 137
           PFDPGCTA+ H SYDD
Sbjct: 132 PFDPGCTAAPHSSYDD 147

[Close]

BLAST of Clc05G13310 vs. ExPASy TrEMBL
Match: A0A1S3C5F2 (uncharacterized protein LOC103496857 OS=Cucumis melo OX=3656 GN=LOC103496857 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 8.6e-59
Identity = 112/137 (81.75%), Postives = 119/137 (86.86%), Query Frame = 0


Query: 1   MALNLHCYHSSARFLSLHTKVQVLRSDSLNPTSKLSSNSPKFLRIRSSVDSNNQLTLRTC 60
           MA NLHCYHSS  F+SLH+   VLRS +  PTSK  SNS KFL IR S +SNNQLTLRTC
Sbjct: 1   MAPNLHCYHSSPPFISLHSYPLVLRSHAPYPTSKHCSNSLKFLSIRCSANSNNQLTLRTC 60

Query: 61  RNCKAQFDPALNHPRACRFHTAHFGGETKRKFESVHSGGTMDTPNSGKVFQYWHCCGSED 120
           RNCK+QFDP+LNHPRACRFHTAHFGGETKRKFESVH GGTMDTP+SGKVFQYWHCCGSED
Sbjct: 61  RNCKSQFDPSLNHPRACRFHTAHFGGETKRKFESVHLGGTMDTPDSGKVFQYWHCCGSED 120

Query: 121 PFDPGCTASLHLSYDDD 138
           PFDPGCTAS H SYDDD
Sbjct: 121 PFDPGCTASPHSSYDDD 137

[Close]

BLAST of Clc05G13310 vs. ExPASy TrEMBL
Match: A0A6J1G9P5 (uncharacterized protein LOC111452227 OS=Cucurbita moschata OX=3662 GN=LOC111452227 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 3.3e-58
Identity = 110/136 (80.88%), Postives = 121/136 (88.97%), Query Frame = 0


Query: 1   MALNLHCYHSSARFLSLHTKVQVLRSDSLNPTSKLSSNSPKFLRIRSSVDSNNQLTLRTC 60
           MALNLHC   SARF+S H++V+  RS  LN TSKLS+NS KF RIRSS +SN+QLTLRTC
Sbjct: 1   MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTC 60

Query: 61  RNCKAQFDPALNHPRACRFHTAHFGGETKRKFESVHSGGTMDTPNSGKVFQYWHCCGSED 120
           RNCKAQFDP+LNHPRACRFHTAHFGGETKRKFESVH+GGTMDTP+SGKV QYWHCCGSED
Sbjct: 61  RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED 120

Query: 121 PFDPGCTASLHLSYDD 137
           PFDPGCTA+ H SYDD
Sbjct: 121 PFDPGCTAAPHSSYDD 136

[Close]

BLAST of Clc05G13310 vs. ExPASy TrEMBL
Match: A0A6J1CNX1 (uncharacterized protein LOC111013199 OS=Momordica charantia OX=3673 GN=LOC111013199 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.2e-57
Identity = 111/138 (80.43%), Postives = 120/138 (86.96%), Query Frame = 0


Query: 1   MALNLHCYHSSARFLSLHTKV--QVLRSDSLNPTSKLSSNSPKFLRIRSSVDSNNQLTLR 60
           MALNLHCY SS RFL L  K   +VLRSD LN  SKLS++S KF  IR+S +SNNQLTLR
Sbjct: 1   MALNLHCYCSSTRFLPLTPKAPSEVLRSDRLNRASKLSADSTKFHTIRNSANSNNQLTLR 60

Query: 61  TCRNCKAQFDPALNHPRACRFHTAHFGGETKRKFESVHSGGTMDTPNSGKVFQYWHCCGS 120
           TCRNCK QFDP+LNHPRACRFHTAHFGGETKRKFESVH+GGTMDTP+SGKVFQYWHCCGS
Sbjct: 61  TCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVFQYWHCCGS 120

Query: 121 EDPFDPGCTASLHLSYDD 137
           EDPFDPGCTA+ H SYDD
Sbjct: 121 EDPFDPGCTAAPHSSYDD 138

[Close]

BLAST of Clc05G13310 vs. TAIR 10
Match: AT5G38060.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G65000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 167.9 bits (424), Expect = 5.6e-42
Identity = 77/114 (67.54%), Postives = 88/114 (77.19%), Query Frame = 0


