Clc05G11640 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G11640
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	dof zinc finger protein DOF1.8-like
Location	ClcChr05: 9451294 .. 9452071 (+)
RNA-Seq Expression	Clc05G11640
Synteny	Clc05G11640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTGCTCACTGGCCTCAGGTATGGCTCATTGAACCCTTCTCTCTTTTTCTAGTCTCTCTCAATGATCAGTTCTTATAATCTATTTGAGTGTTCTTGTGATGAATATTGGGTGATGCAGGTTGAAGTTAAAAGCATGGAATTAGAAGAAGAGGGAATAAAGGCAGTTGTGGAAAGAAAAGCAAAGGCTAGGAAAGATCAAATATTGAACTGCCCAAGATGCAATTCCAACAACACAAAGTTCTGTTACTACAACAATTACAGCCTTTCACAGCCAAGATACTTCTGTAAGTCTTGTAGAAGATATTGGACAGCAGGTGGGTCTTTGAGGAACATTCCAGTAGGTGGGGCCTCCAGGAAGAACAAGAGACCTTCAGCTAATTTTTCATCACCTCCTTCAAAGAACAATCAAAAGAACTGTTATAACGATAACAACAATAATGGTGATGATGATGATCATCAAGGCATTTCCCAATTGAATATCAATACTACTTGTTCTTCAACTATTACTAATACTGCTACTTCTTGTTGTTGGCTGTCATCTGATGATCATATGAATAATCAAATAATGCTGAGAAGTAGTGGAATAATGTCTCAAAGGGAGCTGATTCCTTTTATTCCAATGCCTGCACCAGCTCCTCCACAGCCCAGTACTGCTGCTGCTCTGGAGGATTTCAAGCAACTTTCAACTATCATTTCTACTGATCAAAATGGAGCCAAATTGGGGGATGTTCCTGCCTTTTGGAATGGCATTTTTGGAGGAGGTTCATGGTGA

mRNA sequence

ATGGATTCTGCTCACTGGCCTCAGGTTGAAGTTAAAAGCATGGAATTAGAAGAAGAGGGAATAAAGGCAGTTGTGGAAAGAAAAGCAAAGGCTAGGAAAGATCAAATATTGAACTGCCCAAGATGCAATTCCAACAACACAAAGTTCTGTTACTACAACAATTACAGCCTTTCACAGCCAAGATACTTCTGTAAGTCTTGTAGAAGATATTGGACAGCAGGTGGGTCTTTGAGGAACATTCCAGTAGGTGGGGCCTCCAGGAAGAACAAGAGACCTTCAGCTAATTTTTCATCACCTCCTTCAAAGAACAATCAAAAGAACTGTTATAACGATAACAACAATAATGGTGATGATGATGATCATCAAGGCATTTCCCAATTGAATATCAATACTACTTGTTCTTCAACTATTACTAATACTGCTACTTCTTGTTGTTGGCTGTCATCTGATGATCATATGAATAATCAAATAATGCTGAGAAGTAGTGGAATAATGTCTCAAAGGGAGCTGATTCCTTTTATTCCAATGCCTGCACCAGCTCCTCCACAGCCCAGTACTGCTGCTGCTCTGGAGGATTTCAAGCAACTTTCAACTATCATTTCTACTGATCAAAATGGAGCCAAATTGGGGGATGTTCCTGCCTTTTGGAATGGCATTTTTGGAGGAGGTTCATGGTGA

Coding sequence (CDS)

