Clc05G12960 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G12960
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	zinc finger protein 7-like
Location	ClcChr05: 10959760 .. 10961285 (+)
RNA-Seq Expression	Clc05G12960
Synteny	Clc05G12960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGAGGTAAATAATTGAAGGGGGGGTTGAATATCTGATTTTGTGAAAGCATCTCCAACGTAAAAAAGTGGTATAATTTGAGAAATTGGGGGATGGGAAAGATTGATGGAAGTGGGGAATCCTTTAGCTTGAAAGGGAAACTGTAGAGATGACATAAGCATTGTCCACTGGACCACTAATGGTCGGGAGACAATGAGAAGATAAGAAATGCAAAAACATATATTATACCAAGACTTGGACTTTCATCCTCACAGCTTTCTCACGCATATTTGTTCATCTGAGAAAACCAAGAATCAAAATTTGTTATTACCAAAGCTTTCAGTAGTAGTAGTAGTTGTTGTTTTAGGATTAGACAAAGAATCAGCCAAGCAATCCTGTCCATTTTATACTTTCAATATCATTTCTACTACTAATTTGGGAATCTGGGTTTGCAATGATTTTTCAAGGAGAACAAATTGAATCATTGAAAGAGAACAAAGGACAAGATGAATCAAATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAAGAGACCAACCTGATGGCGTTGGAGCTTTGGAGTGGCTGAACTTGAGCTTGGGAAGGAACAAACAGCTTTTAACTGAATCACAAAGATCCGCAGCTTCAACCAAGACTTTTTCATGCAACTTCTGTAAGAGGGTATTCTATAGTTCACAAGCATTGGGAGGCCATCAAAATGCTCACAAGAGAGAGAGAAGTGCAGCCAGAAGACACCAAGCCCACAAAATGATGACTCTGCTTGGTCTTCCAATTCATAATTCTATGGTTAGATCACTTGGTGTTCAACCACATTCACTAGTGCACAAACCAGGCAGGGAAGACACTGCTGTAGTAGCAAGATTTAATCATGTCAAAACTGGTTCATGGGCACCTTTCATGCTGAGAGATGCCGTGGACTTCATGTGGCCAGGAAGCTTCCGCTTCGCTCAACATCAAATTCTCCCAGAGCCGCCACCGCCACCACCACCACCACAACAAGAACCGCCGATGGAATCATTCAAGCTCGACCTGAATCTCCGACTTTAATTCTGTATTGTTGTAATAATATGGAATTGTCTTCTTCTTCATTCCTATAGTGCTCAATAGCTCATTCATATATATATCAAGTACATGACTAACTTTAGGGGAAGTGTTATAATCCTATGTGAAATCAGGAAGATGCACCATTAATGTTATATCTCTTCTGCCTGTTGAAACACAAGAGGCCTGATTTGTTTCAACCATAAGGTGTTTAAATTACATCAAACTAAGTAGGCTGTAAGGGGGAAGGAAAAAAATCAATAATAATTTGGAACTTTAAGATTCTTGCTTCTGCCATGGTTTCCCATTAGGGAGAAATGTCCCATATACATTTCAGTGCTCAATCACAGGTCAGTCAGAGCTTCACCTTCCAGTGTTCAGAAGATGAAAACATCCAGAAATCTTGGAAGTAAGCTCCATCAGCATGGAGGAGGATTTGATACCAATTTGACTTGCTGACAGCATTTTTACTCGTTCAATTTGA

mRNA sequence

GTTGAGGTAAATAATTGAAGGGGGGGTTGAATATCTGATTTTGTGAAAGCATCTCCAACGTAAAAAAGTGGTATAATTTGAGAAATTGGGGGATGGGAAAGATTGATGGAAGTGGGGAATCCTTTAGCTTGAAAGGGAAACTGTAGAGATGACATAAGCATTGTCCACTGGACCACTAATGGTCGGGAGACAATGAGAAGATAAGAAATGCAAAAACATATATTATACCAAGACTTGGACTTTCATCCTCACAGCTTTCTCACGCATATTTGTTCATCTGAGAAAACCAAGAATCAAAATTTGTTATTACCAAAGCTTTCAGTAGTAGTAGTAGTTGTTGTTTTAGGATTAGACAAAGAATCAGCCAAGCAATCCTGTCCATTTTATACTTTCAATATCATTTCTACTACTAATTTGGGAATCTGGGTTTGCAATGATTTTTCAAGGAGAACAAATTGAATCATTGAAAGAGAACAAAGGACAAGATGAATCAAATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAAGAGACCAACCTGATGGCGTTGGAGCTTTGGAGTGGCTGAACTTGAGCTTGGGAAGGAACAAACAGCTTTTAACTGAATCACAAAGATCCGCAGCTTCAACCAAGACTTTTTCATGCAACTTCTGTAAGAGGGTATTCTATAGTTCACAAGCATTGGGAGGCCATCAAAATGCTCACAAGAGAGAGAGAAGTGCAGCCAGAAGACACCAAGCCCACAAAATGATGACTCTGCTTGGTCTTCCAATTCATAATTCTATGGTTAGATCACTTGGTGTTCAACCACATTCACTAGTGCACAAACCAGGCAGGGAAGACACTGCTGTAGTAGCAAGATTTAATCATGTCAAAACTGGTTCATGGGCACCTTTCATGCTGAGAGATGCCGTGGACTTCATGTGGCCAGGAAGCTTCCGCTTCGCTCAACATCAAATTCTCCCAGAGCCGCCACCGCCACCACCACCACCACAACAAGAACCGCCGATGGAATCATTCAAGCTCGACCTGAATCTCCGACTTTAATTCTGTATTGTTGTAATAATATGGAATTGTCTTCTTCTTCATTCCTATAGTGCTCAATAGCTCATTCATATATATATCAAGTACATGACTAACTTTAGGGGAAGTGTTATAATCCTATGTGAAATCAGGAAGATGCACCATTAATGTTATATCTCTTCTGCCTGTTGAAACACAAGAGGCCTGATTTGTTTCAACCATAAGGTGTTTAAATTACATCAAACTAAGTAGGCTGTAAGGGGGAAGGAAAAAAATCAATAATAATTTGGAACTTTAAGATTCTTGCTTCTGCCATGGTTTCCCATTAGGGAGAAATGTCCCATATACATTTCAGTGCTCAATCACAGGTCAGTCAGAGCTTCACCTTCCAGTGTTCAGAAGATGAAAACATCCAGAAATCTTGGAAGTAAGCTCCATCAGCATGGAGGAGGATTTGATACCAATTTGACTTGCTGACAGCATTTTTACTCGTTCAATTTGA

Coding sequence (CDS)

ATGATTTTTCAAGGAGAACAAATTGAATCATTGAAAGAGAACAAAGGACAAGATGAATCAAATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAAGAGACCAACCTGATGGCGTTGGAGCTTTGGAGTGGCTGAACTTGAGCTTGGGAAGGAACAAACAGCTTTTAACTGAATCACAAAGATCCGCAGCTTCAACCAAGACTTTTTCATGCAACTTCTGTAAGAGGGTATTCTATAGTTCACAAGCATTGGGAGGCCATCAAAATGCTCACAAGAGAGAGAGAAGTGCAGCCAGAAGACACCAAGCCCACAAAATGATGACTCTGCTTGGTCTTCCAATTCATAATTCTATGGTTAGATCACTTGGTGTTCAACCACATTCACTAGTGCACAAACCAGGCAGGGAAGACACTGCTGTAGTAGCAAGATTTAATCATGTCAAAACTGGTTCATGGGCACCTTTCATGCTGAGAGATGCCGTGGACTTCATGTGGCCAGGAAGCTTCCGCTTCGCTCAACATCAAATTCTCCCAGAGCCGCCACCGCCACCACCACCACCACAACAAGAACCGCCGATGGAATCATTCAAGCTCGACCTGAATCTCCGACTTTAA

Protein sequence

MIFQGEQIESLKENKGQDESNEEEEEEEEEEARDQPDGVGALEWLNLSLGRNKQLLTESQRSAASTKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLGLPIHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKTGSWAPFMLRDAVDFMWPGSFRFAQHQILPEPPPPPPPPQQEPPMESFKLDLNLRL

Homology

[Close]

BLAST of Clc05G12960 vs. NCBI nr
Match: XP_038876126.1 (zinc finger protein 7-like [Benincasa hispida])

HSP 1 Score: 359.0 bits (920), Expect = 2.7e-95
Identity = 185/204 (90.69%), Postives = 189/204 (92.65%), Query Frame = 0


Query: 1   MIFQGEQIESLKENKGQDESNEEEEEEEEEEARDQPDGVGALEWLNLSLGRNKQLLTESQ 60
           MIFQGEQIESLKENKGQDESN     EEEEEA DQPDGVGALEWLNLSLGRNKQLLTESQ
Sbjct: 1   MIFQGEQIESLKENKGQDESN-----EEEEEATDQPDGVGALEWLNLSLGRNKQLLTESQ 60

Query: 61  RSAASTKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLGLPIHNSMVR 120
           RSAAS KTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAH+MMTLLGLPIHNSMVR
Sbjct: 61  RSAASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHRMMTLLGLPIHNSMVR 120

Query: 121 SLGVQPHSLVHKPGREDTAVVARFNHVKTGSWAPFMLRDAVDFMWPGSFRFAQHQILPEP 180
           SLGVQPHSLVHKPGREDTAVVARFNH+KT SWAPFML DA+DFMWPGSFRFAQHQILPEP
Sbjct: 121 SLGVQPHSLVHKPGREDTAVVARFNHIKTSSWAPFMLGDAMDFMWPGSFRFAQHQILPEP 180

Query: 181 PPPPPPPQQEPPMESFKLDLNLRL 205
           PPP     +EPPME FKLDLNLRL
Sbjct: 181 PPP-----REPPMEPFKLDLNLRL 194

[Close]

BLAST of Clc05G12960 vs. NCBI nr
Match: XP_008456235.1 (PREDICTED: zinc finger protein 7-like [Cucumis melo] >KAA0037198.1 zinc finger protein 7-like [Cucumis melo var. makuwa])

HSP 1 Score: 354.8 bits (909), Expect = 5.1e-94
Identity = 188/214 (87.85%), Postives = 192/214 (89.72%), Query Frame = 0


Query: 1   MIFQGEQIESLKENKGQDESNEEEEEEE---------EEEARDQPDGVGALEWLNLSLGR 60
           MIFQGEQIES KENKGQDESNEEEEEEE         EEEARDQPDGVGALEWL+LSLGR
Sbjct: 1   MIFQGEQIESFKENKGQDESNEEEEEEEEELDEEAELEEEARDQPDGVGALEWLSLSLGR 60

Query: 61  NKQLLTESQRSAASTKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLG 120
           NKQ L +SQRSAASTKTFSCNFCKR+FYSSQALGGHQNAHKRERSAARRHQAHKMMTLLG
Sbjct: 61  NKQPLNDSQRSAASTKTFSCNFCKRIFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLG 120

Query: 121 LPIHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKTGSW-APFMLRDAVDFMWPGSFR 180
           LPIHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVK GSW APFML DA DFMWPGSFR
Sbjct: 121 LPIHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKNGSWAAPFMLGDATDFMWPGSFR 180

Query: 181 FAQHQILPEPPPPPPPPQQEPPMESFKLDLNLRL 205
           FAQHQILPEPPPP     +EPPME FKLDLNLRL
Sbjct: 181 FAQHQILPEPPPP-----REPPMEPFKLDLNLRL 209

[Close]

BLAST of Clc05G12960 vs. NCBI nr
Match: XP_011651233.1 (zinc finger protein 7 [Cucumis sativus] >KGN57489.1 hypothetical protein Csa_010876 [Cucumis sativus])

HSP 1 Score: 349.4 bits (895), Expect = 2.2e-92
Identity = 185/210 (88.10%), Postives = 191/210 (90.95%), Query Frame = 0


Query: 1   MIFQGEQIESLKENKGQDESNEEE-----EEEEEEEARDQPDGVGALEWLNLSLGRNKQL 60
           MIFQGEQIES KENKGQDESNEEE     EE E EEARDQPDGVGALEWL+LSLGRNKQ 
Sbjct: 1   MIFQGEQIESFKENKGQDESNEEEEAELDEEAELEEARDQPDGVGALEWLSLSLGRNKQP 60

Query: 61  LTESQRSAASTKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLGLPIH 120
           L +SQRSAASTKTFSCNFCKR+FYSSQALGGHQNAHKRERSAARRHQAHKMMTLLGLPIH
Sbjct: 61  LNDSQRSAASTKTFSCNFCKRIFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLGLPIH 120

Query: 121 NSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKTGSW-APFMLRDAVDFMWPGSFRFAQH 180
           NSMVRSLGVQPHSLVHKPGREDTAVVARFNHVK GSW APFML DA+DFMWPGSFRFAQH
Sbjct: 121 NSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKNGSWAAPFMLGDAMDFMWPGSFRFAQH 180

Query: 181 QILPEPPPPPPPPQQEPPMESFKLDLNLRL 205
           QILPEPPPP     +EPPME FKLDL+LRL
Sbjct: 181 QILPEPPPP-----REPPMEPFKLDLSLRL 205

[Close]

BLAST of Clc05G12960 vs. NCBI nr
Match: XP_022922826.1 (zinc finger protein 4-like [Cucurbita moschata])

HSP 1 Score: 329.3 bits (843), Expect = 2.3e-86
Identity = 173/206 (83.98%), Postives = 182/206 (88.35%), Query Frame = 0


Query: 1   MIFQGEQIESLKENKGQDES--NEEEEEEEEEEARDQPDGVGALEWLNLSLGRNKQLLTE 60
           MIFQGEQIESLKE KG++ES   EEEEEEEEEEA DQP+GVGALEWLNLSLGRNKQLLTE
Sbjct: 1   MIFQGEQIESLKEKKGENESVEEEEEEEEEEEEATDQPEGVGALEWLNLSLGRNKQLLTE 60

Query: 61  SQRSAASTKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLGLPIHNSM 120
           SQ SA S KTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQA +MMTLLGLPIHNSM
Sbjct: 61  SQSSAGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPIHNSM 120

Query: 121 VRSLGVQPHSLVHKPGREDTAVVARFNHVKTGSWAPFMLRDAVDFMWPGSFRFAQHQILP 180
           VRSLGVQPHSLVHK  REDTA+VARFNHVK+GSWAPFML DA+D  WPGSFRF QHQ+LP
Sbjct: 121 VRSLGVQPHSLVHKTSREDTAIVARFNHVKSGSWAPFMLGDAMDLRWPGSFRFTQHQVLP 180

Query: 181 EPPPPPPPPQQEPPMESFKLDLNLRL 205
           E      PP +EP ME FKLDLNLRL
Sbjct: 181 E-----SPPLREPQMEPFKLDLNLRL 201

[Close]

BLAST of Clc05G12960 vs. NCBI nr
Match: XP_023551737.1 (zinc finger protein 4-like [Cucurbita pepo subsp. pepo] >KAG7014956.1 Zinc finger protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 327.8 bits (839), Expect = 6.7e-86
Identity = 172/204 (84.31%), Postives = 180/204 (88.24%), Query Frame = 0


Query: 1   MIFQGEQIESLKENKGQDESNEEEEEEEEEEARDQPDGVGALEWLNLSLGRNKQLLTESQ 60
           MIFQGEQIESLKE KG+DES   EEEEEEEEA DQP+GVGALEWLNLSLGRNKQLLTESQ
Sbjct: 1   MIFQGEQIESLKEKKGEDES--VEEEEEEEEATDQPEGVGALEWLNLSLGRNKQLLTESQ 60

Query: 61  RSAASTKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLGLPIHNSMVR 120
            SA S KTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQA +MMTLLGLPIHNSMVR
Sbjct: 61  SSAGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPIHNSMVR 120

Query: 121 SLGVQPHSLVHKPGREDTAVVARFNHVKTGSWAPFMLRDAVDFMWPGSFRFAQHQILPEP 180
           SLGVQPHSLVHK  REDTA+VARFNHVK+GSWAPFML DA+D  WPGSFRF QHQ+LPE 
Sbjct: 121 SLGVQPHSLVHKTSREDTAIVARFNHVKSGSWAPFMLGDAMDLRWPGSFRFTQHQVLPE- 180

Query: 181 PPPPPPPQQEPPMESFKLDLNLRL 205
                PP +EP ME FKLDLNLRL
Sbjct: 181 ----SPPLREPQMEPFKLDLNLRL 197

[Close]

BLAST of Clc05G12960 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 6.9e-17
Identity = 57/154 (37.01%), Postives = 78/154 (50.65%), Query Frame = 0


Query: 58  ESQRSAASTKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQ--------------- 117
           + Q+ + S + FSCN+C+R FYSSQALGGHQNAHKRER+ A+R                 
Sbjct: 74  QQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSS 133

Query: 118 ----AHKMMTLLGLPIHNS------MVRSLGVQPHSLVHKPG----REDTAV--VARFNH 177
               A     L  LP+H S        R+LG++ HS  H         +T +  +ARFN 
Sbjct: 134 NYAAAATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARFNQ 193

Query: 178 VKTGSWAPFMLR-DAVDFMWPGSFRFAQHQILPE 180
              G+  PF +  D  + +WPGSFR A + +  E
Sbjct: 194 GYFGNCIPFYVEDDEAEMLWPGSFRQATNAVAVE 227

[Close]

BLAST of Clc05G12960 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.8e-15
Identity = 55/132 (41.67%), Postives = 73/132 (55.30%), Query Frame = 0


Query: 57  TESQRSAASTKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLGLPIHN 116
           T+S +  A+ + FSCN+C+R FYSSQALGGHQNAHKRER+ A+R      M       + 
Sbjct: 47  TKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYT 106

Query: 117 SMVRSLGVQPHS-LVHKPGREDTAVVARFNHV-KTGSWAPFML---RDAVDFMWPGSFRF 176
               SLG+Q HS L+H    +   +V+RF+H    G+  P          DF WPGSFR 
Sbjct: 107 YTSSSLGMQAHSGLLHHTLSQPQPLVSRFHHQGYFGNTVPLFFDYDDGGSDFFWPGSFR- 166

Query: 177 AQHQILPEPPPP 184
              Q++ E   P
Sbjct: 167 ---QVVEEAEAP 174

[Close]

BLAST of Clc05G12960 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-14
Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 0


Query: 60  QRSAASTKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHKM------------- 119
           Q   A  + FSCN+C+R FYSSQALGGHQNAHKRER+ A+R Q +KM             
Sbjct: 59  QEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFG 118

Query: 120 -------MTLLGLPIHNSMVR--SLGVQPHSLVHKP---GREDTAV 141
                   ++  LP+H S+    +LG+Q HS +HKP   GR+ T++
Sbjct: 119 HGSVSRFASMASLPLHGSVNNRSTLGIQAHSTIHKPSFLGRQTTSL 164

[Close]

BLAST of Clc05G12960 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.7e-10
Identity = 52/126 (41.27%), Postives = 67/126 (53.17%), Query Frame = 0


Query: 17  QDESNEEEEEEEEEEARDQPDGVGALEWLNLSLGRNKQLLTESQRSAASTKTFSCNFCKR 76
           QD  N+  E+EE    RD  +    L  ++  +     ++ ES  S    K FSCN+C+R
Sbjct: 15  QDSLNQSIEDEE----RDVHNSSHELNLID-CIDDTTSIVNESTTS-TEQKLFSCNYCQR 74

Query: 77  VFYSSQALGGHQNAHKRERSAARRHQAHKMMT--------LLGLPIHN--SMVRSLGVQP 133
            FYSSQALGGHQNAHKRER+ A+R Q                 LP H   +  RSLG+Q 
Sbjct: 75  TFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQA 134

[Close]

BLAST of Clc05G12960 vs. ExPASy Swiss-Prot
Match: Q9FFX4 (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.8e-08
Identity = 28/43 (65.12%), Postives = 33/43 (76.74%), Query Frame = 0


Query: 59  SQRSAASTKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRH 102
           S    AS + F C +C R FY+SQALGGHQNAHKRER+AARR+
Sbjct: 28  SSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRERAAARRN 70

[Close]

BLAST of Clc05G12960 vs. ExPASy TrEMBL
Match: A0A5A7T338 (Zinc finger protein 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001110 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.5e-94
Identity = 188/214 (87.85%), Postives = 192/214 (89.72%), Query Frame = 0


Query: 1   MIFQGEQIESLKENKGQDESNEEEEEEE---------EEEARDQPDGVGALEWLNLSLGR 60
           MIFQGEQIES KENKGQDESNEEEEEEE         EEEARDQPDGVGALEWL+LSLGR
Sbjct: 1   MIFQGEQIESFKENKGQDESNEEEEEEEEELDEEAELEEEARDQPDGVGALEWLSLSLGR 60

Query: 61  NKQLLTESQRSAASTKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLG 120
           NKQ L +SQRSAASTKTFSCNFCKR+FYSSQALGGHQNAHKRERSAARRHQAHKMMTLLG
Sbjct: 61  NKQPLNDSQRSAASTKTFSCNFCKRIFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLG 120

Query: 121 LPIHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKTGSW-APFMLRDAVDFMWPGSFR 180
           LPIHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVK GSW APFML DA DFMWPGSFR
Sbjct: 121 LPIHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKNGSWAAPFMLGDATDFMWPGSFR 180

Query: 181 FAQHQILPEPPPPPPPPQQEPPMESFKLDLNLRL 205
           FAQHQILPEPPPP     +EPPME FKLDLNLRL
Sbjct: 181 FAQHQILPEPPPP-----REPPMEPFKLDLNLRL 209

[Close]

BLAST of Clc05G12960 vs. ExPASy TrEMBL
Match: A0A1S3C410 (zinc finger protein 7-like OS=Cucumis melo OX=3656 GN=LOC103496238 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.5e-94
Identity = 188/214 (87.85%), Postives = 192/214 (89.72%), Query Frame = 0


Query: 1   MIFQGEQIESLKENKGQDESNEEEEEEE---------EEEARDQPDGVGALEWLNLSLGR 60
           MIFQGEQIES KENKGQDESNEEEEEEE         EEEARDQPDGVGALEWL+LSLGR
Sbjct: 1   MIFQGEQIESFKENKGQDESNEEEEEEEEELDEEAELEEEARDQPDGVGALEWLSLSLGR 60

Query: 61  NKQLLTESQRSAASTKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLG 120
           NKQ L +SQRSAASTKTFSCNFCKR+FYSSQALGGHQNAHKRERSAARRHQAHKMMTLLG
Sbjct: 61  NKQPLNDSQRSAASTKTFSCNFCKRIFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLG 120

Query: 121 LPIHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKTGSW-APFMLRDAVDFMWPGSFR 180
           LPIHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVK GSW APFML DA DFMWPGSFR
Sbjct: 121 LPIHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKNGSWAAPFMLGDATDFMWPGSFR 180

Query: 181 FAQHQILPEPPPPPPPPQQEPPMESFKLDLNLRL 205
           FAQHQILPEPPPP     +EPPME FKLDLNLRL
Sbjct: 181 FAQHQILPEPPPP-----REPPMEPFKLDLNLRL 209

[Close]

BLAST of Clc05G12960 vs. ExPASy TrEMBL
Match: A0A0A0L948 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G199020 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.0e-92
Identity = 185/210 (88.10%), Postives = 191/210 (90.95%), Query Frame = 0


Query: 1   MIFQGEQIESLKENKGQDESNEEE-----EEEEEEEARDQPDGVGALEWLNLSLGRNKQL 60
           MIFQGEQIES KENKGQDESNEEE     EE E EEARDQPDGVGALEWL+LSLGRNKQ 
Sbjct: 1   MIFQGEQIESFKENKGQDESNEEEEAELDEEAELEEARDQPDGVGALEWLSLSLGRNKQP 60

Query: 61  LTESQRSAASTKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLGLPIH 120
           L +SQRSAASTKTFSCNFCKR+FYSSQALGGHQNAHKRERSAARRHQAHKMMTLLGLPIH
Sbjct: 61  LNDSQRSAASTKTFSCNFCKRIFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLGLPIH 120

Query: 121 NSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKTGSW-APFMLRDAVDFMWPGSFRFAQH 180
           NSMVRSLGVQPHSLVHKPGREDTAVVARFNHVK GSW APFML DA+DFMWPGSFRFAQH
Sbjct: 121 NSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKNGSWAAPFMLGDAMDFMWPGSFRFAQH 180

Query: 181 QILPEPPPPPPPPQQEPPMESFKLDLNLRL 205
           QILPEPPPP     +EPPME FKLDL+LRL
Sbjct: 181 QILPEPPPP-----REPPMEPFKLDLSLRL 205

[Close]

BLAST of Clc05G12960 vs. ExPASy TrEMBL
Match: A0A6J1E569 (zinc finger protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111430693 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.1e-86
Identity = 173/206 (83.98%), Postives = 182/206 (88.35%), Query Frame = 0


Query: 1   MIFQGEQIESLKENKGQDES--NEEEEEEEEEEARDQPDGVGALEWLNLSLGRNKQLLTE 60
           MIFQGEQIESLKE KG++ES   EEEEEEEEEEA DQP+GVGALEWLNLSLGRNKQLLTE
Sbjct: 1   MIFQGEQIESLKEKKGENESVEEEEEEEEEEEEATDQPEGVGALEWLNLSLGRNKQLLTE 60

Query: 61  SQRSAASTKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLGLPIHNSM 120
           SQ SA S KTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQA +MMTLLGLPIHNSM
Sbjct: 61  SQSSAGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPIHNSM 120

Query: 121 VRSLGVQPHSLVHKPGREDTAVVARFNHVKTGSWAPFMLRDAVDFMWPGSFRFAQHQILP 180
           VRSLGVQPHSLVHK  REDTA+VARFNHVK+GSWAPFML DA+D  WPGSFRF QHQ+LP
Sbjct: 121 VRSLGVQPHSLVHKTSREDTAIVARFNHVKSGSWAPFMLGDAMDLRWPGSFRFTQHQVLP 180

Query: 181 EPPPPPPPPQQEPPMESFKLDLNLRL 205
           E      PP +EP ME FKLDLNLRL
Sbjct: 181 E-----SPPLREPQMEPFKLDLNLRL 201

[Close]

BLAST of Clc05G12960 vs. ExPASy TrEMBL
Match: A0A6J1J9Y6 (zinc finger protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111482624 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.3e-84
Identity = 170/207 (82.13%), Postives = 179/207 (86.47%), Query Frame = 0


Query: 1   MIFQGEQIESLKENKGQDES---NEEEEEEEEEEARDQPDGVGALEWLNLSLGRNKQLLT 60
           MIFQGEQIESLKE KG+DES    EEEEEEEEEEA DQP GVGALEWLNLSLGRNKQLL 
Sbjct: 1   MIFQGEQIESLKEKKGEDESVEEEEEEEEEEEEEATDQPAGVGALEWLNLSLGRNKQLLP 60

Query: 61  ESQRSAASTKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLGLPIHNS 120
           ESQ SA S KTFSCNFCKRVF+SSQALGGHQNAHKRERSAARRHQA +MMTLLGLP+HNS
Sbjct: 61  ESQSSAGSAKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPMHNS 120

Query: 121 MVRSLGVQPHSLVHKPGREDTAVVARFNHVKTGSWAPFMLRDAVDFMWPGSFRFAQHQIL 180
           MVRSLGVQPHSLVHK  REDTA+VARFNHVK+GSWAPFML  A+D  WPGSFRF QHQ+L
Sbjct: 121 MVRSLGVQPHSLVHKTSREDTAIVARFNHVKSGSWAPFMLGGAMDLRWPGSFRFTQHQVL 180

Query: 181 PEPPPPPPPPQQEPPMESFKLDLNLRL 205
           PE      PP +EP ME FKLDLNLRL
Sbjct: 181 PE-----SPPLREPQMEPFKLDLNLRL 202

[Close]

BLAST of Clc05G12960 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 89.0 bits (219), Expect = 4.9e-18
Identity = 57/154 (37.01%), Postives = 78/154 (50.65%), Query Frame = 0


Query: 58  ESQRSAASTKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQ--------------- 117
           + Q+ + S + FSCN+C+R FYSSQALGGHQNAHKRER+ A+R                 
Sbjct: 74  QQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSS 133

Query: 118 ----AHKMMTLLGLPIHNS------MVRSLGVQPHSLVHKPG----REDTAV--VARFNH 177
               A     L  LP+H S        R+LG++ HS  H         +T +  +ARFN 
Sbjct: 134 NYAAAATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARFNQ 193

Query: 178 VKTGSWAPFMLR-DAVDFMWPGSFRFAQHQILPE 180
              G+  PF +  D  + +WPGSFR A + +  E
Sbjct: 194 GYFGNCIPFYVEDDEAEMLWPGSFRQATNAVAVE 227

[Close]

BLAST of Clc05G12960 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 83.2 bits (204), Expect = 2.7e-16
Identity = 55/132 (41.67%), Postives = 73/132 (55.30%), Query Frame = 0


Query: 57  TESQRSAASTKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLGLPIHN 116
           T+S +  A+ + FSCN+C+R FYSSQALGGHQNAHKRER+ A+R      M       + 
Sbjct: 47  TKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYT 106

Query: 117 SMVRSLGVQPHS-LVHKPGREDTAVVARFNHV-KTGSWAPFML---RDAVDFMWPGSFRF 176
               SLG+Q HS L+H    +   +V+RF+H    G+  P          DF WPGSFR 
Sbjct: 107 YTSSSLGMQAHSGLLHHTLSQPQPLVSRFHHQGYFGNTVPLFFDYDDGGSDFFWPGSFR- 166

Query: 177 AQHQILPEPPPP 184
              Q++ E   P
Sbjct: 167 ---QVVEEAEAP 174

[Close]

BLAST of Clc05G12960 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 81.6 bits (200), Expect = 7.8e-16
Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 0


Query: 60  QRSAASTKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHKM------------- 119
           Q   A  + FSCN+C+R FYSSQALGGHQNAHKRER+ A+R Q +KM             
Sbjct: 59  QEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFG 118

Query: 120 -------MTLLGLPIHNSMVR--SLGVQPHSLVHKP---GREDTAV 141
                   ++  LP+H S+    +LG+Q HS +HKP   GR+ T++
Sbjct: 119 HGSVSRFASMASLPLHGSVNNRSTLGIQAHSTIHKPSFLGRQTTSL 164

[Close]

BLAST of Clc05G12960 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 3.9e-15
Identity = 51/137 (37.23%), Postives = 72/137 (52.55%), Query Frame = 0


Query: 55  LLTESQRSAAST--KTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLG- 114
           ++T S   + ST  K FSCN+C+R FYSSQALGGHQNAHKRER+ A+R Q        G 
Sbjct: 88  VVTPSFNGSTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGH 147

Query: 115 ------LPIHNSMV-RSLGVQPHSLVHKPGREDTAVVARFNHVKTGSWAPFMLRDAVDFM 174
                 +P H     R+LG+Q HS+ HKP   +      +  +   S  P + + A+  +
Sbjct: 148 PYGFAPVPFHGQYSNRTLGIQAHSMSHKPSSYN-VYGGEYGQI-NWSRIPLVQQPAIAKL 207

Query: 175 WPGSFRFAQHQILPEPP 182
                 +  HQ++  PP
Sbjct: 208 TSTENHYNHHQMMIAPP 222

[Close]

BLAST of Clc05G12960 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 66.6 bits (161), Expect = 2.6e-11
Identity = 52/126 (41.27%), Postives = 67/126 (53.17%), Query Frame = 0


Query: 17  QDESNEEEEEEEEEEARDQPDGVGALEWLNLSLGRNKQLLTESQRSAASTKTFSCNFCKR 76
           QD  N+  E+EE    RD  +    L  ++  +     ++ ES  S    K FSCN+C+R
Sbjct: 15  QDSLNQSIEDEE----RDVHNSSHELNLID-CIDDTTSIVNESTTS-TEQKLFSCNYCQR 74

Query: 77  VFYSSQALGGHQNAHKRERSAARRHQAHKMMT--------LLGLPIHN--SMVRSLGVQP 133
            FYSSQALGGHQNAHKRER+ A+R Q                 LP H   +  RSLG+Q 
Sbjct: 75  TFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQA 134

The following BLAST results are available for this feature:

BLAST of Clc05G12960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876126.1	2.7e-95	90.69	zinc finger protein 7-like [Benincasa hispida]	[more]
XP_008456235.1	5.1e-94	87.85	PREDICTED: zinc finger protein 7-like [Cucumis melo] >KAA0037198.1 zinc finger p...	[more]
XP_011651233.1	2.2e-92	88.10	zinc finger protein 7 [Cucumis sativus] >KGN57489.1 hypothetical protein Csa_010...	[more]
XP_022922826.1	2.3e-86	83.98	zinc finger protein 4-like [Cucurbita moschata]	[more]
XP_023551737.1	6.7e-86	84.31	zinc finger protein 4-like [Cucurbita pepo subsp. pepo] >KAG7014956.1 Zinc finge...	[more]

BLAST of Clc05G12960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39263	6.9e-17	37.01	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q39266	3.8e-15	41.67	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q42485	1.1e-14	43.40	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39262	3.7e-10	41.27	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
Q9FFX4	5.8e-08	65.12	Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1	[more]

BLAST of Clc05G12960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T338	2.5e-94	87.85	Zinc finger protein 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3C410	2.5e-94	87.85	zinc finger protein 7-like OS=Cucumis melo OX=3656 GN=LOC103496238 PE=4 SV=1	[more]
A0A0A0L948	1.0e-92	88.10	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G199020 P...	[more]
A0A6J1E569	1.1e-86	83.98	zinc finger protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111430693 PE=4 SV...	[more]
A0A6J1J9Y6	2.3e-84	82.13	zinc finger protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111482624 PE=4 SV=1	[more]

BLAST of Clc05G12960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G66140.1	4.9e-18	37.01	zinc finger protein 4	[more]
AT1G24625.1	2.7e-16	41.67	zinc finger protein 7	[more]
AT1G80730.1	7.8e-16	43.40	zinc-finger protein 1	[more]
AT5G10970.1	3.9e-15	37.23	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G25160.1	2.6e-11	41.27	zinc finger protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 8..35
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 48..110 e-value: 7.9E-8 score: 34.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..34
None	No IPR available	PANTHER	PTHR47593	ZINC FINGER PROTEIN 4-LIKE	coord: 1..204
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 71..91
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 69..96 score: 11.19825
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 66..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G12960.1	Clc05G12960.1	mRNA