Clc05G11460 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G11460
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Pentatricopeptide repeat-containing protein
Location	ClcChr05: 9332055 .. 9334358 (+)
RNA-Seq Expression	Clc05G11460
Synteny	Clc05G11460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACCTCCGTAAGTAACCCTTATCGTCACCCATAAGCGCCGAAACCCTTAATTCCTCACCGTCTCTCTGCATTCCGGCGAAATTTTTCGATGGCATTATCAAAGCCGGCCTTCTTCACGCACCTTAAAACCCTATCCGGGTCCCGCCATTTACTCCGGCGACAATCTCCGGTACTTCCCATCGTCACTCTCCGATTTCTCTCTTTTGCATCGCCGGAGGAAGCTGCCGCCGAACGACGCCGTCGAAAGCGCCGCCTCCGCATCGAACCCCCGCTCTCTTCCTCTTCTGCCGCTCGCCCACAATCGCAGCCTCCTAGACCTCAATCCCCACAAAACCCTAATGCCCCCAAACTCCCTGAGCATATCTCCGCCCTCTCTGGCAATCGTCTGAACCTTCACAACCGCATTCTCACTCTCATTCGTGAAAATGATCTTGAAGAAGCCGCGCTTTTCACTCGCCATTCCATTTACTCCAATTGTCGTCCCACCATCTTCACGGTCAATGCCGTTCTCAATGCACAGCTTCGCCAATCGAAATATGCCGATTTGCTTTCACTTCACCGGTTTATTACACAGGCTGGTGTCGCCCCCAATATAATGACTCATAATTTGATTCTTCAGACGTATTTGGATTGTCGTAAGCCTGATACGGCAATGGAACACTACAAGCAGTTGATCAATGATGCACCTTTCAACCCCTCGCCCACGACGTACAGGATCTTGATTAAAGGGTTGGTAGATAATAACAAGTTGGAGAGGGCAATGGAGCTTAAAGAGGAAATGACTGTGAAGGGTTTTGTTCCTGACCCTCTTATTTATCATTATCTGATGGTGGGATGTGTGAGAAGTTCAGATCCTGATGGAGTTTTTAAGCTTTTTGAAGAGTTGAAAGAGAAGTTGGGAGGGACTGTGGAAGATGGAGTTGTTTATGGGAGCTTGATGAAAGGGTATTTTATGAAAGGAATGGAAGAGGAAGCAATGAGGTGTTATGAGGAGACTGTGGGTGAAAATTCAGTGGTGAAGATGAGCGCCATTGCATACAATTCTGTGCTTGATGCATTATGCAGGAATGGGAAGTTTGGTGAGGCCTTGATGTTGTTTGATAGAATGACGAAGGAGCATAGTCCACCCAGGCGTCCGGCAGTGAACTTGGGAAGCTTTAATGTGATGGTTGATGGGTACTGCATTGAAGGGAGGTTCAAAGATGCCATGGAAGTATTCGAGAAGATGGGTGATTATAGGTGCAGCCCAGATACGTTGTCATTCAATAATTTGATCGAACAATTATGTAATAATGGAATGTTGCCTGAAGCTGAGAAGCTTTATGGAACAATGGGCGATAAGGGAGTGAACCCGGATGAGTTTACTTACGCTTTATTGATGGATTCTTGCTTTAAAGAGAATAGGGCAGATGATGCAGCTGGATATTTTAAAAAAATGGTAGAGTCTGGACTCAGACCCAATATAGCAGTTTATAATAGATTAGTGGATGAGTTGGTTAAATTAGGGAAGATTGAAGATGCAAAGTCTTTCTTCGACTTGATGGTGAAGAAGCTCAAAATGGATGCCTCAAGCTATCAGTTTATAATGAAGGCGTTAAGTGAATTGGGGAAACTGGATGAACTACTAAATGTGGTTGATACACTTCTGGATGATGATGGGATTGAATTTTCCGAAGAGCTGCAGGAGTTTGTCAGAGGTGAGCTGAGGAAGGAAGACAGGGAAGAAGATCTAGCTAAACTTGTGGAAGAGAAAGAAAGACTGAAAGCTGAAGCTAAGGCAAAGGAGGCTGAGGCAGCAGAGGCACAGAAGAGAAGTGCTAAAGCTGCTGTCTCTTCTCTACTGTCATCCAAGTTGTTCGGGAACAAGGAAGGTGAGAAAGAATCTGCAGTGAACGAAATGCAACCTGGTCAAGAAGACAGTGGTAAAGCCGAATTTGCGGAAGCTAGTCCTTGAAGAAGTTGCACAGTAGAGGGAAGAGTATTGAAGAACGAGCATTAAAATGTTTAGATATCAAAGATAAAATGATGCACACAACAGGTGAAAGCTTTACATCAGATTTCTATTATTTGTTGCTATCCACATGGGAATGTGAACCGCTTTCTGTTTCTGTTAACTTTCTATTATTATTGTTACATTACATGGGAATGTGGTCCGTTTTCTGGTTCTCTTAACCAATTAACCATGAGAAACTCGTACGGCAAAGAGAATTGATAAGATTATTTCTGCTTATATGTCCATAAACTAACCCTCTGTATCTTTACACCTGAAGTTGCAAGCAAGGATCCACAAAATCCTCTTATAA

mRNA sequence

AAACCTCCGTAAGTAACCCTTATCGTCACCCATAAGCGCCGAAACCCTTAATTCCTCACCGTCTCTCTGCATTCCGGCGAAATTTTTCGATGGCATTATCAAAGCCGGCCTTCTTCACGCACCTTAAAACCCTATCCGGGTCCCGCCATTTACTCCGGCGACAATCTCCGGTACTTCCCATCGTCACTCTCCGATTTCTCTCTTTTGCATCGCCGGAGGAAGCTGCCGCCGAACGACGCCGTCGAAAGCGCCGCCTCCGCATCGAACCCCCGCTCTCTTCCTCTTCTGCCGCTCGCCCACAATCGCAGCCTCCTAGACCTCAATCCCCACAAAACCCTAATGCCCCCAAACTCCCTGAGCATATCTCCGCCCTCTCTGGCAATCGTCTGAACCTTCACAACCGCATTCTCACTCTCATTCGTGAAAATGATCTTGAAGAAGCCGCGCTTTTCACTCGCCATTCCATTTACTCCAATTGTCGTCCCACCATCTTCACGGTCAATGCCGTTCTCAATGCACAGCTTCGCCAATCGAAATATGCCGATTTGCTTTCACTTCACCGGTTTATTACACAGGCTGGTGTCGCCCCCAATATAATGACTCATAATTTGATTCTTCAGACGTATTTGGATTGTCGTAAGCCTGATACGGCAATGGAACACTACAAGCAGTTGATCAATGATGCACCTTTCAACCCCTCGCCCACGACGTACAGGATCTTGATTAAAGGGTTGGTAGATAATAACAAGTTGGAGAGGGCAATGGAGCTTAAAGAGGAAATGACTGTGAAGGGTTTTGTTCCTGACCCTCTTATTTATCATTATCTGATGGTGGGATGTGTGAGAAGTTCAGATCCTGATGGAGTTTTTAAGCTTTTTGAAGAGTTGAAAGAGAAGTTGGGAGGGACTGTGGAAGATGGAGTTGTTTATGGGAGCTTGATGAAAGGGTATTTTATGAAAGGAATGGAAGAGGAAGCAATGAGGTGTTATGAGGAGACTGTGGGTGAAAATTCAGTGGTGAAGATGAGCGCCATTGCATACAATTCTGTGCTTGATGCATTATGCAGGAATGGGAAGTTTGGTGAGGCCTTGATGTTGTTTGATAGAATGACGAAGGAGCATAGTCCACCCAGGCGTCCGGCAGTGAACTTGGGAAGCTTTAATGTGATGGTTGATGGGTACTGCATTGAAGGGAGGTTCAAAGATGCCATGGAAGTATTCGAGAAGATGGGTGATTATAGGTGCAGCCCAGATACGTTGTCATTCAATAATTTGATCGAACAATTATGTAATAATGGAATGTTGCCTGAAGCTGAGAAGCTTTATGGAACAATGGGCGATAAGGGAGTGAACCCGGATGAGTTTACTTACGCTTTATTGATGGATTCTTGCTTTAAAGAGAATAGGGCAGATGATGCAGCTGGATATTTTAAAAAAATGGTAGAGTCTGGACTCAGACCCAATATAGCAGTTTATAATAGATTAGTGGATGAGTTGGTTAAATTAGGGAAGATTGAAGATGCAAAGTCTTTCTTCGACTTGATGGTGAAGAAGCTCAAAATGGATGCCTCAAGCTATCAGTTTATAATGAAGGCGTTAAGTGAATTGGGGAAACTGGATGAACTACTAAATGTGGTTGATACACTTCTGGATGATGATGGGATTGAATTTTCCGAAGAGCTGCAGGAGTTTGTCAGAGGTGAGCTGAGGAAGGAAGACAGGGAAGAAGATCTAGCTAAACTTGTGGAAGAGAAAGAAAGACTGAAAGCTGAAGCTAAGGCAAAGGAGGCTGAGGCAGCAGAGGCACAGAAGAGAAGTGCTAAAGCTGCTGTCTCTTCTCTACTGTCATCCAAGTTGTTCGGGAACAAGGAAGGTGAGAAAGAATCTGCAGTGAACGAAATGCAACCTGGTCAAGAAGACAGTGGTAAAGCCGAATTTGCGGAAGCTAGTCCTTGAAGAAGTTGCACAGTAGAGGGAAGAGTATTGAAGAACGAGCATTAAAATGTTTAGATATCAAAGATAAAATGATGCACACAACAGGTGAAAGCTTTACATCAGATTTCTATTATTTGTTGCTATCCACATGGGAATGTGAACCGCTTTCTGTTTCTGTTAACTTTCTATTATTATTGTTACATTACATGGGAATGTGGTCCGTTTTCTGGTTCTCTTAACCAATTAACCATGAGAAACTCGTACGGCAAAGAGAATTGATAAGATTATTTCTGCTTATATGTCCATAAACTAACCCTCTGTATCTTTACACCTGAAGTTGCAAGCAAGGATCCACAAAATCCTCTTATAA

Coding sequence (CDS)

ATGGCATTATCAAAGCCGGCCTTCTTCACGCACCTTAAAACCCTATCCGGGTCCCGCCATTTACTCCGGCGACAATCTCCGGTACTTCCCATCGTCACTCTCCGATTTCTCTCTTTTGCATCGCCGGAGGAAGCTGCCGCCGAACGACGCCGTCGAAAGCGCCGCCTCCGCATCGAACCCCCGCTCTCTTCCTCTTCTGCCGCTCGCCCACAATCGCAGCCTCCTAGACCTCAATCCCCACAAAACCCTAATGCCCCCAAACTCCCTGAGCATATCTCCGCCCTCTCTGGCAATCGTCTGAACCTTCACAACCGCATTCTCACTCTCATTCGTGAAAATGATCTTGAAGAAGCCGCGCTTTTCACTCGCCATTCCATTTACTCCAATTGTCGTCCCACCATCTTCACGGTCAATGCCGTTCTCAATGCACAGCTTCGCCAATCGAAATATGCCGATTTGCTTTCACTTCACCGGTTTATTACACAGGCTGGTGTCGCCCCCAATATAATGACTCATAATTTGATTCTTCAGACGTATTTGGATTGTCGTAAGCCTGATACGGCAATGGAACACTACAAGCAGTTGATCAATGATGCACCTTTCAACCCCTCGCCCACGACGTACAGGATCTTGATTAAAGGGTTGGTAGATAATAACAAGTTGGAGAGGGCAATGGAGCTTAAAGAGGAAATGACTGTGAAGGGTTTTGTTCCTGACCCTCTTATTTATCATTATCTGATGGTGGGATGTGTGAGAAGTTCAGATCCTGATGGAGTTTTTAAGCTTTTTGAAGAGTTGAAAGAGAAGTTGGGAGGGACTGTGGAAGATGGAGTTGTTTATGGGAGCTTGATGAAAGGGTATTTTATGAAAGGAATGGAAGAGGAAGCAATGAGGTGTTATGAGGAGACTGTGGGTGAAAATTCAGTGGTGAAGATGAGCGCCATTGCATACAATTCTGTGCTTGATGCATTATGCAGGAATGGGAAGTTTGGTGAGGCCTTGATGTTGTTTGATAGAATGACGAAGGAGCATAGTCCACCCAGGCGTCCGGCAGTGAACTTGGGAAGCTTTAATGTGATGGTTGATGGGTACTGCATTGAAGGGAGGTTCAAAGATGCCATGGAAGTATTCGAGAAGATGGGTGATTATAGGTGCAGCCCAGATACGTTGTCATTCAATAATTTGATCGAACAATTATGTAATAATGGAATGTTGCCTGAAGCTGAGAAGCTTTATGGAACAATGGGCGATAAGGGAGTGAACCCGGATGAGTTTACTTACGCTTTATTGATGGATTCTTGCTTTAAAGAGAATAGGGCAGATGATGCAGCTGGATATTTTAAAAAAATGGTAGAGTCTGGACTCAGACCCAATATAGCAGTTTATAATAGATTAGTGGATGAGTTGGTTAAATTAGGGAAGATTGAAGATGCAAAGTCTTTCTTCGACTTGATGGTGAAGAAGCTCAAAATGGATGCCTCAAGCTATCAGTTTATAATGAAGGCGTTAAGTGAATTGGGGAAACTGGATGAACTACTAAATGTGGTTGATACACTTCTGGATGATGATGGGATTGAATTTTCCGAAGAGCTGCAGGAGTTTGTCAGAGGTGAGCTGAGGAAGGAAGACAGGGAAGAAGATCTAGCTAAACTTGTGGAAGAGAAAGAAAGACTGAAAGCTGAAGCTAAGGCAAAGGAGGCTGAGGCAGCAGAGGCACAGAAGAGAAGTGCTAAAGCTGCTGTCTCTTCTCTACTGTCATCCAAGTTGTTCGGGAACAAGGAAGGTGAGAAAGAATCTGCAGTGAACGAAATGCAACCTGGTCAAGAAGACAGTGGTAAAGCCGAATTTGCGGAAGCTAGTCCTTGA

Protein sequence

MALSKPAFFTHLKTLSGSRHLLRRQSPVLPIVTLRFLSFASPEEAAAERRRRKRRLRIEPPLSSSSAARPQSQPPRPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVAPNIMTHNLILQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDPLIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKGMEEEAMRCYEETVGENSVVKMSAIAYNSVLDALCRNGKFGEALMLFDRMTKEHSPPRRPAVNLGSFNVMVDGYCIEGRFKDAMEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLPEAEKLYGTMGDKGVNPDEFTYALLMDSCFKENRADDAAGYFKKMVESGLRPNIAVYNRLVDELVKLGKIEDAKSFFDLMVKKLKMDASSYQFIMKALSELGKLDELLNVVDTLLDDDGIEFSEELQEFVRGELRKEDREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESAVNEMQPGQEDSGKAEFAEASP

Homology

[Close]

BLAST of Clc05G11460 vs. NCBI nr
Match: XP_038897801.1 (pentatricopeptide repeat-containing protein At3g49240, mitochondrial [Benincasa hispida])

HSP 1 Score: 1141.7 bits (2952), Expect = 0.0e+00
Identity = 591/622 (95.02%), Postives = 603/622 (96.95%), Query Frame = 0


Query: 1   MALSKPAFFTHLKTLSGSRHLLRRQSPVLPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60
           MALSKP+FFTHLKTLS S HLLRR++P LPIVTLRFLSFASPEEAAAERRRRKRRLRIEP
Sbjct: 1   MALSKPSFFTHLKTLSESHHLLRRKAPTLPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSAARPQSQPPRPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSAARPQSQPPRPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL
Sbjct: 61  PLSSSSAARPQSQPPRPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVAPNIMTHNLILQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVAPNI+THNLI QTYL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEM+VKGFVPDP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMSVKGFVPDP 240

Query: 241 LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKGMEEEAMRCY 300
           LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKGMEEEAMRCY
Sbjct: 241 LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKGMEEEAMRCY 300

Query: 301 EETVGENSVVKMSAIAYNSVLDALCRNGKFGEALMLFDRMTKEHSPPRRPAVNLGSFNVM 360
           EETVG+NSVVKMSAIAYNSVLDALCRNGKF EALMLFDRMTKEHSPPRR AVNLGSFNVM
Sbjct: 301 EETVGDNSVVKMSAIAYNSVLDALCRNGKFAEALMLFDRMTKEHSPPRRLAVNLGSFNVM 360

Query: 361 VDGYCIEGRFKDAMEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLPEAEKLYGTMGDKGV 420
           VDGYCIEGRFKDA++VFEKMGDYRCSPDTLSFNNLIEQLCNNGML EAEKLYGTMGDKGV
Sbjct: 361 VDGYCIEGRFKDAIDVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEKLYGTMGDKGV 420

Query: 421 NPDEFTYALLMDSCFKENRADDAAGYFKKMVESGLRPNIAVYNRLVDELVKLGKIEDAKS 480
           NPDEFTY LLMDSCFKENRADDAAGYF KMVESGLRPNIAVYNRLVDELVKLGKI +AKS
Sbjct: 421 NPDEFTYGLLMDSCFKENRADDAAGYFTKMVESGLRPNIAVYNRLVDELVKLGKINEAKS 480

Query: 481 FFDLMVKKLKMDASSYQFIMKALSELGKLDELLNVVDTLLDDDGIEFSEELQEFVRGELR 540
           FFDLMVKKLKMDA SYQFIMK LSE GKLDE+LNVVDTLLDDDGIEFSEELQEFVRGELR
Sbjct: 481 FFDLMVKKLKMDAPSYQFIMKVLSESGKLDEMLNVVDTLLDDDGIEFSEELQEFVRGELR 540

Query: 541 KEDREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNK-EGEKES 600
           KEDREEDLAKL+EEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNK EGEKES
Sbjct: 541 KEDREEDLAKLMEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEEGEKES 600

Query: 601 AVNEMQPGQEDSGKAEFAEASP 622
            VNEMQ GQEDSGK E A +SP
Sbjct: 601 VVNEMQSGQEDSGKTELAGSSP 622

[Close]

BLAST of Clc05G11460 vs. NCBI nr
Match: XP_023553006.1 (pentatricopeptide repeat-containing protein At3g49240, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1118.2 bits (2891), Expect = 0.0e+00
Identity = 577/621 (92.91%), Postives = 599/621 (96.46%), Query Frame = 0


Query: 1   MALSKPAFFTHLKTLSGSRHLLRRQSPVLPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60
           MALSKP FFTHLKTL+ S+HLL  Q+P  PIVTLRFLSFASPEEAAAERRRRKRRLRIEP
Sbjct: 1   MALSKPTFFTHLKTLTRSQHLL-HQAPAPPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSAARPQSQPPRPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSAARPQSQPP+PQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL
Sbjct: 61  PLSSSSAARPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVAPNIMTHNLILQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNA LRQSKY+DLLSLHRFITQAGVAPNI+THNLI QTYL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMT+KGFVPDP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPDP 240

Query: 241 LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKGMEEEAMRCY 300
           LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMK MEEEAMRCY
Sbjct: 241 LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCY 300

Query: 301 EETVGENSVVKMSAIAYNSVLDALCRNGKFGEALMLFDRMTKEHSPPRRPAVNLGSFNVM 360
           EETVG NSVVKMSAIAYNSVLDALC+NGKFGEALMLFDRMTKEHSPPRR AV+LGSFNVM
Sbjct: 301 EETVGANSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVM 360

Query: 361 VDGYCIEGRFKDAMEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLPEAEKLYGTMGDKGV 420
           VDGYCIEGRFKDA+EVFEKMGDYRCSPDTLSFNNLIEQLCNNGML EAE+LYGTMGDKGV
Sbjct: 361 VDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEELYGTMGDKGV 420

Query: 421 NPDEFTYALLMDSCFKENRADDAAGYFKKMVESGLRPNIAVYNRLVDELVKLGKIEDAKS 480
           NPDEFTY LLMDSCFK NR DDAAGYF+KMVESGLRPNIAVYNRLVDELVKLGKI +AK+
Sbjct: 421 NPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAKA 480

Query: 481 FFDLMVKKLKMDASSYQFIMKALSELGKLDELLNVVDTLLDDDGIEFSEELQEFVRGELR 540
           FFDLMVKKLKMDASSYQF+MKALSE G+LDE+LNVVDTLLDDDGIEFSEELQEFVRGELR
Sbjct: 481 FFDLMVKKLKMDASSYQFMMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGELR 540

Query: 541 KEDREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KE+RE DL KL+EEKER+KAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA
Sbjct: 541 KEEREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 VNEMQPGQEDSGKAEFAEASP 622
           VNEMQ GQEDSGK E AE++P
Sbjct: 601 VNEMQSGQEDSGKTELAESNP 620

[Close]

BLAST of Clc05G11460 vs. NCBI nr
Match: XP_022922766.1 (pentatricopeptide repeat-containing protein At3g49240, mitochondrial [Cucurbita moschata] >KAG7014704.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1117.8 bits (2890), Expect = 0.0e+00
Identity = 578/621 (93.08%), Postives = 598/621 (96.30%), Query Frame = 0


Query: 1   MALSKPAFFTHLKTLSGSRHLLRRQSPVLPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60
           MALSKP FFTHLKTL+ S+HLL  Q+P  PIVTLRFLSFASPEEAAAERRRRKRRLRIEP
Sbjct: 1   MALSKPTFFTHLKTLTRSQHLL-HQAPAPPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSAARPQSQPPRPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSAARPQSQPP+PQS QNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL
Sbjct: 61  PLSSSSAARPQSQPPKPQSTQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVAPNIMTHNLILQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNA LRQSKY+DLLSLHRFITQAGVAPNI+THNLI QTYL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMT KGFVPDP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTTKGFVPDP 240

Query: 241 LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKGMEEEAMRCY 300
           LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMK MEEEAMRCY
Sbjct: 241 LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCY 300

Query: 301 EETVGENSVVKMSAIAYNSVLDALCRNGKFGEALMLFDRMTKEHSPPRRPAVNLGSFNVM 360
           EETVG NSVVKMSAIAYNSVLDALC+NGKFGEALMLFDRMTKEHSPPRR AV+LGSFNVM
Sbjct: 301 EETVGANSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVM 360

Query: 361 VDGYCIEGRFKDAMEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLPEAEKLYGTMGDKGV 420
           VDGYCIEGRFKDA+EVFEKMGDYRCSPDTLSFNNLIEQLCNNGML EAE+LYGTMGDKGV
Sbjct: 361 VDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEELYGTMGDKGV 420

Query: 421 NPDEFTYALLMDSCFKENRADDAAGYFKKMVESGLRPNIAVYNRLVDELVKLGKIEDAKS 480
           NPDEFTY LLMDSCFK NRADDAAGYF+KMVESGLRPNIAVYNRLVDELVKLGKI +AK+
Sbjct: 421 NPDEFTYGLLMDSCFKANRADDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAKA 480

Query: 481 FFDLMVKKLKMDASSYQFIMKALSELGKLDELLNVVDTLLDDDGIEFSEELQEFVRGELR 540
           FFDLMVKKLKMDASSYQFIMKALSE G+LDE+LNVVDTLLDDDGIEFSEELQEFVRGELR
Sbjct: 481 FFDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGELR 540

Query: 541 KEDREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KE+RE DL KL+EEKER+KAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA
Sbjct: 541 KEEREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 VNEMQPGQEDSGKAEFAEASP 622
           VNEMQ GQEDSGK E AE++P
Sbjct: 601 VNEMQSGQEDSGKTELAESNP 620

[Close]

BLAST of Clc05G11460 vs. NCBI nr
Match: KAG6576653.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1114.4 bits (2881), Expect = 0.0e+00
Identity = 576/621 (92.75%), Postives = 597/621 (96.14%), Query Frame = 0


Query: 1   MALSKPAFFTHLKTLSGSRHLLRRQSPVLPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60
           MALSKP FFTHLKTL+ S+HLL  Q+P  PIVTLRFLSFASPEEAAAERRRRKRRLRIEP
Sbjct: 1   MALSKPTFFTHLKTLTRSQHLL-HQAPAPPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSAARPQSQPPRPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSAARPQSQPP+PQS QNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL
Sbjct: 61  PLSSSSAARPQSQPPKPQSTQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVAPNIMTHNLILQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNA LRQSKY+DLLSLHRFITQAGVAPNI+THNLI QTYL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMT KGFVPDP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTTKGFVPDP 240

Query: 241 LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKGMEEEAMRCY 300
           LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMK MEEEAMRCY
Sbjct: 241 LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCY 300

Query: 301 EETVGENSVVKMSAIAYNSVLDALCRNGKFGEALMLFDRMTKEHSPPRRPAVNLGSFNVM 360
           EETVG NSVVKMSAIAYNSVLDALC+NGKFGEALMLFDRMTKEHSPPRR AV+LGSFNVM
Sbjct: 301 EETVGANSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVM 360

Query: 361 VDGYCIEGRFKDAMEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLPEAEKLYGTMGDKGV 420
           VDGYCIEGRFKDA+EVFEKMGDYRCSPDTLSFNNLIEQLCNNGML EAE+LYGTMGDKGV
Sbjct: 361 VDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEELYGTMGDKGV 420

Query: 421 NPDEFTYALLMDSCFKENRADDAAGYFKKMVESGLRPNIAVYNRLVDELVKLGKIEDAKS 480
           NPDEFTY LLMDSCFK NR DDAAGYF+KMVESGLRPNIAVYNRLVDELVKLGKI +AK+
Sbjct: 421 NPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAKA 480

Query: 481 FFDLMVKKLKMDASSYQFIMKALSELGKLDELLNVVDTLLDDDGIEFSEELQEFVRGELR 540
           FFDLMVKKLKMDASSYQFIMKALSE G+LD++LNVVDTLLDDDGIEFSEELQEFVRGELR
Sbjct: 481 FFDLMVKKLKMDASSYQFIMKALSESGQLDKMLNVVDTLLDDDGIEFSEELQEFVRGELR 540

Query: 541 KEDREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KE+RE DL KL+EEKER+KAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA
Sbjct: 541 KEEREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 VNEMQPGQEDSGKAEFAEASP 622
           VNEMQ GQEDSGK E AE++P
Sbjct: 601 VNEMQSGQEDSGKTELAESNP 620

[Close]

BLAST of Clc05G11460 vs. NCBI nr
Match: XP_022984619.1 (pentatricopeptide repeat-containing protein At3g49240, mitochondrial [Cucurbita maxima])

HSP 1 Score: 1110.9 bits (2872), Expect = 0.0e+00
Identity = 575/621 (92.59%), Postives = 597/621 (96.14%), Query Frame = 0


Query: 1   MALSKPAFFTHLKTLSGSRHLLRRQSPVLPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60
           MALSKP FFTHL+TL+ S+HLL  Q+P  PIVTLRFLSFASPEEAAAERRRRKRRLRIEP
Sbjct: 1   MALSKPTFFTHLRTLTRSQHLL-HQAPAPPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSAARPQSQPPRPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSAARPQSQP +PQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL
Sbjct: 61  PLSSSSAARPQSQPSKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVAPNIMTHNLILQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNA LRQSKY+DLLSLHRFITQAGVAPNI+THNLI QTYL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMT+KGFVPDP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPDP 240

Query: 241 LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKGMEEEAMRCY 300
           LIY YLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMK MEEEAMRCY
Sbjct: 241 LIYLYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCY 300

Query: 301 EETVGENSVVKMSAIAYNSVLDALCRNGKFGEALMLFDRMTKEHSPPRRPAVNLGSFNVM 360
           EETVG NSVVKMSAIAYNSVLDALC+NGKFGEALMLFDRMTKEHSPPRR AV+LGSFNVM
Sbjct: 301 EETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVM 360

Query: 361 VDGYCIEGRFKDAMEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLPEAEKLYGTMGDKGV 420
           VDGYCIEGRFKDA+EVFEKMGDYRCSPDTLSFNNLIEQLCNNGML +AE+LYGTMGDKGV
Sbjct: 361 VDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLADAEELYGTMGDKGV 420

Query: 421 NPDEFTYALLMDSCFKENRADDAAGYFKKMVESGLRPNIAVYNRLVDELVKLGKIEDAKS 480
           NPDEFTY LLMDSCFK NR DDAAGYF+KMVESGLRPNIAVYNRLVDELVKLGKI +AK+
Sbjct: 421 NPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAKA 480

Query: 481 FFDLMVKKLKMDASSYQFIMKALSELGKLDELLNVVDTLLDDDGIEFSEELQEFVRGELR 540
           FFDLMVKKLKMDASSYQFIMKALSE G+LDE+LNVVDTLLDDDGIEFSEELQEFVRGELR
Sbjct: 481 FFDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGELR 540

Query: 541 KEDREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KEDRE DL KL+EEKER+KAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA
Sbjct: 541 KEDREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 VNEMQPGQEDSGKAEFAEASP 622
           VNEMQ GQEDSGK E AE++P
Sbjct: 601 VNEMQSGQEDSGKTELAESNP 620

[Close]

BLAST of Clc05G11460 vs. ExPASy Swiss-Prot
Match: Q9M3A8 (Pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=EMB1796 PE=1 SV=1)

HSP 1 Score: 766.1 bits (1977), Expect = 2.9e-220
Identity = 402/626 (64.22%), Postives = 492/626 (78.59%), Query Frame = 0


Query: 1   MALSKPAFFTHLKTLSGS-RHLLRRQSPVLPIVTLRFLSFASPEEAAAERRRRKRRLRIE 60
           M++SK AF  HL+TLS S RH +  Q    P + +R++SFA+ EEAAAERRRRKRRLR+E
Sbjct: 1   MSISKAAFLNHLQTLSRSYRHRVLPQ----PFLAVRYMSFATQEEAAAERRRRKRRLRME 60

Query: 61  PPLSS-SSAARPQSQPPRPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEA 120
           PP++S + + + QSQ PRP   QNPN PKLPE +SAL G RL+LHN IL LIRENDLEEA
Sbjct: 61  PPVNSFNRSQQQQSQIPRP--IQNPNIPKLPESVSALVGKRLDLHNHILKLIRENDLEEA 120

Query: 121 ALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVAPNIMTHNLILQT 180
           AL+TRHS+YSNCRPTIFTVN VL AQLRQ+KY  LL LH FI QAG+APNI+T+NLI Q 
Sbjct: 121 ALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQA 180

Query: 181 YLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTVKGFVP 240
           YLD RKP+ A+EHYK  I++AP NPS  T+RIL+KGLV N+ LE+AME+KE+M VKGFV 
Sbjct: 181 YLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVV 240

Query: 241 DPLIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKGMEEEAMR 300
           DP++Y YLM+GCV++SD DGV KL++ELKEKLGG V+DGVVYG LMKGYFMK ME+EAM 
Sbjct: 241 DPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAME 300

Query: 301 CYEETVGENSVVKMSAIAYNSVLDALCRNGKFGEALMLFDRMTKEHSPPRRPAVNLGSFN 360
           CYEE VGENS V+MSA+AYN VL+AL  NGKF EAL LFD + KEH+PPR  AVNLG+FN
Sbjct: 301 CYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFN 360

Query: 361 VMVDGYCIEGRFKDAMEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLPEAEKLYGTMGDK 420
           VMV+GYC  G+F++AMEVF +MGD++CSPDTLSFNNL+ QLC+N +L EAEKLYG M +K
Sbjct: 361 VMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEK 420

Query: 421 GVNPDEFTYALLMDSCFKENRADDAAGYFKKMVESGLRPNIAVYNRLVDELVKLGKIEDA 480
            V PDE+TY LLMD+CFKE + D+ A Y+K MVES LRPN+AVYNRL D+L+K GK++DA
Sbjct: 421 NVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDA 480

Query: 481 KSFFDLMVKKLKMDASSYQFIMKALSELGKLDELLNVVDTLLDDDGIEFSEELQEFVRGE 540
           KSFFD+MV KLKMD  +Y+FIM+ALSE G+LDE+L +VD +LDDD +  SEELQEFV+ E
Sbjct: 481 KSFFDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEE 540

Query: 541 LRKEDREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKE---- 600
           LRK  RE DL KL+EEKERLKAEAKAKE   AE +K++    +++L+  K    K+    
Sbjct: 541 LRKGGREGDLEKLMEEKERLKAEAKAKELADAEEKKKAQSINIAALIPPKAVEEKKETAK 600

Query: 601 --------GEKESAVNEMQPGQEDSG 613
                   G +E+ V EM  G E  G
Sbjct: 601 LLWENEAGGVEEADVVEMAKGVEAGG 620

[Close]

BLAST of Clc05G11460 vs. ExPASy Swiss-Prot
Match: Q9SY69 (Pentatricopeptide repeat-containing protein At1g10270 OS=Arabidopsis thaliana OX=3702 GN=GRP23 PE=1 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.1e-80
Identity = 188/534 (35.21%), Postives = 296/534 (55.43%), Query Frame = 0


Query: 30  PIVTLRFLSFASPEEAAAERRRRKRRLRIEPPLSSSSAARPQSQPPRPQSPQNPNAPKLP 89
           P +  R ++F+S EEAAAERRRRKRRLRIEPPL +      +  P  P   ++PNAP+LP
Sbjct: 81  PPIPHRTMAFSSAEEAAAERRRRKRRLRIEPPLHAL-----RRDPSAPPPKRDPNAPRLP 140

Query: 90  EHISALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSK 149
           +  SAL G RLNLHNR+ +LIR +DL+ A+   R S++SN RPT+FT NA++ A  R  +
Sbjct: 141 DSTSALVGQRLNLHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKR 200

Query: 150 YADLLSLHR-FITQAGVAPNIMTHNLILQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTY 209
           Y++ +SL + F  Q+ + PN++++N I+  + D    D A+E Y+ ++ +APF PS  TY
Sbjct: 201 YSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTY 260

Query: 210 RILIKGLVDNNKLERAMELKEEMTVKGFVPDPLIYHYLMVGCVRSSDPDGVFKLFEELKE 269
           R L KGLV   ++  A  L  EM  KG   D  +Y+ L+ G +   D D   + F+ELK 
Sbjct: 261 RHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKS 320

Query: 270 KLGGTVEDGVVYGSLMKGYFMKGMEEEAMRCYEETVGENSVVKMSAIAYNSVLDALCRNG 329
           K   TV DG+V  + M+ +F KG ++EAM  Y   + +    +M     N +L+   + G
Sbjct: 321 KC--TVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKK--FRMHPPTGNVLLEVFLKFG 380

Query: 330 KFGEALMLFDRMTKEHSPPRRPAVNLGSFNVMVDGYCIEGRFKDAMEVFEKMGDYRCSP- 389
           K  EA  LF+ M   H+PP   +VN  +  +MV+     G F +A+  F+K+G    S  
Sbjct: 381 KKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKP 440

Query: 390 ---DTLSFNNLIEQLCNNGMLPEAEKLYGTMGDKGVNPDEFTYALLMDSCFKENRADDAA 449
              D L + N++ + C  GML EAE+ +     + +  D  ++  ++D+  K  R DDA 
Sbjct: 441 FVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAV 500

Query: 450 GYFKKMVESGLRPNIAVYNRLVDELVKLGKI-EDAKSFFDLMVKKLKMDASSYQFIMKAL 509
               +MV+  LR       R+  EL+K GK+ E A+    +  ++ K D S Y  +++ L
Sbjct: 501 KMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGL 560

Query: 510 SELGKLDELLNVVDTLLDDDGIEFSEELQEFVRGELRKEDREEDLAKLVEEKER 558
            +   LD+  ++V  ++  + +  +  L+EF+     K  R E++ K++    R
Sbjct: 561 CDGDALDQAKDIVGEMIRHN-VGVTTVLREFIIEVFEKAGRREEIEKILNSVAR 604

[Close]

BLAST of Clc05G11460 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.6e-43
Identity = 106/413 (25.67%), Postives = 201/413 (48.67%), Query Frame = 0


Query: 103 HNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQ 162
           +N +  ++R  +LEE   F  + +Y    P I     ++    R  K      +   +  
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165

Query: 163 AGVAPNIMTHNLILQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLE 222
           +G  P+++T+N+++  Y    + + A+     +++    +P   TY  +++ L D+ KL+
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNAL----SVLDRMSVSPDVVTYNTILRSLCDSGKLK 225

Query: 223 RAMELKEEMTVKGFVPDPLIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGS 282
           +AME+ + M  +   PD + Y  L+    R S      KL +E++++  G   D V Y  
Sbjct: 226 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR--GCTPDVVTYNV 285

Query: 283 LMKGYFMKGMEEEAMRCYEETVGENSVVKMSAIAYNSVLDALCRNGKFGEA-LMLFDRMT 342
           L+ G   +G  +EA++   +    +S  + + I +N +L ++C  G++ +A  +L D + 
Sbjct: 286 LVNGICKEGRLDEAIKFLNDM--PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 345

Query: 343 KEHSPPRRPAVNLGSFNVMVDGYCIEGRFKDAMEVFEKMGDYRCSPDTLSFNNLIEQLCN 402
           K  SP      ++ +FN++++  C +G    A+++ EKM  + C P++LS+N L+   C 
Sbjct: 346 KGFSP------SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 405

Query: 403 NGMLPEAEKLYGTMGDKGVNPDEFTYALLMDSCFKENRADDAAGYFKKMVESGLRPNIAV 462
              +  A +    M  +G  PD  TY  ++ +  K+ + +DA     ++   G  P +  
Sbjct: 406 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 465

Query: 463 YNRLVDELVKLGKIEDAKSFFDLM-VKKLKMDASSYQFIMKALSELGKLDELL 514
           YN ++D L K GK   A    D M  K LK D  +Y  ++  LS  GK+DE +
Sbjct: 466 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504

[Close]

BLAST of Clc05G11460 vs. ExPASy Swiss-Prot
Match: Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 2.2e-42
Identity = 112/419 (26.73%), Postives = 201/419 (47.97%), Query Frame = 0


Query: 93  SALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYAD 152
           SA S   L+   R+ + + +   ++A    R  I+S   PT+   + + +A  +  +Y  
Sbjct: 47  SAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDL 106

Query: 153 LLSLHRFITQAGVAPNIMTHNLILQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILI 212
           +L+L + +   G+A N+ T ++++  +  CRK   A     ++I    + P+  T+  LI
Sbjct: 107 VLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIK-LGYEPNTITFSTLI 166

Query: 213 KGLVDNNKLERAMELKEEMTVKGFVPDPLIYHYLMVGCVRSSDPDGVFKLFEELKEKLGG 272
            GL    ++  A+EL + M   G  PD +  + L+ G   S        L +++ E   G
Sbjct: 167 NGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY--G 226

Query: 273 TVEDGVVYGSLMKGYFMKGMEEEAMRCYEETVGENSVVKMSAIAYNSVLDALCRNGKFGE 332
              + V YG ++      G    AM    +    N  +K+ A+ Y+ ++D LC++G    
Sbjct: 227 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN--IKLDAVKYSIIIDGLCKHGSLDN 286

Query: 333 ALMLFDRMTKEHSPPRRPAVNLGSFNVMVDGYCIEGRFKDAMEVFEKMGDYRCSPDTLSF 392
           A  LF+ M       +    N+ ++N+++ G+C  GR+ D  ++   M   + +P+ ++F
Sbjct: 287 AFNLFNEMEM-----KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 346

Query: 393 NNLIEQLCNNGMLPEAEKLYGTMGDKGVNPDEFTYALLMDSCFKENRADDAAGYFKKMVE 452
           + LI+     G L EAE+L+  M  +G+ PD  TY  L+D   KEN  D A      MV 
Sbjct: 347 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 406

Query: 453 SGLRPNIAVYNRLVDELVKLGKIEDAKSFFDLM-VKKLKMDASSYQFIMKALSELGKLD 511
            G  PNI  +N L++   K  +I+D    F  M ++ +  D  +Y  +++   ELGKL+
Sbjct: 407 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455

[Close]

BLAST of Clc05G11460 vs. ExPASy Swiss-Prot
Match: Q9ASZ8 (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX=3702 GN=At1g12620 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 3.5e-40
Identity = 118/451 (26.16%), Postives = 209/451 (46.34%), Query Frame = 0


Query: 109 LIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVAPN 168
           L  E  + EA       +    +PT+ T+NA++N      K +D + L   + + G  PN
Sbjct: 152 LCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211

Query: 169 IMTHNLILQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELK 228
            +T+  +L+      +   AME  +++  +         Y I+I GL  +  L+ A  L 
Sbjct: 212 EVTYGPVLKVMCKSGQTALAMELLRKM-EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 271

Query: 229 EEMTVKGFVPDPLIYHYLMVG-CVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGY 288
            EM +KGF  D +IY  L+ G C      DG   L + +K K+     D V + +L+  +
Sbjct: 272 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI---TPDVVAFSALIDCF 331

Query: 289 FMKGMEEEAMRCYEETVGENSVVKMSAIAYNSVLDALCRNGKFGEALMLFDRMTKEHSPP 348
             +G   EA   ++E +     +    + Y S++D  C+  +  +A  + D M  +   P
Sbjct: 332 VKEGKLREAEELHKEMIQRG--ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 391

Query: 349 RRPAVNLGSFNVMVDGYCIEGRFKDAMEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLPE 408
                N+ +FN++++GYC      D +E+F KM       DT+++N LI+  C  G L  
Sbjct: 392 -----NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 451

Query: 409 AEKLYGTMGDKGVNPDEFTYALLMDSCFKENRADDAAGYFKKMVESGLRPNIAVYNRLVD 468
           A++L+  M  + V PD  +Y +L+D        + A   F+K+ +S +  +I +YN ++ 
Sbjct: 452 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 511

Query: 469 ELVKLGKIEDAKSFF-DLMVKKLKMDASSYQFIMKALSELGKLDELLNVVDTLLDDDGIE 528
            +    K++DA   F  L +K +K D  +Y  ++  L + G L E   +   + +D    
Sbjct: 512 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 571

Query: 529 FSEELQEFVRGELRKEDREEDLAKLVEEKER 558
                   +R  L + D  +  AKL+EE +R
Sbjct: 572 NGCTYNILIRAHLGEGDATKS-AKLIEEIKR 590

[Close]

BLAST of Clc05G11460 vs. ExPASy TrEMBL
Match: A0A6J1E509 (pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111430665 PE=4 SV=1)

HSP 1 Score: 1117.8 bits (2890), Expect = 0.0e+00
Identity = 578/621 (93.08%), Postives = 598/621 (96.30%), Query Frame = 0


Query: 1   MALSKPAFFTHLKTLSGSRHLLRRQSPVLPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60
           MALSKP FFTHLKTL+ S+HLL  Q+P  PIVTLRFLSFASPEEAAAERRRRKRRLRIEP
Sbjct: 1   MALSKPTFFTHLKTLTRSQHLL-HQAPAPPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSAARPQSQPPRPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSAARPQSQPP+PQS QNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL
Sbjct: 61  PLSSSSAARPQSQPPKPQSTQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVAPNIMTHNLILQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNA LRQSKY+DLLSLHRFITQAGVAPNI+THNLI QTYL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMT KGFVPDP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTTKGFVPDP 240

Query: 241 LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKGMEEEAMRCY 300
           LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMK MEEEAMRCY
Sbjct: 241 LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCY 300

Query: 301 EETVGENSVVKMSAIAYNSVLDALCRNGKFGEALMLFDRMTKEHSPPRRPAVNLGSFNVM 360
           EETVG NSVVKMSAIAYNSVLDALC+NGKFGEALMLFDRMTKEHSPPRR AV+LGSFNVM
Sbjct: 301 EETVGANSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVM 360

Query: 361 VDGYCIEGRFKDAMEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLPEAEKLYGTMGDKGV 420
           VDGYCIEGRFKDA+EVFEKMGDYRCSPDTLSFNNLIEQLCNNGML EAE+LYGTMGDKGV
Sbjct: 361 VDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEELYGTMGDKGV 420

Query: 421 NPDEFTYALLMDSCFKENRADDAAGYFKKMVESGLRPNIAVYNRLVDELVKLGKIEDAKS 480
           NPDEFTY LLMDSCFK NRADDAAGYF+KMVESGLRPNIAVYNRLVDELVKLGKI +AK+
Sbjct: 421 NPDEFTYGLLMDSCFKANRADDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAKA 480

Query: 481 FFDLMVKKLKMDASSYQFIMKALSELGKLDELLNVVDTLLDDDGIEFSEELQEFVRGELR 540
           FFDLMVKKLKMDASSYQFIMKALSE G+LDE+LNVVDTLLDDDGIEFSEELQEFVRGELR
Sbjct: 481 FFDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGELR 540

Query: 541 KEDREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KE+RE DL KL+EEKER+KAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA
Sbjct: 541 KEEREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 VNEMQPGQEDSGKAEFAEASP 622
           VNEMQ GQEDSGK E AE++P
Sbjct: 601 VNEMQSGQEDSGKTELAESNP 620

[Close]

BLAST of Clc05G11460 vs. ExPASy TrEMBL
Match: A0A6J1JB23 (pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111482852 PE=4 SV=1)

HSP 1 Score: 1110.9 bits (2872), Expect = 0.0e+00
Identity = 575/621 (92.59%), Postives = 597/621 (96.14%), Query Frame = 0


Query: 1   MALSKPAFFTHLKTLSGSRHLLRRQSPVLPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60
           MALSKP FFTHL+TL+ S+HLL  Q+P  PIVTLRFLSFASPEEAAAERRRRKRRLRIEP
Sbjct: 1   MALSKPTFFTHLRTLTRSQHLL-HQAPAPPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSAARPQSQPPRPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSAARPQSQP +PQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL
Sbjct: 61  PLSSSSAARPQSQPSKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVAPNIMTHNLILQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNA LRQSKY+DLLSLHRFITQAGVAPNI+THNLI QTYL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMT+KGFVPDP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPDP 240

Query: 241 LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKGMEEEAMRCY 300
           LIY YLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMK MEEEAMRCY
Sbjct: 241 LIYLYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCY 300

Query: 301 EETVGENSVVKMSAIAYNSVLDALCRNGKFGEALMLFDRMTKEHSPPRRPAVNLGSFNVM 360
           EETVG NSVVKMSAIAYNSVLDALC+NGKFGEALMLFDRMTKEHSPPRR AV+LGSFNVM
Sbjct: 301 EETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVM 360

Query: 361 VDGYCIEGRFKDAMEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLPEAEKLYGTMGDKGV 420
           VDGYCIEGRFKDA+EVFEKMGDYRCSPDTLSFNNLIEQLCNNGML +AE+LYGTMGDKGV
Sbjct: 361 VDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLADAEELYGTMGDKGV 420

Query: 421 NPDEFTYALLMDSCFKENRADDAAGYFKKMVESGLRPNIAVYNRLVDELVKLGKIEDAKS 480
           NPDEFTY LLMDSCFK NR DDAAGYF+KMVESGLRPNIAVYNRLVDELVKLGKI +AK+
Sbjct: 421 NPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAKA 480

Query: 481 FFDLMVKKLKMDASSYQFIMKALSELGKLDELLNVVDTLLDDDGIEFSEELQEFVRGELR 540
           FFDLMVKKLKMDASSYQFIMKALSE G+LDE+LNVVDTLLDDDGIEFSEELQEFVRGELR
Sbjct: 481 FFDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGELR 540

Query: 541 KEDREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KEDRE DL KL+EEKER+KAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA
Sbjct: 541 KEDREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 VNEMQPGQEDSGKAEFAEASP 622
           VNEMQ GQEDSGK E AE++P
Sbjct: 601 VNEMQSGQEDSGKTELAESNP 620

[Close]

BLAST of Clc05G11460 vs. ExPASy TrEMBL
Match: A0A0A0L7B2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239860 PE=4 SV=1)

HSP 1 Score: 1081.2 bits (2795), Expect = 0.0e+00
Identity = 563/624 (90.22%), Postives = 586/624 (93.91%), Query Frame = 0


Query: 1   MALSKPAFFTHLKTLSGSRHLLRRQS-PVLPIVTLRFLSFASPEEAAAERRRRKRRLRIE 60
           MALSKPAFFTHLKTL+GS HLL+RQ+    PIVTLRFLSFAS EEA AERRRRKRRLRIE
Sbjct: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASAEEADAERRRRKRRLRIE 60

Query: 61  PPLSSSSAARPQSQPPRPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
           PPLSSSSAARP +QPPR Q+PQNPNAPK+PEHISALSGNRLNLHNRILTLIRENDLEEAA
Sbjct: 61  PPLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVAPNIMTHNLILQTY 180
           LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGV PNI+THNLI QTY
Sbjct: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPD 240
           LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELK+EM  KGF PD
Sbjct: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPD 240

Query: 241 PLIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKGMEEEAMRC 300
           PLIYHYLM GCVRS DPDGVFKLFEELKEKLG TVEDGVVYG+LMKGYFMK MEEEAM+C
Sbjct: 241 PLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKC 300

Query: 301 YEETVGENSVVKMSAIAYNSVLDALCRNGKFGEALMLFDRMTKEHSPPRRPAVNLGSFNV 360
           YEETVG+NSVVKMSAIAYNSVLDALCRNGKFGEAL LFDRMTKEH PPR  AVNLGSFNV
Sbjct: 301 YEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGSFNV 360

Query: 361 MVDGYCIEGRFKDAMEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLPEAEKLYGTMGDKG 420
           MVDGYCIEGRFK+A+EVFEKMGDYRC PDTLSFNNLIEQLCNNGML EAE LYGTM DKG
Sbjct: 361 MVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGTMDDKG 420

Query: 421 VNPDEFTYALLMDSCFKENRADDAAGYFKKMVESGLRPNIAVYNRLVDELVKLGKIEDAK 480
           VNPDEFTY LLMDSCFK+NRADDAA YF+KMV+SGLRPNIAVYN LVDELVKLGKI+DAK
Sbjct: 421 VNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGKIDDAK 480

Query: 481 SFFDLMVKKLKMDASSYQFIMKALSELGKLDELLNVVDTLLDDDGIEFSEELQEFVRGEL 540
           SFFDLMVKKLKMDASSYQFIMKALSE GK+DE+LNVVDTLLDDDGIEFSEELQEFVRGEL
Sbjct: 481 SFFDLMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGEL 540

Query: 541 RKEDREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKES 600
           RKE+REEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLF NKEGEKES
Sbjct: 541 RKENREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFANKEGEKES 600

Query: 601 AVNEMQ--PGQEDSGKAEFAEASP 622
            VNEMQ    ++DSGK E AE+SP
Sbjct: 601 VVNEMQSVEQEDDSGKTELAESSP 624

[Close]

BLAST of Clc05G11460 vs. ExPASy TrEMBL
Match: A0A6J1CK90 (pentatricopeptide repeat-containing protein At3g49240 OS=Momordica charantia OX=3673 GN=LOC111011752 PE=4 SV=1)

HSP 1 Score: 1075.5 bits (2780), Expect = 0.0e+00
Identity = 558/631 (88.43%), Postives = 587/631 (93.03%), Query Frame = 0


Query: 1   MALSKPAFFTHLKTLSGSRHLLRRQSPVLPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60
           MA+SKP FFTHLK L+GS  LLR Q+P    VTLRFLSFASPEEAAAERRRRKRRLRIEP
Sbjct: 1   MAVSKPTFFTHLKALTGSHRLLRYQAPAPLSVTLRFLSFASPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSAARPQSQPPRPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSA RPQSQPP+PQSPQNPNAPKLPEHISALSGNRL LHNRILTLIR+NDLEEAAL
Sbjct: 61  PLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLTLHNRILTLIRQNDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVAPNIMTHNLILQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNAQLRQSKY+DLLSLHRFITQAGVAPNI+THNLI QTYL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFN SPTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNASPTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP 240

Query: 241 LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKGMEEEAMRCY 300
           +IYHYLMVGCVR+SD DGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKGMEEEAMRCY
Sbjct: 241 IIYHYLMVGCVRNSDHDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKGMEEEAMRCY 300

Query: 301 EETVGENSVVKMSAIAYNSVLDALCRNGKFGEALMLFDRMTKEHSPPRRPAVNLGSFNVM 360
           EE VG NSVVKMSAIAYNSVLDALC++GKFGEALMLFDRM KEHSPPR  AVNLGSFNVM
Sbjct: 301 EENVGVNSVVKMSAIAYNSVLDALCKHGKFGEALMLFDRMIKEHSPPRHLAVNLGSFNVM 360

Query: 361 VDGYCIEGRFKDAMEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLPEAEKLYGTMGDKGV 420
           VDGYC EGRF+DA+E+F+KMGDYRCS DTLSFNNLIEQLC NGML EAE+LY TMGDKGV
Sbjct: 361 VDGYCTEGRFQDAIEIFKKMGDYRCSTDTLSFNNLIEQLCKNGMLTEAEELYATMGDKGV 420

Query: 421 NPDEFTYALLMDSCFKENRADDAAGYFKKMVESGLRPNIAVYNRLVDELVKLGKIEDAKS 480
           +PDEFTY LLMDSCFKENR+DDAAGYF+KMVESGLRPNIAVYNRLVDELVKLGKI++AKS
Sbjct: 421 SPDEFTYGLLMDSCFKENRSDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKIDEAKS 480

Query: 481 FFDLMVKKLKMDASSYQFIMKALSELGKLDELLNVVDTLLDDDGIEFSEELQEFVRGELR 540
           FFDLMVKKLKMDASSYQFIMKALSE GKLDE+LNVVDTLLDDDGIEF+EELQEFVRG+LR
Sbjct: 481 FFDLMVKKLKMDASSYQFIMKALSESGKLDEVLNVVDTLLDDDGIEFTEELQEFVRGQLR 540

Query: 541 KEDREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKES- 600
           KE+RE DLAKL+EEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKES 
Sbjct: 541 KEEREGDLAKLMEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 ----------AVNEMQPGQEDSGKAEFAEAS 621
                     AVN+ QPGQE SG  E  E++
Sbjct: 601 EGSGDAAQAAAVNDTQPGQEASGNTELEESN 631

[Close]

BLAST of Clc05G11460 vs. ExPASy TrEMBL
Match: A0A5A7UA91 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001470 PE=4 SV=1)

HSP 1 Score: 1072.8 bits (2773), Expect = 4.6e-310
Identity = 555/624 (88.94%), Postives = 585/624 (93.75%), Query Frame = 0


Query: 1   MALSKPAFFTHLKTLSGSRHLLRRQSPV-LPIVTLRFLSFASPEEAAAERRRRKRRLRIE 60
           MALSKPAFFTHLKTL+GS HLL+RQ+P  LPIVT RFLSFAS EEA AERRRRKRRLRIE
Sbjct: 1   MALSKPAFFTHLKTLTGSHHLLQRQAPAPLPIVTFRFLSFASAEEADAERRRRKRRLRIE 60

Query: 61  PPLSSSSAARPQSQPPRPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
           PPLSSSSAARPQSQP R Q+PQNPN PK+PEHISALSGNRLNLHNRILTLIRENDLEEAA
Sbjct: 61  PPLSSSSAARPQSQPSRSQTPQNPNTPKVPEHISALSGNRLNLHNRILTLIRENDLEEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVAPNIMTHNLILQTY 180
           LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGV PNI+THNLI QTY
Sbjct: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPD 240
           LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDN KLERAMELKEEM VKGF PD
Sbjct: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNKKLERAMELKEEMIVKGFAPD 240

Query: 241 PLIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKGMEEEAMRC 300
           PLIYHYLM GCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYG+LMKGYFMK MEEEAM+C
Sbjct: 241 PLIYHYLMAGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGNLMKGYFMKEMEEEAMKC 300

Query: 301 YEETVGENSVVKMSAIAYNSVLDALCRNGKFGEALMLFDRMTKEHSPPRRPAVNLGSFNV 360
           YEETVG+N VVKMSAIAYNSVLDALC++GKF EAL LFDRMTKEH PPR  AVNLG+FNV
Sbjct: 301 YEETVGDNPVVKMSAIAYNSVLDALCKHGKFSEALTLFDRMTKEHRPPRHLAVNLGTFNV 360

Query: 361 MVDGYCIEGRFKDAMEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLPEAEKLYGTMGDKG 420
           MVDGYCI+GRFK+A+ VFE+MGDYRCSPDTLSFNNLIEQLCNNGML EAE LYGTMG+KG
Sbjct: 361 MVDGYCIKGRFKEAIGVFEEMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEMLYGTMGEKG 420

Query: 421 VNPDEFTYALLMDSCFKENRADDAAGYFKKMVESGLRPNIAVYNRLVDELVKLGKIEDAK 480
           VNPDEFTY LLM SCF++NRADDAA YF+KMV+SGLRPNIAVYN LV ELVKLGK+++AK
Sbjct: 421 VNPDEFTYGLLMHSCFQKNRADDAAAYFRKMVDSGLRPNIAVYNILVGELVKLGKVDEAK 480

Query: 481 SFFDLMVKKLKMDASSYQFIMKALSELGKLDELLNVVDTLLDDDGIEFSEELQEFVRGEL 540
           SFFDLMVKKLKMDAS+YQFIMKALSE GK+DE+LNVVDTLLDDDGIEFSEELQEFVRGEL
Sbjct: 481 SFFDLMVKKLKMDASNYQFIMKALSESGKMDEVLNVVDTLLDDDGIEFSEELQEFVRGEL 540

Query: 541 RKEDREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKES 600
           RKEDREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLF NKEGEKES
Sbjct: 541 RKEDREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFANKEGEKES 600

Query: 601 AVNEMQPGQ--EDSGKAEFAEASP 622
            VNEMQ GQ  +D GK E AE++P
Sbjct: 601 VVNEMQSGQQEDDGGKTELAESNP 624

[Close]

BLAST of Clc05G11460 vs. TAIR 10
Match: AT3G49240.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 766.1 bits (1977), Expect = 2.1e-221
Identity = 402/626 (64.22%), Postives = 492/626 (78.59%), Query Frame = 0


Query: 1   MALSKPAFFTHLKTLSGS-RHLLRRQSPVLPIVTLRFLSFASPEEAAAERRRRKRRLRIE 60
           M++SK AF  HL+TLS S RH +  Q    P + +R++SFA+ EEAAAERRRRKRRLR+E
Sbjct: 1   MSISKAAFLNHLQTLSRSYRHRVLPQ----PFLAVRYMSFATQEEAAAERRRRKRRLRME 60

Query: 61  PPLSS-SSAARPQSQPPRPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEA 120
           PP++S + + + QSQ PRP   QNPN PKLPE +SAL G RL+LHN IL LIRENDLEEA
Sbjct: 61  PPVNSFNRSQQQQSQIPRP--IQNPNIPKLPESVSALVGKRLDLHNHILKLIRENDLEEA 120

Query: 121 ALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVAPNIMTHNLILQT 180
           AL+TRHS+YSNCRPTIFTVN VL AQLRQ+KY  LL LH FI QAG+APNI+T+NLI Q 
Sbjct: 121 ALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQA 180

Query: 181 YLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTVKGFVP 240
           YLD RKP+ A+EHYK  I++AP NPS  T+RIL+KGLV N+ LE+AME+KE+M VKGFV 
Sbjct: 181 YLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVV 240

Query: 241 DPLIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKGMEEEAMR 300
           DP++Y YLM+GCV++SD DGV KL++ELKEKLGG V+DGVVYG LMKGYFMK ME+EAM 
Sbjct: 241 DPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAME 300

Query: 301 CYEETVGENSVVKMSAIAYNSVLDALCRNGKFGEALMLFDRMTKEHSPPRRPAVNLGSFN 360
           CYEE VGENS V+MSA+AYN VL+AL  NGKF EAL LFD + KEH+PPR  AVNLG+FN
Sbjct: 301 CYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFN 360

Query: 361 VMVDGYCIEGRFKDAMEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLPEAEKLYGTMGDK 420
           VMV+GYC  G+F++AMEVF +MGD++CSPDTLSFNNL+ QLC+N +L EAEKLYG M +K
Sbjct: 361 VMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEK 420

Query: 421 GVNPDEFTYALLMDSCFKENRADDAAGYFKKMVESGLRPNIAVYNRLVDELVKLGKIEDA 480
            V PDE+TY LLMD+CFKE + D+ A Y+K MVES LRPN+AVYNRL D+L+K GK++DA
Sbjct: 421 NVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDA 480

Query: 481 KSFFDLMVKKLKMDASSYQFIMKALSELGKLDELLNVVDTLLDDDGIEFSEELQEFVRGE 540
           KSFFD+MV KLKMD  +Y+FIM+ALSE G+LDE+L +VD +LDDD +  SEELQEFV+ E
Sbjct: 481 KSFFDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEE 540

Query: 541 LRKEDREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKE---- 600
           LRK  RE DL KL+EEKERLKAEAKAKE   AE +K++    +++L+  K    K+    
Sbjct: 541 LRKGGREGDLEKLMEEKERLKAEAKAKELADAEEKKKAQSINIAALIPPKAVEEKKETAK 600

Query: 601 --------GEKESAVNEMQPGQEDSG 613
                   G +E+ V EM  G E  G
Sbjct: 601 LLWENEAGGVEEADVVEMAKGVEAGG 620

[Close]

BLAST of Clc05G11460 vs. TAIR 10
Match: AT1G10270.1 (glutamine-rich protein 23 )

HSP 1 Score: 301.6 bits (771), Expect = 1.5e-81
Identity = 188/534 (35.21%), Postives = 296/534 (55.43%), Query Frame = 0


Query: 30  PIVTLRFLSFASPEEAAAERRRRKRRLRIEPPLSSSSAARPQSQPPRPQSPQNPNAPKLP 89
           P +  R ++F+S EEAAAERRRRKRRLRIEPPL +      +  P  P   ++PNAP+LP
Sbjct: 81  PPIPHRTMAFSSAEEAAAERRRRKRRLRIEPPLHAL-----RRDPSAPPPKRDPNAPRLP 140

Query: 90  EHISALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSK 149
           +  SAL G RLNLHNR+ +LIR +DL+ A+   R S++SN RPT+FT NA++ A  R  +
Sbjct: 141 DSTSALVGQRLNLHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKR 200

Query: 150 YADLLSLHR-FITQAGVAPNIMTHNLILQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTY 209
           Y++ +SL + F  Q+ + PN++++N I+  + D    D A+E Y+ ++ +APF PS  TY
Sbjct: 201 YSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTY 260

Query: 210 RILIKGLVDNNKLERAMELKEEMTVKGFVPDPLIYHYLMVGCVRSSDPDGVFKLFEELKE 269
           R L KGLV   ++  A  L  EM  KG   D  +Y+ L+ G +   D D   + F+ELK 
Sbjct: 261 RHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKS 320

Query: 270 KLGGTVEDGVVYGSLMKGYFMKGMEEEAMRCYEETVGENSVVKMSAIAYNSVLDALCRNG 329
           K   TV DG+V  + M+ +F KG ++EAM  Y   + +    +M     N +L+   + G
Sbjct: 321 KC--TVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKK--FRMHPPTGNVLLEVFLKFG 380

Query: 330 KFGEALMLFDRMTKEHSPPRRPAVNLGSFNVMVDGYCIEGRFKDAMEVFEKMGDYRCSP- 389
           K  EA  LF+ M   H+PP   +VN  +  +MV+     G F +A+  F+K+G    S  
Sbjct: 381 KKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKP 440

Query: 390 ---DTLSFNNLIEQLCNNGMLPEAEKLYGTMGDKGVNPDEFTYALLMDSCFKENRADDAA 449
              D L + N++ + C  GML EAE+ +     + +  D  ++  ++D+  K  R DDA 
Sbjct: 441 FVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAV 500

Query: 450 GYFKKMVESGLRPNIAVYNRLVDELVKLGKI-EDAKSFFDLMVKKLKMDASSYQFIMKAL 509
               +MV+  LR       R+  EL+K GK+ E A+    +  ++ K D S Y  +++ L
Sbjct: 501 KMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGL 560

Query: 510 SELGKLDELLNVVDTLLDDDGIEFSEELQEFVRGELRKEDREEDLAKLVEEKER 558
            +   LD+  ++V  ++  + +  +  L+EF+     K  R E++ K++    R
Sbjct: 561 CDGDALDQAKDIVGEMIRHN-VGVTTVLREFIIEVFEKAGRREEIEKILNSVAR 604

[Close]

BLAST of Clc05G11460 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 178.3 bits (451), Expect = 1.9e-44
Identity = 106/413 (25.67%), Postives = 201/413 (48.67%), Query Frame = 0


Query: 103 HNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQ 162
           +N +  ++R  +LEE   F  + +Y    P I     ++    R  K      +   +  
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165

Query: 163 AGVAPNIMTHNLILQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLE 222
           +G  P+++T+N+++  Y    + + A+     +++    +P   TY  +++ L D+ KL+
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNAL----SVLDRMSVSPDVVTYNTILRSLCDSGKLK 225

Query: 223 RAMELKEEMTVKGFVPDPLIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGS 282
           +AME+ + M  +   PD + Y  L+    R S      KL +E++++  G   D V Y  
Sbjct: 226 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR--GCTPDVVTYNV 285

Query: 283 LMKGYFMKGMEEEAMRCYEETVGENSVVKMSAIAYNSVLDALCRNGKFGEA-LMLFDRMT 342
           L+ G   +G  +EA++   +    +S  + + I +N +L ++C  G++ +A  +L D + 
Sbjct: 286 LVNGICKEGRLDEAIKFLNDM--PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 345

Query: 343 KEHSPPRRPAVNLGSFNVMVDGYCIEGRFKDAMEVFEKMGDYRCSPDTLSFNNLIEQLCN 402
           K  SP      ++ +FN++++  C +G    A+++ EKM  + C P++LS+N L+   C 
Sbjct: 346 KGFSP------SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 405

Query: 403 NGMLPEAEKLYGTMGDKGVNPDEFTYALLMDSCFKENRADDAAGYFKKMVESGLRPNIAV 462
              +  A +    M  +G  PD  TY  ++ +  K+ + +DA     ++   G  P +  
Sbjct: 406 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 465

Query: 463 YNRLVDELVKLGKIEDAKSFFDLM-VKKLKMDASSYQFIMKALSELGKLDELL 514
           YN ++D L K GK   A    D M  K LK D  +Y  ++  LS  GK+DE +
Sbjct: 466 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504

[Close]

BLAST of Clc05G11460 vs. TAIR 10
Match: AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 175.3 bits (443), Expect = 1.6e-43
Identity = 112/419 (26.73%), Postives = 201/419 (47.97%), Query Frame = 0


Query: 93  SALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYAD 152
           SA S   L+   R+ + + +   ++A    R  I+S   PT+   + + +A  +  +Y  
Sbjct: 47  SAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDL 106

Query: 153 LLSLHRFITQAGVAPNIMTHNLILQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILI 212
           +L+L + +   G+A N+ T ++++  +  CRK   A     ++I    + P+  T+  LI
Sbjct: 107 VLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIK-LGYEPNTITFSTLI 166

Query: 213 KGLVDNNKLERAMELKEEMTVKGFVPDPLIYHYLMVGCVRSSDPDGVFKLFEELKEKLGG 272
            GL    ++  A+EL + M   G  PD +  + L+ G   S        L +++ E   G
Sbjct: 167 NGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY--G 226

Query: 273 TVEDGVVYGSLMKGYFMKGMEEEAMRCYEETVGENSVVKMSAIAYNSVLDALCRNGKFGE 332
              + V YG ++      G    AM    +    N  +K+ A+ Y+ ++D LC++G    
Sbjct: 227 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN--IKLDAVKYSIIIDGLCKHGSLDN 286

Query: 333 ALMLFDRMTKEHSPPRRPAVNLGSFNVMVDGYCIEGRFKDAMEVFEKMGDYRCSPDTLSF 392
           A  LF+ M       +    N+ ++N+++ G+C  GR+ D  ++   M   + +P+ ++F
Sbjct: 287 AFNLFNEMEM-----KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 346

Query: 393 NNLIEQLCNNGMLPEAEKLYGTMGDKGVNPDEFTYALLMDSCFKENRADDAAGYFKKMVE 452
           + LI+     G L EAE+L+  M  +G+ PD  TY  L+D   KEN  D A      MV 
Sbjct: 347 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 406

Query: 453 SGLRPNIAVYNRLVDELVKLGKIEDAKSFFDLM-VKKLKMDASSYQFIMKALSELGKLD 511
            G  PNI  +N L++   K  +I+D    F  M ++ +  D  +Y  +++   ELGKL+
Sbjct: 407 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455

[Close]

BLAST of Clc05G11460 vs. TAIR 10
Match: AT1G12620.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 167.9 bits (424), Expect = 2.5e-41
Identity = 118/451 (26.16%), Postives = 209/451 (46.34%), Query Frame = 0


Query: 109 LIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVAPN 168
           L  E  + EA       +    +PT+ T+NA++N      K +D + L   + + G  PN
Sbjct: 152 LCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211

Query: 169 IMTHNLILQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELK 228
            +T+  +L+      +   AME  +++  +         Y I+I GL  +  L+ A  L 
Sbjct: 212 EVTYGPVLKVMCKSGQTALAMELLRKM-EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 271

Query: 229 EEMTVKGFVPDPLIYHYLMVG-CVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGY 288
            EM +KGF  D +IY  L+ G C      DG   L + +K K+     D V + +L+  +
Sbjct: 272 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI---TPDVVAFSALIDCF 331

Query: 289 FMKGMEEEAMRCYEETVGENSVVKMSAIAYNSVLDALCRNGKFGEALMLFDRMTKEHSPP 348
             +G   EA   ++E +     +    + Y S++D  C+  +  +A  + D M  +   P
Sbjct: 332 VKEGKLREAEELHKEMIQRG--ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 391

Query: 349 RRPAVNLGSFNVMVDGYCIEGRFKDAMEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLPE 408
                N+ +FN++++GYC      D +E+F KM       DT+++N LI+  C  G L  
Sbjct: 392 -----NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 451

Query: 409 AEKLYGTMGDKGVNPDEFTYALLMDSCFKENRADDAAGYFKKMVESGLRPNIAVYNRLVD 468
           A++L+  M  + V PD  +Y +L+D        + A   F+K+ +S +  +I +YN ++ 
Sbjct: 452 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 511

Query: 469 ELVKLGKIEDAKSFF-DLMVKKLKMDASSYQFIMKALSELGKLDELLNVVDTLLDDDGIE 528
            +    K++DA   F  L +K +K D  +Y  ++  L + G L E   +   + +D    
Sbjct: 512 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 571

Query: 529 FSEELQEFVRGELRKEDREEDLAKLVEEKER 558
                   +R  L + D  +  AKL+EE +R
Sbjct: 572 NGCTYNILIRAHLGEGDATKS-AKLIEEIKR 590

The following BLAST results are available for this feature:

BLAST of Clc05G11460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897801.1	0.0e+00	95.02	pentatricopeptide repeat-containing protein At3g49240, mitochondrial [Benincasa ...	[more]
XP_023553006.1	0.0e+00	92.91	pentatricopeptide repeat-containing protein At3g49240, mitochondrial-like [Cucur...	[more]
XP_022922766.1	0.0e+00	93.08	pentatricopeptide repeat-containing protein At3g49240, mitochondrial [Cucurbita ...	[more]
KAG6576653.1	0.0e+00	92.75	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022984619.1	0.0e+00	92.59	pentatricopeptide repeat-containing protein At3g49240, mitochondrial [Cucurbita ...	[more]

BLAST of Clc05G11460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M3A8	2.9e-220	64.22	Pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Arabidop...	[more]
Q9SY69	2.1e-80	35.21	Pentatricopeptide repeat-containing protein At1g10270 OS=Arabidopsis thaliana OX...	[more]
Q3EDF8	2.6e-43	25.67	Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX...	[more]
Q0WKV3	2.2e-42	26.73	Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop...	[more]
Q9ASZ8	3.5e-40	26.16	Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX...	[more]

BLAST of Clc05G11460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E509	0.0e+00	93.08	pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Cucurbit...	[more]
A0A6J1JB23	0.0e+00	92.59	pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Cucurbit...	[more]
A0A0A0L7B2	0.0e+00	90.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239860 PE=4 SV=1	[more]
A0A6J1CK90	0.0e+00	88.43	pentatricopeptide repeat-containing protein At3g49240 OS=Momordica charantia OX=...	[more]
A0A5A7UA91	4.6e-310	88.94	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Clc05G11460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49240.1	2.1e-221	64.22	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G10270.1	1.5e-81	35.21	glutamine-rich protein 23	[more]
AT1G09900.1	1.9e-44	25.67	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G12300.1	1.6e-43	26.73	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G12620.1	2.5e-41	26.16	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 541..580
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 592..621
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..91
None	No IPR available	PANTHER	PTHR47933:SF12	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 1..600
None	No IPR available	PANTHER	PTHR47933	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL	coord: 1..600
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 274..351 e-value: 3.0E-13 score: 51.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 352..440 e-value: 4.0E-24 score: 87.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 441..606 e-value: 9.2E-17 score: 63.4 coord: 99..273 e-value: 6.6E-28 score: 100.0
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 287..487
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 356..389 e-value: 9.3E-9 score: 32.9 coord: 425..459 e-value: 2.6E-7 score: 28.4 coord: 207..239 e-value: 2.2E-6 score: 25.5 coord: 316..344 e-value: 5.6E-8 score: 30.5 coord: 391..424 e-value: 1.1E-4 score: 20.2 coord: 461..488 e-value: 5.5E-4 score: 17.9
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 316..343 e-value: 1.1E-7 score: 31.5 coord: 243..269 e-value: 0.091 score: 13.1 coord: 207..236 e-value: 7.0E-4 score: 19.7 coord: 461..488 e-value: 0.0034 score: 17.5 coord: 278..302 e-value: 0.0064 score: 16.7
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 355..380 e-value: 5.5E-7 score: 29.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 129..179 e-value: 0.001 score: 19.1
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 387..435 e-value: 7.8E-12 score: 45.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 204..238 score: 11.081932
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 353..387 score: 12.199985
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 423..457 score: 11.838262
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 313..347 score: 12.298636
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 458..488 score: 9.152743
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 388..422 score: 11.421732

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G11460.1	Clc05G11460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0009960	endosperm development
biological_process	GO:0006349	regulation of gene expression by genetic imprinting
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding