Clc05G05100 (gene) Watermelon (cordophanus) v2

Overview
NameClc05G05100
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
LocationClcChr05: 3662317 .. 3662667 (+)
RNA-Seq ExpressionClc05G05100
SyntenyClc05G05100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACAAGATTCAAGACGAAATAGAGGGAGTGACATTTTCCAAGGGTATTTTGGGTATTCATTAAGAGAGGGGTATAATTGGAAACATGCACCGCATAAAAACAGGGAATTCGCCTTCGCCTCATTTTCTCCCTTCCCTACTCTCTCTCCTCTCTTTCTTTCCTTCCCTCTCTCTTCTTCTGATTTTTTTTTTTCTCGTAATCTGAACGGTTTATTTTTCTCGCTCTGCCGTCATCTCCGCCGCTCGCCGGGTGGCGCCACTGGTAAAACCGCCGTCCGTACGCCGATCCAACCAGTGCCCTCAGGTTCCATCCGCCACCATCTGGATCCGATTTCACTAAAACATTGA

mRNA sequence

ATGGAACAAGATTCAAGACGAAATAGAGGGAGTGACATTTTCCAAGGGTATTTTGGGTATTCATTAAGAGAGGGGTATAATTGGAAACATGCACCGCATAAAAACAGGGAATTCGCCTTCGCCTCATTTTCTCCCTTCCCTACTCTCTCTCCTCTCTTTCTTTCCTTCCCTCTCTCTTCTTCTGATTTTTTTTTTTCTCGTAATCTGAACGGTTTATTTTTCTCGCTCTGCCGTCATCTCCGCCGCTCGCCGGGTGGCGCCACTGGTAAAACCGCCGTCCGTACGCCGATCCAACCAGTGCCCTCAGGTTCCATCCGCCACCATCTGGATCCGATTTCACTAAAACATTGA

Coding sequence (CDS)

ATGGAACAAGATTCAAGACGAAATAGAGGGAGTGACATTTTCCAAGGGTATTTTGGGTATTCATTAAGAGAGGGGTATAATTGGAAACATGCACCGCATAAAAACAGGGAATTCGCCTTCGCCTCATTTTCTCCCTTCCCTACTCTCTCTCCTCTCTTTCTTTCCTTCCCTCTCTCTTCTTCTGATTTTTTTTTTTCTCGTAATCTGAACGGTTTATTTTTCTCGCTCTGCCGTCATCTCCGCCGCTCGCCGGGTGGCGCCACTGGTAAAACCGCCGTCCGTACGCCGATCCAACCAGTGCCCTCAGGTTCCATCCGCCACCATCTGGATCCGATTTCACTAAAACATTGA

Protein sequence

MEQDSRRNRGSDIFQGYFGYSLREGYNWKHAPHKNREFAFASFSPFPTLSPLFLSFPLSSSDFFFSRNLNGLFFSLCRHLRRSPGGATGKTAVRTPIQPVPSGSIRHHLDPISLKH
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..116

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc05G05100.2Clc05G05100.2mRNA