Clc05G06310 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G06310
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Non-specific lipid-transfer protein-like protein
Location	ClcChr05: 4669988 .. 4671251 (+)
RNA-Seq Expression	Clc05G06310
Synteny	Clc05G06310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCACGCCATTAAAGTTCAGCCAACCAAGTCTACAGCCTCCTAAGTTTCTTAGTTTTTTCCTAATGAAGAAGTTGGTAGCCATTATAGCCGACCTCCAATGTTTGAACAGCTTAACCCCAATAGCTCCAGCAAAGAAAACTGTTAAGAAAGTAGGAAGAGTGGTTCACCAAATCAAACTCATTTCTAATTTGTCTCTTTCTTCCTTCTATTCCCTACAAAAACTACACAATTCTCCTCCAAAACTTCACAAATCAAACTCTCTTACCTTCTGAGTTCTCATCAAGTAATCTCTCTTTACCATTCCCAGAAGTTGTTTTTGTAATAGTTCTCCATAGCAGAATGGAACACACAAGGATGGTGATGGGTTTAGTTGCAATTATTGTTGCCGTGCACTGGGCAGGAGCAGCAGCACAGTCGGACTGTACGAATGTGTTGATCAGCTTGTCGCCGTGCCTGAATTACATTACAGGGAACTCCTCTACCCCATCGCAAACATGCTGCACACAGCTTGCAAGTGTTGTCCGCTCACAACCACAGTGCTTGTGCCAGGTCCTGAATGGTGGCGGCTCGTCACTTGGGGTGAATATCAACCAAACGCAGGCCCTGGCTCTGCCCCGAGCTTGCAACGTTCAGACTCCTTCTATCAGCAGCTGCAATGGTAAGCATACATATGCAAAAGAGGTTACTTATTAATAGATAGTGAGGATATGAACTATATCAATCTCTATTTAAAGTGCTAACTTGTAATACCTGAAAATTGCCAGTTGATTCTCCCGCCGGCTCTCCAGCAGGAGCACCAGACTCTTCAAACAATGTTCCTTCAGGTATAAACATAGAAAATGCTTTTAACGGCATGCTCGGTCAGTTCGTTCACACGGCCAATTAACATACCTTAACCTAACTGCTTGTGCAGGAACTGGATCTAAGACTGTTCCATCAACAGACAATGGCTCATCAGACGGAAGCTCCATCCATTTATCAAAACCTCTACTATTCTCCATCTTGTTGGCTTCTACATATGCTTCAGCTTTCAAGTTGTACTGATCATCTTATCAGTAGCCTATTTTCTACAAGTTTGGTTTATCGTTGGTTATTTATTGCATTTAGATATTTTTTAGAGTGTCCATTATTTTAAGCATCCCTTTTGTTTAGGGTGTTTTTTATCTTCATATTTTCCTCATTTGGCATTTGTTTCCAAGAACTTTGTATTGCATCAGAGATTCTTTCGAATAAAATACATGATTGTCTGCTTGTGAGTTCTA

mRNA sequence

CTTCACGCCATTAAAGTTCAGCCAACCAAGTCTACAGCCTCCTAAGTTTCTTAGTTTTTTCCTAATGAAGAAGTTGGTAGCCATTATAGCCGACCTCCAATGTTTGAACAGCTTAACCCCAATAGCTCCAGCAAAGAAAACTGTTAAGAAAGTAGGAAGAGTGGTTCACCAAATCAAACTCATTTCTAATTTGTCTCTTTCTTCCTTCTATTCCCTACAAAAACTACACAATTCTCCTCCAAAACTTCACAAATCAAACTCTCTTACCTTCTGAGTTCTCATCAAGTAATCTCTCTTTACCATTCCCAGAAGTTGTTTTTGTAATAGTTCTCCATAGCAGAATGGAACACACAAGGATGGTGATGGGTTTAGTTGCAATTATTGTTGCCGTGCACTGGGCAGGAGCAGCAGCACAGTCGGACTGTACGAATGTGTTGATCAGCTTGTCGCCGTGCCTGAATTACATTACAGGGAACTCCTCTACCCCATCGCAAACATGCTGCACACAGCTTGCAAGTGTTGTCCGCTCACAACCACAGTGCTTGTGCCAGGTCCTGAATGGTGGCGGCTCGTCACTTGGGGTGAATATCAACCAAACGCAGGCCCTGGCTCTGCCCCGAGCTTGCAACGTTCAGACTCCTTCTATCAGCAGCTGCAATGTTGATTCTCCCGCCGGCTCTCCAGCAGGAGCACCAGACTCTTCAAACAATGTTCCTTCAGGAACTGGATCTAAGACTGTTCCATCAACAGACAATGGCTCATCAGACGGAAGCTCCATCCATTTATCAAAACCTCTACTATTCTCCATCTTGTTGGCTTCTACATATGCTTCAGCTTTCAAGTTGTACTGATCATCTTATCAGTAGCCTATTTTCTACAAGTTTGGTTTATCGTTGGTTATTTATTGCATTTAGATATTTTTTAGAGTGTCCATTATTTTAAGCATCCCTTTTGTTTAGGGTGTTTTTTATCTTCATATTTTCCTCATTTGGCATTTGTTTCCAAGAACTTTGTATTGCATCAGAGATTCTTTCGAATAAAATACATGATTGTCTGCTTGTGAGTTCTA

Coding sequence (CDS)

ATGGAACACACAAGGATGGTGATGGGTTTAGTTGCAATTATTGTTGCCGTGCACTGGGCAGGAGCAGCAGCACAGTCGGACTGTACGAATGTGTTGATCAGCTTGTCGCCGTGCCTGAATTACATTACAGGGAACTCCTCTACCCCATCGCAAACATGCTGCACACAGCTTGCAAGTGTTGTCCGCTCACAACCACAGTGCTTGTGCCAGGTCCTGAATGGTGGCGGCTCGTCACTTGGGGTGAATATCAACCAAACGCAGGCCCTGGCTCTGCCCCGAGCTTGCAACGTTCAGACTCCTTCTATCAGCAGCTGCAATGTTGATTCTCCCGCCGGCTCTCCAGCAGGAGCACCAGACTCTTCAAACAATGTTCCTTCAGGAACTGGATCTAAGACTGTTCCATCAACAGACAATGGCTCATCAGACGGAAGCTCCATCCATTTATCAAAACCTCTACTATTCTCCATCTTGTTGGCTTCTACATATGCTTCAGCTTTCAAGTTGTACTGA

Protein sequence

MEHTRMVMGLVAIIVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQTCCTQLASVVRSQPQCLCQVLNGGGSSLGVNINQTQALALPRACNVQTPSISSCNVDSPAGSPAGAPDSSNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASTYASAFKLY

Homology

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BLAST of Clc05G06310 vs. NCBI nr
Match: XP_008438652.1 (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis melo] >KAA0049348.1 non-specific lipid-transfer protein-like protein [Cucumis melo var. makuwa] >TYK17210.1 non-specific lipid-transfer protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 307.8 bits (787), Expect = 5.9e-80
Identity = 158/169 (93.49%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MEHTRMVMGLVAIIVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQTCCTQLASV 60
           ME+TRMV GLVA+IVAVHWAGAAAQSDCTNVLIS++PCLNYITGNSSTPSQ+CCTQL+SV
Sbjct: 1   MEYTRMVAGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSV 60

Query: 61  VRSQPQCLCQVLNGGGSSLGVNINQTQALALPRACNVQTPSISSCNVDSPAGSPAGAPDS 120
           VRSQPQCLCQVLNGGG+SLGVNINQTQALALP+ACNVQTPS+SSCNVDSPAGSPAGAPDS
Sbjct: 61  VRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASTYASAFKLY 170
           SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLAS YASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASIYASAFKLY 169

[Close]

BLAST of Clc05G06310 vs. NCBI nr
Match: XP_038902233.1 (non-specific lipid transfer protein GPI-anchored 19 [Benincasa hispida])

HSP 1 Score: 307.0 bits (785), Expect = 1.0e-79
Identity = 160/169 (94.67%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 1   MEHTRMVMGLVAIIVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQTCCTQLASV 60
           MEHTRMVMGLV + VAVHWAG AAQSDCTNVLISLSPCLNYITGNSSTPSQTCCTQLASV
Sbjct: 1   MEHTRMVMGLVVVFVAVHWAGVAAQSDCTNVLISLSPCLNYITGNSSTPSQTCCTQLASV 60

Query: 61  VRSQPQCLCQVLNGGGSSLGVNINQTQALALPRACNVQTPSISSCNVDSPAGSPAGAPDS 120
           VRSQPQCLCQVLNGGGSSLGVNINQTQALALPRACNVQTPSISSCNVDSP  SPAGAPDS
Sbjct: 61  VRSQPQCLCQVLNGGGSSLGVNINQTQALALPRACNVQTPSISSCNVDSPTSSPAGAPDS 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASTYASAFKLY 170
           SNNVPSGTGSKTVPSTDN +SDGSSI LSKPLLFSILLASTYASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSTDNDASDGSSIQLSKPLLFSILLASTYASAFKLY 169

[Close]

BLAST of Clc05G06310 vs. NCBI nr
Match: XP_004134131.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucumis sativus] >KGN56963.1 hypothetical protein Csa_011105 [Cucumis sativus])

HSP 1 Score: 305.8 bits (782), Expect = 2.3e-79
Identity = 156/169 (92.31%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MEHTRMVMGLVAIIVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQTCCTQLASV 60
           ME+TRMV+GLVA+IVAVHWAGAAAQSDCTNVLIS++PCLNYITGNSSTPSQ+CCTQL++V
Sbjct: 1   MEYTRMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60

Query: 61  VRSQPQCLCQVLNGGGSSLGVNINQTQALALPRACNVQTPSISSCNVDSPAGSPAGAPDS 120
           VRS PQCLCQVLNGGGSSLGVNINQTQALALP+ACNVQTPS+SSCNVDSPAGSPAGAPDS
Sbjct: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASTYASAFKLY 170
           SNNVPSGTGSKTVPSTDNGSSDGSSIH+SKPLLFSILLAS YASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY 169

[Close]

BLAST of Clc05G06310 vs. NCBI nr
Match: KAG7018721.1 (Non-specific lipid transfer protein GPI-anchored 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 292.4 bits (747), Expect = 2.6e-75
Identity = 153/169 (90.53%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MEHTRMVMGLVAIIVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQTCCTQLASV 60
           MEHT+MVM LVA+IVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQ CCTQLASV
Sbjct: 1   MEHTKMVMTLVAVIVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQACCTQLASV 60

Query: 61  VRSQPQCLCQVLNGGGSSLGVNINQTQALALPRACNVQTPSISSCNVDSPAGSPAGAPDS 120
           VRSQPQCLCQVLNGGGSSLG+NINQTQALALPR CNVQTPSISSCNV +P GSPAGAP+S
Sbjct: 61  VRSQPQCLCQVLNGGGSSLGININQTQALALPRVCNVQTPSISSCNVATPTGSPAGAPES 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASTYASAFKLY 170
           SNNVPSG GSKTVPSTDN SSDG+S  LSKPLLFSILLAS YASAFKLY
Sbjct: 121 SNNVPSGPGSKTVPSTDNDSSDGTSNTLSKPLLFSILLASAYASAFKLY 169

[Close]

BLAST of Clc05G06310 vs. NCBI nr
Match: XP_022974389.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita maxima] >XP_022975120.1 non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita maxima] >XP_022975476.1 non-specific lipid-transfer protein-like protein At2g13820 isoform X1 [Cucurbita maxima])

HSP 1 Score: 292.4 bits (747), Expect = 2.6e-75
Identity = 153/169 (90.53%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MEHTRMVMGLVAIIVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQTCCTQLASV 60
           M   +MVM L+A+IVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQ CCTQLA+V
Sbjct: 1   MAQGKMVMALLAVIVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQGCCTQLATV 60

Query: 61  VRSQPQCLCQVLNGGGSSLGVNINQTQALALPRACNVQTPSISSCNVDSPAGSPAGAPDS 120
           VRSQPQCLCQVLNGGGSSLGVNINQTQALALP+ACNVQTPSISSCNV SP GSPAG+P+S
Sbjct: 61  VRSQPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSISSCNVASPTGSPAGSPES 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASTYASAFKLY 170
           SNNVPSGTGSKTVPS DN SSDGSSIHLSKPLLFSILLASTYASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSPDNNSSDGSSIHLSKPLLFSILLASTYASAFKLY 169

[Close]

BLAST of Clc05G06310 vs. ExPASy Swiss-Prot
Match: Q9LJ86 (Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=3702 GN=LTPG5 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.2e-37
Identity = 96/173 (55.49%), Postives = 116/173 (67.05%), Query Frame = 0


Query: 5   RMVMGLVAIIV---AVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQTCCTQLASVV 64
           +M MGLV + V    +     +AQS CTN LIS+SPCLNYITGNS++P+Q CC QL+ VV
Sbjct: 2   KMEMGLVFLTVFMAVMSSTMVSAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVV 61

Query: 65  RSQPQCLCQVLNGGGSSLGVNINQTQALALPRACNVQTPSISSCNVDSPAG-----SPAG 124
           +S P CLCQVLNGGGS LG+N+NQTQAL LPRACNVQTP +S CN     G     SPA 
Sbjct: 62  QSSPDCLCQVLNGGGSQLGINVNQTQALGLPRACNVQTPPVSRCNTGGGGGGSTSDSPAE 121

Query: 125 APDSSNNVPSGTGSKTVPSTDNG---SSDGSSIHLSKPLLFSILLASTYASAF 167
           +P+SS     G GSKTVP  +     SSDGSSI  S PL+ +   A +Y + F
Sbjct: 122 SPNSSG---PGNGSKTVPVGEGDGPPSSDGSSIKFSFPLI-AFFSAVSYMAIF 170

[Close]

BLAST of Clc05G06310 vs. ExPASy Swiss-Prot
Match: Q2PE59 (Non-specific lipid transfer protein GPI-anchored 26 OS=Arabidopsis thaliana OX=3702 GN=LTPG26 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.4e-30
Identity = 78/140 (55.71%), Postives = 98/140 (70.00%), Query Frame = 0


Query: 23  AAQSDCTNVLISLSPCLNYITGNSSTPSQTCCTQLASVVRSQPQCLCQVLNGGGSSLGVN 82
           +AQS CTNVLIS++PCL++IT N+S PSQ CC QLA VVR   +CLCQVL+GGGS LG+N
Sbjct: 21  SAQSSCTNVLISMAPCLSFITQNTSLPSQQCCNQLAHVVRYSSECLCQVLDGGGSQLGIN 80

Query: 83  INQTQALALPRACNVQTPSISSCNVDSPAGSPAGAPDSSNNVPSGTGSKTVPSTDNGSSD 142
           +N+TQALALP+AC+V+TP  S C+  S   S         +   G GSKTVP  +  SSD
Sbjct: 81  VNETQALALPKACHVETPPASRCHSGSSVNS---------HSEHGNGSKTVP-REKSSSD 140

Query: 143 GSSIHLSKPLLFSILLASTY 163
           G SI  S PLL +IL  ++Y
Sbjct: 141 G-SIKFSFPLL-AILFTASY 148

[Close]

BLAST of Clc05G06310 vs. ExPASy Swiss-Prot
Match: Q7EB72 (Non-specific lipid transfer protein GPI-anchored 15 OS=Arabidopsis thaliana OX=3702 GN=LTPG15 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 6.7e-26
Identity = 72/169 (42.60%), Postives = 99/169 (58.58%), Query Frame = 0


Query: 14  IVAVHWAGAAAQ--SDCTNVLISLSPCLNYITGNSSTPSQTCCTQLASVVRSQPQCLCQV 73
           +VA  W+   AQ  S C + L +LSPCL+YITGNS+TPSQ CC++L SV++S PQC+C  
Sbjct: 14  LVAALWSVTKAQPSSSCVSTLTTLSPCLSYITGNSTTPSQPCCSRLDSVIKSSPQCICSA 73

Query: 74  LNGGGSSLGVNINQTQALALPRACNVQTPSISSCNVDSPAGSPAGAPDSSNNVPS----- 133
           +N    ++G+NIN+TQAL LP ACN+QTP ++ CN  +   +   AP  +   P      
Sbjct: 74  VNSPIPNIGLNINRTQALQLPNACNIQTPPLTQCNAATGPTAQPPAPSPTEKTPDVTLTP 133

Query: 134 ----------GTGSKTVPSTDNGSS----DGSSIHLSKPLLFSILLAST 162
                     G GSKTVPS   GSS    D   +H    L+F++L+  T
Sbjct: 134 TSLPGARSGVGGGSKTVPSVGTGSSSRNVDPLPLHF---LMFAVLVVCT 179

[Close]

BLAST of Clc05G06310 vs. ExPASy Swiss-Prot
Match: F4HZB9 (Non-specific lipid transfer protein GPI-anchored 19 OS=Arabidopsis thaliana OX=3702 GN=LTPG19 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.0e-22
Identity = 71/161 (44.10%), Postives = 96/161 (59.63%), Query Frame = 0


Query: 6   MVMGLVAIIVAVHWAGAA--AQSDCTNVLISLSPCLNYITGNSSTPSQTCCTQLASVVRS 65
           M++ ++A+++A    G A   Q+ C + L SLSPCL Y+ G SS+PS +CC Q ++VV+S
Sbjct: 1   MILAILALVIATFLYGGATTVQAGCRDTLTSLSPCLYYLNGGSSSPSWSCCRQFSTVVQS 60

Query: 66  QPQCLCQVLNGGGSSL-GVNINQTQALALPRACNVQTPSISSCNVDS------PAGSPAG 125
            P+CLC V+N   SS  G   N+T AL LP ACNVQTPS S CN         PA +P G
Sbjct: 61  SPECLCSVVNSNESSFYGFKFNRTLALNLPTACNVQTPSPSLCNTGGNVPTTLPANTPVG 120

Query: 126 APDSSNNVPSGT--------GSKTVPSTDNGSSDGSSIHLS 150
           +P S+ + PSGT        GSK  P ++  SS  + I LS
Sbjct: 121 SPRSAPS-PSGTTSPANTPSGSKKFPLSNESSSKSNVIILS 160

[Close]

BLAST of Clc05G06310 vs. ExPASy Swiss-Prot
Match: Q8VYI9 (Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3702 GN=LTPG31 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.1e-11
Identity = 49/152 (32.24%), Postives = 85/152 (55.92%), Query Frame = 0


Query: 18  HWAGAAAQS-DCTNVLISLSPCLNYIT--GNSSTPSQTCCTQLASVVRSQPQCLCQVLNG 77
           H A A A S DC+ ++++++ CL++++  G  + P  TCC+ L +V+++  QCLC+    
Sbjct: 32  HHATAPAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAFK- 91

Query: 78  GGSSLGVNINQTQALALPRACNVQTPSISSCNVD-SPAGSPAGAPDSSNNVPSGTGSKTV 137
             +SLGV +N T+A  LP AC +  PSI++C +  +P+ +P  AP  +   P  T     
Sbjct: 92  SSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPSTAPGLAPGVAAAGPE-TAGFLA 151

Query: 138 PSTDNGSSDGSSIHLSKPLLFSILLASTYASA 166
           P+  +G+   S I  S   + S +L   + S+
Sbjct: 152 PNPSSGNDGSSLIPTSFTTVLSAVLFVLFFSS 181

[Close]

BLAST of Clc05G06310 vs. ExPASy TrEMBL
Match: A0A5D3D0R3 (Non-specific lipid-transfer protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00570 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.9e-80
Identity = 158/169 (93.49%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MEHTRMVMGLVAIIVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQTCCTQLASV 60
           ME+TRMV GLVA+IVAVHWAGAAAQSDCTNVLIS++PCLNYITGNSSTPSQ+CCTQL+SV
Sbjct: 1   MEYTRMVAGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSV 60

Query: 61  VRSQPQCLCQVLNGGGSSLGVNINQTQALALPRACNVQTPSISSCNVDSPAGSPAGAPDS 120
           VRSQPQCLCQVLNGGG+SLGVNINQTQALALP+ACNVQTPS+SSCNVDSPAGSPAGAPDS
Sbjct: 61  VRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASTYASAFKLY 170
           SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLAS YASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASIYASAFKLY 169

[Close]

BLAST of Clc05G06310 vs. ExPASy TrEMBL
Match: A0A1S3AX08 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucumis melo OX=3656 GN=LOC103483695 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.9e-80
Identity = 158/169 (93.49%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MEHTRMVMGLVAIIVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQTCCTQLASV 60
           ME+TRMV GLVA+IVAVHWAGAAAQSDCTNVLIS++PCLNYITGNSSTPSQ+CCTQL+SV
Sbjct: 1   MEYTRMVAGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSV 60

Query: 61  VRSQPQCLCQVLNGGGSSLGVNINQTQALALPRACNVQTPSISSCNVDSPAGSPAGAPDS 120
           VRSQPQCLCQVLNGGG+SLGVNINQTQALALP+ACNVQTPS+SSCNVDSPAGSPAGAPDS
Sbjct: 61  VRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASTYASAFKLY 170
           SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLAS YASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASIYASAFKLY 169

[Close]

BLAST of Clc05G06310 vs. ExPASy TrEMBL
Match: A0A0A0L5G6 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G146490 PE=3 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.1e-79
Identity = 156/169 (92.31%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MEHTRMVMGLVAIIVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQTCCTQLASV 60
           ME+TRMV+GLVA+IVAVHWAGAAAQSDCTNVLIS++PCLNYITGNSSTPSQ+CCTQL++V
Sbjct: 1   MEYTRMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60

Query: 61  VRSQPQCLCQVLNGGGSSLGVNINQTQALALPRACNVQTPSISSCNVDSPAGSPAGAPDS 120
           VRS PQCLCQVLNGGGSSLGVNINQTQALALP+ACNVQTPS+SSCNVDSPAGSPAGAPDS
Sbjct: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASTYASAFKLY 170
           SNNVPSGTGSKTVPSTDNGSSDGSSIH+SKPLLFSILLAS YASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY 169

[Close]

BLAST of Clc05G06310 vs. ExPASy TrEMBL
Match: A0A6J1IEC3 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita maxima OX=3661 GN=LOC111474858 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.3e-75
Identity = 153/169 (90.53%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MEHTRMVMGLVAIIVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQTCCTQLASV 60
           M   +MVM L+A+IVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQ CCTQLA+V
Sbjct: 1   MAQGKMVMALLAVIVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQGCCTQLATV 60

Query: 61  VRSQPQCLCQVLNGGGSSLGVNINQTQALALPRACNVQTPSISSCNVDSPAGSPAGAPDS 120
           VRSQPQCLCQVLNGGGSSLGVNINQTQALALP+ACNVQTPSISSCNV SP GSPAG+P+S
Sbjct: 61  VRSQPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSISSCNVASPTGSPAGSPES 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASTYASAFKLY 170
           SNNVPSGTGSKTVPS DN SSDGSSIHLSKPLLFSILLASTYASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSPDNNSSDGSSIHLSKPLLFSILLASTYASAFKLY 169

[Close]

BLAST of Clc05G06310 vs. ExPASy TrEMBL
Match: A0A6J1GV30 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita moschata OX=3662 GN=LOC111457447 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.6e-75
Identity = 151/169 (89.35%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MEHTRMVMGLVAIIVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQTCCTQLASV 60
           MEHT+MVM LVA+IVA+HWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQ CCTQLASV
Sbjct: 1   MEHTKMVMTLVAVIVALHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQACCTQLASV 60

Query: 61  VRSQPQCLCQVLNGGGSSLGVNINQTQALALPRACNVQTPSISSCNVDSPAGSPAGAPDS 120
           VRSQPQCLCQVLNGGGSSLG+NINQTQALALPR CNVQTPSISSCNV +P GSPAGAP+S
Sbjct: 61  VRSQPQCLCQVLNGGGSSLGININQTQALALPRVCNVQTPSISSCNVATPTGSPAGAPES 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASTYASAFKLY 170
           SNN+PSGTGSKTVPSTDN SSDG+S  +SKPLLFSILLAS YASAFKLY
Sbjct: 121 SNNIPSGTGSKTVPSTDNDSSDGTSNTVSKPLLFSILLASAYASAFKLY 169

[Close]

BLAST of Clc05G06310 vs. TAIR 10
Match: AT3G22600.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 156.8 bits (395), Expect = 1.6e-38
Identity = 96/173 (55.49%), Postives = 116/173 (67.05%), Query Frame = 0


Query: 5   RMVMGLVAIIV---AVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQTCCTQLASVV 64
           +M MGLV + V    +     +AQS CTN LIS+SPCLNYITGNS++P+Q CC QL+ VV
Sbjct: 2   KMEMGLVFLTVFMAVMSSTMVSAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVV 61

Query: 65  RSQPQCLCQVLNGGGSSLGVNINQTQALALPRACNVQTPSISSCNVDSPAG-----SPAG 124
           +S P CLCQVLNGGGS LG+N+NQTQAL LPRACNVQTP +S CN     G     SPA 
Sbjct: 62  QSSPDCLCQVLNGGGSQLGINVNQTQALGLPRACNVQTPPVSRCNTGGGGGGSTSDSPAE 121

Query: 125 APDSSNNVPSGTGSKTVPSTDNG---SSDGSSIHLSKPLLFSILLASTYASAF 167
           +P+SS     G GSKTVP  +     SSDGSSI  S PL+ +   A +Y + F
Sbjct: 122 SPNSSG---PGNGSKTVPVGEGDGPPSSDGSSIKFSFPLI-AFFSAVSYMAIF 170

[Close]

BLAST of Clc05G06310 vs. TAIR 10
Match: AT4G14815.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 132.9 bits (333), Expect = 2.4e-31
Identity = 78/140 (55.71%), Postives = 98/140 (70.00%), Query Frame = 0


Query: 23  AAQSDCTNVLISLSPCLNYITGNSSTPSQTCCTQLASVVRSQPQCLCQVLNGGGSSLGVN 82
           +AQS CTNVLIS++PCL++IT N+S PSQ CC QLA VVR   +CLCQVL+GGGS LG+N
Sbjct: 21  SAQSSCTNVLISMAPCLSFITQNTSLPSQQCCNQLAHVVRYSSECLCQVLDGGGSQLGIN 80

Query: 83  INQTQALALPRACNVQTPSISSCNVDSPAGSPAGAPDSSNNVPSGTGSKTVPSTDNGSSD 142
           +N+TQALALP+AC+V+TP  S C+  S   S         +   G GSKTVP  +  SSD
Sbjct: 81  VNETQALALPKACHVETPPASRCHSGSSVNS---------HSEHGNGSKTVP-REKSSSD 140

Query: 143 GSSIHLSKPLLFSILLASTY 163
           G SI  S PLL +IL  ++Y
Sbjct: 141 G-SIKFSFPLL-AILFTASY 148

[Close]

BLAST of Clc05G06310 vs. TAIR 10
Match: AT2G48130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 118.6 bits (296), Expect = 4.8e-27
Identity = 72/169 (42.60%), Postives = 99/169 (58.58%), Query Frame = 0


Query: 14  IVAVHWAGAAAQ--SDCTNVLISLSPCLNYITGNSSTPSQTCCTQLASVVRSQPQCLCQV 73
           +VA  W+   AQ  S C + L +LSPCL+YITGNS+TPSQ CC++L SV++S PQC+C  
Sbjct: 14  LVAALWSVTKAQPSSSCVSTLTTLSPCLSYITGNSTTPSQPCCSRLDSVIKSSPQCICSA 73

Query: 74  LNGGGSSLGVNINQTQALALPRACNVQTPSISSCNVDSPAGSPAGAPDSSNNVPS----- 133
           +N    ++G+NIN+TQAL LP ACN+QTP ++ CN  +   +   AP  +   P      
Sbjct: 74  VNSPIPNIGLNINRTQALQLPNACNIQTPPLTQCNAATGPTAQPPAPSPTEKTPDVTLTP 133

Query: 134 ----------GTGSKTVPSTDNGSS----DGSSIHLSKPLLFSILLAST 162
                     G GSKTVPS   GSS    D   +H    L+F++L+  T
Sbjct: 134 TSLPGARSGVGGGSKTVPSVGTGSSSRNVDPLPLHF---LMFAVLVVCT 179

[Close]

BLAST of Clc05G06310 vs. TAIR 10
Match: AT1G03103.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-23
Identity = 71/161 (44.10%), Postives = 96/161 (59.63%), Query Frame = 0


Query: 6   MVMGLVAIIVAVHWAGAA--AQSDCTNVLISLSPCLNYITGNSSTPSQTCCTQLASVVRS 65
           M++ ++A+++A    G A   Q+ C + L SLSPCL Y+ G SS+PS +CC Q ++VV+S
Sbjct: 1   MILAILALVIATFLYGGATTVQAGCRDTLTSLSPCLYYLNGGSSSPSWSCCRQFSTVVQS 60

Query: 66  QPQCLCQVLNGGGSSL-GVNINQTQALALPRACNVQTPSISSCNVDS------PAGSPAG 125
            P+CLC V+N   SS  G   N+T AL LP ACNVQTPS S CN         PA +P G
Sbjct: 61  SPECLCSVVNSNESSFYGFKFNRTLALNLPTACNVQTPSPSLCNTGGNVPTTLPANTPVG 120

Query: 126 APDSSNNVPSGT--------GSKTVPSTDNGSSDGSSIHLS 150
           +P S+ + PSGT        GSK  P ++  SS  + I LS
Sbjct: 121 SPRSAPS-PSGTTSPANTPSGSKKFPLSNESSSKSNVIILS 160

[Close]

BLAST of Clc05G06310 vs. TAIR 10
Match: AT5G64080.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 4.3e-12
Identity = 49/152 (32.24%), Postives = 85/152 (55.92%), Query Frame = 0


Query: 18  HWAGAAAQS-DCTNVLISLSPCLNYIT--GNSSTPSQTCCTQLASVVRSQPQCLCQVLNG 77
           H A A A S DC+ ++++++ CL++++  G  + P  TCC+ L +V+++  QCLC+    
Sbjct: 32  HHATAPAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAFK- 91

Query: 78  GGSSLGVNINQTQALALPRACNVQTPSISSCNVD-SPAGSPAGAPDSSNNVPSGTGSKTV 137
             +SLGV +N T+A  LP AC +  PSI++C +  +P+ +P  AP  +   P  T     
Sbjct: 92  SSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPSTAPGLAPGVAAAGPE-TAGFLA 151

Query: 138 PSTDNGSSDGSSIHLSKPLLFSILLASTYASA 166
           P+  +G+   S I  S   + S +L   + S+
Sbjct: 152 PNPSSGNDGSSLIPTSFTTVLSAVLFVLFFSS 181

The following BLAST results are available for this feature:

BLAST of Clc05G06310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438652.1	5.9e-80	93.49	PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis m...	[more]
XP_038902233.1	1.0e-79	94.67	non-specific lipid transfer protein GPI-anchored 19 [Benincasa hispida]	[more]
XP_004134131.1	2.3e-79	92.31	non-specific lipid-transfer protein-like protein At2g13820 [Cucumis sativus] >KG...	[more]
KAG7018721.1	2.6e-75	90.53	Non-specific lipid transfer protein GPI-anchored 2, partial [Cucurbita argyrospe...	[more]
XP_022974389.1	2.6e-75	90.53	non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita maxima] >X...	[more]

BLAST of Clc05G06310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LJ86	2.2e-37	55.49	Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=37...	[more]
Q2PE59	3.4e-30	55.71	Non-specific lipid transfer protein GPI-anchored 26 OS=Arabidopsis thaliana OX=3...	[more]
Q7EB72	6.7e-26	42.60	Non-specific lipid transfer protein GPI-anchored 15 OS=Arabidopsis thaliana OX=3...	[more]
F4HZB9	2.0e-22	44.10	Non-specific lipid transfer protein GPI-anchored 19 OS=Arabidopsis thaliana OX=3...	[more]
Q8VYI9	6.1e-11	32.24	Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of Clc05G06310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D0R3	2.9e-80	93.49	Non-specific lipid-transfer protein-like protein OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3AX08	2.9e-80	93.49	non-specific lipid-transfer protein-like protein At2g13820 OS=Cucumis melo OX=36...	[more]
A0A0A0L5G6	1.1e-79	92.31	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G146490 PE=3 SV...	[more]
A0A6J1IEC3	1.3e-75	90.53	non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita maxima O...	[more]
A0A6J1GV30	1.6e-75	89.35	non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita moschata...	[more]

BLAST of Clc05G06310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22600.1	1.6e-38	55.49	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G14815.1	2.4e-31	55.71	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G48130.1	4.8e-27	42.60	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G03103.1	1.4e-23	44.10	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G64080.1	4.3e-12	32.24	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 48..62 score: 24.62 coord: 82..99 score: 32.22 coord: 27..43 score: 36.74
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 28..105 e-value: 6.2E-10 score: 49.0
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 12..105 e-value: 1.2E-18 score: 67.0
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 25..102 e-value: 3.0E-19 score: 70.7
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 27..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..142
None	No IPR available	PANTHER	PTHR33044:SF180	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 7..163
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 35..97 e-value: 1.06811E-24 score: 89.023
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 7..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G06310.1	Clc05G06310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0008289	lipid binding