Query: 23  VLRSDSLNPTSKLSSNSPKFLRIRSSVDSNNQLTLRTCRNCKAQFDPALNHPRACRFHTA 82
           ++ S SL        NS +F    ++  S+   TLRTC+NCK QFDP LN+PRACRFHTA
Sbjct: 21  LIHSHSLKTLKTPKLNSRQFFSQCTASSSDGPKTLRTCKNCKTQFDPLLNNPRACRFHTA 80

Query: 83  HFGGETKRKFESVHSGGTMDTPNSGKVFQYWHCCGSEDPFDPGCTASLHLSYDD 137
           HFGGETKRKFESV++GGTMDTPNSGKV QYWHCCGSEDPFD GCTAS H +YDD
Sbjct: 81  HFGGETKRKFESVYTGGTMDTPNSGKVLQYWHCCGSEDPFDSGCTASPHTTYDD 134

[Close]

BLAST of Clc05G13310 vs. TAIR 10
Match: AT5G38060.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 138.7 bits (348), Expect = 3.6e-33
Identity = 67/114 (58.77%), Postives = 76/114 (66.67%), Query Frame = 0


Query: 23  VLRSDSLNPTSKLSSNSPKFLRIRSSVDSNNQLTLRTCRNCKAQFDPALNHPRACRFHTA 82
           ++ S SL        NS +F    ++  S+   TLRTC+NCK QFDP LN+PRACRFHTA
Sbjct: 21  LIHSHSLKTLKTPKLNSRQFFSQCTASSSDGPKTLRTCKNCKTQFDPLLNNPRACRFHTA 80

Query: 83  HFGGETKRKFESVHSGGTMDTPNSGKVFQYWHCCGSEDPFDPGCTASLHLSYDD 137
           HFG            GGTMDTPNSGKV QYWHCCGSEDPFD GCTAS H +YDD
Sbjct: 81  HFG------------GGTMDTPNSGKVLQYWHCCGSEDPFDSGCTASPHTTYDD 122

[Close]

BLAST of Clc05G13310 vs. TAIR 10
Match: AT1G65000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38060.1); Has 49 Blast hits to 49 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.8 bits (133), Expect = 3.1e-08
Identity = 29/83 (34.94%), Postives = 42/83 (50.60%), Query Frame = 0


Query: 58  RTCRNCKAQFDPALNHPRACRFHTAHF----GGETKRKFESVHSGGTMDTPNSGKVFQYW 117
           + C+ CK  +    N   +CRFH + F      + KR +E        D P + K   ++
Sbjct: 8   KLCQRCKQSYTDLSNETSSCRFHPSFFVCRRHDDQKRYYELKPD----DPPYAAK---FY 67

Query: 118 HCCGSEDPFDPGCTASLHLSYDD 137
            CCG+EDP  PGC  + H+SYDD
Sbjct: 68  DCCGAEDPNAPGCVTNPHISYDD 83

The following BLAST results are available for this feature:

BLAST of Clc05G13310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879129.1	3.8e-69	92.70	uncharacterized protein LOC120071126 [Benincasa hispida] >XP_038879138.1 unchara...	[more]
XP_011651192.1	4.8e-64	86.86	uncharacterized protein LOC101208221 [Cucumis sativus]	[more]
XP_022997797.1	1.8e-58	80.88	uncharacterized protein LOC111492645 [Cucurbita maxima]	[more]
XP_008457102.1	1.8e-58	81.75	PREDICTED: uncharacterized protein LOC103496857 [Cucumis melo]	[more]
KAG6606995.1	4.0e-58	80.88	hypothetical protein SDJN03_00337, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Clc05G13310 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc05G13310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8V5	2.3e-64	86.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G185090 PE=4 SV=1	[more]
A0A6J1K626	8.6e-59	80.88	uncharacterized protein LOC111492645 OS=Cucurbita maxima OX=3661 GN=LOC111492645...	[more]
A0A1S3C5F2	8.6e-59	81.75	uncharacterized protein LOC103496857 OS=Cucumis melo OX=3656 GN=LOC103496857 PE=...	[more]
A0A6J1G9P5	3.3e-58	80.88	uncharacterized protein LOC111452227 OS=Cucurbita moschata OX=3662 GN=LOC1114522...	[more]
A0A6J1CNX1	1.2e-57	80.43	uncharacterized protein LOC111013199 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of Clc05G13310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38060.1	5.6e-42	67.54	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G38060.2	3.6e-33	58.77	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G65000.1	3.1e-08	34.94	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35106	BNAA07G25190D PROTEIN	coord: 2..136
None	No IPR available	PANTHER	PTHR35106:SF5	CARBOXYPEPTIDASE	coord: 2..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G13310.1	Clc05G13310.1	mRNA