ATGGATTCTGCTCACTGGCCTCAGGTTGAAGTTAAAAGCATGGAATTAGAAGAAGAGGGAATAAAGGCAGTTGTGGAAAGAAAAGCAAAGGCTAGGAAAGATCAAATATTGAACTGCCCAAGATGCAATTCCAACAACACAAAGTTCTGTTACTACAACAATTACAGCCTTTCACAGCCAAGATACTTCTGTAAGTCTTGTAGAAGATATTGGACAGCAGGTGGGTCTTTGAGGAACATTCCAGTAGGTGGGGCCTCCAGGAAGAACAAGAGACCTTCAGCTAATTTTTCATCACCTCCTTCAAAGAACAATCAAAAGAACTGTTATAACGATAACAACAATAATGGTGATGATGATGATCATCAAGGCATTTCCCAATTGAATATCAATACTACTTGTTCTTCAACTATTACTAATACTGCTACTTCTTGTTGTTGGCTGTCATCTGATGATCATATGAATAATCAAATAATGCTGAGAAGTAGTGGAATAATGTCTCAAAGGGAGCTGATTCCTTTTATTCCAATGCCTGCACCAGCTCCTCCACAGCCCAGTACTGCTGCTGCTCTGGAGGATTTCAAGCAACTTTCAACTATCATTTCTACTGATCAAAATGGAGCCAAATTGGGGGATGTTCCTGCCTTTTGGAATGGCATTTTTGGAGGAGGTTCATGGTGA

Protein sequence

MDSAHWPQVEVKSMELEEEGIKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSSPPSKNNQKNCYNDNNNNGDDDDHQGISQLNINTTCSSTITNTATSCCWLSSDDHMNNQIMLRSSGIMSQRELIPFIPMPAPAPPQPSTAAALEDFKQLSTIISTDQNGAKLGDVPAFWNGIFGGGSW

Homology

[Close]

BLAST of Clc05G11640 vs. NCBI nr
Match: XP_004146271.1 (dof zinc finger protein DOF1.8 [Cucumis sativus] >XP_011651310.1 dof zinc finger protein DOF1.8 [Cucumis sativus] >XP_011651312.1 dof zinc finger protein DOF1.8 [Cucumis sativus] >XP_031737984.1 dof zinc finger protein DOF1.8 [Cucumis sativus] >XP_031737985.1 dof zinc finger protein DOF1.8 [Cucumis sativus] >KGN57649.1 hypothetical protein Csa_011544 [Cucumis sativus])

HSP 1 Score: 396.7 bits (1018), Expect = 1.3e-106
Identity = 206/229 (89.96%), Postives = 213/229 (93.01%), Query Frame = 0


Query: 1   MDSAHWPQVEVKSMELEEEGIKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQP 60
           MDSAHWPQVEVK+MELEEEG+KAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQP
Sbjct: 1   MDSAHWPQVEVKNMELEEEGLKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQP 60

Query: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSSPPSKNNQKNCYNDNNNNGDDDD 120
           RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFS PPSKNNQKN     NN+G DDD
Sbjct: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSLPPSKNNQKN----YNNDGGDDD 120

Query: 121 HQGISQLNIN-TTCSS--TITNTATSCCWLSSD-DHMNNQIMLRSSGIMSQRELIPFIPM 180
            QGISQLNIN T+CSS  T TNTATSCCWLSSD DHMNNQIMLRS+GIMSQRELIPFIPM
Sbjct: 121 DQGISQLNINITSCSSTATTTNTATSCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPM 180

Query: 181 PAPAPPQPSTAAALEDFKQLSTIISTDQNGAKLGDVPAFWNGIFGGGSW 226
           PAPAPPQP+  AALEDFKQLSTIISTDQNGAKLGD PAFW+GIFGGGSW
Sbjct: 181 PAPAPPQPTAVAALEDFKQLSTIISTDQNGAKLGDAPAFWSGIFGGGSW 225

[Close]

BLAST of Clc05G11640 vs. NCBI nr
Match: XP_038895823.1 (dof zinc finger protein DOF4.6-like [Benincasa hispida])

HSP 1 Score: 392.9 bits (1008), Expect = 1.9e-105
Identity = 206/229 (89.96%), Postives = 211/229 (92.14%), Query Frame = 0


Query: 1   MDSAHWPQVEVKSMELEEEGIKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQP 60
           MDS+HWPQVEVK+MELEEEGIKAVVERK KARKDQILNCPRCNSNNTKFCYYNNYSL+QP
Sbjct: 1   MDSSHWPQVEVKNMELEEEGIKAVVERKEKARKDQILNCPRCNSNNTKFCYYNNYSLAQP 60

Query: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSSPPSKNNQKNCYNDNNNNGDDDD 120
           RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSSPPSKNNQK     N NNGDDDD
Sbjct: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSSPPSKNNQK-----NYNNGDDDD 120

Query: 121 HQGISQLNINTT-CSSTITNTATSCCWLSSDD-HMNNQIMLRSSGIMSQRELIPFIPMPA 180
           HQ ISQLNINTT CSST  NTATSCCWLSSDD H+NNQIMLRSSGIMSQRELIPFIPMP 
Sbjct: 121 HQDISQLNINTTSCSSTAANTATSCCWLSSDDTHVNNQIMLRSSGIMSQRELIPFIPMPT 180

Query: 181 PAPPQPSTAA-ALEDFKQLSTIISTDQN-GAKLGDVPAFWNGIFGGGSW 226
           PAP QP+ AA ALEDFKQLSTIISTDQN G KLGDVPAFWNGIFGGGSW
Sbjct: 181 PAPQQPTAAATALEDFKQLSTIISTDQNGGTKLGDVPAFWNGIFGGGSW 224

[Close]

BLAST of Clc05G11640 vs. NCBI nr
Match: XP_008455989.1 (PREDICTED: dof zinc finger protein DOF1.8-like [Cucumis melo] >KAA0050535.1 dof zinc finger protein DOF1.8-like [Cucumis melo var. makuwa] >TYK11276.1 dof zinc finger protein DOF1.8-like [Cucumis melo var. makuwa])

HSP 1 Score: 382.9 bits (982), Expect = 1.9e-102
Identity = 204/232 (87.93%), Postives = 211/232 (90.95%), Query Frame = 0


Query: 1   MDSAHWPQVEVKSMEL-EEEGIKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQ 60
           MDSAHWPQVEVK+M+L EEEGIKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQ
Sbjct: 1   MDSAHWPQVEVKNMDLEEEEGIKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQ 60

Query: 61  PRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSSPPSKNNQKNCYNDNNNNGDDD 120
           PRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFS PPSKNNQKN     NN G  D
Sbjct: 61  PRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSLPPSKNNQKN----YNNGGGGD 120

Query: 121 DHQGISQLNIN-TTCSS--TITNTATSCCWLSSD-DHMNNQIMLRSSGIMSQRELIPFIP 180
           D QGISQLNIN T+CSS  T TNTA +CCWLSSD DHMNNQIMLRS+GIMSQRELIPFIP
Sbjct: 121 DDQGISQLNINITSCSSTATTTNTAATCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIP 180

Query: 181 MPAPAPPQPS--TAAALEDFKQLSTIISTDQNGAKLGDVPAFWNGIFGGGSW 226
           MPAPAPPQP+  + AALEDFKQLSTIISTDQNGAKLGD PAFWNGIFGGGSW
Sbjct: 181 MPAPAPPQPTAVSVAALEDFKQLSTIISTDQNGAKLGDAPAFWNGIFGGGSW 228

[Close]

BLAST of Clc05G11640 vs. NCBI nr
Match: XP_023553431.1 (dof zinc finger protein DOF5.7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 319.7 bits (818), Expect = 2.0e-83
Identity = 179/243 (73.66%), Postives = 190/243 (78.19%), Query Frame = 0


Query: 1   MDSAHWPQVEVKSMELEEEGIKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQP 60
           MDSA WPQVEVKSMELEEEG KA +ERKAK  KDQILNCPRCNSNNTKFCYYNNYSLSQP
Sbjct: 1   MDSARWPQVEVKSMELEEEGRKAGLERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQP 60

Query: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKR-PSANFSSPPSKNNQKNCYNDNNNNGDDD 120
           RYFCKSCRRYWTAGGSLRNIPVGGASRKNKR PS NF SPP  NN+     D  +NGDDD
Sbjct: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNNK-----DYMSNGDDD 120

