Clc05G06180 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G06180
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	40S ribosomal protein S3a
Location	ClcChr05: 4560203 .. 4562812 (+)
RNA-Seq Expression	Clc05G06180
Synteny	Clc05G06180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAGAGACCACCCTGAAACATGAGCTATATAAACACAGATTTAGGGTTTTTGGAGGCTCTCAAAACTTTCTCTGCCGTGCAGCGTAACATCTGCAGAGTTAGGGCAACTCACCTCCTCCAGCCATGGCCGTCGGGTACTCTCTCTCTCTCTCTCATTTCGATTGTTTTCAATTGATGCTGCATTTTTGTTTTATATCTAACTCTCGTTTTCTGTTCGATCAGCAAGAACAAGCGGATTTCGAAGGGAAAGAAGGGTGGCAAGAAGAAAGCGTGAGCATATTTATTTGCTCCTTTAGTTCCTCAGATCTTCGTTTTAGTTTTGGAGTACGTTTATGTATCTGTTATTTGCTTGTCTTTCAGCACCGATCCATTTGCCAAGAAGGATTGGTATGATATCAAGGCTCCTTCGGTTTTCACTGTAAAAAATGTCGGAAAGACTCTTGTTACTCGCACCCAGGGTACCAAGGTAAATCGTCCCTATTCTAATTGCTTTTACTTTTGTGTTTGTAATTTATCTGGAAACTGAGTGTAGAGTGAGTGAAATGAAATTGTGCAATGTGCTTGTATAATCTTAGAGACATTGTTGAATTTGATTAATGTATGAGTTACATGTTTATGGGTTGTTTTCATCTCTATCACCATGTTGATAAATTATGGAATGCAATCTCTACTCTTTTTTTAAAAGAAACTGAGTCAAAATCTGATGGGCTTCTAGTATTAGAGAGGTTGCGAGTATTCCAATTTCTTCTGTTTATAGTTTTGTATTGATGTTTTTCCTGAACTGGAATATTTGGTATCTGAGTACCAACGATTGGATTTTATATTTCCTAGATGACTTGAAATACCCTTTGCAAGTTCGGATATATTGGATATGCTGCTAACCTCTTTAGAGGTTTCATAAGTCATATGATGCAGTGGTTAGAATTTTAGACACCAGTTTTGCCGCTGTAACTCATATGTTCATTTAGATTTTATTTATTGTTTAGTTCATGTAAAGTGAATGTTAATTTTCCTTTGTTGCTCTCAATAGATTGCATCTGAAGGACTCAAACATAGAGTCTTCGAGATCTCTTTGGCTGATCTTCAGGATGATGAAGAGCATGCTTACAGAAAGATTCGATTGAGAGCAGAAGATGTTCAAGGGAGGAATGTACTGACAAATTTCTGGGTGAGATGAAATTTCTATCTAATGAATCAGATTTATTCACGTCTAGTTTTCTATCTTTCATTTTGATCATCTTTTTTCTTGATTGTTAAAATGTTCAGGGAATGAACTTCACTACTGACAAATTGAGGTCTTTAGTACGCAAGTGGCATACTTTGATTGAAGCTCACGTAGATGTCAAAACCACAGACAACTACACCCTTAGAATGTTTTGCATTGGTTTTACTAAGAGAAGGCCAAACCAGGTGAAAAGGACCTGTTATGCACAATCGAGCCAGATCAGGCAGGTTAGTTCATAGGATGTCTGTGAAAGCATTTTATATTGTAATATTTTTCTACCAAGCATTACTAAGTTTACGAAAAGTTGTATTTGCTTATGGTATTTCATTTGTTGAATTGAAAGTAGTTGCCATATTCGTAAATCAGCACACACGTGTGTTTTGCAAATCATTCTCTGAATTCAATCAATGTTGATATCTTTTATACATTGCAGATCCGCCGCAAGATGAGAGAGATCATGGTAAACCAAGCATCCTCCTGTGATTTGAAGGAATTGGTTCGCAAATTCATTCCAGAGTCAATTGGGAAGGAGATTGAAAAGGCAACATCCAGTATCTACCCACTTCAAAATGTGTTTATCCGGAAGGTTAAAATCTTGAAAGCTCCCAAATTCGATCTTGGGAAGTTAATGGAGGTATAAATCTAGTTTATTTCTCATTTGCTCTTTAATAGTTTAAACTGATCCAGTACCAACGGCCCAACAGAATTATTTCAGAGTTTTATGTTTCATCCTTGATATTTGGTATTAGAAGGGAAATTTTCTATTGTCCTCCGATTCATTGCTCTTGCTGATTGTGCGTGTAGGTTCACGGAGACTACTCAGAGGACGTTGGCGTAAAGGTTGATAGACCTGCCGACGAAGCTGCAGTAGAGGAGGCTACTGAAGTTGTTGGAGCTTGAGTTCAGTTATGTTTAATTTCATTTGAGTTGGATTAATCTGTTTTTTGTTTAATTTTTGGCCCCCTTTGTTTAAACTTAGTTCCCGCTTCTCGGTCTAATCAGAGAGTTGGTTTTGAGGATGGCAATTTTGTGCTATTAGTCAAAGAATACTTTCATTGAATTAATTTAGCAAATTGCACCGTTTTAAATGGATTATTGCGGACTCGATACATAATCTTTTTCGTTCTTTCTTTGGATAATGCAAATAAATACTCTCTGGAGGGGGCTGCCATCTAAACTCAATTACTCAAGGGGGAGGAGGGTGGAAAGGGAATAATTGGGACTTCACTTCTAAATATAGTTTCCTGGAATAAAGTCACCATGGAAGCCTTAAGCTACATTTGCTTATAGATAAATTACAGATAATGTTGAAGGCTAGAAACTAAAGCACTCTACGAGAAAGGTGAAAGTGGGAATTTCTTCTAAATGAGATTGAAAGTGGG

mRNA sequence

AAAAAAGAGACCACCCTGAAACATGAGCTATATAAACACAGATTTAGGGTTTTTGGAGGCTCTCAAAACTTTCTCTGCCGTGCAGCGTAACATCTGCAGAGTTAGGGCAACTCACCTCCTCCAGCCATGGCCGTCGGCAAGAACAAGCGGATTTCGAAGGGAAAGAAGGGTGGCAAGAAGAAAGCCACCGATCCATTTGCCAAGAAGGATTGGTATGATATCAAGGCTCCTTCGGTTTTCACTGTAAAAAATGTCGGAAAGACTCTTGTTACTCGCACCCAGGGTACCAAGATTGCATCTGAAGGACTCAAACATAGAGTCTTCGAGATCTCTTTGGCTGATCTTCAGGATGATGAAGAGCATGCTTACAGAAAGATTCGATTGAGAGCAGAAGATGTTCAAGGGAGGAATGTACTGACAAATTTCTGGGGAATGAACTTCACTACTGACAAATTGAGGTCTTTAGTACGCAAGTGGCATACTTTGATTGAAGCTCACGTAGATGTCAAAACCACAGACAACTACACCCTTAGAATGTTTTGCATTGGTTTTACTAAGAGAAGGCCAAACCAGGTGAAAAGGACCTGTTATGCACAATCGAGCCAGATCAGGCAGATCCGCCGCAAGATGAGAGAGATCATGGTAAACCAAGCATCCTCCTGTGATTTGAAGGAATTGGTTCGCAAATTCATTCCAGAGTCAATTGGGAAGGAGATTGAAAAGGCAACATCCAGTATCTACCCACTTCAAAATGTGTTTATCCGGAAGGTTAAAATCTTGAAAGCTCCCAAATTCGATCTTGGGAAGTTAATGGAGGTTCACGGAGACTACTCAGAGGACGTTGGCGTAAAGGTTGATAGACCTGCCGACGAAGCTGCAGTAGAGGAGGCTACTGAAGTTGTTGGAGCTTGAGTTCAGTTATGTTTAATTTCATTTGAGTTGGATTAATCTGTTTTTTGTTTAATTTTTGGCCCCCTTTGTTTAAACTTAGTTCCCGCTTCTCGGTCTAATCAGAGAGTTGGTTTTGAGGATGGCAATTTTGTGCTATTAGTCAAAGAATACTTTCATTGAATTAATTTAGCAAATTGCACCGTTTTAAATGGATTATTGCGGACTCGATACATAATCTTTTTCGTTCTTTCTTTGGATAATGCAAATAAATACTCTCTGGAGGGGGCTGCCATCTAAACTCAATTACTCAAGGGGGAGGAGGGTGGAAAGGGAATAATTGGGACTTCACTTCTAAATATAGTTTCCTGGAATAAAGTCACCATGGAAGCCTTAAGCTACATTTGCTTATAGATAAATTACAGATAATGTTGAAGGCTAGAAACTAAAGCACTCTACGAGAAAGGTGAAAGTGGGAATTTCTTCTAAATGAGATTGAAAGTGGG

Coding sequence (CDS)

ATGGCCGTCGGCAAGAACAAGCGGATTTCGAAGGGAAAGAAGGGTGGCAAGAAGAAAGCCACCGATCCATTTGCCAAGAAGGATTGGTATGATATCAAGGCTCCTTCGGTTTTCACTGTAAAAAATGTCGGAAAGACTCTTGTTACTCGCACCCAGGGTACCAAGATTGCATCTGAAGGACTCAAACATAGAGTCTTCGAGATCTCTTTGGCTGATCTTCAGGATGATGAAGAGCATGCTTACAGAAAGATTCGATTGAGAGCAGAAGATGTTCAAGGGAGGAATGTACTGACAAATTTCTGGGGAATGAACTTCACTACTGACAAATTGAGGTCTTTAGTACGCAAGTGGCATACTTTGATTGAAGCTCACGTAGATGTCAAAACCACAGACAACTACACCCTTAGAATGTTTTGCATTGGTTTTACTAAGAGAAGGCCAAACCAGGTGAAAAGGACCTGTTATGCACAATCGAGCCAGATCAGGCAGATCCGCCGCAAGATGAGAGAGATCATGGTAAACCAAGCATCCTCCTGTGATTTGAAGGAATTGGTTCGCAAATTCATTCCAGAGTCAATTGGGAAGGAGATTGAAAAGGCAACATCCAGTATCTACCCACTTCAAAATGTGTTTATCCGGAAGGTTAAAATCTTGAAAGCTCCCAAATTCGATCTTGGGAAGTTAATGGAGGTTCACGGAGACTACTCAGAGGACGTTGGCGTAAAGGTTGATAGACCTGCCGACGAAGCTGCAGTAGAGGAGGCTACTGAAGTTGTTGGAGCTTGA

Protein sequence

MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEAAVEEATEVVGA

Homology

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BLAST of Clc05G06180 vs. NCBI nr
Match: XP_022979234.1 (40S ribosomal protein S3a-like [Cucurbita maxima])

HSP 1 Score: 508.4 bits (1308), Expect = 3.5e-140
Identity = 258/261 (98.85%), Postives = 260/261 (99.62%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEAAVEEATEVVGA 262
           VKV+RPADEAA EEATEVVGA
Sbjct: 241 VKVERPADEAAAEEATEVVGA 261

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BLAST of Clc05G06180 vs. NCBI nr
Match: XP_023527182.1 (40S ribosomal protein S3a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 507.3 bits (1305), Expect = 7.9e-140
Identity = 257/261 (98.47%), Postives = 260/261 (99.62%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEAAVEEATEVVGA 262
           VKV+RPADEAA EEATEVVGA
Sbjct: 241 VKVERPADEAAAEEATEVVGA 261

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BLAST of Clc05G06180 vs. NCBI nr
Match: XP_038875051.1 (40S ribosomal protein S3a [Benincasa hispida])

HSP 1 Score: 506.9 bits (1304), Expect = 1.0e-139
Identity = 257/261 (98.47%), Postives = 260/261 (99.62%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM+NQASSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMINQASSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEAAVEEATEVVGA 262
           VKV+RPADEAAVE ATE+VGA
Sbjct: 241 VKVERPADEAAVEGATEIVGA 261

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BLAST of Clc05G06180 vs. NCBI nr
Match: XP_022956208.1 (40S ribosomal protein S3a-like [Cucurbita moschata] >KAG6582323.1 hypothetical protein SDJN03_22325, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018732.1 hypothetical protein SDJN02_20605 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 506.5 bits (1303), Expect = 1.3e-139
Identity = 257/261 (98.47%), Postives = 260/261 (99.62%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEAAVEEATEVVGA 262
           VKV+RPADEAA EEATEVVGA
Sbjct: 241 VKVERPADEAAAEEATEVVGA 261

[Close]

BLAST of Clc05G06180 vs. NCBI nr
Match: XP_008438626.1 (PREDICTED: 40S ribosomal protein S3a [Cucumis melo])

HSP 1 Score: 506.1 bits (1302), Expect = 1.8e-139
Identity = 258/261 (98.85%), Postives = 260/261 (99.62%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEISLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEISLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEAAVEEATEVVGA 262
           VKV+RPADEAAVE ATEVVGA
Sbjct: 241 VKVERPADEAAVEGATEVVGA 261

[Close]

BLAST of Clc05G06180 vs. ExPASy Swiss-Prot
Match: Q8GTE3 (40S ribosomal protein S3a OS=Cicer arietinum OX=3827 PE=2 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 7.7e-130
Identity = 236/261 (90.42%), Postives = 248/261 (95.02%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKA DPF+KKDWYDIKAPSVF VKNVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPFSKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEISLADLQ DE++A+RKIRLRAEDVQG+NVLTNF+GM+FTTDKLRSLVRKW TL
Sbjct: 61  LKHRVFEISLADLQGDEDNAFRKIRLRAEDVQGKNVLTNFYGMDFTTDKLRSLVRKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRR NQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPE IGKEIEKATSSIYPLQNVFIRKVKILK+PKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKSPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEAAVEEATEVVGA 262
            KV+ PADE  VE   E+VGA
Sbjct: 241 TKVESPADETVVEGTPEIVGA 261

[Close]

BLAST of Clc05G06180 vs. ExPASy Swiss-Prot
Match: P49198 (40S ribosomal protein S3a OS=Helianthus annuus OX=4232 GN=RPS3A PE=2 SV=2)

HSP 1 Score: 459.5 bits (1181), Expect = 2.5e-128
Identity = 230/261 (88.12%), Postives = 251/261 (96.17%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKA DPF+KKDWYDIKAPS+F  +NVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPFSKKDWYDIKAPSLFITRNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQ+DE+H+YRKIRLRAEDVQG+NVLTNFWGM+ TTDKLRSLV+KW +L
Sbjct: 61  LKHRVFEVSLADLQNDEDHSYRKIRLRAEDVQGKNVLTNFWGMDVTTDKLRSLVKKWQSL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTDN+TLRMFCIGFTK+R NQVKRTCYAQSSQI+QIRRKMREIMV QA +CD
Sbjct: 121 IEAHVDVKTTDNFTLRMFCIGFTKKRANQVKRTCYAQSSQIKQIRRKMREIMVTQAQTCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELV+KFIPESIG+EIEKATSSIYPLQNVFIRKVKILKAPKFD+GKLMEVHGDYSEDVG
Sbjct: 181 LKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEAAVEEATEVVGA 262
           VK+DRPA+EAA  EATEV+GA
Sbjct: 241 VKLDRPAEEAA-PEATEVIGA 260

[Close]

BLAST of Clc05G06180 vs. ExPASy Swiss-Prot
Match: A5B4K1 (40S ribosomal protein S3a-1 OS=Vitis vinifera OX=29760 GN=GSVIVT00020038001 PE=3 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 4.2e-128
Identity = 231/261 (88.51%), Postives = 245/261 (93.87%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKA DPFAKKDWYDIKAPSVF V+NVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEISLADLQ DE+ AYRKIRLRAEDVQGRNVLTNFWGM+FTTDKLRSLVRKW TL
Sbjct: 61  LKHRVFEISLADLQADEDQAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTDNYTLR+FCI FTK+R NQ K+TCYAQSSQIRQIRRKMREIM N A+SCD
Sbjct: 121 IEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREIMTNMATSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELV+KFIPESIG+EIEKATSSIYPLQNV+IRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEAAVEEATEVVGA 262
            K++RPADE   E  TEV+GA
Sbjct: 241 TKLERPADEPVAEGVTEVIGA 261

[Close]

BLAST of Clc05G06180 vs. ExPASy Swiss-Prot
Match: P33444 (40S ribosomal protein S3a OS=Catharanthus roseus OX=4058 GN=RPS3A PE=2 SV=4)

HSP 1 Score: 456.4 bits (1173), Expect = 2.1e-127
Identity = 231/262 (88.17%), Postives = 251/262 (95.80%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKA DPFAKKDWYDIKAPSVF+V+NVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFSVRNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           L+HRVFEISLADLQ DE+H++RKIRLRAED+QG+NVLTNFWGM+FTTDKLRSLVRKW +L
Sbjct: 61  LEHRVFEISLADLQGDEDHSFRKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTD+YTLRMFCIGFTK+R NQ KRTCYAQSSQIRQIRRKMREIMVNQA SCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQAQSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DV 240
           LK+LV+KFIPESIG+EIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+E D+
Sbjct: 181 LKDLVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNEDDI 240

Query: 241 GVKVDRPADEAAVEEATEVVGA 262
           G K+DRPA+E AV E TEV+GA
Sbjct: 241 GTKLDRPAEE-AVAEPTEVIGA 261

[Close]

BLAST of Clc05G06180 vs. ExPASy Swiss-Prot
Match: Q285L8 (40S ribosomal protein S3a OS=Nicotiana tabacum OX=4097 GN=cyc07 PE=2 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 1.8e-126
Identity = 227/261 (86.97%), Postives = 244/261 (93.49%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKA DP+AKKDWYDIKAPSVF +KNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPYAKKDWYDIKAPSVFDIKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQ DE+ ++RKIRLRAEDVQG+NVLTNFWGM+FTTDKLRSLV+KW TL
Sbjct: 61  LKHRVFEVSLADLQKDEDQSFRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVKKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTD+YTLRMFCI FTK+RPNQ KRTCYAQSSQIRQIRRKM EIM NQASSCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIAFTKKRPNQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELV KFIPESIG+EIEKATSSI+PLQNV+IRKVKILKAPKFD+GKLMEVHGDYSEDVG
Sbjct: 181 LKELVAKFIPESIGREIEKATSSIFPLQNVYIRKVKILKAPKFDIGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEAAVEEATEVVGA 262
           VK+DRPADE   E   E+ GA
Sbjct: 241 VKLDRPADETVAEAEPEIPGA 261

[Close]

BLAST of Clc05G06180 vs. ExPASy TrEMBL
Match: A0A6J1IW45 (40S ribosomal protein S3a OS=Cucurbita maxima OX=3661 GN=LOC111479024 PE=3 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 1.7e-140
Identity = 258/261 (98.85%), Postives = 260/261 (99.62%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEAAVEEATEVVGA 262
           VKV+RPADEAA EEATEVVGA
Sbjct: 241 VKVERPADEAAAEEATEVVGA 261

[Close]

BLAST of Clc05G06180 vs. ExPASy TrEMBL
Match: A0A6J1GW62 (40S ribosomal protein S3a OS=Cucurbita moschata OX=3662 GN=LOC111457971 PE=3 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 6.5e-140
Identity = 257/261 (98.47%), Postives = 260/261 (99.62%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEAAVEEATEVVGA 262
           VKV+RPADEAA EEATEVVGA
Sbjct: 241 VKVERPADEAAAEEATEVVGA 261

[Close]

BLAST of Clc05G06180 vs. ExPASy TrEMBL
Match: A0A1S3AXI4 (40S ribosomal protein S3a OS=Cucumis melo OX=3656 GN=LOC103483683 PE=3 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 8.5e-140
Identity = 258/261 (98.85%), Postives = 260/261 (99.62%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEISLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEISLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEAAVEEATEVVGA 262
           VKV+RPADEAAVE ATEVVGA
Sbjct: 241 VKVERPADEAAVEGATEVVGA 261

[Close]

BLAST of Clc05G06180 vs. ExPASy TrEMBL
Match: A0A5D3CZ21 (40S ribosomal protein S3a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00720 PE=3 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 2.5e-139
Identity = 257/261 (98.47%), Postives = 259/261 (99.23%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEISLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEISLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEAAVEEATEVVGA 262
           VKV+RPADE AVE ATEVVGA
Sbjct: 241 VKVERPADETAVEGATEVVGA 261

[Close]

BLAST of Clc05G06180 vs. ExPASy TrEMBL
Match: A0A0A0L4P6 (40S ribosomal protein S3a OS=Cucumis sativus OX=3659 GN=Csa_3G146360 PE=3 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 2.5e-139
Identity = 257/261 (98.47%), Postives = 259/261 (99.23%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEISLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEISLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEAAVEEATEVVGA 262
           VKV+RPADE AVE ATEVVGA
Sbjct: 241 VKVERPADETAVEGATEVVGA 261

[Close]

BLAST of Clc05G06180 vs. TAIR 10
Match: AT3G04840.1 (Ribosomal protein S3Ae )

HSP 1 Score: 451.4 bits (1160), Expect = 4.8e-127
Identity = 226/262 (86.26%), Postives = 247/262 (94.27%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKG+KGGKKKA DPF+KKDWYD+KAPS+FT +NVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGRKGGKKKAVDPFSKKDWYDVKAPSIFTHRNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQ DE++AYRKIRLRAEDVQGRNVL  FWGM+FTTDKLRSLV+KW TL
Sbjct: 61  LKHRVFEVSLADLQGDEDNAYRKIRLRAEDVQGRNVLCQFWGMDFTTDKLRSLVKKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTD+YTLR+FCI FTKRR NQVKRTCYAQSSQIRQIRRKMR+IMV +ASSCD
Sbjct: 121 IEAHVDVKTTDSYTLRLFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMRDIMVREASSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDV 240
           LK+LV KFIPE+IG+EIEKAT  IYPLQNVFIRKVKILKAPKFDLGKLM+VHGDYS EDV
Sbjct: 181 LKDLVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMDVHGDYSAEDV 240

Query: 241 GVKVDRPADEAAVEEATEVVGA 262
           GVKVDRPADE AVEE TE++GA
Sbjct: 241 GVKVDRPADEMAVEEPTEIIGA 262

[Close]

BLAST of Clc05G06180 vs. TAIR 10
Match: AT4G34670.1 (Ribosomal protein S3Ae )

HSP 1 Score: 450.3 bits (1157), Expect = 1.1e-126
Identity = 227/262 (86.64%), Postives = 244/262 (93.13%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKG+KGGKKKA DPF+KKDWYD+KAP  FT +NVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGRKGGKKKAVDPFSKKDWYDVKAPGSFTNRNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQ+DE++AYRKIRLRAEDVQGRNVLT FWGM+FTTDKLRSLV+KW TL
Sbjct: 61  LKHRVFEVSLADLQNDEDNAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTD YTLRMFCI FTKRR NQVKRTCYAQSSQIRQIRRKM EIMV +ASSCD
Sbjct: 121 IEAHVDVKTTDGYTLRMFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMSEIMVKEASSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDV 240
           LKELV KFIPE+IG+EIEKAT  IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY +EDV
Sbjct: 181 LKELVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDV 240

Query: 241 GVKVDRPADEAAVEEATEVVGA 262
           GVKVDRPADE  VEE TE++GA
Sbjct: 241 GVKVDRPADETMVEEPTEIIGA 262

The following BLAST results are available for this feature:

BLAST of Clc05G06180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022979234.1	3.5e-140	98.85	40S ribosomal protein S3a-like [Cucurbita maxima]	[more]
XP_023527182.1	7.9e-140	98.47	40S ribosomal protein S3a-like [Cucurbita pepo subsp. pepo]	[more]
XP_038875051.1	1.0e-139	98.47	40S ribosomal protein S3a [Benincasa hispida]	[more]
XP_022956208.1	1.3e-139	98.47	40S ribosomal protein S3a-like [Cucurbita moschata] >KAG6582323.1 hypothetical p...	[more]
XP_008438626.1	1.8e-139	98.85	PREDICTED: 40S ribosomal protein S3a [Cucumis melo]	[more]

BLAST of Clc05G06180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GTE3	7.7e-130	90.42	40S ribosomal protein S3a OS=Cicer arietinum OX=3827 PE=2 SV=1	[more]
P49198	2.5e-128	88.12	40S ribosomal protein S3a OS=Helianthus annuus OX=4232 GN=RPS3A PE=2 SV=2	[more]
A5B4K1	4.2e-128	88.51	40S ribosomal protein S3a-1 OS=Vitis vinifera OX=29760 GN=GSVIVT00020038001 PE=3...	[more]
P33444	2.1e-127	88.17	40S ribosomal protein S3a OS=Catharanthus roseus OX=4058 GN=RPS3A PE=2 SV=4	[more]
Q285L8	1.8e-126	86.97	40S ribosomal protein S3a OS=Nicotiana tabacum OX=4097 GN=cyc07 PE=2 SV=1	[more]

BLAST of Clc05G06180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IW45	1.7e-140	98.85	40S ribosomal protein S3a OS=Cucurbita maxima OX=3661 GN=LOC111479024 PE=3 SV=1	[more]
A0A6J1GW62	6.5e-140	98.47	40S ribosomal protein S3a OS=Cucurbita moschata OX=3662 GN=LOC111457971 PE=3 SV=...	[more]
A0A1S3AXI4	8.5e-140	98.85	40S ribosomal protein S3a OS=Cucumis melo OX=3656 GN=LOC103483683 PE=3 SV=1	[more]
A0A5D3CZ21	2.5e-139	98.47	40S ribosomal protein S3a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0L4P6	2.5e-139	98.47	40S ribosomal protein S3a OS=Cucumis sativus OX=3659 GN=Csa_3G146360 PE=3 SV=1	[more]

BLAST of Clc05G06180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04840.1	4.8e-127	86.26	Ribosomal protein S3Ae	[more]
AT4G34670.1	1.1e-126	86.64	Ribosomal protein S3Ae	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001593	Ribosomal protein S3Ae	SMART	SM01397	Ribosomal_S3Ae_2	coord: 15..221 e-value: 8.6E-141 score: 483.7
IPR001593	Ribosomal protein S3Ae	PFAM	PF01015	Ribosomal_S3Ae	coord: 16..221 e-value: 1.2E-83 score: 279.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PANTHER	PTHR11830	40S RIBOSOMAL PROTEIN S3A	coord: 1..261
None	No IPR available	PANTHER	PTHR11830:SF33	40S RIBOSOMAL PROTEIN S3A	coord: 1..261
IPR018281	Ribosomal protein S3Ae, conserved site	PROSITE	PS01191	RIBOSOMAL_S3AE	coord: 61..73
IPR027500	40S ribosomal protein S1/3, eukaryotes	HAMAP	MF_03122	Ribosomal_S3Ae_euk	coord: 1..258 score: 40.966972

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G06180.1	Clc05G06180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome