Clc05G06450 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G06450
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	preprotein translocase subunit SECE1
Location	ClcChr05: 4742750 .. 4743289 (+)
RNA-Seq Expression	Clc05G06450
Synteny	Clc05G06450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGTTCCGATCTCCCTGAAATTTCCGACGGTACCATCCGCTTTAACCAACAGAGCCGCCTCCTGGTTCGTACCACTACGGCGGAGCTCCGCTCATCATTCTCATCCTCATTCACAACACACGATCAGACTCCCGACGATTAGGTCCAGAAGGAACATTAAGTTCTCCGCCGTCAATGCCGTGCAGGAAAGCCAAGAGAATACAGAATCCGACGGGGTGGGAGTTCAAGCAGGGCCACCGACGGAGGAGCCGAAAACGACCGACCAATCGGCAGAATCCGGCGCGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCGGAAGGTGGAGAAAGAAGGGGGCCTGATCGGCGGAGTGGCGGAGGAGATTAGGGAGATTGAGTGGCCGGCGTTCCGTAAGGTTTTGGGCACGACGGGGGTAGTGATCGGAGTTATTGCTGGCTCTAGTGTCGTTTTGCTCACTGTGAATGCCTTATTGGCAGAGTTGTCCGACCGAGTTTTCGCCGGAAAAGGAGTTCAGGATTTCTTTAGCTGA

mRNA sequence

ATGGCCGTTCCGATCTCCCTGAAATTTCCGACGGTACCATCCGCTTTAACCAACAGAGCCGCCTCCTGGTTCGTACCACTACGGCGGAGCTCCGCTCATCATTCTCATCCTCATTCACAACACACGATCAGACTCCCGACGATTAGGTCCAGAAGGAACATTAAGTTCTCCGCCGTCAATGCCGTGCAGGAAAGCCAAGAGAATACAGAATCCGACGGGGTGGGAGTTCAAGCAGGGCCACCGACGGAGGAGCCGAAAACGACCGACCAATCGGCAGAATCCGGCGCGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCGGAAGGTGGAGAAAGAAGGGGGCCTGATCGGCGGAGTGGCGGAGGAGATTAGGGAGATTGAGTGGCCGGCGTTCCGTAAGGTTTTGGGCACGACGGGGGTAGTGATCGGAGTTATTGCTGGCTCTAGTGTCGTTTTGCTCACTGTGAATGCCTTATTGGCAGAGTTGTCCGACCGAGTTTTCGCCGGAAAAGGAGTTCAGGATTTCTTTAGCTGA

Coding sequence (CDS)

ATGGCCGTTCCGATCTCCCTGAAATTTCCGACGGTACCATCCGCTTTAACCAACAGAGCCGCCTCCTGGTTCGTACCACTACGGCGGAGCTCCGCTCATCATTCTCATCCTCATTCACAACACACGATCAGACTCCCGACGATTAGGTCCAGAAGGAACATTAAGTTCTCCGCCGTCAATGCCGTGCAGGAAAGCCAAGAGAATACAGAATCCGACGGGGTGGGAGTTCAAGCAGGGCCACCGACGGAGGAGCCGAAAACGACCGACCAATCGGCAGAATCCGGCGCGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCGGAAGGTGGAGAAAGAAGGGGGCCTGATCGGCGGAGTGGCGGAGGAGATTAGGGAGATTGAGTGGCCGGCGTTCCGTAAGGTTTTGGGCACGACGGGGGTAGTGATCGGAGTTATTGCTGGCTCTAGTGTCGTTTTGCTCACTGTGAATGCCTTATTGGCAGAGTTGTCCGACCGAGTTTTCGCCGGAAAAGGAGTTCAGGATTTCTTTAGCTGA

Protein sequence

MAVPISLKFPTVPSALTNRAASWFVPLRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGAEIQEALKQRKVEKEGGLIGGVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

Homology

[Close]

BLAST of Clc05G06450 vs. NCBI nr
Match: XP_004134136.1 (preprotein translocase subunit SECE1 [Cucumis sativus] >KGN56983.1 hypothetical protein Csa_011409 [Cucumis sativus])

HSP 1 Score: 314.7 bits (805), Expect = 5.2e-82
Identity = 167/179 (93.30%), Postives = 170/179 (94.97%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSALTNRAASWFVPLRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVN 60
           MAVPISLKFPTVPS LTNR AS FVPLRRSS HHSHPHSQHTIR PTIRS RN+KFSAVN
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAVN 60

Query: 61  AVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGAEIQEALKQRKVEKEGGLIGG 120
           AVQESQENTESDGV VQAGPPTEEPKT DQSAESGANLGAEIQEALKQ+KVEKEG LIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120

Query: 121 VAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEI+EIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of Clc05G06450 vs. NCBI nr
Match: XP_008438678.1 (PREDICTED: preprotein translocase subunit SECE1 [Cucumis melo])

HSP 1 Score: 312.4 bits (799), Expect = 2.6e-81
Identity = 169/180 (93.89%), Postives = 171/180 (95.00%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSALTNRAASWFVP-LRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAV 60
           MAVPISLKFPTVPS LTNR AS FVP LR+SS HHSHPHSQHTIRLPTIRS RNIKFSAV
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLLRQSSTHHSHPHSQHTIRLPTIRSNRNIKFSAV 60

Query: 61  NAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGAEIQEALKQRKVEKEGGLIG 120
           NAVQESQENTESDGV VQAGPPTEEPKT DQSAESGANLGAEIQEALKQRKVEKEG LIG
Sbjct: 61  NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQRKVEKEGDLIG 120

Query: 121 GVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           GVAEEI+EIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180

[Close]

BLAST of Clc05G06450 vs. NCBI nr
Match: KAA0049363.1 (preprotein translocase subunit SECE1 [Cucumis melo var. makuwa] >TYK17195.1 preprotein translocase subunit SECE1 [Cucumis melo var. makuwa])

HSP 1 Score: 311.6 bits (797), Expect = 4.4e-81
Identity = 169/180 (93.89%), Postives = 170/180 (94.44%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSALTNRAASWFVP-LRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAV 60
           MAVPI LKFPTVPS LTNR AS FVP LRRSS HHSHPHSQHTIRLPTIRS RNIKFSAV
Sbjct: 1   MAVPIYLKFPTVPSTLTNRTASLFVPLLRRSSTHHSHPHSQHTIRLPTIRSNRNIKFSAV 60

Query: 61  NAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGAEIQEALKQRKVEKEGGLIG 120
           NAVQESQENTESDGV VQAGPPTEEPKT DQSAESGANLGAEIQEALKQRKVEKEG LIG
Sbjct: 61  NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQRKVEKEGDLIG 120

Query: 121 GVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           GVAEEI+EIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180

[Close]

BLAST of Clc05G06450 vs. NCBI nr
Match: XP_038896581.1 (preprotein translocase subunit SECE1 [Benincasa hispida])

HSP 1 Score: 305.1 bits (780), Expect = 4.1e-79
Identity = 164/179 (91.62%), Postives = 169/179 (94.41%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSALTNRAASWFVPLRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVN 60
           MAVPISLKFPTVPS LTNR+AS F+ LRRSSAHHSHPHSQHTIRLPTIR  R I FSAVN
Sbjct: 1   MAVPISLKFPTVPSTLTNRSASLFLSLRRSSAHHSHPHSQHTIRLPTIRFIRKINFSAVN 60

Query: 61  AVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGAEIQEALKQRKVEKEGGLIGG 120
           AVQESQENTES+GV VQAGPPTEEPKT DQSAESGANLGAEIQEALKQRKVEKEG LIGG
Sbjct: 61  AVQESQENTESNGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQRKVEKEGDLIGG 120

Query: 121 VAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEI+EIEWPAF+KVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIKEIEWPAFQKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of Clc05G06450 vs. NCBI nr
Match: XP_022979428.1 (preprotein translocase subunit SECE1 [Cucurbita maxima])

HSP 1 Score: 292.0 bits (746), Expect = 3.6e-75
Identity = 158/179 (88.27%), Postives = 164/179 (91.62%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSALTNRAASWFVPLRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVN 60
           MAVPISL+FP VPS LT+RAAS FV LRRSS+H SHPHS  TIRLP +RSRRN KFSAVN
Sbjct: 1   MAVPISLRFPAVPSTLTDRAASLFVSLRRSSSHRSHPHSHRTIRLPGVRSRRNSKFSAVN 60

Query: 61  AVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGAEIQEALKQRKVEKEGGLIGG 120
           AVQESQENTESDGV VQAGPPTEE KT DQ AESG NLGAEIQEALKQRKVEKEG LIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPTEESKTADQPAESGENLGAEIQEALKQRKVEKEGDLIGG 120

Query: 121 VAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEI++IEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of Clc05G06450 vs. ExPASy Swiss-Prot
Match: O23342 (Preprotein translocase subunit SECE1 OS=Arabidopsis thaliana OX=3702 GN=SECE1 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.9e-26
Identity = 73/141 (51.77%), Postives = 94/141 (66.67%), Query Frame = 0


Query: 43  IRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGAEI 102
           IR  T  + R        A+++ ++   S+        P EE  + +      + +GAEI
Sbjct: 37  IRTMTTSNLRKSACFVAKAIEQRRDTAGSESESEATPSPAEESGSGEDKEVEISAIGAEI 96

Query: 103 QEALKQRK-VEKEGG---LIGGVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVN 162
           + A++QRK  E+E G    + GVAEE++EIEWPAF+KVLGTTGVV+GVIAGSSVVLLTVN
Sbjct: 97  KAAMEQRKTAEEEKGKNEFLSGVAEEVKEIEWPAFQKVLGTTGVVLGVIAGSSVVLLTVN 156

Query: 163 ALLAELSDRVFAGKGVQDFFS 180
            LLAELSDRVF G+GVQDFFS
Sbjct: 157 FLLAELSDRVFIGRGVQDFFS 177

[Close]

BLAST of Clc05G06450 vs. ExPASy TrEMBL
Match: A0A0A0L5J0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146680 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.5e-82
Identity = 167/179 (93.30%), Postives = 170/179 (94.97%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSALTNRAASWFVPLRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVN 60
           MAVPISLKFPTVPS LTNR AS FVPLRRSS HHSHPHSQHTIR PTIRS RN+KFSAVN
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAVN 60

Query: 61  AVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGAEIQEALKQRKVEKEGGLIGG 120
           AVQESQENTESDGV VQAGPPTEEPKT DQSAESGANLGAEIQEALKQ+KVEKEG LIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120

Query: 121 VAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEI+EIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of Clc05G06450 vs. ExPASy TrEMBL
Match: A0A1S3AWM4 (preprotein translocase subunit SECE1 OS=Cucumis melo OX=3656 GN=LOC103483711 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.2e-81
Identity = 169/180 (93.89%), Postives = 171/180 (95.00%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSALTNRAASWFVP-LRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAV 60
           MAVPISLKFPTVPS LTNR AS FVP LR+SS HHSHPHSQHTIRLPTIRS RNIKFSAV
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLLRQSSTHHSHPHSQHTIRLPTIRSNRNIKFSAV 60

Query: 61  NAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGAEIQEALKQRKVEKEGGLIG 120
           NAVQESQENTESDGV VQAGPPTEEPKT DQSAESGANLGAEIQEALKQRKVEKEG LIG
Sbjct: 61  NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQRKVEKEGDLIG 120

Query: 121 GVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           GVAEEI+EIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180

[Close]

BLAST of Clc05G06450 vs. ExPASy TrEMBL
Match: A0A5D3D089 (Preprotein translocase subunit SECE1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00410 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.1e-81
Identity = 169/180 (93.89%), Postives = 170/180 (94.44%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSALTNRAASWFVP-LRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAV 60
           MAVPI LKFPTVPS LTNR AS FVP LRRSS HHSHPHSQHTIRLPTIRS RNIKFSAV
Sbjct: 1   MAVPIYLKFPTVPSTLTNRTASLFVPLLRRSSTHHSHPHSQHTIRLPTIRSNRNIKFSAV 60

Query: 61  NAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGAEIQEALKQRKVEKEGGLIG 120
           NAVQESQENTESDGV VQAGPPTEEPKT DQSAESGANLGAEIQEALKQRKVEKEG LIG
Sbjct: 61  NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQRKVEKEGDLIG 120

Query: 121 GVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           GVAEEI+EIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180

[Close]

BLAST of Clc05G06450 vs. ExPASy TrEMBL
Match: A0A6J1IW64 (preprotein translocase subunit SECE1 OS=Cucurbita maxima OX=3661 GN=LOC111479153 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.7e-75
Identity = 158/179 (88.27%), Postives = 164/179 (91.62%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSALTNRAASWFVPLRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVN 60
           MAVPISL+FP VPS LT+RAAS FV LRRSS+H SHPHS  TIRLP +RSRRN KFSAVN
Sbjct: 1   MAVPISLRFPAVPSTLTDRAASLFVSLRRSSSHRSHPHSHRTIRLPGVRSRRNSKFSAVN 60

Query: 61  AVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGAEIQEALKQRKVEKEGGLIGG 120
           AVQESQENTESDGV VQAGPPTEE KT DQ AESG NLGAEIQEALKQRKVEKEG LIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPTEESKTADQPAESGENLGAEIQEALKQRKVEKEGDLIGG 120

Query: 121 VAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEI++IEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of Clc05G06450 vs. ExPASy TrEMBL
Match: A0A6J1GWU8 (preprotein translocase subunit SECE1 OS=Cucurbita moschata OX=3662 GN=LOC111457882 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 8.6e-75
Identity = 158/179 (88.27%), Postives = 162/179 (90.50%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSALTNRAASWFVPLRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVN 60
           MAVPISL+FPTVPS  TNRAAS FV LRRSSA+HSHPH   TIRLP IRSRRN  FSAVN
Sbjct: 1   MAVPISLRFPTVPSTFTNRAASLFVSLRRSSAYHSHPHLHRTIRLPGIRSRRNSMFSAVN 60

Query: 61  AVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGAEIQEALKQRKVEKEGGLIGG 120
           AVQESQENTESDGV VQAGPP EE KT DQ AESG NLGAEIQEALKQRKVEKEG LIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPREESKTADQPAESGENLGAEIQEALKQRKVEKEGDLIGG 120

Query: 121 VAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEI++IEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of Clc05G06450 vs. TAIR 10
Match: AT4G14870.1 (secE/sec61-gamma protein transport protein )

HSP 1 Score: 120.6 bits (301), Expect = 1.3e-27
Identity = 73/141 (51.77%), Postives = 94/141 (66.67%), Query Frame = 0


Query: 43  IRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGAEI 102
           IR  T  + R        A+++ ++   S+        P EE  + +      + +GAEI
Sbjct: 37  IRTMTTSNLRKSACFVAKAIEQRRDTAGSESESEATPSPAEESGSGEDKEVEISAIGAEI 96

Query: 103 QEALKQRK-VEKEGG---LIGGVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVN 162
           + A++QRK  E+E G    + GVAEE++EIEWPAF+KVLGTTGVV+GVIAGSSVVLLTVN
Sbjct: 97  KAAMEQRKTAEEEKGKNEFLSGVAEEVKEIEWPAFQKVLGTTGVVLGVIAGSSVVLLTVN 156

Query: 163 ALLAELSDRVFAGKGVQDFFS 180
            LLAELSDRVF G+GVQDFFS
Sbjct: 157 FLLAELSDRVFIGRGVQDFFS 177

The following BLAST results are available for this feature:

BLAST of Clc05G06450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134136.1	5.2e-82	93.30	preprotein translocase subunit SECE1 [Cucumis sativus] >KGN56983.1 hypothetical ...	[more]
XP_008438678.1	2.6e-81	93.89	PREDICTED: preprotein translocase subunit SECE1 [Cucumis melo]	[more]
KAA0049363.1	4.4e-81	93.89	preprotein translocase subunit SECE1 [Cucumis melo var. makuwa] >TYK17195.1 prep...	[more]
XP_038896581.1	4.1e-79	91.62	preprotein translocase subunit SECE1 [Benincasa hispida]	[more]
XP_022979428.1	3.6e-75	88.27	preprotein translocase subunit SECE1 [Cucurbita maxima]	[more]

BLAST of Clc05G06450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23342	1.9e-26	51.77	Preprotein translocase subunit SECE1 OS=Arabidopsis thaliana OX=3702 GN=SECE1 PE...	[more]

BLAST of Clc05G06450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5J0	2.5e-82	93.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146680 PE=4 SV=1	[more]
A0A1S3AWM4	1.2e-81	93.89	preprotein translocase subunit SECE1 OS=Cucumis melo OX=3656 GN=LOC103483711 PE=...	[more]
A0A5D3D089	2.1e-81	93.89	Preprotein translocase subunit SECE1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1IW64	1.7e-75	88.27	preprotein translocase subunit SECE1 OS=Cucurbita maxima OX=3661 GN=LOC111479153...	[more]
A0A6J1GWU8	8.6e-75	88.27	preprotein translocase subunit SECE1 OS=Cucurbita moschata OX=3662 GN=LOC1114578...	[more]

BLAST of Clc05G06450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14870.1	1.3e-27	51.77	secE/sec61-gamma protein transport protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038379	SecE superfamily	GENE3D	1.20.5.1030	Preprotein translocase secy subunit	coord: 116..166 e-value: 2.7E-5 score: 25.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..94
None	No IPR available	PANTHER	PTHR37240	PREPROTEIN TRANSLOCASE SUBUNIT SECE1	coord: 4..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G06450.1	Clc05G06450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009306	protein secretion
biological_process	GO:0071806	protein transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008320	protein transmembrane transporter activity