Clc05G10320 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G10320
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	25.3 kDa vesicle transport protein
Location	ClcChr05: 8283328 .. 8287130 (+)
RNA-Seq Expression	Clc05G10320
Synteny	Clc05G10320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

atggttggaagagttagagatggattgccaattgcacaaggtattagatatgttaatgaagagaatgatgatattttgggctacaaaaagcaagctgaattcatactcaaagagatctctagaggaactatatcaccttcaaaaatggccattctaatgcatcatcactgtttcatgtaccaccctttctcttttctcctttcattcaattgggtttcctttttttttttttttttccattcacttctttattccaaatcaatataatctagaaatcaattaataataatgttggagaaagtttttttttttttttccttctcccaaaaatcacttctcaaatatggtagtaaatatggtagtggcaatatttatatcctcaagctttcaattgtaaaaattgagctctcaaacatttgaaaatgttaaaattgaacccttaaacttccaatagttatagaaattggacactcaaatgataagaatagaaccctcaaacttataccattgttacaatttctacaattatgtaagtttgaaggtccaattttaacacttgaacaactttgggggctcaattcttacaattgaaagtttgaaggtatataattgcaattaccacctaaatttcttgatttcttatctactttttacaaatgtcttaaaaaaccaagccaaaatttagaactaaaaaaaagtaatttttaaaaacatgtttttatttttagaatttgagtgagaattcaacctcgtattaaaaaaaaaaaaaaaaagatacaacttattataagaaattgagagaaaatatgcttaatttttaaaaaacaagatgaataccaaccggaagcggaaattgaaaagtaacttataaaaaaatcacaattagcaacataaacctaaagttggacatatgttggttttgttttgtttttgtatttagttacttggtggagaatggtgtatgctatatgacattgtgcgattcttcgtacccaagaaagctggctctccattacttgcaagatttgcaaaaagagtttgggaagtttgatgatgccctaataaataaccttatgaaaccctatagttttatcaaatttggtaacctttctaaaccctcttcatactttctttccaaaatgtgttcaacaaggaaacattatttttctaccttcctctataaatatgctttttttctttatctttttaaacaaatatttgatgcctctacctcccccaactcatcgataataatcaaaagaaaagaatatatcaactttgtaataacttaatatatctttgttattctcatttttgtcccctactttacttccttccaaagaaaagtcaattgtttgcttactgtaacaaatcaattactaacgtgatcatttagtttttcatctttagttttaaaaaattaagtctataaaagtcttttcgacttttaaatttcttgcttagttactactttctattaatattttcaaaaatcaaccaaagtttcaaaaactaaaaaaaaaaatagctttttaaaaatttacttttttttatttattattattttttattttttggaatttggaagaattccaactcgtttgattaagataagcttttgaaaatcatagtatgaaatttaagagaaagtaaaccttattttcaaataaataaataaataaataatcaaagagctatcacatggataggggtgttgataaaaaacccgatggctcgaccaataatgcccaactcaactcaaaataactcaaaccaactctaatctattattagttttaaaaaatatgtaatttaattataaaacaattatgtatacaatttttttaattttaattttattttatttcattataatttttctactcatttattctccaacaactcttaaaaataatttttttagcattttggaaagaaaattttcataatataaattgaaattgagttgctaatcttaattcaacgtatgaaaataattaaataatttttttatattttgacattttacttatttttcgaataaaatttaaataagtgactagaattaacccaaactaattcaactcaaatactttgtggtagagttcattatttaataaaggttatttgggttgaaaaaatttataaccgaacaattggattggatctaaaaagtgcttcaacctaatccaatccaacgcacgaacaatcctacaaatgggacccaaaattttcttctagctagctaacagtctcattcatgttttttttttagtgtatttagattgaacgactaattaacccatatttgattcaaatattgtagatagtattattagcaatgttaggaaacaatacattgatacaagaacacaggccaatctatgcaagctcaatgcaaatcgtcgtcaacctgatctagacatgctcacttgttcgctttctgagattctagagagaaggagaaaactaggtaactatttctaatttcttattcacaatttttggatcgattttttttttttttttgactgaatgactgcatgaatttgatggacattgatattatatttgataaacatagaattccatctcaaaactaatttgtttataaaaagagtattctcatctttataaagattgtaaggtctctctattttttctatgtaggattttctcaaaattaagtcaactttgaaaatactacatctcacaaaaataaataaataaaataaaaacaaatgggtctacataaaacttcaattttatgtccagtaagtttgtgaattttgaaaaatattgaataggtcaacaaaaactcaaacaaaaatccaatgttatgttggaaataacctctcactattatggcagaaataagcagaaatacaattgagaaattaaaagaaaacaataaaacctaaaaaatttatgtgaaagaaatccaaaatgggagagaaatcatgagttgcgggaaagaaatctactatgtgaaaatttgttaattactatgacatagaattctctctccaatcataattacaaaaacactatcttaaagcttagaaatttgactagggttaatacactaaaacttaaattgtttgtcttactgtgacactacgtaaaccaaaactatagactcattttatagtgccttagagcacatcactttcttgaacctttcacatatgagacaactactcctctaatatattttaccaaaattcaatatattgaacacaaaattaagatttcgaaactattagtattagatacttttaatgtgtacaaactaaattaacacaaaagtaaaagtctaagaagtagagttataatttatccccagatttattttggttggaaagtttgaaaaatcatcacaaaattaaacaaagtgaatatatgatttgattaaatgaattatataaagactatgttacattaatgtaattcagatatggtggaaagatcaatgtgtaatacgaattctcaaggtgcatcctcctccatttgggggtctccctgtcttgaggtaggttgaagttgatggattaattagtttaattttaattattagcacttaaataaagtattaatattgtataaattaagaaacgccttaattaattttggttgatgttgtttgtatatgtcaggaaattgttctgaaatggacgccaatggttgtaacttttgccgtagtgcttatcactctatgggctttttttcttctcttcgacatctcattatctcatcataatgaatttgtaattctttataacaacagaaaattgtttcactaa

mRNA sequence

atggttggaagagttagagatggattgccaattgcacaaggtattagatatgttaatgaagagaatgatgatattttgggctacaaaaagcaagctgaattcatactcaaagagatctctagaggaactatatcaccttcaaaaatggccattctaatgcatcatcactgtttcatttacttggtggagaatggtgtatgctatatgacattgtgcgattcttcgtacccaagaaagctggctctccattacttgcaagatttgcaaaaagagtttgggaagtttgatgatgccctaataaataaccttatgaaaccctatagttttatcaaatttgatagtattattagcaatgttaggaaacaatacattgatacaagaacacaggccaatctatgcaagctcaatgcaaatcgtcgtcaacctgatctagacatgctcacttgttcgctttctgagattctagagagaaggagaaaactagatatggtggaaagatcaatgtgtaatacgaattctcaaggtgcatcctcctccatttgggggtctccctgtcttgaggaaattgttctgaaatggacgccaatggttgtaacttttgccgtagtgcttatcactctatgggctttttttcttctcttcgacatctcattatctcatcataatgaatttgtaattctttataacaacagaaaattgtttcactaa

Coding sequence (CDS)

atggttggaagagttagagatggattgccaattgcacaaggtattagatatgttaatgaagagaatgatgatattttgggctacaaaaagcaagctgaattcatactcaaagagatctctagaggaactatatcaccttcaaaaatggccattctaatgcatcatcactgtttcatttacttggtggagaatggtgtatgctatatgacattgtgcgattcttcgtacccaagaaagctggctctccattacttgcaagatttgcaaaaagagtttgggaagtttgatgatgccctaataaataaccttatgaaaccctatagttttatcaaatttgatagtattattagcaatgttaggaaacaatacattgatacaagaacacaggccaatctatgcaagctcaatgcaaatcgtcgtcaacctgatctagacatgctcacttgttcgctttctgagattctagagagaaggagaaaactagatatggtggaaagatcaatgtgtaatacgaattctcaaggtgcatcctcctccatttgggggtctccctgtcttgaggaaattgttctgaaatggacgccaatggttgtaacttttgccgtagtgcttatcactctatgggctttttttcttctcttcgacatctcattatctcatcataatgaatttgtaattctttataacaacagaaaattgtttcactaa

Protein sequence

MVGRVRDGLPIAQGIRYVNEENDDILGYKKQAEFILKEISRGTISPSKMAILMHHHCFIYLVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINNLMKPYSFIKFDSIISNVRKQYIDTRTQANLCKLNANRRQPDLDMLTCSLSEILERRRKLDMVERSMCNTNSQGASSSIWGSPCLEEIVLKWTPMVVTFAVVLITLWAFFLLFDISLSHHNEFVILYNNRKLFH

Homology

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BLAST of Clc05G10320 vs. NCBI nr
Match: XP_008439222.1 (PREDICTED: 25.3 kDa vesicle transport protein isoform X1 [Cucumis melo])

HSP 1 Score: 425.2 bits (1092), Expect = 3.6e-115
Identity = 210/234 (89.74%), Postives = 218/234 (93.16%), Query Frame = 0


Query: 1   MVGRVRDGLPIAQGIRYVNEENDDILGYKKQAEFILKEISRGTISPSKMAILMHHHCFIY 60
           MVGRVRDGLPIAQGIRYVNEENDD+ GYKKQAEFILKEISRGT+SP KM ILMHHH FIY
Sbjct: 6   MVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHHHSFIY 65

Query: 61  LVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINNLMKPYSFIKFDSIISNVR 120
           LVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALIN L+KPYSF+KFDSIISNVR
Sbjct: 66  LVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSIISNVR 125

Query: 121 KQYIDTRTQANLCKLNANRRQPDLDMLTCSLSEILERRRKLDMVERSMCNTNSQGASSSI 180
           KQYIDTRTQ NLCKLNANRRQPD D+L+CS SEILERRRKLD+ ERS CNTNSQG SSSI
Sbjct: 126 KQYIDTRTQVNLCKLNANRRQPDPDILSCSFSEILERRRKLDIEERSRCNTNSQGTSSSI 185

Query: 181 WGSPCLEEIVLKWTPMVVTFAVVLITLWAFFLLFDISLSHHNEFVILYNNRKLF 235
           WGSP LEEI LKWTPMVVTF VVLI LWA FLLFDISLSHHN+FVILYNNRKLF
Sbjct: 186 WGSPYLEEIGLKWTPMVVTFGVVLIVLWASFLLFDISLSHHNQFVILYNNRKLF 239

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BLAST of Clc05G10320 vs. NCBI nr
Match: XP_038875892.1 (25.3 kDa vesicle transport protein [Benincasa hispida])

HSP 1 Score: 424.1 bits (1089), Expect = 7.9e-115
Identity = 212/236 (89.83%), Postives = 221/236 (93.64%), Query Frame = 0


Query: 1   MVGRVRDGLPIAQGIRYVNEENDDILGYKKQAEFILKEISRGTISPSKMAILMHHHCFIY 60
           MVGRVRDGLPIAQGIRY+NEENDD+LGYKKQAEFILKEISRGT+S SKMAILMHHHCFIY
Sbjct: 6   MVGRVRDGLPIAQGIRYINEENDDVLGYKKQAEFILKEISRGTLSSSKMAILMHHHCFIY 65

Query: 61  LVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINNLMKPYSFIKFDSIISNVR 120
           LVENGVCYMTLCDSSYPRKLALHYLQDLQKE G+F+ ALIN L+KPYS  +FD IISN+R
Sbjct: 66  LVENGVCYMTLCDSSYPRKLALHYLQDLQKEVGEFEYALINKLIKPYSLTQFDGIISNIR 125

Query: 121 KQYIDTRTQANLCKLNANRRQPDLDMLTCSLSEILERRRKLDMVERSMC-NTNSQGASSS 180
           KQYIDTRTQANLCKLNANRRQ D DMLTCSLSEILERRRKLDMVERSMC NTNSQGASSS
Sbjct: 126 KQYIDTRTQANLCKLNANRRQADPDMLTCSLSEILERRRKLDMVERSMCNNTNSQGASSS 185

Query: 181 IWGSPCLEEIVLKWTPMVVTFAVVLITLWAFFLLFDISLSHHNEFVILYNNRKLFH 236
           IWGSPCL+EI LKWTPMVVTF VVLI LWA FLLFDISLS HNEFVILYNNRKLFH
Sbjct: 186 IWGSPCLQEIGLKWTPMVVTFGVVLIILWASFLLFDISLSQHNEFVILYNNRKLFH 241

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BLAST of Clc05G10320 vs. NCBI nr
Match: XP_011651150.1 (25.3 kDa vesicle transport protein isoform X1 [Cucumis sativus] >KGN57371.1 hypothetical protein Csa_011539 [Cucumis sativus])

HSP 1 Score: 411.4 bits (1056), Expect = 5.3e-111
Identity = 207/236 (87.71%), Postives = 216/236 (91.53%), Query Frame = 0


Query: 1   MVGRVRDGLPIAQGIRYVNEENDDILGYKKQAEFILKEISRGTISPSKMAILMHHHCFIY 60
           MVGRVRDGLPIAQGIRYVNEENDD+ GYKKQAEFILKEISRGT+SP KM ILMHHH FIY
Sbjct: 6   MVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHHHSFIY 65

Query: 61  LVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINNLMKPYSFIKFDSIISNVR 120
           LVENGVCYMTLCDSSYPRKLA+HYLQDLQKEFGKFDDALIN L+KPYSF+KFDSIISNVR
Sbjct: 66  LVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSIISNVR 125

Query: 121 KQYIDTRTQANLCKLNANRRQPDLDMLTCSLSEILERRRKLDMVERSMC--NTNSQGASS 180
           KQYIDTRTQANL KLNANRRQPD D+ TCSLSEILERRRK DMVERS    NTNS+G S 
Sbjct: 126 KQYIDTRTQANLSKLNANRRQPDPDISTCSLSEILERRRKFDMVERSRSNNNTNSEGNSC 185

Query: 181 SIWGSPCLEEIVLKWTPMVVTFAVVLITLWAFFLLFDISLSHHNEFVILYNNRKLF 235
           SIWGSP LEEI +KWTPMVVTF VVLI LWA FLLFDISLSHHN+FVILYNNRKLF
Sbjct: 186 SIWGSPYLEEIGVKWTPMVVTFGVVLIVLWASFLLFDISLSHHNQFVILYNNRKLF 241

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BLAST of Clc05G10320 vs. NCBI nr
Match: XP_022968542.1 (25.3 kDa vesicle transport protein isoform X1 [Cucurbita maxima])

HSP 1 Score: 369.0 bits (946), Expect = 3.0e-98
Identity = 183/236 (77.54%), Postives = 208/236 (88.14%), Query Frame = 0


Query: 1   MVGRVRDGLPIAQGIRYVNEENDDILGYKKQAEFILKEISRGTISPSKMAILMHHHCFIY 60
           MVGRVRDG+P+AQGIRYVNEENDD+LGYK+QAEFILKEISRG +S  KMAI MHHH FIY
Sbjct: 6   MVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSSPKMAIQMHHHSFIY 65

Query: 61  LVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINNLMKPYSFIKFDSIISNVR 120
           L+ENGVCYMTLCDS YPRKLA+HYLQDLQ+EF KFDDAL+N+L+KPYSF KFD+IISN+R
Sbjct: 66  LIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKPYSFPKFDNIISNIR 125

Query: 121 KQYIDTRTQANLCKLNANRRQPDLDMLTCSLSEILERRRKL-DMVERSMCNTNSQGASSS 180
           K+YIDTRTQ NL KLN +R Q DLD++TCS+SEI ERRRK+ DMVERS+CN N    SSS
Sbjct: 126 KRYIDTRTQVNLYKLNDSRSQTDLDIVTCSISEIFERRRKITDMVERSICNAN----SSS 185

Query: 181 IWGSPCLEEIVLKWTPMVVTFAVVLITLWAFFLLFDISLSHHNEFVILYNNRKLFH 236
           IW    ++EI LKWTP+VVTF VVL+ LWA FLLFDISLSHHN+FVILYNNRKLFH
Sbjct: 186 IWSFSFVKEIGLKWTPVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLFH 237

[Close]

BLAST of Clc05G10320 vs. NCBI nr
Match: XP_022944814.1 (25.3 kDa vesicle transport protein isoform X1 [Cucurbita moschata])

HSP 1 Score: 364.4 bits (934), Expect = 7.4e-97
Identity = 180/236 (76.27%), Postives = 203/236 (86.02%), Query Frame = 0


Query: 1   MVGRVRDGLPIAQGIRYVNEENDDILGYKKQAEFILKEISRGTISPSKMAILMHHHCFIY 60
           MVGRVRDG+P+AQGIRYVNEENDD+LGYK+QAEFILKEISRG +SP KM I MHHH FIY
Sbjct: 49  MVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIY 108

Query: 61  LVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINNLMKPYSFIKFDSIISNVR 120
           L+ENGVCYMTLCDS YPRKLA+HYLQDLQ+EF KFDDAL+N+L+KPYSF+KFD+II N+R
Sbjct: 109 LIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKPYSFLKFDNIIINIR 168

Query: 121 KQYIDTRTQANLCKLNANRRQPDLDMLTCSLSEILERRRKL-DMVERSMCNTNSQGASSS 180
           K+YIDTRTQ NL KLN  R Q DLDM+TCS  EI ERRRK+ D  ERS+CN N    SSS
Sbjct: 169 KRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFFEIFERRRKITDRAERSICNAN----SSS 228

Query: 181 IWGSPCLEEIVLKWTPMVVTFAVVLITLWAFFLLFDISLSHHNEFVILYNNRKLFH 236
           IW    ++EI LKWTP+VVTF VVL+ LWA FLLFDISLSHHN+FVILYNNRKLFH
Sbjct: 229 IWSFSIVKEIGLKWTPVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLFH 280

[Close]

BLAST of Clc05G10320 vs. ExPASy Swiss-Prot
Match: Q94AU2 (25.3 kDa vesicle transport protein OS=Arabidopsis thaliana OX=3702 GN=SEC22 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 6.7e-32
Identity = 76/212 (35.85%), Postives = 119/212 (56.13%), Query Frame = 0


Query: 1   MVGRVRDGLPIAQGIRYVNEENDDILGYKKQAEFILKEISRGTISPSKMAILMHHHCFIY 60
           ++ RV DGLP+A+G+    +  D  + YK+Q + + K +SRG    S+M++    + F Y
Sbjct: 6   LIARVTDGLPLAEGLDDGRDLPDSDM-YKQQVKALFKNLSRGQNDASRMSVETGPYVFHY 65

Query: 61  LVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINNLMKPYSFIKFDSIISNVR 120
           ++E  VCY+T+CD SYP+KLA  YL+DL+ EF + +   I    +PY+FIKFD+ I   +
Sbjct: 66  IIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPYAFIKFDTFIQKTK 125

Query: 121 KQYIDTRTQANLCKLNANRRQPDLDMLTCSLSEILERRRKLDMVERSMCNTNSQGASSSI 180
           K Y DTRTQ N+ KLN    +    ++T ++ E+L    KLD V        S+   S I
Sbjct: 126 KLYQDTRTQRNIAKLNDELYEVH-QIMTRNVQEVLGVGEKLDQVSEMSSRLTSE---SRI 185

Query: 181 WGSPC----LEEIVLKWTPMVVTFAVVLITLW 209
           +         + ++ KW P+ + F VV +  W
Sbjct: 186 YADKAKDLNRQALIRKWAPVAIVFGVVFLLFW 212

[Close]

BLAST of Clc05G10320 vs. ExPASy Swiss-Prot
Match: Q5ZJW4 (Vesicle-trafficking protein SEC22b OS=Gallus gallus OX=9031 GN=SEC22B PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.9e-24
Identity = 57/173 (32.95%), Postives = 101/173 (58.38%), Query Frame = 0


Query: 1   MVGRVRDGLPIAQGIRYVNEENDDILGYKKQAEFILKEISRGTISPSKMAILMHHHCFIY 60
           M+ RV DGLP+A  ++   +   D+  Y+ QA+ + ++++    SP++  +      F Y
Sbjct: 6   MIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLNEQ--SPTRCTLEAGAMAFHY 65

Query: 61  LVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINNLMKPYSFIKFDSIISNVR 120
           ++E GVCY+ LC++++P+KLA  YL+DLQ EF +     +  + +PYSFI+FD+ I   +
Sbjct: 66  IIEKGVCYLVLCEAAFPKKLAFAYLEDLQSEFDEQHGKKVPTVSRPYSFIEFDTYIQKTK 125

Query: 121 KQYIDTRTQANLCKLNANRRQPDLDMLTCSLSEILERRRKLDMVERSMCNTNS 174
           K YID+R + NL  +N    Q    ++  ++ E+L+R   L  ++    N +S
Sbjct: 126 KLYIDSRARRNLGSIN-TELQDVQRIMVANIEEVLQRGEALSALDSKANNLSS 175

[Close]

BLAST of Clc05G10320 vs. ExPASy Swiss-Prot
Match: Q7ZV15 (Vesicle-trafficking protein SEC22b-A OS=Danio rerio OX=7955 GN=sec22ba PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.7e-24
Identity = 56/173 (32.37%), Postives = 101/173 (58.38%), Query Frame = 0


Query: 1   MVGRVRDGLPIAQGIRYVNEENDDILGYKKQAEFILKEISRGTISPSKMAILMHHHCFIY 60
           M+ RV D LP+A  ++   +   D+  Y+ QA+ + ++++    SP++  +     CF Y
Sbjct: 6   MIVRVADSLPLAASMQEDEQSGRDLQKYQSQAKQLCRKLNEQ--SPARCTLEAGKMCFHY 65

Query: 61  LVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINNLMKPYSFIKFDSIISNVR 120
           ++E GVCY+ LC++ +P+KLA  YL+DL+ EF +   A + ++ +PYSFI+FD+ I    
Sbjct: 66  VIEKGVCYLALCEAGFPKKLAFAYLEDLEGEFSEQYGAKVPSVSRPYSFIEFDTYIQKTI 125

Query: 121 KQYIDTRTQANLCKLNANRRQPDLDMLTCSLSEILERRRKLDMVERSMCNTNS 174
           K YID+R + NL  +N+        ++  ++ E+L+R   L  ++    N +S
Sbjct: 126 KSYIDSRARRNLGNINSELHDVQ-RIMVANIEEVLQRGEALSALDSKASNLSS 175

[Close]

BLAST of Clc05G10320 vs. ExPASy Swiss-Prot
Match: Q7SXP0 (Vesicle-trafficking protein SEC22b-B OS=Danio rerio OX=7955 GN=sec22bb PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.7e-24
Identity = 56/173 (32.37%), Postives = 100/173 (57.80%), Query Frame = 0


Query: 1   MVGRVRDGLPIAQGIRYVNEENDDILGYKKQAEFILKEISRGTISPSKMAILMHHHCFIY 60
           M+ R+ DGLP+A  ++   +   D+  Y+ QA+ + ++++    SP++  +      F Y
Sbjct: 6   MIARLADGLPLAASMQEDEQMGRDLQQYQSQAKQLFRKLNEQ--SPNRCTLEAGSMSFHY 65

Query: 61  LVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINNLMKPYSFIKFDSIISNVR 120
           ++E GVCY+ LC++ +P+KLA  YL+DLQ EF +     +  + +PYSFI+FD+ I   +
Sbjct: 66  VIEKGVCYLVLCEAGFPKKLAFAYLEDLQAEFHEQHGKKVPTVSRPYSFIEFDTYIQKTK 125

Query: 121 KQYIDTRTQANLCKLNANRRQPDLDMLTCSLSEILERRRKLDMVERSMCNTNS 174
           K YID+R + NL  +N    Q    ++  ++ E+L+R   L  ++    N +S
Sbjct: 126 KSYIDSRARRNLSNIN-TELQDVQRIMVANIEEVLQRGEALSALDSKASNLSS 175

[Close]

BLAST of Clc05G10320 vs. ExPASy Swiss-Prot
Match: O08547 (Vesicle-trafficking protein SEC22b OS=Mus musculus OX=10090 GN=Sec22b PE=1 SV=3)

HSP 1 Score: 111.3 bits (277), Expect = 1.5e-23
Identity = 56/173 (32.37%), Postives = 100/173 (57.80%), Query Frame = 0


Query: 1   MVGRVRDGLPIAQGIRYVNEENDDILGYKKQAEFILKEISRGTISPSKMAILMHHHCFIY 60
           M+ RV DGLP+A  ++   +   D+  Y+ QA+ + ++++    SP++  +      F Y
Sbjct: 6   MIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLNEQ--SPTRCTLEAGAMTFHY 65

Query: 61  LVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINNLMKPYSFIKFDSIISNVR 120
           ++E GVCY+ LC++++P+KLA  YL+DL  EF +     +  + +PYSFI+FD+ I   +
Sbjct: 66  IIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTK 125

Query: 121 KQYIDTRTQANLCKLNANRRQPDLDMLTCSLSEILERRRKLDMVERSMCNTNS 174
           K YID+R + NL  +N    Q    ++  ++ E+L+R   L  ++    N +S
Sbjct: 126 KLYIDSRARRNLGSIN-TELQDVQRIMVANIEEVLQRGEALSALDSKANNLSS 175

[Close]

BLAST of Clc05G10320 vs. ExPASy TrEMBL
Match: A0A1S3AYX3 (25.3 kDa vesicle transport protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484073 PE=3 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.7e-115
Identity = 210/234 (89.74%), Postives = 218/234 (93.16%), Query Frame = 0


Query: 1   MVGRVRDGLPIAQGIRYVNEENDDILGYKKQAEFILKEISRGTISPSKMAILMHHHCFIY 60
           MVGRVRDGLPIAQGIRYVNEENDD+ GYKKQAEFILKEISRGT+SP KM ILMHHH FIY
Sbjct: 6   MVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHHHSFIY 65

Query: 61  LVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINNLMKPYSFIKFDSIISNVR 120
           LVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALIN L+KPYSF+KFDSIISNVR
Sbjct: 66  LVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSIISNVR 125

Query: 121 KQYIDTRTQANLCKLNANRRQPDLDMLTCSLSEILERRRKLDMVERSMCNTNSQGASSSI 180
           KQYIDTRTQ NLCKLNANRRQPD D+L+CS SEILERRRKLD+ ERS CNTNSQG SSSI
Sbjct: 126 KQYIDTRTQVNLCKLNANRRQPDPDILSCSFSEILERRRKLDIEERSRCNTNSQGTSSSI 185

Query: 181 WGSPCLEEIVLKWTPMVVTFAVVLITLWAFFLLFDISLSHHNEFVILYNNRKLF 235
           WGSP LEEI LKWTPMVVTF VVLI LWA FLLFDISLSHHN+FVILYNNRKLF
Sbjct: 186 WGSPYLEEIGLKWTPMVVTFGVVLIVLWASFLLFDISLSHHNQFVILYNNRKLF 239

[Close]

BLAST of Clc05G10320 vs. ExPASy TrEMBL
Match: A0A0A0LBE2 (Longin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G182070 PE=3 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 2.6e-111
Identity = 207/236 (87.71%), Postives = 216/236 (91.53%), Query Frame = 0


Query: 1   MVGRVRDGLPIAQGIRYVNEENDDILGYKKQAEFILKEISRGTISPSKMAILMHHHCFIY 60
           MVGRVRDGLPIAQGIRYVNEENDD+ GYKKQAEFILKEISRGT+SP KM ILMHHH FIY
Sbjct: 6   MVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHHHSFIY 65

Query: 61  LVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINNLMKPYSFIKFDSIISNVR 120
           LVENGVCYMTLCDSSYPRKLA+HYLQDLQKEFGKFDDALIN L+KPYSF+KFDSIISNVR
Sbjct: 66  LVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSIISNVR 125

Query: 121 KQYIDTRTQANLCKLNANRRQPDLDMLTCSLSEILERRRKLDMVERSMC--NTNSQGASS 180
           KQYIDTRTQANL KLNANRRQPD D+ TCSLSEILERRRK DMVERS    NTNS+G S 
Sbjct: 126 KQYIDTRTQANLSKLNANRRQPDPDISTCSLSEILERRRKFDMVERSRSNNNTNSEGNSC 185

Query: 181 SIWGSPCLEEIVLKWTPMVVTFAVVLITLWAFFLLFDISLSHHNEFVILYNNRKLF 235
           SIWGSP LEEI +KWTPMVVTF VVLI LWA FLLFDISLSHHN+FVILYNNRKLF
Sbjct: 186 SIWGSPYLEEIGVKWTPMVVTFGVVLIVLWASFLLFDISLSHHNQFVILYNNRKLF 241

[Close]

BLAST of Clc05G10320 vs. ExPASy TrEMBL
Match: A0A6J1HTS6 (25.3 kDa vesicle transport protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467744 PE=3 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.5e-98
Identity = 183/236 (77.54%), Postives = 208/236 (88.14%), Query Frame = 0


Query: 1   MVGRVRDGLPIAQGIRYVNEENDDILGYKKQAEFILKEISRGTISPSKMAILMHHHCFIY 60
           MVGRVRDG+P+AQGIRYVNEENDD+LGYK+QAEFILKEISRG +S  KMAI MHHH FIY
Sbjct: 6   MVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSSPKMAIQMHHHSFIY 65

Query: 61  LVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINNLMKPYSFIKFDSIISNVR 120
           L+ENGVCYMTLCDS YPRKLA+HYLQDLQ+EF KFDDAL+N+L+KPYSF KFD+IISN+R
Sbjct: 66  LIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKPYSFPKFDNIISNIR 125

Query: 121 KQYIDTRTQANLCKLNANRRQPDLDMLTCSLSEILERRRKL-DMVERSMCNTNSQGASSS 180
           K+YIDTRTQ NL KLN +R Q DLD++TCS+SEI ERRRK+ DMVERS+CN N    SSS
Sbjct: 126 KRYIDTRTQVNLYKLNDSRSQTDLDIVTCSISEIFERRRKITDMVERSICNAN----SSS 185

Query: 181 IWGSPCLEEIVLKWTPMVVTFAVVLITLWAFFLLFDISLSHHNEFVILYNNRKLFH 236
           IW    ++EI LKWTP+VVTF VVL+ LWA FLLFDISLSHHN+FVILYNNRKLFH
Sbjct: 186 IWSFSFVKEIGLKWTPVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLFH 237

[Close]

BLAST of Clc05G10320 vs. ExPASy TrEMBL
Match: A0A6J1FZ74 (25.3 kDa vesicle transport protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449240 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.6e-97
Identity = 180/236 (76.27%), Postives = 203/236 (86.02%), Query Frame = 0


Query: 1   MVGRVRDGLPIAQGIRYVNEENDDILGYKKQAEFILKEISRGTISPSKMAILMHHHCFIY 60
           MVGRVRDG+P+AQGIRYVNEENDD+LGYK+QAEFILKEISRG +SP KM I MHHH FIY
Sbjct: 49  MVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIY 108

Query: 61  LVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINNLMKPYSFIKFDSIISNVR 120
           L+ENGVCYMTLCDS YPRKLA+HYLQDLQ+EF KFDDAL+N+L+KPYSF+KFD+II N+R
Sbjct: 109 LIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKPYSFLKFDNIIINIR 168

Query: 121 KQYIDTRTQANLCKLNANRRQPDLDMLTCSLSEILERRRKL-DMVERSMCNTNSQGASSS 180
           K+YIDTRTQ NL KLN  R Q DLDM+TCS  EI ERRRK+ D  ERS+CN N    SSS
Sbjct: 169 KRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFFEIFERRRKITDRAERSICNAN----SSS 228

Query: 181 IWGSPCLEEIVLKWTPMVVTFAVVLITLWAFFLLFDISLSHHNEFVILYNNRKLFH 236
           IW    ++EI LKWTP+VVTF VVL+ LWA FLLFDISLSHHN+FVILYNNRKLFH
Sbjct: 229 IWSFSIVKEIGLKWTPVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLFH 280

[Close]

BLAST of Clc05G10320 vs. ExPASy TrEMBL
Match: A0A1S4DSM7 (25.3 kDa vesicle transport protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484073 PE=3 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 4.1e-85
Identity = 172/234 (73.50%), Postives = 178/234 (76.07%), Query Frame = 0


Query: 1   MVGRVRDGLPIAQGIRYVNEENDDILGYKKQAEFILKEISRGTISPSKMAILMHHHCFIY 60
           MVGRVRDGLPIAQGI                                            Y
Sbjct: 6   MVGRVRDGLPIAQGIS-------------------------------------------Y 65

Query: 61  LVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINNLMKPYSFIKFDSIISNVR 120
           LVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALIN L+KPYSF+KFDSIISNVR
Sbjct: 66  LVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSIISNVR 125

Query: 121 KQYIDTRTQANLCKLNANRRQPDLDMLTCSLSEILERRRKLDMVERSMCNTNSQGASSSI 180
           KQYIDTRTQ NLCKLNANRRQPD D+L+CS SEILERRRKLD+ ERS CNTNSQG SSSI
Sbjct: 126 KQYIDTRTQVNLCKLNANRRQPDPDILSCSFSEILERRRKLDIEERSRCNTNSQGTSSSI 185

Query: 181 WGSPCLEEIVLKWTPMVVTFAVVLITLWAFFLLFDISLSHHNEFVILYNNRKLF 235
           WGSP LEEI LKWTPMVVTF VVLI LWA FLLFDISLSHHN+FVILYNNRKLF
Sbjct: 186 WGSPYLEEIGLKWTPMVVTFGVVLIVLWASFLLFDISLSHHNQFVILYNNRKLF 196

[Close]

BLAST of Clc05G10320 vs. TAIR 10
Match: AT5G52270.1 (SNARE-like superfamily protein )

HSP 1 Score: 177.6 bits (449), Expect = 1.2e-44
Identity = 93/169 (55.03%), Postives = 125/169 (73.96%), Query Frame = 0


Query: 1   MVGRVRDGLPIAQGIRYVN-EENDDILGYKKQAEFILKEISRGTISPSKMAILMHHHCFI 60
           +VGRV DGLP+AQ   YVN E+N   L YK+QAEF+LK++S+ ++   KM IL+ HH F 
Sbjct: 6   IVGRVEDGLPLAQDQTYVNQEDNTSFLLYKQQAEFLLKQVSKDSLLHPKMTILLDHHSFH 65

Query: 61  YLVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDD-ALINNLMKPYSFIKFDSIISN 120
           +LVE  +CY+ L DSSYPRKL  +YLQ+L KE  K D+ ALI  + KPYSFI+F  II  
Sbjct: 66  FLVEKKICYIALSDSSYPRKLLFNYLQNLNKELDKLDEKALIQKISKPYSFIRFGKIIGR 125

Query: 121 VRKQYIDTRTQANLCKLNANRRQPDLDMLTCSLSEILERRRKLDMVERS 168
           +RKQYIDTRTQANL KLNA R+Q +LD++T  L++I++R++ L ++  S
Sbjct: 126 IRKQYIDTRTQANLSKLNALRKQ-ELDVVTEHLNDIIQRQQILGVLRSS 173

[Close]

BLAST of Clc05G10320 vs. TAIR 10
Match: AT1G11890.1 (Synaptobrevin family protein )

HSP 1 Score: 139.0 bits (349), Expect = 4.7e-33
Identity = 76/212 (35.85%), Postives = 119/212 (56.13%), Query Frame = 0


Query: 1   MVGRVRDGLPIAQGIRYVNEENDDILGYKKQAEFILKEISRGTISPSKMAILMHHHCFIY 60
           ++ RV DGLP+A+G+    +  D  + YK+Q + + K +SRG    S+M++    + F Y
Sbjct: 6   LIARVTDGLPLAEGLDDGRDLPDSDM-YKQQVKALFKNLSRGQNDASRMSVETGPYVFHY 65

Query: 61  LVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINNLMKPYSFIKFDSIISNVR 120
           ++E  VCY+T+CD SYP+KLA  YL+DL+ EF + +   I    +PY+FIKFD+ I   +
Sbjct: 66  IIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPYAFIKFDTFIQKTK 125

Query: 121 KQYIDTRTQANLCKLNANRRQPDLDMLTCSLSEILERRRKLDMVERSMCNTNSQGASSSI 180
           K Y DTRTQ N+ KLN    +    ++T ++ E+L    KLD V        S+   S I
Sbjct: 126 KLYQDTRTQRNIAKLNDELYEVH-QIMTRNVQEVLGVGEKLDQVSEMSSRLTSE---SRI 185

Query: 181 WGSPC----LEEIVLKWTPMVVTFAVVLITLW 209
           +         + ++ KW P+ + F VV +  W
Sbjct: 186 YADKAKDLNRQALIRKWAPVAIVFGVVFLLFW 212

The following BLAST results are available for this feature:

BLAST of Clc05G10320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439222.1	3.6e-115	89.74	PREDICTED: 25.3 kDa vesicle transport protein isoform X1 [Cucumis melo]	[more]
XP_038875892.1	7.9e-115	89.83	25.3 kDa vesicle transport protein [Benincasa hispida]	[more]
XP_011651150.1	5.3e-111	87.71	25.3 kDa vesicle transport protein isoform X1 [Cucumis sativus] >KGN57371.1 hypo...	[more]
XP_022968542.1	3.0e-98	77.54	25.3 kDa vesicle transport protein isoform X1 [Cucurbita maxima]	[more]
XP_022944814.1	7.4e-97	76.27	25.3 kDa vesicle transport protein isoform X1 [Cucurbita moschata]	[more]

BLAST of Clc05G10320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AU2	6.7e-32	35.85	25.3 kDa vesicle transport protein OS=Arabidopsis thaliana OX=3702 GN=SEC22 PE=2...	[more]
Q5ZJW4	3.9e-24	32.95	Vesicle-trafficking protein SEC22b OS=Gallus gallus OX=9031 GN=SEC22B PE=2 SV=1	[more]
Q7ZV15	8.7e-24	32.37	Vesicle-trafficking protein SEC22b-A OS=Danio rerio OX=7955 GN=sec22ba PE=2 SV=1	[more]
Q7SXP0	8.7e-24	32.37	Vesicle-trafficking protein SEC22b-B OS=Danio rerio OX=7955 GN=sec22bb PE=2 SV=1	[more]
O08547	1.5e-23	32.37	Vesicle-trafficking protein SEC22b OS=Mus musculus OX=10090 GN=Sec22b PE=1 SV=3	[more]

BLAST of Clc05G10320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AYX3	1.7e-115	89.74	25.3 kDa vesicle transport protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A0A0LBE2	2.6e-111	87.71	Longin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G182070 PE=3...	[more]
A0A6J1HTS6	1.5e-98	77.54	25.3 kDa vesicle transport protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1FZ74	3.6e-97	76.27	25.3 kDa vesicle transport protein isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A1S4DSM7	4.1e-85	73.50	25.3 kDa vesicle transport protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of Clc05G10320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52270.1	1.2e-44	55.03	SNARE-like superfamily protein	[more]
AT1G11890.1	4.7e-33	35.85	Synaptobrevin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010908	Longin domain	SMART	SM01270	Longin_2	coord: 35..115 e-value: 4.9E-19 score: 79.2
IPR010908	Longin domain	PFAM	PF13774	Longin	coord: 32..113 e-value: 1.4E-18 score: 66.7
IPR010908	Longin domain	PROSITE	PS50859	LONGIN	coord: 1..116 score: 22.065561
IPR010908	Longin domain	CDD	cd14824	Longin	coord: 1..123 e-value: 1.66299E-21 score: 84.2297
None	No IPR available	GENE3D	3.30.450.50	Longin domain	coord: 1..124 e-value: 1.3E-35 score: 124.1
None	No IPR available	PANTHER	PTHR45837:SF7	SNARE-LIKE SUPERFAMILY PROTEIN	coord: 1..215
IPR044565	Vesicle-trafficking protein Sec22	PANTHER	PTHR45837	VESICLE-TRAFFICKING PROTEIN SEC22B	coord: 1..215
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 1..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G10320.2	Clc05G10320.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
biological_process	GO:0048280	vesicle fusion with Golgi apparatus
cellular_component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0012507	ER to Golgi transport vesicle membrane
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031201	SNARE complex
molecular_function	GO:0005484	SNAP receptor activity