Clc05G04790 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGGAGGGCGGACGTCGACGGCACCTTCCAGAAAGGTTATGGTAGTGGTAGATCCTACCCGAGAGTCCGCCGCTGCGCTACAATATGCGCTTTCACATGCTGTCATTGAGAATGACCAGGTAATTCTCCTCCATGTCGATAACCCTAATTCTTGGAGGAACGCTATTTCTACGTTCCTCAAGAGACCTAATGCTGGATCTGGTAATAATAATAATCATCATAATAATGCTCATGCCGCTGCCGCTGCCACTGCCGCCTCCGACGGCGGACAAGGAGGAGGAGGAGGAGGAGGGGGACCGACGGCGGAGGTGGATTTTCTTGAGGAGATGAAGAAGGCCTGCAAGATTGCTCATCCGAAACTGAAAGTGGGGACGCTGAGAGTTGAATTGGAAGGCAAAGACAAAGCCTCCATGATTATGGCTCAAACCAAAGCTCTTGGTGTTGATCTGCTAGTCATAGGGCAGAGGCGAAGTCTCTCCACAGCAATCTTAGGGTTTGTCTTCTTCCTCCCTTCATCAAATTCATTTTCCTCCATTCATCTCCTTTCATTTTCCACTAACTGAGATTGATTGAGATAGTTTTGAATATTTATGAGCATGTATCCTGAGTCAAGTAGGCTAGATTGCTTGGTTAAGATAGTTTGTGTATTCATTTAGAAGCCAAGTGAACAAGGTTCATGGACTGTTTTGGGTTTGATGAAGTACTTAGAGGGAATAGATTCAATTCAGGGTGGTCATCAGTCTAGAATTTAATATCTTACAAGTTTTCATGGCATCCAAATATTATAGGATGGGGTAGGTGGTCACGTGACACTAGTTGAAGTACTAAGTTGGTCCGAACACTCACAAATATTAAAAAATAGTAGTAATAATAACAAATAAATAAATAAAACCAAGGTTTCATAAGGATACAAAAAGAATCAATCTAGATCACGTTATGAAGTCAAATATGTTAGGTTGATTGGGATACTATGTGGGCTAACTTGTTGACTCAAGTATGTATTGGAGATTTGGAGTCGCGTAGGTTAGGTTGTTCAAGAGATGCCATATTAGGTTGGGCAAAAATTGATAACAAAATAAAGACAATGGCAAAATTGAAGGTTTCTTAAAAAAATCATAGATCAAAATAGATTTTTTTGATAGTTCAAAACATAAGCATCATTAATTGGTTGAGTTTGAATGAGAAATCAATAACCTCTATTGGTTAATTTATTTTCTTGAAGATCTGTAACTAAATGTTGAGACACTCTTTGCTAACTATTTGATTTTTTACTTTTAAAAATTATGCATTTTCCATTATCTATTTTCTAACATTTACTAGTTGGATTAGAATGGTTCTATGAGCAACAATTTGACATGTATATATACGTATACCCTTCTGTGATTTAGGTATTTATTTTCAATTGAATATTGGAAGTTTATTTTTTTCCCTTTTTTTTAGTTCAATTATATGTGGTGGGGAGGTGGAGATTCGAACTTGTATAGATTTTTGGTTGAAAATATATGTCTCAATTAGTCAAGTTATTCTGAAGTGGACAATATTTTATTAAATGCAGATATAGACGGTCGGGAGGGCCAATGAAAGGGGCAAAAATGTTGGACACAGCAGAGTATTTGATTGAGAACAGCAAATGCACTTGTGTTGCTGTACAAAAGAAGGGTCAAAATGCAGGCTATCTTTTGAACACCAAAACCCACAGAAATTTCTGGCTCTTGGCTTGA ATGGGAGGAGGGCGGACGTCGACGGCACCTTCCAGAAAGGTTATGGTAGTGGTAGATCCTACCCGAGAGTCCGCCGCTGCGCTACAATATGCGCTTTCACATGCTGTCATTGAGAATGACCAGGTAATTCTCCTCCATGTCGATAACCCTAATTCTTGGAGGAACGCTATTTCTACGTTCCTCAAGAGACCTAATGCTGGATCTGGTAATAATAATAATCATCATAATAATGCTCATGCCGCTGCCGCTGCCACTGCCGCCTCCGACGGCGGACAAGGAGGAGGAGGAGGAGGAGGGGGACCGACGGCGGAGGTGGATTTTCTTGAGGAGATGAAGAAGGCCTGCAAGATTGCTCATCCGAAACTGAAAGTGGGGACGCTGAGAGTTGAATTGGAAGGCAAAGACAAAGCCTCCATGATTATGGCTCAAACCAAAGCTCTTGGTGTTGATCTGCTAGTCATAGGGCAGAGGCGAAGTCTCTCCACAGCAATCTTAGGATATAGACGGTCGGGAGGGCCAATGAAAGGGGCAAAAATGTTGGACACAGCAGAGTATTTGATTGAGAACAGCAAATGCACTTGTGTTGCTGTACAAAAGAAGGGTCAAAATGCAGGCTATCTTTTGAACACCAAAACCCACAGAAATTTCTGGCTCTTGGCTTGA ATGGGAGGAGGGCGGACGTCGACGGCACCTTCCAGAAAGGTTATGGTAGTGGTAGATCCTACCCGAGAGTCCGCCGCTGCGCTACAATATGCGCTTTCACATGCTGTCATTGAGAATGACCAGGTAATTCTCCTCCATGTCGATAACCCTAATTCTTGGAGGAACGCTATTTCTACGTTCCTCAAGAGACCTAATGCTGGATCTGGTAATAATAATAATCATCATAATAATGCTCATGCCGCTGCCGCTGCCACTGCCGCCTCCGACGGCGGACAAGGAGGAGGAGGAGGAGGAGGGGGACCGACGGCGGAGGTGGATTTTCTTGAGGAGATGAAGAAGGCCTGCAAGATTGCTCATCCGAAACTGAAAGTGGGGACGCTGAGAGTTGAATTGGAAGGCAAAGACAAAGCCTCCATGATTATGGCTCAAACCAAAGCTCTTGGTGTTGATCTGCTAGTCATAGGGCAGAGGCGAAGTCTCTCCACAGCAATCTTAGGATATAGACGGTCGGGAGGGCCAATGAAAGGGGCAAAAATGTTGGACACAGCAGAGTATTTGATTGAGAACAGCAAATGCACTTGTGTTGCTGTACAAAAGAAGGGTCAAAATGCAGGCTATCTTTTGAACACCAAAACCCACAGAAATTTCTGGCTCTTGGCTTGA MGGGRTSTAPSRKVMVVVDPTRESAAALQYALSHAVIENDQVILLHVDNPNSWRNAISTFLKRPNAGSGNNNNHHNNAHAAAAATAASDGGQGGGGGGGGPTAEVDFLEEMKKACKIAHPKLKVGTLRVELEGKDKASMIMAQTKALGVDLLVIGQRRSLSTAILGYRRSGGPMKGAKMLDTAEYLIENSKCTCVAVQKKGQNAGYLLNTKTHRNFWLLA Homology
BLAST of Clc05G04790 vs. NCBI nr
Match: XP_038881793.1 (homeobox protein 5 [Benincasa hispida]) HSP 1 Score: 385.2 bits (988), Expect = 3.8e-103 Identity = 205/229 (89.52%), Postives = 211/229 (92.14%), Query Frame = 0
BLAST of Clc05G04790 vs. NCBI nr
Match: XP_008438448.1 (PREDICTED: uncharacterized protein LOC103483538 [Cucumis melo] >KAA0049204.1 uncharacterized protein E6C27_scaffold171G004420 [Cucumis melo var. makuwa] >TYK17355.1 uncharacterized protein E5676_scaffold434G002120 [Cucumis melo var. makuwa]) HSP 1 Score: 379.8 bits (974), Expect = 1.6e-101 Identity = 195/220 (88.64%), Postives = 206/220 (93.64%), Query Frame = 0
BLAST of Clc05G04790 vs. NCBI nr
Match: XP_004134033.1 (uncharacterized protein LOC101222608 [Cucumis sativus] >KGN56804.1 hypothetical protein Csa_011229 [Cucumis sativus]) HSP 1 Score: 379.4 bits (973), Expect = 2.1e-101 Identity = 196/220 (89.09%), Postives = 206/220 (93.64%), Query Frame = 0
BLAST of Clc05G04790 vs. NCBI nr
Match: XP_022980405.1 (uncharacterized protein LOC111479780 [Cucurbita maxima]) HSP 1 Score: 328.9 bits (842), Expect = 3.2e-86 Identity = 177/221 (80.09%), Postives = 189/221 (85.52%), Query Frame = 0
BLAST of Clc05G04790 vs. NCBI nr
Match: KAG6582424.1 (hypothetical protein SDJN03_22426, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 326.6 bits (836), Expect = 1.6e-85 Identity = 176/229 (76.86%), Postives = 189/229 (82.53%), Query Frame = 0
BLAST of Clc05G04790 vs. ExPASy TrEMBL
Match: A0A5A7U1M3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002120 PE=4 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 7.8e-102 Identity = 195/220 (88.64%), Postives = 206/220 (93.64%), Query Frame = 0
BLAST of Clc05G04790 vs. ExPASy TrEMBL
Match: A0A1S3AWE0 (uncharacterized protein LOC103483538 OS=Cucumis melo OX=3656 GN=LOC103483538 PE=4 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 7.8e-102 Identity = 195/220 (88.64%), Postives = 206/220 (93.64%), Query Frame = 0
BLAST of Clc05G04790 vs. ExPASy TrEMBL
Match: A0A0A0L6Y4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G134530 PE=4 SV=1) HSP 1 Score: 379.4 bits (973), Expect = 1.0e-101 Identity = 196/220 (89.09%), Postives = 206/220 (93.64%), Query Frame = 0
BLAST of Clc05G04790 vs. ExPASy TrEMBL
Match: A0A6J1IW69 (uncharacterized protein LOC111479780 OS=Cucurbita maxima OX=3661 GN=LOC111479780 PE=4 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 1.6e-86 Identity = 177/221 (80.09%), Postives = 189/221 (85.52%), Query Frame = 0
BLAST of Clc05G04790 vs. ExPASy TrEMBL
Match: A0A6J1E9S8 (uncharacterized protein LOC111432005 OS=Cucurbita moschata OX=3662 GN=LOC111432005 PE=4 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 1.3e-85 Identity = 177/229 (77.29%), Postives = 189/229 (82.53%), Query Frame = 0
BLAST of Clc05G04790 vs. TAIR 10
Match: AT4G13450.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 222.6 bits (566), Expect = 3.1e-58 Identity = 122/224 (54.46%), Postives = 163/224 (72.77%), Query Frame = 0
BLAST of Clc05G04790 vs. TAIR 10
Match: AT4G13450.2 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 136.0 bits (341), Expect = 3.8e-32 Identity = 82/171 (47.95%), Postives = 117/171 (68.42%), Query Frame = 0
BLAST of Clc05G04790 vs. TAIR 10
Match: AT2G03720.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 88.2 bits (217), Expect = 9.0e-18 Identity = 64/208 (30.77%), Postives = 95/208 (45.67%), Query Frame = 0
BLAST of Clc05G04790 vs. TAIR 10
Match: AT5G17390.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 74.3 bits (181), Expect = 1.3e-13 Identity = 59/209 (28.23%), Postives = 94/209 (44.98%), Query Frame = 0
BLAST of Clc05G04790 vs. TAIR 10
Match: AT1G69080.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 72.8 bits (177), Expect = 3.9e-13 Identity = 60/212 (28.30%), Postives = 97/212 (45.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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