Query: 121 DHQGISQLNINTTCSSTITNTATSCCWLSSDDHMNNQIMLRSSGIMSQRELIPFIPMPAP 180
           D       NINT C S  TN AT  CWLSSDD MN+QIM+RSSGIMS RELIPFIPMPAP
Sbjct: 121 DQGNSQSSNINTPCPSA-TNIAT--CWLSSDD-MNDQIMVRSSGIMSPRELIPFIPMPAP 180

Query: 181 APPQPSTAAA----------------LEDFKQLSTIISTD-QNGAKLGDVPAFWNGIFGG 226
           APPQP+T+ +                +EDFKQL  IISTD QNGAKLG+VPAFWNGI+GG
Sbjct: 181 APPQPTTSTSTAPDACNPSTTLFSTTVEDFKQLPPIISTDHQNGAKLGEVPAFWNGIYGG 234

[Close]

BLAST of Clc05G11640 vs. NCBI nr
Match: XP_022923076.1 (dof zinc finger protein DOF5.7-like [Cucurbita moschata])

HSP 1 Score: 316.2 bits (809), Expect = 2.2e-82
Identity = 178/243 (73.25%), Postives = 189/243 (77.78%), Query Frame = 0


Query: 1   MDSAHWPQVEVKSMELEEEGIKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQP 60
           MDSA WPQVEVKSMELEEEG KA +ERKAK  KDQIL+CPRCNSNNTKFCYYNNYSLSQP
Sbjct: 1   MDSAGWPQVEVKSMELEEEGRKAGLERKAKPGKDQILSCPRCNSNNTKFCYYNNYSLSQP 60

Query: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKR-PSANFSSPPSKNNQKNCYNDNNNNGDDD 120
           RYFCKSCRRYWTAGGSLRNIPVGGASRKNKR PS NF SPP  NN+     D  +NGDDD
Sbjct: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNNK-----DYMSNGDDD 120

Query: 121 DHQGISQLNINTTCSSTITNTATSCCWLSSDDHMNNQIMLRSSGIMSQRELIPFIPMPAP 180
           D       NINT C S  TN AT  CWLSSDD MN+QIM+RSSGIMS RELIPFIPMPAP
Sbjct: 121 DQGNSQTSNINTPCPSA-TNIAT--CWLSSDD-MNDQIMVRSSGIMSPRELIPFIPMPAP 180

Query: 181 APPQPSTA----------------AALEDFKQLSTIISTD-QNGAKLGDVPAFWNGIFGG 226
           APPQP+T+                A +EDFKQL  IISTD QNG KLG+VPAFWNGI+GG
Sbjct: 181 APPQPTTSTITAPDACNPSTTLFTATVEDFKQLPPIISTDHQNGGKLGEVPAFWNGIYGG 234

[Close]

BLAST of Clc05G11640 vs. ExPASy Swiss-Prot
Match: Q84JQ8 (Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.6e-30
Identity = 77/128 (60.16%), Postives = 84/128 (65.62%), Query Frame = 0


Query: 1   MDSAHWPQ-VEVKSM-----------ELEEEGIKAVVERKAKARKDQILNCPRCNSNNTK 60
           MD+A WPQ   VK M           +         VERKA+  KDQ LNCPRCNS NTK
Sbjct: 1   MDTAKWPQEFVVKPMNEIVTNTCLKQQSNPPSPATPVERKARPEKDQALNCPRCNSLNTK 60

Query: 61  FCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSAN--FSSPPSKNNQK 115
           FCYYNNYSL+QPRYFCK CRRYWTAGGSLRNIPVGG  RKNKR S+N   SSP S ++ K
Sbjct: 61  FCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGGVRKNKRSSSNSSSSSPSSSSSSK 120

[Close]

BLAST of Clc05G11640 vs. ExPASy Swiss-Prot
Match: B9F1L8 (Dof zinc finger protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF2 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 4.3e-28
Identity = 56/76 (73.68%), Postives = 65/76 (85.53%), Query Frame = 0


Query: 20  GIKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRN 79
           G  A  ER+A+ +K++ LNCPRCNS NTKFCYYNNYSL QPRYFCK+CRRYWT GGSLRN
Sbjct: 63  GAGAGTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRN 122

