Clc05G06300 (gene) Watermelon (cordophanus) v2

Overview
NameClc05G06300
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionNon-specific lipid-transfer protein-like protein
LocationClcChr05: 4667627 .. 4669149 (-)
RNA-Seq ExpressionClc05G06300
SyntenyClc05G06300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGTAGTATCAAAACACGCTTATAATCTGGATTATTAGAATAAGAATTAGAGAAATAGTTGGAAGTTTAAATCTCTATACTCTACTTTTAAGTTTCAGTTAAGTTTGAACTCTGAAATTAAAGCTGTAATCAATTTGAGCTCTTCTGCTGAAGCCTCAATTGCAGCATTTTATCTTCTGGAAGTGGTTGCTGAGGTAGTTGAGCTTCAAAACCAAACTCATGACCCACTTTAACCCTCTTCTATAAATTCCTTCATCATCATTTCCTCTTCACTTCAACAAACTTTCAAATCCAAAGCATCCAAACATTATCATACACTCCCACAAGAACTATCCCAATGGCGCCATTTGTTCCCCTCACCGGAACAATCCCGCTGCTGCTCGTTCTAGCTTTTACAGTAGCAATTCTTCCAGTTTCGGGTCAGATCAATACACCCTGCAGTCCCTCCATGATCGCCCGCTTCACTCCTTGTATGAACTTGCTTACAAACAGCACAGCAAATGGCACTTCACCAACTGCAGACTGTTGTGATTATCTAAGGTCACTCACTGGCTCAGGAATGGACTGTCTCTGCCTCATTGTCACTGCAAGCGTTCCCTTCCAACTACCCATCAACCGATCGTTGGCAATTTCACTTCCTCGAGCCTGTAACATGCCCGGCGTCCCCGTCCAATGCAGAGGTACAACTCCAAATTTTCATGAAAGTTGTTCATTTTGATCCATTTCTCGACGAGTAGGTTGATAACTTGATGTTTGTTTTGGTTCCTTTTGCAGCTTCTGCAGCTCCCATTCCAGCTCCAGGTAGTATGCTTTTCTTTAAAGAATGACAAGACTGATGTTTTTATTTAGTGAAAGATAATGACAGTTCTTTTTTTTTTTTTTTTTGTTTTTTTGGTATGTTTTGATAGGTCCTATCCCACTTGGTCCAGCTCTTCCTCCTGAAGCTTCACCATCTCCACAAGGTACTGTGATATATTTTACTCTTGGCTTTGAGTTTGAAAATTTTGTGTTGATTTCTCCAAATGCTATGGCTTTCTTGATTAGGTTCTGGCATCCTTCAACCCGCTACGCCTGCACAGTCACCTGAAGCGGACACCACAGAGTTTATAACTCCGCCTTCAAATGGGGGAGGATCTAAAACTCCAACCTCGACAACCGATGCCGGCAATGGGATTTCACCTGAGCTGACTCCGTCATCTGGCACCGTACCATCTTACAACCTCTATCTTCTGGTGTTGGCATTAAGCCGTGTGGTTTTGAAGCTATACTAGATTGTTTATCCAGAATCTGTCAATTTATTGCTTCCAAGAAAAAAAAAATCGATTTATTTGTAAATTGTGGGAGTTATTCTTTTGAGTGGAATAGTTTGATGAGGTTTTTGGGCTTTGAGTTGGTTGAGAAGAGTGATTGTTTGTATAATATATACATTAAAAGCAGACATACAGAGAGTTGTTCGTTACTTTTTCCTTTTGTTGTAATTTTTTTGAATGCGATAATAATTTAGTCTTCATTTTTCATTTTA

mRNA sequence

CTTGTAGTATCAAAACACGCTTATAATCTGGATTATTAGAATAAGAATTAGAGAAATAGTTGGAAGTTTAAATCTCTATACTCTACTTTTAAGTTTCAGTTAAGTTTGAACTCTGAAATTAAAGCTGTAATCAATTTGAGCTCTTCTGCTGAAGCCTCAATTGCAGCATTTTATCTTCTGGAAGTGGTTGCTGAGGTAGTTGAGCTTCAAAACCAAACTCATGACCCACTTTAACCCTCTTCTATAAATTCCTTCATCATCATTTCCTCTTCACTTCAACAAACTTTCAAATCCAAAGCATCCAAACATTATCATACACTCCCACAAGAACTATCCCAATGGCGCCATTTGTTCCCCTCACCGGAACAATCCCGCTGCTGCTCGTTCTAGCTTTTACAGTAGCAATTCTTCCAGTTTCGGGTCAGATCAATACACCCTGCAGTCCCTCCATGATCGCCCGCTTCACTCCTTGTATGAACTTGCTTACAAACAGCACAGCAAATGGCACTTCACCAACTGCAGACTGTTGTGATTATCTAAGGTCACTCACTGGCTCAGGAATGGACTGTCTCTGCCTCATTGTCACTGCAAGCGTTCCCTTCCAACTACCCATCAACCGATCGTTGGCAATTTCACTTCCTCGAGCCTGTAACATGCCCGGCGTCCCCGTCCAATGCAGAGCTTCTGCAGCTCCCATTCCAGCTCCAGGTCCTATCCCACTTGGTCCAGCTCTTCCTCCTGAAGCTTCACCATCTCCACAAGGTTCTGGCATCCTTCAACCCGCTACGCCTGCACAGTCACCTGAAGCGGACACCACAGAGTTTATAACTCCGCCTTCAAATGGGGGAGGATCTAAAACTCCAACCTCGACAACCGATGCCGGCAATGGGATTTCACCTGAGCTGACTCCGTCATCTGGCACCGTACCATCTTACAACCTCTATCTTCTGGTGTTGGCATTAAGCCGTGTGGTTTTGAAGCTATACTAGATTGTTTATCCAGAATCTGTCAATTTATTGCTTCCAAGAAAAAAAAAATCGATTTATTTGTAAATTGTGGGAGTTATTCTTTTGAGTGGAATAGTTTGATGAGGTTTTTGGGCTTTGAGTTGGTTGAGAAGAGTGATTGTTTGTATAATATATACATTAAAAGCAGACATACAGAGAGTTGTTCGTTACTTTTTCCTTTTGTTGTAATTTTTTTGAATGCGATAATAATTTAGTCTTCATTTTTCATTTTA

Coding sequence (CDS)

ATGGCGCCATTTGTTCCCCTCACCGGAACAATCCCGCTGCTGCTCGTTCTAGCTTTTACAGTAGCAATTCTTCCAGTTTCGGGTCAGATCAATACACCCTGCAGTCCCTCCATGATCGCCCGCTTCACTCCTTGTATGAACTTGCTTACAAACAGCACAGCAAATGGCACTTCACCAACTGCAGACTGTTGTGATTATCTAAGGTCACTCACTGGCTCAGGAATGGACTGTCTCTGCCTCATTGTCACTGCAAGCGTTCCCTTCCAACTACCCATCAACCGATCGTTGGCAATTTCACTTCCTCGAGCCTGTAACATGCCCGGCGTCCCCGTCCAATGCAGAGCTTCTGCAGCTCCCATTCCAGCTCCAGGTCCTATCCCACTTGGTCCAGCTCTTCCTCCTGAAGCTTCACCATCTCCACAAGGTTCTGGCATCCTTCAACCCGCTACGCCTGCACAGTCACCTGAAGCGGACACCACAGAGTTTATAACTCCGCCTTCAAATGGGGGAGGATCTAAAACTCCAACCTCGACAACCGATGCCGGCAATGGGATTTCACCTGAGCTGACTCCGTCATCTGGCACCGTACCATCTTACAACCTCTATCTTCTGGTGTTGGCATTAAGCCGTGTGGTTTTGAAGCTATACTAG

Protein sequence

MAPFVPLTGTIPLLLVLAFTVAILPVSGQINTPCSPSMIARFTPCMNLLTNSTANGTSPTADCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPIPAPGPIPLGPALPPEASPSPQGSGILQPATPAQSPEADTTEFITPPSNGGGSKTPTSTTDAGNGISPELTPSSGTVPSYNLYLLVLALSRVVLKLY
Homology
BLAST of Clc05G06300 vs. NCBI nr
Match: XP_038875696.1 (non-specific lipid transfer protein GPI-anchored 19-like [Benincasa hispida])

HSP 1 Score: 359.8 bits (922), Expect = 1.7e-95
Identity = 189/216 (87.50%), Postives = 198/216 (91.67%), Query Frame = 0

Query: 1   MAPFVPLTGTIPLLLVLAFTVAILPVSGQINTPCSPSMIARFTPCMNLLTNSTANGTSPT 60
           MAPFVPL  TIP LL LAF V ILPVSGQINTPC PSMIARFTPCMNLLTNST+NGTSPT
Sbjct: 42  MAPFVPLARTIP-LLALAFAVVILPVSGQINTPCRPSMIARFTPCMNLLTNSTSNGTSPT 101

Query: 61  ADCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPI 120
           ADCCDYLRSLTGSGMDCLCLIVTAS+PFQLPINRSLAISLPRACNMPGVPVQCRAS API
Sbjct: 102 ADCCDYLRSLTGSGMDCLCLIVTASIPFQLPINRSLAISLPRACNMPGVPVQCRASVAPI 161

Query: 121 PAPGPIPLGPALPPEASPSPQGSGILQPATPAQSPEADTTEFITPPSNGGGSKTPTSTTD 180
           PAPGPIPLGPAL PEASP+PQGSGI QP TP QSPEADTT F+TPPS GGG++ PTSTTD
Sbjct: 162 PAPGPIPLGPALSPEASPTPQGSGIPQPVTPTQSPEADTTGFLTPPSTGGGAENPTSTTD 221

Query: 181 AGNGISPELTPSSGTVPSYNLYLLVLALSRVVLKLY 217
           AGNGI P+LTPSSGT+PSYN YLLVLALS V+LKLY
Sbjct: 222 AGNGILPDLTPSSGTIPSYNFYLLVLALSCVILKLY 256

BLAST of Clc05G06300 vs. NCBI nr
Match: TYK17211.1 (non-specific lipid-transfer protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 349.4 bits (895), Expect = 2.3e-92
Identity = 188/215 (87.44%), Postives = 196/215 (91.16%), Query Frame = 0

Query: 1   MAPFVPLTGTIPLLLVLAFTVAILPVSGQINTPCSPSMIARFTPCMNLLTNSTANGTSPT 60
           MA FV LT TIPLL V AF V ILPV GQIN+PCSPS+IARFTPCMNLLTNSTANGTSPT
Sbjct: 1   MASFVLLTRTIPLLAV-AFAVVILPVLGQINSPCSPSIIARFTPCMNLLTNSTANGTSPT 60

Query: 61  ADCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPI 120
           +DCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPI
Sbjct: 61  SDCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPI 120

Query: 121 PAPGPIPLGPALPPEASPSPQGSGILQPATPAQSPEADTTEFITPPSNGGGSKTPTSTTD 180
           PAPGPIPLGPAL PEASPSPQGSGI QP TPAQSPE DTTEF+TPPS  GG++TPTSTTD
Sbjct: 121 PAPGPIPLGPALSPEASPSPQGSGIPQPVTPAQSPETDTTEFLTPPSTEGGAETPTSTTD 180

Query: 181 AGNGISPELTPSSGTVPSYNLYLLVLALSRVVLKL 216
           AGNGISP+LTPSS T+PSYN YLL LALS V LKL
Sbjct: 181 AGNGISPDLTPSSSTMPSYNFYLLALALSCVALKL 214

BLAST of Clc05G06300 vs. NCBI nr
Match: XP_004134438.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucumis sativus] >KGN56962.1 hypothetical protein Csa_010732 [Cucumis sativus])

HSP 1 Score: 346.3 bits (887), Expect = 1.9e-91
Identity = 186/215 (86.51%), Postives = 195/215 (90.70%), Query Frame = 0

Query: 1   MAPFVPLTGTIPLLLVLAFTVAILPVSGQINTPCSPSMIARFTPCMNLLTNSTANGTSPT 60
           MA FV LT TIPLL V AF V ILP SGQIN+PCSPS+IARFTPCMNLLTNSTANGTSPT
Sbjct: 1   MASFVLLTRTIPLLAV-AFAVVILPASGQINSPCSPSIIARFTPCMNLLTNSTANGTSPT 60

Query: 61  ADCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPI 120
           ADCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLP+ACNMPGVPVQCRASAAPI
Sbjct: 61  ADCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLPQACNMPGVPVQCRASAAPI 120

Query: 121 PAPGPIPLGPALPPEASPSPQGSGILQPATPAQSPEADTTEFITPPSNGGGSKTPTSTTD 180
           PAPGPIPLGPAL PEASPSPQGSGI QP TPAQSPE DTTEF+TPPS  GG++TPTSTTD
Sbjct: 121 PAPGPIPLGPALSPEASPSPQGSGIPQPVTPAQSPETDTTEFLTPPSTEGGAETPTSTTD 180

Query: 181 AGNGISPELTPSSGTVPSYNLYLLVLALSRVVLKL 216
           AGNGISP+LTPSS T+PSYN +LL LALS   LKL
Sbjct: 181 AGNGISPDLTPSSSTMPSYNFHLLALALSCAALKL 214

BLAST of Clc05G06300 vs. NCBI nr
Match: XP_008438651.1 (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis melo])

HSP 1 Score: 346.3 bits (887), Expect = 1.9e-91
Identity = 187/215 (86.98%), Postives = 195/215 (90.70%), Query Frame = 0

Query: 1   MAPFVPLTGTIPLLLVLAFTVAILPVSGQINTPCSPSMIARFTPCMNLLTNSTANGTSPT 60
           MA FV LT TIPLL V AF V ILPV GQIN+PCSPS+IARFTPCMNLLTNSTANGTSPT
Sbjct: 9   MASFVLLTRTIPLLAV-AFAVVILPVLGQINSPCSPSIIARFTPCMNLLTNSTANGTSPT 68

Query: 61  ADCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPI 120
           +DCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPI
Sbjct: 69  SDCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPI 128

Query: 121 PAPGPIPLGPALPPEASPSPQGSGILQPATPAQSPEADTTEFITPPSNGGGSKTPTSTTD 180
           PAPGPIPLG AL PEASPSPQGSGI QP TPAQSPE DTTEF+TPPS  GG++TPTSTTD
Sbjct: 129 PAPGPIPLGSALSPEASPSPQGSGIPQPVTPAQSPETDTTEFLTPPSTEGGAETPTSTTD 188

Query: 181 AGNGISPELTPSSGTVPSYNLYLLVLALSRVVLKL 216
           AGNGISP+LTPSS T+PSYN YLL LALS V LKL
Sbjct: 189 AGNGISPDLTPSSSTMPSYNFYLLALALSCVALKL 222

BLAST of Clc05G06300 vs. NCBI nr
Match: XP_023527187.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.9 bits (847), Expect = 8.4e-87
Identity = 178/216 (82.41%), Postives = 192/216 (88.89%), Query Frame = 0

Query: 1   MAPFVPLTGTIPLLLVLAFTVAILPVSGQINTPCSPSMIARFTPCMNLLTNSTANGTSPT 60
           M PFVPL  TIP +L LAF VAILPV GQIN+PC+PSMIARFTPCMNLLTNST NGTSPT
Sbjct: 1   MEPFVPLARTIP-VLALAFAVAILPVLGQINSPCNPSMIARFTPCMNLLTNSTENGTSPT 60

Query: 61  ADCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPI 120
           A CCDYLRSLTG+GMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPI
Sbjct: 61  ASCCDYLRSLTGTGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPI 120

Query: 121 PAPGPIPLGPALPPEASPSPQGSGILQPATPAQSPEADTTEFITPPSNGGGSKTPTSTTD 180
           PAPGPI LGPAL P+ASP+P GSG+ QPATPAQSPEA+TTEF+TPP      +TPT+TTD
Sbjct: 121 PAPGPISLGPALSPDASPTPLGSGLPQPATPAQSPEAETTEFLTPP------ETPTTTTD 180

Query: 181 AGNGISPELTPSSGTVPSYNLYLLVLALSRVVLKLY 217
           AG GISPELTPSS T+P+YN YLLVLALS +V KLY
Sbjct: 181 AGTGISPELTPSSATIPTYNFYLLVLALSCMVWKLY 209

BLAST of Clc05G06300 vs. ExPASy Swiss-Prot
Match: Q9LJ85 (Non-specific lipid transfer protein GPI-anchored 20 OS=Arabidopsis thaliana OX=3702 GN=LTPG20 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.3e-37
Identity = 102/206 (49.51%), Postives = 130/206 (63.11%), Query Frame = 0

Query: 14  LLVLAFTVAILPVSGQIN--TPCSPSMIARFTPCMNLLTNSTANGTSPTADCCDYLRSLT 73
           L+V    V  LP+ GQ    + C+PSM+   +PCM  +TNS++NGTSP++DCC+ LRSLT
Sbjct: 7   LVVAMIAVLALPIRGQQQPLSQCTPSMMTTVSPCMGFITNSSSNGTSPSSDCCNSLRSLT 66

Query: 74  GSGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPIPAPGPIPLGPA 133
             GM CLCLIVT +VPF +PINR+ A+SLPRACNMP VP+QC+A+ AP  APGP      
Sbjct: 67  TGGMGCLCLIVTGTVPFNIPINRTTAVSLPRACNMPRVPLQCQANIAPAAAPGP---AAT 126

Query: 134 LPPEASPSPQGSGILQPATP-AQSPEADTTEFITPPSNGGGSKTPTSTTDAGNGISPELT 193
             P  SP P+   I+   TP AQ+P++DTT   TP  +GG    PTS  D G+   P  T
Sbjct: 127 FGPSMSPGPETDPIVPEPTPAAQTPQSDTTRPFTPSVDGG---APTS-DDGGSTSRPSET 186

Query: 194 PSSGTVPSYNLYLLVLALSRVVLKLY 217
           PSS    S +L    +AL  V LK Y
Sbjct: 187 PSSAYALSPSLLFFSIAL--VALKFY 203

BLAST of Clc05G06300 vs. ExPASy Swiss-Prot
Match: Q1G2Y5 (Non-specific lipid transfer protein GPI-anchored 21 OS=Arabidopsis thaliana OX=3702 GN=LTPG21 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 6.6e-34
Identity = 90/193 (46.63%), Postives = 118/193 (61.14%), Query Frame = 0

Query: 26  VSGQINTPCSPSMIARFTPCMNLLTNSTANGTSPTADCCDYLRSLTGSGMDCLCLIVTAS 85
           +  QINTPCSPSM++  T C + L   T  G+ PT+DCC  L+SLTG+GMDCLCLIVTA 
Sbjct: 25  ILAQINTPCSPSMLSSVTGCTSFL---TGGGSFPTSDCCGALKSLTGTGMDCLCLIVTAG 84

Query: 86  VPFQLPINRSLAISLPRACNMPGVPVQCRASAAPIPAPGPIPLGPALPPEASPS--PQGS 145
           VP  +PINR+LAISLPRAC +PGVPVQC+ASAAP+P PGP   GP   P  S +  P+GS
Sbjct: 85  VPISIPINRTLAISLPRACGIPGVPVQCKASAAPLPTPGPASFGPTTSPTDSQTSDPEGS 144

Query: 146 GILQPATPAQSPEADTTEFITPPSNGGGSKTPTSTTDAGNGISPELTPSSGTVPSYNLYL 205
              +P T   + +    + ++   NGG             G +P   PSS    S++L L
Sbjct: 145 ASFRPPTSPTTSQTPNDKDLSGSGNGGDPM----------GFAPP-PPSSSPSSSHSLKL 203

Query: 206 --LVLALSRVVLK 215
             L+ A +  ++K
Sbjct: 205 SYLLFAFAFTIIK 203

BLAST of Clc05G06300 vs. ExPASy Swiss-Prot
Match: Q94AX3 (Non-specific lipid transfer protein GPI-anchored 16 OS=Arabidopsis thaliana OX=3702 GN=LTPG16 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.4e-28
Identity = 82/206 (39.81%), Postives = 118/206 (57.28%), Query Frame = 0

Query: 11  IPLLLVLAFTVAILPVSGQINTPCSPSMIARFTPCMNLLTNSTANGTSPTADCCDYLRSL 70
           + L++V+  +  +     QI+TPC+ SMI+ FTPC+N +T S+    +PTA CCD L++L
Sbjct: 4   LTLIVVMMSSFMLGGQGQQISTPCTSSMISTFTPCLNFITGSSGGSVTPTAGCCDSLKTL 63

Query: 71  TGSGMDCLCLIVTASVPFQLP-INRSLAISLPRACNMPGVPVQCRASAAPIPAPGPIPLG 130
           T +GM C CLI+TA+VP     INR+LA++LPRAC M GVP+QC+A+  P+PAPG +P  
Sbjct: 64  TNTGMGCACLILTANVPLPTGFINRTLALALPRACKMGGVPIQCQAAGTPLPAPGQVPFL 123

Query: 131 PALPPEASPSPQGSGILQPATPAQSPEADTTEFITPPSNGGGSKTPTSTTDAGNGISPEL 190
            A PP+ S    G+      TP Q+P  D     TP     G  T +        + P  
Sbjct: 124 IAPPPQVSAFSPGASKAAGTTPTQAPAPD-----TPADGPTGPTTKSGIRPVDQPMQPTG 183

Query: 191 TPSSGTVPSYNLYLLVLALSRVVLKL 216
              S T P    +L +L +S ++L L
Sbjct: 184 LAQSSTSP----FLPLLFISLILLNL 200

BLAST of Clc05G06300 vs. ExPASy Swiss-Prot
Match: Q7EB72 (Non-specific lipid transfer protein GPI-anchored 15 OS=Arabidopsis thaliana OX=3702 GN=LTPG15 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 6.4e-05
Identity = 52/175 (29.71%), Postives = 78/175 (44.57%), Query Frame = 0

Query: 17  LAFTVAILPVSGQINTPCSPSMIARFTPCMNLLTNSTANGTSPTADCCDYLRSLTGSGMD 76
           +A   A+  V+    +    S +   +PC++ +   T N T+P+  CC  L S+  S   
Sbjct: 12  VALVAALWSVTKAQPSSSCVSTLTTLSPCLSYI---TGNSTTPSQPCCSRLDSVIKSSPQ 71

Query: 77  CLCLIVTASVP-FQLPINRSLAISLPRACNMPGVPV-QCRASAAPIPAPGPIPLGPALPP 136
           C+C  V + +P   L INR+ A+ LP ACN+   P+ QC A+  P           A PP
Sbjct: 72  CICSAVNSPIPNIGLNINRTQALQLPNACNIQTPPLTQCNAATGP----------TAQPP 131

Query: 137 EASPSPQGSGILQPATPAQSPEADTTEFITPPSNGGGSKTPTS--TTDAGNGISP 188
             SP+ +   +    TP   P A +         GGGSKT  S  T  +   + P
Sbjct: 132 APSPTEKTPDV--TLTPTSLPGARS-------GVGGGSKTVPSVGTGSSSRNVDP 164

BLAST of Clc05G06300 vs. ExPASy TrEMBL
Match: A0A5D3CZ10 (Non-specific lipid-transfer protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00580 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.1e-92
Identity = 188/215 (87.44%), Postives = 196/215 (91.16%), Query Frame = 0

Query: 1   MAPFVPLTGTIPLLLVLAFTVAILPVSGQINTPCSPSMIARFTPCMNLLTNSTANGTSPT 60
           MA FV LT TIPLL V AF V ILPV GQIN+PCSPS+IARFTPCMNLLTNSTANGTSPT
Sbjct: 1   MASFVLLTRTIPLLAV-AFAVVILPVLGQINSPCSPSIIARFTPCMNLLTNSTANGTSPT 60

Query: 61  ADCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPI 120
           +DCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPI
Sbjct: 61  SDCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPI 120

Query: 121 PAPGPIPLGPALPPEASPSPQGSGILQPATPAQSPEADTTEFITPPSNGGGSKTPTSTTD 180
           PAPGPIPLGPAL PEASPSPQGSGI QP TPAQSPE DTTEF+TPPS  GG++TPTSTTD
Sbjct: 121 PAPGPIPLGPALSPEASPSPQGSGIPQPVTPAQSPETDTTEFLTPPSTEGGAETPTSTTD 180

Query: 181 AGNGISPELTPSSGTVPSYNLYLLVLALSRVVLKL 216
           AGNGISP+LTPSS T+PSYN YLL LALS V LKL
Sbjct: 181 AGNGISPDLTPSSSTMPSYNFYLLALALSCVALKL 214

BLAST of Clc05G06300 vs. ExPASy TrEMBL
Match: A0A0A0L8M7 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G146480 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 9.3e-92
Identity = 186/215 (86.51%), Postives = 195/215 (90.70%), Query Frame = 0

Query: 1   MAPFVPLTGTIPLLLVLAFTVAILPVSGQINTPCSPSMIARFTPCMNLLTNSTANGTSPT 60
           MA FV LT TIPLL V AF V ILP SGQIN+PCSPS+IARFTPCMNLLTNSTANGTSPT
Sbjct: 1   MASFVLLTRTIPLLAV-AFAVVILPASGQINSPCSPSIIARFTPCMNLLTNSTANGTSPT 60

Query: 61  ADCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPI 120
           ADCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLP+ACNMPGVPVQCRASAAPI
Sbjct: 61  ADCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLPQACNMPGVPVQCRASAAPI 120

Query: 121 PAPGPIPLGPALPPEASPSPQGSGILQPATPAQSPEADTTEFITPPSNGGGSKTPTSTTD 180
           PAPGPIPLGPAL PEASPSPQGSGI QP TPAQSPE DTTEF+TPPS  GG++TPTSTTD
Sbjct: 121 PAPGPIPLGPALSPEASPSPQGSGIPQPVTPAQSPETDTTEFLTPPSTEGGAETPTSTTD 180

Query: 181 AGNGISPELTPSSGTVPSYNLYLLVLALSRVVLKL 216
           AGNGISP+LTPSS T+PSYN +LL LALS   LKL
Sbjct: 181 AGNGISPDLTPSSSTMPSYNFHLLALALSCAALKL 214

BLAST of Clc05G06300 vs. ExPASy TrEMBL
Match: A0A1S3AWJ9 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucumis melo OX=3656 GN=LOC103483694 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 9.3e-92
Identity = 187/215 (86.98%), Postives = 195/215 (90.70%), Query Frame = 0

Query: 1   MAPFVPLTGTIPLLLVLAFTVAILPVSGQINTPCSPSMIARFTPCMNLLTNSTANGTSPT 60
           MA FV LT TIPLL V AF V ILPV GQIN+PCSPS+IARFTPCMNLLTNSTANGTSPT
Sbjct: 9   MASFVLLTRTIPLLAV-AFAVVILPVLGQINSPCSPSIIARFTPCMNLLTNSTANGTSPT 68

Query: 61  ADCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPI 120
           +DCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPI
Sbjct: 69  SDCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPI 128

Query: 121 PAPGPIPLGPALPPEASPSPQGSGILQPATPAQSPEADTTEFITPPSNGGGSKTPTSTTD 180
           PAPGPIPLG AL PEASPSPQGSGI QP TPAQSPE DTTEF+TPPS  GG++TPTSTTD
Sbjct: 129 PAPGPIPLGSALSPEASPSPQGSGIPQPVTPAQSPETDTTEFLTPPSTEGGAETPTSTTD 188

Query: 181 AGNGISPELTPSSGTVPSYNLYLLVLALSRVVLKL 216
           AGNGISP+LTPSS T+PSYN YLL LALS V LKL
Sbjct: 189 AGNGISPDLTPSSSTMPSYNFYLLALALSCVALKL 222

BLAST of Clc05G06300 vs. ExPASy TrEMBL
Match: A0A6J1INS9 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita maxima OX=3661 GN=LOC111479172 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 9.0e-87
Identity = 179/216 (82.87%), Postives = 192/216 (88.89%), Query Frame = 0

Query: 1   MAPFVPLTGTIPLLLVLAFTVAILPVSGQINTPCSPSMIARFTPCMNLLTNSTANGTSPT 60
           M PFVPL  TI L+L LAF VAILPV GQIN+PC+PSMIARFTPCMNLLTNSTANGTSPT
Sbjct: 1   MKPFVPLARTI-LVLALAFAVAILPVLGQINSPCNPSMIARFTPCMNLLTNSTANGTSPT 60

Query: 61  ADCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPI 120
           A CCDYLRSLTG+GMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPI
Sbjct: 61  ASCCDYLRSLTGTGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPI 120

Query: 121 PAPGPIPLGPALPPEASPSPQGSGILQPATPAQSPEADTTEFITPPSNGGGSKTPTSTTD 180
           PAPGPI LGPAL P+ASP+P GSGI QPATPAQSPEADTTEF+TPP      +TPT+TTD
Sbjct: 121 PAPGPISLGPALSPDASPTPLGSGIPQPATPAQSPEADTTEFLTPP------ETPTTTTD 180

Query: 181 AGNGISPELTPSSGTVPSYNLYLLVLALSRVVLKLY 217
           AG GISPELTPSS T+P+YN YLL LALS +V +LY
Sbjct: 181 AGTGISPELTPSSATIPTYNFYLLGLALSCMVSRLY 209

BLAST of Clc05G06300 vs. ExPASy TrEMBL
Match: A0A5A7U4S1 (Non-specific lipid-transfer protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G005900 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 4.5e-86
Identity = 179/215 (83.26%), Postives = 187/215 (86.98%), Query Frame = 0

Query: 1   MAPFVPLTGTIPLLLVLAFTVAILPVSGQINTPCSPSMIARFTPCMNLLTNSTANGTSPT 60
           MA FV LT TIPLL V AF V ILPV GQIN+PCSPS+IARFTPCMNLLTNSTANGTSPT
Sbjct: 1   MASFVLLTRTIPLLAV-AFAVVILPVLGQINSPCSPSIIARFTPCMNLLTNSTANGTSPT 60

Query: 61  ADCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPI 120
           +DCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCR      
Sbjct: 61  SDCCDYLRSLTGSGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCR------ 120

Query: 121 PAPGPIPLGPALPPEASPSPQGSGILQPATPAQSPEADTTEFITPPSNGGGSKTPTSTTD 180
              GPIPLGPAL PEASPSPQGSGI QP TPAQSPE DTTEF+TPPS  GG++TPTSTTD
Sbjct: 121 ---GPIPLGPALSPEASPSPQGSGIPQPVTPAQSPETDTTEFLTPPSTEGGAETPTSTTD 180

Query: 181 AGNGISPELTPSSGTVPSYNLYLLVLALSRVVLKL 216
           AGNGISP+LTPSS T+PSYN YLL LALS V LKL
Sbjct: 181 AGNGISPDLTPSSSTMPSYNFYLLALALSCVALKL 205

BLAST of Clc05G06300 vs. TAIR 10
Match: AT3G22620.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 157.9 bits (398), Expect = 9.1e-39
Identity = 102/206 (49.51%), Postives = 130/206 (63.11%), Query Frame = 0

Query: 14  LLVLAFTVAILPVSGQIN--TPCSPSMIARFTPCMNLLTNSTANGTSPTADCCDYLRSLT 73
           L+V    V  LP+ GQ    + C+PSM+   +PCM  +TNS++NGTSP++DCC+ LRSLT
Sbjct: 7   LVVAMIAVLALPIRGQQQPLSQCTPSMMTTVSPCMGFITNSSSNGTSPSSDCCNSLRSLT 66

Query: 74  GSGMDCLCLIVTASVPFQLPINRSLAISLPRACNMPGVPVQCRASAAPIPAPGPIPLGPA 133
             GM CLCLIVT +VPF +PINR+ A+SLPRACNMP VP+QC+A+ AP  APGP      
Sbjct: 67  TGGMGCLCLIVTGTVPFNIPINRTTAVSLPRACNMPRVPLQCQANIAPAAAPGP---AAT 126

Query: 134 LPPEASPSPQGSGILQPATP-AQSPEADTTEFITPPSNGGGSKTPTSTTDAGNGISPELT 193
             P  SP P+   I+   TP AQ+P++DTT   TP  +GG    PTS  D G+   P  T
Sbjct: 127 FGPSMSPGPETDPIVPEPTPAAQTPQSDTTRPFTPSVDGG---APTS-DDGGSTSRPSET 186

Query: 194 PSSGTVPSYNLYLLVLALSRVVLKLY 217
           PSS    S +L    +AL  V LK Y
Sbjct: 187 PSSAYALSPSLLFFSIAL--VALKFY 203

BLAST of Clc05G06300 vs. TAIR 10
Match: AT1G05450.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 145.6 bits (366), Expect = 4.7e-35
Identity = 90/193 (46.63%), Postives = 118/193 (61.14%), Query Frame = 0

Query: 26  VSGQINTPCSPSMIARFTPCMNLLTNSTANGTSPTADCCDYLRSLTGSGMDCLCLIVTAS 85
           +  QINTPCSPSM++  T C + L   T  G+ PT+DCC  L+SLTG+GMDCLCLIVTA 
Sbjct: 25  ILAQINTPCSPSMLSSVTGCTSFL---TGGGSFPTSDCCGALKSLTGTGMDCLCLIVTAG 84

Query: 86  VPFQLPINRSLAISLPRACNMPGVPVQCRASAAPIPAPGPIPLGPALPPEASPS--PQGS 145
           VP  +PINR+LAISLPRAC +PGVPVQC+ASAAP+P PGP   GP   P  S +  P+GS
Sbjct: 85  VPISIPINRTLAISLPRACGIPGVPVQCKASAAPLPTPGPASFGPTTSPTDSQTSDPEGS 144

Query: 146 GILQPATPAQSPEADTTEFITPPSNGGGSKTPTSTTDAGNGISPELTPSSGTVPSYNLYL 205
              +P T   + +    + ++   NGG             G +P   PSS    S++L L
Sbjct: 145 ASFRPPTSPTTSQTPNDKDLSGSGNGGDPM----------GFAPP-PPSSSPSSSHSLKL 203

Query: 206 --LVLALSRVVLK 215
             L+ A +  ++K
Sbjct: 205 SYLLFAFAFTIIK 203

BLAST of Clc05G06300 vs. TAIR 10
Match: AT2G48140.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 125.9 bits (315), Expect = 3.8e-29
Identity = 82/206 (39.81%), Postives = 118/206 (57.28%), Query Frame = 0

Query: 11  IPLLLVLAFTVAILPVSGQINTPCSPSMIARFTPCMNLLTNSTANGTSPTADCCDYLRSL 70
           + L++V+  +  +     QI+TPC+ SMI+ FTPC+N +T S+    +PTA CCD L++L
Sbjct: 4   LTLIVVMMSSFMLGGQGQQISTPCTSSMISTFTPCLNFITGSSGGSVTPTAGCCDSLKTL 63

Query: 71  TGSGMDCLCLIVTASVPFQLP-INRSLAISLPRACNMPGVPVQCRASAAPIPAPGPIPLG 130
           T +GM C CLI+TA+VP     INR+LA++LPRAC M GVP+QC+A+  P+PAPG +P  
Sbjct: 64  TNTGMGCACLILTANVPLPTGFINRTLALALPRACKMGGVPIQCQAAGTPLPAPGQVPFL 123

Query: 131 PALPPEASPSPQGSGILQPATPAQSPEADTTEFITPPSNGGGSKTPTSTTDAGNGISPEL 190
            A PP+ S    G+      TP Q+P  D     TP     G  T +        + P  
Sbjct: 124 IAPPPQVSAFSPGASKAAGTTPTQAPAPD-----TPADGPTGPTTKSGIRPVDQPMQPTG 183

Query: 191 TPSSGTVPSYNLYLLVLALSRVVLKL 216
              S T P    +L +L +S ++L L
Sbjct: 184 LAQSSTSP----FLPLLFISLILLNL 200

BLAST of Clc05G06300 vs. TAIR 10
Match: AT2G48140.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 8.0e-27
Identity = 59/117 (50.43%), Postives = 84/117 (71.79%), Query Frame = 0

Query: 11  IPLLLVLAFTVAILPVSGQINTPCSPSMIARFTPCMNLLTNSTANGTSPTADCCDYLRSL 70
           + L++V+  +  +     QI+TPC+ SMI+ FTPC+N +T S+    +PTA CCD L++L
Sbjct: 4   LTLIVVMMSSFMLGGQGQQISTPCTSSMISTFTPCLNFITGSSGGSVTPTAGCCDSLKTL 63

Query: 71  TGSGMDCLCLIVTASVPFQLP-INRSLAISLPRACNMPGVPVQCRASAAPIPAPGPI 127
           T +GM C CLI+TA+VP     INR+LA++LPRAC M GVP+QC+A+  P+PAPG I
Sbjct: 64  TNTGMGCACLILTANVPLPTGFINRTLALALPRACKMGGVPIQCQAAGTPLPAPGSI 120

BLAST of Clc05G06300 vs. TAIR 10
Match: AT2G48130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 49.3 bits (116), Expect = 4.5e-06
Identity = 52/175 (29.71%), Postives = 78/175 (44.57%), Query Frame = 0

Query: 17  LAFTVAILPVSGQINTPCSPSMIARFTPCMNLLTNSTANGTSPTADCCDYLRSLTGSGMD 76
           +A   A+  V+    +    S +   +PC++ +   T N T+P+  CC  L S+  S   
Sbjct: 12  VALVAALWSVTKAQPSSSCVSTLTTLSPCLSYI---TGNSTTPSQPCCSRLDSVIKSSPQ 71

Query: 77  CLCLIVTASVP-FQLPINRSLAISLPRACNMPGVPV-QCRASAAPIPAPGPIPLGPALPP 136
           C+C  V + +P   L INR+ A+ LP ACN+   P+ QC A+  P           A PP
Sbjct: 72  CICSAVNSPIPNIGLNINRTQALQLPNACNIQTPPLTQCNAATGP----------TAQPP 131

Query: 137 EASPSPQGSGILQPATPAQSPEADTTEFITPPSNGGGSKTPTS--TTDAGNGISP 188
             SP+ +   +    TP   P A +         GGGSKT  S  T  +   + P
Sbjct: 132 APSPTEKTPDV--TLTPTSLPGARS-------GVGGGSKTVPSVGTGSSSRNVDP 164

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038875696.11.7e-9587.50non-specific lipid transfer protein GPI-anchored 19-like [Benincasa hispida][more]
TYK17211.12.3e-9287.44non-specific lipid-transfer protein-like protein [Cucumis melo var. makuwa][more]
XP_004134438.11.9e-9186.51non-specific lipid-transfer protein-like protein At2g13820 [Cucumis sativus] >KG... [more]
XP_008438651.11.9e-9186.98PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis m... [more]
XP_023527187.18.4e-8782.41non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita pepo subsp... [more]
Match NameE-valueIdentityDescription
Q9LJ851.3e-3749.51Non-specific lipid transfer protein GPI-anchored 20 OS=Arabidopsis thaliana OX=3... [more]
Q1G2Y56.6e-3446.63Non-specific lipid transfer protein GPI-anchored 21 OS=Arabidopsis thaliana OX=3... [more]
Q94AX35.4e-2839.81Non-specific lipid transfer protein GPI-anchored 16 OS=Arabidopsis thaliana OX=3... [more]
Q7EB726.4e-0529.71Non-specific lipid transfer protein GPI-anchored 15 OS=Arabidopsis thaliana OX=3... [more]
Match NameE-valueIdentityDescription
A0A5D3CZ101.1e-9287.44Non-specific lipid-transfer protein-like protein OS=Cucumis melo var. makuwa OX=... [more]
A0A0A0L8M79.3e-9286.51AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G146480 PE=4 SV... [more]
A0A1S3AWJ99.3e-9286.98non-specific lipid-transfer protein-like protein At2g13820 OS=Cucumis melo OX=36... [more]
A0A6J1INS99.0e-8782.87non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita maxima O... [more]
A0A5A7U4S14.5e-8683.26Non-specific lipid-transfer protein-like protein OS=Cucumis melo var. makuwa OX=... [more]
Match NameE-valueIdentityDescription
AT3G22620.19.1e-3949.51Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT1G05450.24.7e-3546.63Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT2G48140.13.8e-2939.81Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT2G48140.28.0e-2750.43Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT2G48130.14.5e-0629.71Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 34..113
e-value: 3.6E-6
score: 36.5
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 22..113
e-value: 1.1E-16
score: 60.7
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilyGENE3D1.10.110.10coord: 32..113
e-value: 1.5E-11
score: 46.0
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILY47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 38..113
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..191
NoneNo IPR availablePANTHERPTHR33044:SF136BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEINcoord: 15..214
NoneNo IPR availableCDDcd00010AAI_LTSScoord: 42..106
e-value: 1.1678E-11
score: 56.2811
IPR043325Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) ProteinPANTHERPTHR33044BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATEDcoord: 15..214

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc05G06300.1Clc05G06300.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0031225 anchored component of membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane