Clc05G05650 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G05650
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	C2H2-type domain-containing protein
Location	ClcChr05: 4065790 .. 4066743 (-)
RNA-Seq Expression	Clc05G05650
Synteny	Clc05G05650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTGTTTGTCTTTGTACGTGGTTTCACTTTTTGGTCTCTGTATAAAAACTCCACTTTCTAGCAGCCTTTTACCTATTGCTTTCTTTCTTCTCTTTTGTTTTTTTTTAAAAACCCTCACATCAAAACAAACCACAAAACACACACATTACGAATTTTGTGTTTGTGTTTGTGTTTGTTCTGCATGGATTTTGGAAAACAGGGGAGCTGGGACAGTTCGAGCGATGAATATGAACCACAAGACCATCATTTGAAAGACGACACTGATAATGACCCCACAAAACGCCCTTACGAGTGCACATTTTGCAAGCGTGGATTCACTAACGCTCAAGCACTTGGTGGCCATATGAACATTCATCGCAAAGACCGAGCCAAAGCCAAACATCGCAATTTTCTTCATTCCTCTTCTTCCCATTCCAACGACCAATTTTTCCCTCCTATTCCAACTCAACCCACTCCTTCTTATTACCCTCCGCCCCCCTCTTACCGGATGTACTTCGACACCGCCGCCGCTAACTTCCCTATTCACCCACAGATCACATCCCCCACCGTTGTCAATCAAGAACTTCTCGGAGCTAATCTCAGTCTTCAAATTGACCAAAACAGAGGTGTCTGGAAAAATGAAGAAGTCGATTTGGAGCTTCGACTTGGCCATGAATATCGCTGATCCATTTATGAATTTATGATGATGAAGAACAGGGCATCCATATGAATGGGGGGTTTTCTTTTTTTCAAGTTTTTGTGTACAGCGATGGAATAAACAAGGGGGAATATGGGTTTTTGACAAAAAAATCAAGCTATATTAGCTCAGTTCTGTTTAATTTTGTTCATCTTTCTCAGAGCCAGAGCTATCAAAACATAATATTCAGTATTATTGTCATTATTAAAGAGAATCCCTTCACTCTTCATTTCTAGAAATATTAATTCTCCCTTCTTCAAGAGTCTCTCAATTTTCG

mRNA sequence

TTGTGTTTGTCTTTGTACGTGGTTTCACTTTTTGGTCTCTGTATAAAAACTCCACTTTCTAGCAGCCTTTTACCTATTGCTTTCTTTCTTCTCTTTTGTTTTTTTTTAAAAACCCTCACATCAAAACAAACCACAAAACACACACATTACGAATTTTGTGTTTGTGTTTGTGTTTGTTCTGCATGGATTTTGGAAAACAGGGGAGCTGGGACAGTTCGAGCGATGAATATGAACCACAAGACCATCATTTGAAAGACGACACTGATAATGACCCCACAAAACGCCCTTACGAGTGCACATTTTGCAAGCGTGGATTCACTAACGCTCAAGCACTTGGTGGCCATATGAACATTCATCGCAAAGACCGAGCCAAAGCCAAACATCGCAATTTTCTTCATTCCTCTTCTTCCCATTCCAACGACCAATTTTTCCCTCCTATTCCAACTCAACCCACTCCTTCTTATTACCCTCCGCCCCCCTCTTACCGGATGTACTTCGACACCGCCGCCGCTAACTTCCCTATTCACCCACAGATCACATCCCCCACCGTTGTCAATCAAGAACTTCTCGGAGCTAATCTCAGTCTTCAAATTGACCAAAACAGAGGTGTCTGGAAAAATGAAGAAGTCGATTTGGAGCTTCGACTTGGCCATGAATATCGCTGATCCATTTATGAATTTATGATGATGAAGAACAGGGCATCCATATGAATGGGGGGTTTTCTTTTTTTCAAGTTTTTGTGTACAGCGATGGAATAAACAAGGGGGAATATGGGTTTTTGACAAAAAAATCAAGCTATATTAGCTCAGTTCTGTTTAATTTTGTTCATCTTTCTCAGAGCCAGAGCTATCAAAACATAATATTCAGTATTATTGTCATTATTAAAGAGAATCCCTTCACTCTTCATTTCTAGAAATATTAATTCTCCCTTCTTCAAGAGTCTCTCAATTTTCG

Coding sequence (CDS)

ATGGATTTTGGAAAACAGGGGAGCTGGGACAGTTCGAGCGATGAATATGAACCACAAGACCATCATTTGAAAGACGACACTGATAATGACCCCACAAAACGCCCTTACGAGTGCACATTTTGCAAGCGTGGATTCACTAACGCTCAAGCACTTGGTGGCCATATGAACATTCATCGCAAAGACCGAGCCAAAGCCAAACATCGCAATTTTCTTCATTCCTCTTCTTCCCATTCCAACGACCAATTTTTCCCTCCTATTCCAACTCAACCCACTCCTTCTTATTACCCTCCGCCCCCCTCTTACCGGATGTACTTCGACACCGCCGCCGCTAACTTCCCTATTCACCCACAGATCACATCCCCCACCGTTGTCAATCAAGAACTTCTCGGAGCTAATCTCAGTCTTCAAATTGACCAAAACAGAGGTGTCTGGAAAAATGAAGAAGTCGATTTGGAGCTTCGACTTGGCCATGAATATCGCTGA

Protein sequence

MDFGKQGSWDSSSDEYEPQDHHLKDDTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFLHSSSSHSNDQFFPPIPTQPTPSYYPPPPSYRMYFDTAAANFPIHPQITSPTVVNQELLGANLSLQIDQNRGVWKNEEVDLELRLGHEYR

Homology

[Close]

BLAST of Clc05G05650 vs. NCBI nr
Match: XP_038877191.1 (zinc finger protein 7-like [Benincasa hispida])

HSP 1 Score: 314.3 bits (804), Expect = 6.0e-82
Identity = 155/165 (93.94%), Postives = 159/165 (96.36%), Query Frame = 0


Query: 1   MDFGKQGSWDSSSDEYEPQD-HHLK-DDTDNDPTKRPYECTFCKRGFTNAQALGGHMNIH 60
           MDFGKQGSWDSSSDEYEPQD HHLK DDT+NDPTKRPYECTFCKRGFTNAQALGGHMNIH
Sbjct: 1   MDFGKQGSWDSSSDEYEPQDHHHLKDDDTENDPTKRPYECTFCKRGFTNAQALGGHMNIH 60

Query: 61  RKDRAKAKHRNFLHSSS---SHSNDQFFPPIPTQPTPSYYPPPPSYRMYFDTAAANFPIH 120
           RKDRAKAKHRNF+HSSS   SHSNDQFFPPIPTQPTPSYYPPPPSYRMYFDTAAANFPIH
Sbjct: 61  RKDRAKAKHRNFIHSSSSSHSHSNDQFFPPIPTQPTPSYYPPPPSYRMYFDTAAANFPIH 120

Query: 121 PQITSPTVVNQELLGANLSLQIDQNRGVWKNEEVDLELRLGHEYR 161
           PQI SPTVVNQ+LLGANLSLQIDQNRGVWKNEE+DLELRLGHEYR
Sbjct: 121 PQIRSPTVVNQQLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR 165

[Close]

BLAST of Clc05G05650 vs. NCBI nr
Match: XP_008439363.1 (PREDICTED: zinc finger protein 7 [Cucumis melo])

HSP 1 Score: 293.1 bits (749), Expect = 1.4e-75
Identity = 151/169 (89.35%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1   MDFGKQGSWDSSSDEYEPQDHHL---KDDTDNDPTKRPYECTFCKRGFTNAQALGGHMNI 60
           MDFGKQGSWDSSSDEYEPQDHH+    DD +NDPTKRPYECTFCKRGFTNAQALGGHMNI
Sbjct: 1   MDFGKQGSWDSSSDEYEPQDHHIHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNI 60

Query: 61  HRKDRAKAKHRNFLHSSSS-HSN-DQFFPP-IPTQP-TPSYY--PPPPSYRMYFDTAAAN 120
           HRKDRAKAKHRNF+HSSSS HSN DQFFPP IPTQP TPSYY  PPPPSYRMYFDTAA N
Sbjct: 61  HRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYHHPPPPSYRMYFDTAATN 120

Query: 121 FPIHPQITSPTVVNQELLGANLSLQIDQNRGVWKNEEVDLELRLGHEYR 161
           FPIHPQITSP VVNQELLGANLSLQIDQNRGVW NEE+DLELRLGHEYR
Sbjct: 121 FPIHPQITSPAVVNQELLGANLSLQIDQNRGVWNNEELDLELRLGHEYR 169

[Close]

BLAST of Clc05G05650 vs. NCBI nr
Match: KAE8650335.1 (hypothetical protein Csa_010297 [Cucumis sativus])

HSP 1 Score: 283.1 bits (723), Expect = 1.5e-72
Identity = 151/169 (89.35%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1   MDFGKQGSWDSSSDEYEPQDH-HLK-DDTDNDPTKRPYECTFCKRGFTNAQALGGHMNIH 60
           MDFGKQGSWDSSSDEYE QDH HLK DD +NDPTKRPYECTFCKRGFTNAQALGGHMNIH
Sbjct: 90  MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIH 149

Query: 61  RKDRAKAKHRNFLHSSSS-HSN-DQFFPP-IPTQP-TPSYY--PPPPSYRMYFDTAAANF 120
           RKDRAKAKHRNF+HSSSS HSN DQFFPP IPTQP TPSYY  PPPPSYRMYFDTAA NF
Sbjct: 150 RKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYNHPPPPSYRMYFDTAATNF 209

Query: 121 PIHPQITSPTVVNQELLGANLSLQIDQNRGV-WKNEEVDLELRLGHEYR 161
           PIHPQITSP VVNQELLGANLSL+IDQ RGV WKNEE+DLELRLGHEYR
Sbjct: 210 PIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKNEELDLELRLGHEYR 258

[Close]

BLAST of Clc05G05650 vs. NCBI nr
Match: XP_004134420.3 (zinc finger protein 10 [Cucumis sativus])

HSP 1 Score: 283.1 bits (723), Expect = 1.5e-72
Identity = 151/169 (89.35%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1   MDFGKQGSWDSSSDEYEPQDH-HLK-DDTDNDPTKRPYECTFCKRGFTNAQALGGHMNIH 60
           MDFGKQGSWDSSSDEYE QDH HLK DD +NDPTKRPYECTFCKRGFTNAQALGGHMNIH
Sbjct: 1   MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIH 60

Query: 61  RKDRAKAKHRNFLHSSSS-HSN-DQFFPP-IPTQP-TPSYY--PPPPSYRMYFDTAAANF 120
           RKDRAKAKHRNF+HSSSS HSN DQFFPP IPTQP TPSYY  PPPPSYRMYFDTAA NF
Sbjct: 61  RKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYNHPPPPSYRMYFDTAATNF 120

Query: 121 PIHPQITSPTVVNQELLGANLSLQIDQNRGV-WKNEEVDLELRLGHEYR 161
           PIHPQITSP VVNQELLGANLSL+IDQ RGV WKNEE+DLELRLGHEYR
Sbjct: 121 PIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKNEELDLELRLGHEYR 169

[Close]

BLAST of Clc05G05650 vs. NCBI nr
Match: XP_022979419.1 (zinc finger protein 11-like [Cucurbita maxima])

HSP 1 Score: 268.5 bits (685), Expect = 3.8e-68
Identity = 139/173 (80.35%), Postives = 143/173 (82.66%), Query Frame = 0


Query: 1   MDFGKQGSWDSSSDEYEP-------QDHHLKDDTDNDPTKRPYECTFCKRGFTNAQALGG 60
           MDFGKQGS DSSSDEY+P       + HH K  TDNDPTKRPYECTFCKRGFTNAQALGG
Sbjct: 1   MDFGKQGSSDSSSDEYDPPPPQQHHRHHHPKHHTDNDPTKRPYECTFCKRGFTNAQALGG 60

Query: 61  HMNIHRKDRAKAKHRNFLHSSSS--HSNDQFFPPIPTQPTPSYYPPPP----SYRMYFDT 120
           HMNIHRKDRAK KHRNF HSSSS  HSNDQ FPP+ TQP   YYPPPP    SYRMYFDT
Sbjct: 61  HMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQPNIPYYPPPPQPSSSYRMYFDT 120

Query: 121 AAANFPIHPQITSPTVVNQELLGANLSLQIDQNRGVWKNEEVDLELRLGHEYR 161
           AA NFPIHPQI SP VVNQEL GANLSLQIDQ RGVW+NEEVDLELRLGHEYR
Sbjct: 121 AATNFPIHPQIRSPGVVNQELPGANLSLQIDQTRGVWENEEVDLELRLGHEYR 173

[Close]

BLAST of Clc05G05650 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 9.2e-09
Identity = 32/59 (54.24%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 10 DSSSDEYEPQDHHLKDDTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHR 69
          D  SD      H   DD+ N    R Y C+FC RGF+NAQALGGHMNIHR+DRAK + +
Sbjct: 11 DDCSDSISKNSHQGVDDSLNQ--SRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQK 67

[Close]

BLAST of Clc05G05650 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 1.0e-07
Identity = 29/52 (55.77%), Postives = 35/52 (67.31%), Query Frame = 0


Query: 34  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFLHSSSSHSNDQFFPP 86
           R Y C+FC R F +AQALGGHMN+HR+DRA+ K +    S S  S DQ  PP
Sbjct: 53  RSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQ----SLSPSSTDQATPP 100

[Close]

BLAST of Clc05G05650 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.3e-07
Identity = 33/74 (44.59%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 34  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFLHSSSSHSNDQFFPPIPTQPTPS 93
           R Y C+FCKR F +AQALGGHMN+HR+DRA+ + +    SSS+        P P  P P+
Sbjct: 45  RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSST--------PSPPYPNPN 104

Query: 94  Y------YPPPPSY 102
           Y        PPP +
Sbjct: 105 YSYSTMANSPPPHH 110

[Close]

BLAST of Clc05G05650 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.6e-06
Identity = 31/76 (40.79%), Postives = 42/76 (55.26%), Query Frame = 0


Query: 34  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRN--FLHSSSSHSNDQFFPPIPTQPT 93
           R Y C+FC+R F +AQALGGHMN+HR+DRA+ K  +  +L   SS S     P  P+   
Sbjct: 37  RSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQADDQYLFPKSSSS-----PEYPSHKD 96

Query: 94  PSYYPPPPSYRMYFDT 108
                    Y + F+T
Sbjct: 97  SDNIHETSCYTLVFNT 107

[Close]

BLAST of Clc05G05650 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.8e-05
Identity = 47/165 (28.48%), Postives = 71/165 (43.03%), Query Frame = 0


Query: 36  YECTFCKRGFTNAQALGGHMNIHRKDRAKAK------------------HRNFLHSSSSH 95
           Y C+FC+R F +AQALGGHMN+HR+DRAK +                  + NF  SSSS 
Sbjct: 49  YTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIANPNPNFSSSSSSS 108

Query: 96  SNDQFFPPIPTQPTPSYYPPPPSYRMYFD--TAAANFPIHPQITSPTVVNQEL----LGA 155
           +      P  T       P P +     D  T+     +  +     V ++E+    + A
Sbjct: 109 TTTAHLEPSLTNQRSKTTPFPSARFDLLDSTTSYGGLMMDREKNKSNVCSREIKKSAIDA 168

Query: 156 NLSLQIDQNRGVWKNEE-------------------VDLELRLGH 158
             S++ + +RG   N++                   +DLELRLG+
Sbjct: 169 CHSVRCEISRGDLMNKKDDQVMGLELGMSLRNPNQVLDLELRLGY 213

[Close]

BLAST of Clc05G05650 vs. ExPASy TrEMBL
Match: A0A1S3AZA2 (zinc finger protein 7 OS=Cucumis melo OX=3656 GN=LOC103484178 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.0e-76
Identity = 151/169 (89.35%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1   MDFGKQGSWDSSSDEYEPQDHHL---KDDTDNDPTKRPYECTFCKRGFTNAQALGGHMNI 60
           MDFGKQGSWDSSSDEYEPQDHH+    DD +NDPTKRPYECTFCKRGFTNAQALGGHMNI
Sbjct: 1   MDFGKQGSWDSSSDEYEPQDHHIHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNI 60

Query: 61  HRKDRAKAKHRNFLHSSSS-HSN-DQFFPP-IPTQP-TPSYY--PPPPSYRMYFDTAAAN 120
           HRKDRAKAKHRNF+HSSSS HSN DQFFPP IPTQP TPSYY  PPPPSYRMYFDTAA N
Sbjct: 61  HRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYHHPPPPSYRMYFDTAATN 120

Query: 121 FPIHPQITSPTVVNQELLGANLSLQIDQNRGVWKNEEVDLELRLGHEYR 161
           FPIHPQITSP VVNQELLGANLSLQIDQNRGVW NEE+DLELRLGHEYR
Sbjct: 121 FPIHPQITSPAVVNQELLGANLSLQIDQNRGVWNNEELDLELRLGHEYR 169

[Close]

BLAST of Clc05G05650 vs. ExPASy TrEMBL
Match: A0A6J1IWL0 (zinc finger protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111479150 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.8e-68
Identity = 139/173 (80.35%), Postives = 143/173 (82.66%), Query Frame = 0


Query: 1   MDFGKQGSWDSSSDEYEP-------QDHHLKDDTDNDPTKRPYECTFCKRGFTNAQALGG 60
           MDFGKQGS DSSSDEY+P       + HH K  TDNDPTKRPYECTFCKRGFTNAQALGG
Sbjct: 1   MDFGKQGSSDSSSDEYDPPPPQQHHRHHHPKHHTDNDPTKRPYECTFCKRGFTNAQALGG 60

Query: 61  HMNIHRKDRAKAKHRNFLHSSSS--HSNDQFFPPIPTQPTPSYYPPPP----SYRMYFDT 120
           HMNIHRKDRAK KHRNF HSSSS  HSNDQ FPP+ TQP   YYPPPP    SYRMYFDT
Sbjct: 61  HMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQPNIPYYPPPPQPSSSYRMYFDT 120

Query: 121 AAANFPIHPQITSPTVVNQELLGANLSLQIDQNRGVWKNEEVDLELRLGHEYR 161
           AA NFPIHPQI SP VVNQEL GANLSLQIDQ RGVW+NEEVDLELRLGHEYR
Sbjct: 121 AATNFPIHPQIRSPGVVNQELPGANLSLQIDQTRGVWENEEVDLELRLGHEYR 173

[Close]

BLAST of Clc05G05650 vs. ExPASy TrEMBL
Match: A0A6J1E9V2 (transcriptional regulator SUPERMAN-like OS=Cucurbita moschata OX=3662 GN=LOC111432102 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.5e-67
Identity = 136/170 (80.00%), Postives = 142/170 (83.53%), Query Frame = 0


Query: 1   MDFGKQGSWDSSSDEYEP----QDHHLKDDTDNDPTKRPYECTFCKRGFTNAQALGGHMN 60
           MDFGKQG+ DSSSDEY+P    Q HH    TDNDPTKRPYECTFCKRGFTNAQALGGHMN
Sbjct: 1   MDFGKQGTSDSSSDEYDPPPPQQHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMN 60

Query: 61  IHRKDRAKAKHRNFLHSSSS--HSNDQFFPPIPTQPTPSYYPPPP----SYRMYFDTAAA 120
           IHRKDRAK KHRNF HSSSS  HSNDQ FPP+ TQP   YYPPPP    SYRMYFDT+A 
Sbjct: 61  IHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQPNFPYYPPPPQPPSSYRMYFDTSAT 120

Query: 121 NFPIHPQITSPTVVNQELLGANLSLQIDQNRGVWKNEEVDLELRLGHEYR 161
           NFPIHPQI SP V NQELLGA+LSLQIDQ RGVW+NEEVDLELRLGHEYR
Sbjct: 121 NFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR 170

[Close]

BLAST of Clc05G05650 vs. ExPASy TrEMBL
Match: A0A0A0L4H6 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G141860 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.0e-62
Identity = 133/149 (89.26%), Postives = 136/149 (91.28%), Query Frame = 0


Query: 1   MDFGKQGSWDSSSDEYEPQDH-HLK-DDTDNDPTKRPYECTFCKRGFTNAQALGGHMNIH 60
           MDFGKQGSWDSSSDEYE QDH HLK DD +NDPTKRPYECTFCKRGFTNAQALGGHMNIH
Sbjct: 1   MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIH 60

Query: 61  RKDRAKAKHRNFLHSSSS-HSN-DQFFPP-IPTQP-TPSYY--PPPPSYRMYFDTAAANF 120
           RKDRAKAKHRNF+HSSSS HSN DQFFPP IPTQP TPSYY  PPPPSYRMYFDTAA NF
Sbjct: 61  RKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYNHPPPPSYRMYFDTAATNF 120

Query: 121 PIHPQITSPTVVNQELLGANLSLQIDQNR 142
           PIHPQITSP VVNQELLGANLSL+IDQ R
Sbjct: 121 PIHPQITSPAVVNQELLGANLSLEIDQTR 149

[Close]

BLAST of Clc05G05650 vs. ExPASy TrEMBL
Match: A0A6J1DD81 (zinc finger protein 8-like OS=Momordica charantia OX=3673 GN=LOC111019412 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.8e-61
Identity = 127/167 (76.05%), Postives = 137/167 (82.04%), Query Frame = 0


Query: 1   MDFGKQGSWDSSSDEYEPQDHHLKDDTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRK 60
           MDFGKQGSWDSSSDEY PQD   KD+TD DPTKRPYECTFCKRGFTNAQALGGHMNIHRK
Sbjct: 1   MDFGKQGSWDSSSDEYXPQDQVPKDETD-DPTKRPYECTFCKRGFTNAQALGGHMNIHRK 60

Query: 61  DRAKAKHRNFLHSSSSHSNDQFFPPIPTQPTPSYYPPPP------SYRMYFD-TAAANFP 120
           DRAKAK RN + SSSSHS+DQ FPPI   P  SYYPPPP      +YRMYFD TAAAN+P
Sbjct: 61  DRAKAKQRNLIPSSSSHSHDQIFPPISPHPAASYYPPPPNYHNNYNYRMYFDTTAAANYP 120

Query: 121 IHPQITSPTVVNQELLGANLSLQIDQNRGVWKNEEVDLELRLGHEYR 161
           IH   +     N++LLGANL+LQIDQ RGVWKNEE+DLELRLGHEYR
Sbjct: 121 IHRHRSQG--ANEDLLGANLTLQIDQTRGVWKNEELDLELRLGHEYR 164

[Close]

BLAST of Clc05G05650 vs. TAIR 10
Match: AT3G53820.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 65.9 bits (159), Expect = 3.5e-11
Identity = 29/42 (69.05%), Postives = 32/42 (76.19%), Query Frame = 0


Query: 34 RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFLHSSS 76
          RPY C FC+RGF+NAQALGGHMNIHRKDRAK +  N     S
Sbjct: 19 RPYICEFCERGFSNAQALGGHMNIHRKDRAKLRQANLKEEDS 60

[Close]

BLAST of Clc05G05650 vs. TAIR 10
Match: AT3G09290.1 (telomerase activator1 )

HSP 1 Score: 61.6 bits (148), Expect = 6.5e-10
Identity = 32/59 (54.24%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 10 DSSSDEYEPQDHHLKDDTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHR 69
          D  SD      H   DD+ N    R Y C+FC RGF+NAQALGGHMNIHR+DRAK + +
Sbjct: 11 DDCSDSISKNSHQGVDDSLNQ--SRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQK 67

[Close]

BLAST of Clc05G05650 vs. TAIR 10
Match: AT5G43540.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.5e-09
Identity = 53/153 (34.64%), Postives = 74/153 (48.37%), Query Frame = 0


Query: 5   KQGSWDSSSDEYEPQDHHLKDDTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRA- 64
           ++ S  +SS+    +       + +  T+R YECTFCKRGFTNAQALGGHMNIHR+DR  
Sbjct: 4   ERSSSSTSSETGAVRHRRTSSSSVSTVTRRMYECTFCKRGFTNAQALGGHMNIHRRDRLN 63

Query: 65  KAKHRNFLHSSSSHSNDQFFPPIPTQPTPSYYPPPPSYRMYFDTAAANFPIHPQITSPTV 124
           KAK +N    + S ++  F            Y    S  +   T  +N+  H +I S   
Sbjct: 64  KAKVQNDADVALSQTHRCFH----VASDLGGYEQVDS--VVLRTTTSNYIQHLRIGSMAT 123

Query: 125 VNQELLGANLSLQIDQNRGVWKNEEVDLELRLG 157
             + +              V +  E+DLELRLG
Sbjct: 124 RRENV--------------VVEGNEIDLELRLG 136

[Close]

BLAST of Clc05G05650 vs. TAIR 10
Match: AT3G23140.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 7.2e-09
Identity = 45/141 (31.91%), Postives = 68/141 (48.23%), Query Frame = 0


Query: 19  QDHHLKDDTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFLHSSSSHS 78
           +D  +   + +   +R Y+C  CKRGFTN QALGGH NIHR++R +     +  SSSS  
Sbjct: 4   RDKQIDSGSGSGENRRTYDCDICKRGFTNPQALGGHNNIHRRERER-----YPSSSSSSH 63

Query: 79  NDQFFPPIPTQPTPS---YYPPPPSYRMYFDTAAANFPIHPQITSPTVVNQELLGANLSL 138
           +  F  P+P+Q   S   +  PPP    YF T  +      Q       N +  G++ S 
Sbjct: 64  SFPFSLPLPSQSPSSSTNFTNPPP----YFPTIESYLHQGSQPPINPSHNTQYFGSSSSS 123

Query: 139 QIDQNRGVWKNEEVDLELRLG 157
           +         + +++L L LG
Sbjct: 124 RGGGRFAQGASHDLNLSLGLG 135

[Close]

BLAST of Clc05G05650 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 9.5e-09
Identity = 33/74 (44.59%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 34  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFLHSSSSHSNDQFFPPIPTQPTPS 93
           R Y C+FCKR F +AQALGGHMN+HR+DRA+ + +    SSS+        P P  P P+
Sbjct: 45  RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSST--------PSPPYPNPN 104

Query: 94  Y------YPPPPSY 102
           Y        PPP +
Sbjct: 105 YSYSTMANSPPPHH 110

The following BLAST results are available for this feature:

BLAST of Clc05G05650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877191.1	6.0e-82	93.94	zinc finger protein 7-like [Benincasa hispida]	[more]
XP_008439363.1	1.4e-75	89.35	PREDICTED: zinc finger protein 7 [Cucumis melo]	[more]
KAE8650335.1	1.5e-72	89.35	hypothetical protein Csa_010297 [Cucumis sativus]	[more]
XP_004134420.3	1.5e-72	89.35	zinc finger protein 10 [Cucumis sativus]	[more]
XP_022979419.1	3.8e-68	80.35	zinc finger protein 11-like [Cucurbita maxima]	[more]

BLAST of Clc05G05650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SR34	9.2e-09	54.24	Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1	[more]
Q9LHS9	1.0e-07	55.77	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 G...	[more]
Q38895	1.3e-07	44.59	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S...	[more]
O80942	5.6e-06	40.79	Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1	[more]
Q9SLB8	2.8e-05	28.48	Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1	[more]

BLAST of Clc05G05650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AZA2	7.0e-76	89.35	zinc finger protein 7 OS=Cucumis melo OX=3656 GN=LOC103484178 PE=4 SV=1	[more]
A0A6J1IWL0	1.8e-68	80.35	zinc finger protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111479150 PE=4 SV=...	[more]
A0A6J1E9V2	3.5e-67	80.00	transcriptional regulator SUPERMAN-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A0A0L4H6	2.0e-62	89.26	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G141860 P...	[more]
A0A6J1DD81	4.8e-61	76.05	zinc finger protein 8-like OS=Momordica charantia OX=3673 GN=LOC111019412 PE=4 S...	[more]

BLAST of Clc05G05650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53820.1	3.5e-11	69.05	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G09290.1	6.5e-10	54.24	telomerase activator1	[more]
AT5G43540.1	1.5e-09	34.64	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G23140.1	7.2e-09	31.91	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G23130.1	9.5e-09	44.59	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 36..58 e-value: 0.0097 score: 25.1
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 38..58
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 36..63 score: 11.468431
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 36..60 e-value: 2.3E-5 score: 24.3
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 11..84 e-value: 9.8E-9 score: 36.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	PANTHER	PTHR45801	OS07G0101800 PROTEIN	coord: 11..158
None	No IPR available	PANTHER	PTHR45801:SF43	C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN	coord: 11..158
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 33..62

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G05650.1	Clc05G05650.1	mRNA