Query: 80  IPVGGASRKNKRPSAN 96
           +PVGG SRKNKR S++
Sbjct: 123 VPVGGGSRKNKRSSSS 138

[Close]

BLAST of Clc05G11640 vs. ExPASy Swiss-Prot
Match: Q9SXG8 (Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 7.3e-28
Identity = 55/73 (75.34%), Postives = 65/73 (89.04%), Query Frame = 0


Query: 26  ERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGA 85
           ER+A+ +K++ LNCPRCNS NTKFCYYNNYSL QPRYFCK+CRRYWT GGSLRN+PVGG 
Sbjct: 67  ERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGG 126

Query: 86  SRKNKRPSANFSS 99
           SRKNKR S++ +S
Sbjct: 127 SRKNKRSSSSAAS 139

[Close]

BLAST of Clc05G11640 vs. ExPASy Swiss-Prot
Match: Q9ZPY0 (Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana OX=3702 GN=DOF2.5 PE=2 SV=3)

HSP 1 Score: 122.5 bits (306), Expect = 6.2e-27
Identity = 56/74 (75.68%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 25  VERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGG 84
           V  + KAR  + LNCPRCNS NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRN+PVGG
Sbjct: 68  VVAERKARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGG 127

Query: 85  ASRKNKRPSANFSS 99
           +SRKNKR S++ SS
Sbjct: 128 SSRKNKRSSSSSSS 141

[Close]

BLAST of Clc05G11640 vs. ExPASy Swiss-Prot
Match: Q43385 (Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 8.1e-27
Identity = 54/70 (77.14%), Postives = 60/70 (85.71%), Query Frame = 0


Query: 30  KARKDQILNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKN 89
           KAR  + +NCPRCNS NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRN+PVGG+SRKN
Sbjct: 67  KARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKN 126

Query: 90  KRPSANFSSP 100
           KR S   +SP
Sbjct: 127 KRSSTPLASP 136

[Close]

BLAST of Clc05G11640 vs. ExPASy TrEMBL
Match: A0A0A0L9J3 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G238150 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 6.3e-107
Identity = 206/229 (89.96%), Postives = 213/229 (93.01%), Query Frame = 0


Query: 1   MDSAHWPQVEVKSMELEEEGIKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQP 60
           MDSAHWPQVEVK+MELEEEG+KAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQP
Sbjct: 1   MDSAHWPQVEVKNMELEEEGLKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQP 60

Query: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSSPPSKNNQKNCYNDNNNNGDDDD 120
           RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFS PPSKNNQKN     NN+G DDD
Sbjct: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSLPPSKNNQKN----YNNDGGDDD 120

Query: 121 HQGISQLNIN-TTCSS--TITNTATSCCWLSSD-DHMNNQIMLRSSGIMSQRELIPFIPM 180
            QGISQLNIN T+CSS  T TNTATSCCWLSSD DHMNNQIMLRS+GIMSQRELIPFIPM
Sbjct: 121 DQGISQLNINITSCSSTATTTNTATSCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPM 180

Query: 181 PAPAPPQPSTAAALEDFKQLSTIISTDQNGAKLGDVPAFWNGIFGGGSW 226
           PAPAPPQP+  AALEDFKQLSTIISTDQNGAKLGD PAFW+GIFGGGSW
Sbjct: 181 PAPAPPQPTAVAALEDFKQLSTIISTDQNGAKLGDAPAFWSGIFGGGSW 225

[Close]

BLAST of Clc05G11640 vs. ExPASy TrEMBL
Match: A0A5D3CLI1 (Dof zinc finger protein DOF1.8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001330 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 9.4e-103
Identity = 204/232 (87.93%), Postives = 211/232 (90.95%), Query Frame = 0


Query: 1   MDSAHWPQVEVKSMEL-EEEGIKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQ 60
           MDSAHWPQVEVK+M+L EEEGIKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQ
Sbjct: 1   MDSAHWPQVEVKNMDLEEEEGIKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQ 60

Query: 61  PRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSSPPSKNNQKNCYNDNNNNGDDD 120
           PRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFS PPSKNNQKN     NN G  D
Sbjct: 61  PRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSLPPSKNNQKN----YNNGGGGD 120

Query: 121 DHQGISQLNIN-TTCSS--TITNTATSCCWLSSD-DHMNNQIMLRSSGIMSQRELIPFIP 180
           D QGISQLNIN T+CSS  T TNTA +CCWLSSD DHMNNQIMLRS+GIMSQRELIPFIP
Sbjct: 121 DDQGISQLNINITSCSSTATTTNTAATCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIP 180

Query: 181 MPAPAPPQPS--TAAALEDFKQLSTIISTDQNGAKLGDVPAFWNGIFGGGSW 226
           MPAPAPPQP+  + AALEDFKQLSTIISTDQNGAKLGD PAFWNGIFGGGSW
Sbjct: 181 MPAPAPPQPTAVSVAALEDFKQLSTIISTDQNGAKLGDAPAFWNGIFGGGSW 228

[Close]

BLAST of Clc05G11640 vs. ExPASy TrEMBL
Match: A0A1S3C3F2 (dof zinc finger protein DOF1.8-like OS=Cucumis melo OX=3656 GN=LOC103496053 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 9.4e-103
Identity = 204/232 (87.93%), Postives = 211/232 (90.95%), Query Frame = 0


Query: 1   MDSAHWPQVEVKSMEL-EEEGIKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQ 60
           MDSAHWPQVEVK+M+L EEEGIKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQ
Sbjct: 1   MDSAHWPQVEVKNMDLEEEEGIKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQ 60

Query: 61  PRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSSPPSKNNQKNCYNDNNNNGDDD 120
           PRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFS PPSKNNQKN     NN G  D
Sbjct: 61  PRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSLPPSKNNQKN----YNNGGGGD 120

Query: 121 DHQGISQLNIN-TTCSS--TITNTATSCCWLSSD-DHMNNQIMLRSSGIMSQRELIPFIP 180
           D QGISQLNIN T+CSS  T TNTA +CCWLSSD DHMNNQIMLRS+GIMSQRELIPFIP
Sbjct: 121 DDQGISQLNINITSCSSTATTTNTAATCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIP 180

Query: 181 MPAPAPPQPS--TAAALEDFKQLSTIISTDQNGAKLGDVPAFWNGIFGGGSW 226
           MPAPAPPQP+  + AALEDFKQLSTIISTDQNGAKLGD PAFWNGIFGGGSW
Sbjct: 181 MPAPAPPQPTAVSVAALEDFKQLSTIISTDQNGAKLGDAPAFWNGIFGGGSW 228

[Close]

BLAST of Clc05G11640 vs. ExPASy TrEMBL
Match: A0A6J1E5U7 (dof zinc finger protein DOF5.7-like OS=Cucurbita moschata OX=3662 GN=LOC111430855 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.1e-82
Identity = 178/243 (73.25%), Postives = 189/243 (77.78%), Query Frame = 0


Query: 1   MDSAHWPQVEVKSMELEEEGIKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQP 60
           MDSA WPQVEVKSMELEEEG KA +ERKAK  KDQIL+CPRCNSNNTKFCYYNNYSLSQP
Sbjct: 1   MDSAGWPQVEVKSMELEEEGRKAGLERKAKPGKDQILSCPRCNSNNTKFCYYNNYSLSQP 60

Query: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKR-PSANFSSPPSKNNQKNCYNDNNNNGDDD 120
           RYFCKSCRRYWTAGGSLRNIPVGGASRKNKR PS NF SPP  NN+     D  +NGDDD
Sbjct: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNNK-----DYMSNGDDD 120

Query: 121 DHQGISQLNINTTCSSTITNTATSCCWLSSDDHMNNQIMLRSSGIMSQRELIPFIPMPAP 180
           D       NINT C S  TN AT  CWLSSDD MN+QIM+RSSGIMS RELIPFIPMPAP
Sbjct: 121 DQGNSQTSNINTPCPSA-TNIAT--CWLSSDD-MNDQIMVRSSGIMSPRELIPFIPMPAP 180

Query: 181 APPQPSTA----------------AALEDFKQLSTIISTD-QNGAKLGDVPAFWNGIFGG 226
           APPQP+T+                A +EDFKQL  IISTD QNG KLG+VPAFWNGI+GG
Sbjct: 181 APPQPTTSTITAPDACNPSTTLFTATVEDFKQLPPIISTDHQNGGKLGEVPAFWNGIYGG 234

[Close]

BLAST of Clc05G11640 vs. ExPASy TrEMBL
Match: A0A6J1J8T6 (dof zinc finger protein DOF5.7-like OS=Cucurbita maxima OX=3661 GN=LOC111482784 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 4.1e-82
Identity = 176/243 (72.43%), Postives = 187/243 (76.95%), Query Frame = 0


Query: 1   MDSAHWPQVEVKSMELEEEGIKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQP 60
           MDSA WPQVEVKSMELEEEG +A +ERKAK  KDQILNCPRCNSNNTKFCYYNNYSLSQP
Sbjct: 1   MDSARWPQVEVKSMELEEEGRRAGLERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQP 60

Query: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKR-PSANFSSPPSKNNQKNCYNDNNNNGDDD 120
           RYFCKSCRRYWTAGGSLRNIPVGGASRKNKR PS NF SPP  NN+     D  +NGDDD
Sbjct: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNNK-----DYMSNGDDD 120

Query: 121 DHQGISQLNINTTCSSTITNTATSCCWLSSDDHMNNQIMLRSSGIMSQRELIPFIPMPAP 180
           D       NINT C S  TN AT  CWLS D  MN+QIM+RSSGIMS RELIPFIPMP P
Sbjct: 121 DQGNSQSSNINTPCPSA-TNIAT--CWLSCDG-MNDQIMVRSSGIMSPRELIPFIPMPVP 180

Query: 181 APPQPSTA----------------AALEDFKQLSTIISTD-QNGAKLGDVPAFWNGIFGG 226
           APPQP+T+                  +EDFKQL TIISTD QNGAKLG+VPAFWNGI+GG
Sbjct: 181 APPQPTTSTITAPDACNPSTTLFTTTVEDFKQLPTIISTDHQNGAKLGEVPAFWNGIYGG 234

[Close]

BLAST of Clc05G11640 vs. TAIR 10
Match: AT1G64620.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 132.9 bits (333), Expect = 3.3e-31
Identity = 77/128 (60.16%), Postives = 84/128 (65.62%), Query Frame = 0


Query: 1   MDSAHWPQ-VEVKSM-----------ELEEEGIKAVVERKAKARKDQILNCPRCNSNNTK 60
           MD+A WPQ   VK M           +         VERKA+  KDQ LNCPRCNS NTK
Sbjct: 1   MDTAKWPQEFVVKPMNEIVTNTCLKQQSNPPSPATPVERKARPEKDQALNCPRCNSLNTK 60

Query: 61  FCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSAN--FSSPPSKNNQK 115
           FCYYNNYSL+QPRYFCK CRRYWTAGGSLRNIPVGG  RKNKR S+N   SSP S ++ K
Sbjct: 61  FCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGGVRKNKRSSSNSSSSSPSSSSSSK 120

[Close]

BLAST of Clc05G11640 vs. TAIR 10
Match: AT2G46590.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 122.5 bits (306), Expect = 4.4e-28
Identity = 56/74 (75.68%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 25  VERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGG 84
           V  + KAR  + LNCPRCNS NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRN+PVGG
Sbjct: 56  VVAERKARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGG 115

Query: 85  ASRKNKRPSANFSS 99
           +SRKNKR S++ SS
Sbjct: 116 SSRKNKRSSSSSSS 129

[Close]

BLAST of Clc05G11640 vs. TAIR 10
Match: AT2G46590.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 122.5 bits (306), Expect = 4.4e-28
Identity = 56/74 (75.68%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 25  VERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGG 84
           V  + KAR  + LNCPRCNS NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRN+PVGG
Sbjct: 68  VVAERKARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGG 127

Query: 85  ASRKNKRPSANFSS 99
           +SRKNKR S++ SS
Sbjct: 128 SSRKNKRSSSSSSS 141

[Close]

BLAST of Clc05G11640 vs. TAIR 10
Match: AT3G61850.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 122.1 bits (305), Expect = 5.7e-28
Identity = 54/70 (77.14%), Postives = 60/70 (85.71%), Query Frame = 0


Query: 30  KARKDQILNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKN 89
           KAR  + +NCPRCNS NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRN+PVGG+SRKN
Sbjct: 67  KARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKN 126

Query: 90  KRPSANFSSP 100
           KR S   +SP
Sbjct: 127 KRSSTPLASP 136

[Close]

BLAST of Clc05G11640 vs. TAIR 10
Match: AT3G61850.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 122.1 bits (305), Expect = 5.7e-28
Identity = 54/70 (77.14%), Postives = 60/70 (85.71%), Query Frame = 0


Query: 30  KARKDQILNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKN 89
           KAR  + +NCPRCNS NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRN+PVGG+SRKN
Sbjct: 55  KARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKN 114

Query: 90  KRPSANFSSP 100
           KR S   +SP
Sbjct: 115 KRSSTPLASP 124

The following BLAST results are available for this feature:

BLAST of Clc05G11640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146271.1	1.3e-106	89.96	dof zinc finger protein DOF1.8 [Cucumis sativus] >XP_011651310.1 dof zinc finger...	[more]
XP_038895823.1	1.9e-105	89.96	dof zinc finger protein DOF4.6-like [Benincasa hispida]	[more]
XP_008455989.1	1.9e-102	87.93	PREDICTED: dof zinc finger protein DOF1.8-like [Cucumis melo] >KAA0050535.1 dof ...	[more]
XP_023553431.1	2.0e-83	73.66	dof zinc finger protein DOF5.7-like [Cucurbita pepo subsp. pepo]	[more]
XP_022923076.1	2.2e-82	73.25	dof zinc finger protein DOF5.7-like [Cucurbita moschata]	[more]

BLAST of Clc05G11640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JQ8	4.6e-30	60.16	Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV...	[more]
B9F1L8	4.3e-28	73.68	Dof zinc finger protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF2 PE=2 ...	[more]
Q9SXG8	7.3e-28	75.34	Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 ...	[more]
Q9ZPY0	6.2e-27	75.68	Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana OX=3702 GN=DOF2.5 PE=2 SV...	[more]
Q43385	8.1e-27	77.14	Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV...	[more]

BLAST of Clc05G11640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9J3	6.3e-107	89.96	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G238150 PE...	[more]
A0A5D3CLI1	9.4e-103	87.93	Dof zinc finger protein DOF1.8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3C3F2	9.4e-103	87.93	dof zinc finger protein DOF1.8-like OS=Cucumis melo OX=3656 GN=LOC103496053 PE=4...	[more]
A0A6J1E5U7	1.1e-82	73.25	dof zinc finger protein DOF5.7-like OS=Cucurbita moschata OX=3662 GN=LOC11143085...	[more]
A0A6J1J8T6	4.1e-82	72.43	dof zinc finger protein DOF5.7-like OS=Cucurbita maxima OX=3661 GN=LOC111482784 ...	[more]

BLAST of Clc05G11640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64620.1	3.3e-31	60.16	Dof-type zinc finger DNA-binding family protein	[more]
AT2G46590.1	4.4e-28	75.68	Dof-type zinc finger DNA-binding family protein	[more]
AT2G46590.2	4.4e-28	75.68	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.1	5.7e-28	77.14	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.2	5.7e-28	77.14	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 34..91 e-value: 2.0E-33 score: 114.3
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 39..75
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 37..91 score: 29.012367
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..123
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 22..178
None	No IPR available	PANTHER	PTHR31992:SF124	DOF ZINC FINGER PROTEIN DOF1.8	coord: 22..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G11640.1	Clc05G11640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding