Clc05G04620 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAGAAGTGAAGGTCCATGGAACTTGGCCAAGCCCTTACGCTTACAGAGTCATTTGGGCTCTGGCTCTCAAAGGCATTCCATACGAATACATAGAAGAAGATCTCGCCAACAAAAGCCCTCTACTCTTACAGTACAATCCCGTTCACAAGAAGATTCCAGTGCTCGTCCATGGCGGAAACACTATCTGCGAATCCATGATCATTCTCGAGTACGTCGAAGAAACATGGCCGCAAAATCCCTTGCTGCCTTCCGAACCTTTCGAAAGAGCCACCGCTCGATTCTGGATCAAATTCATTGAGGATAAGGTACGATCATGATGTTCACAAATCGAAATTACATACTTAATTGAATTTGATTGGTGGTTTGGTAATTTTAGGGCTCAGCGATTTTTATGATATTTCGTGCGAAGAATGAGGAAGAACGGGAGGTTGCGAAGAATCAGAGCTTGGAGATGCTGAGAACCGTCGAGGAATGGGGATTCGACGGCGGAAAAAGGAAATTTTTCGGCGGAGATGAGATCGGAATGGCGGATTTGGCGTTCGGCGGGATTGCGTATTGGTTGGGAATGATTGAACAAGTGACGGGAGTGAAAGTGTTGGACGCCGATGAGTTCCCTCGGGTGTATGCTTGGGCTGGAAGATTCAGGGAAGCGCCGGTGATCAGAGATAATCTGCCGGATTGGAACCTAATGACGGCGGCTTTCCGGCGCCGGAGGGAGCAACTGCTGCAATCTGCAGCAGATAATTAGAATCGAAGAAATGTGTCTGTTTTTGTTTACAATAATAATAATAAATTAATTAAAAAAAAATGCCCCATATTTGTAATATGTGTAAAAAAAAAAAAAAAGAAAAAGAAAATTTGAATTTTTAAAAGTTAAAAAAATATCCAAACTTAAAAAAAAAAAAATAAAAAATAAAAAAAAATCAAACATCTTCTTTATCGGTTTTGTTTCAAAAGTATTTTTAAACTATTTTTCAAAAAAACTTAAGGATATCTTTTTAAATAAATTTAAGATATTTTTAAAATTAACCGTATCGGTTTCTCTTTGTATACCTTTTTTATTTTTATTTTTATTTTTTAAATGAAAGGATCTTTTTCAAACTTTCAAAAGTTTAGTGTATATTTAATGGTTTACATATAAAATTAATGATAAAAGTATTTTTAAACTATTTAAAATTATTTTAAAAACTTTTGAAAGTTAATGAATACTTTCTACAAAAAGTAACCTAATAATAATTATATTAAATTGTTATTTTTGTTCTAATGTTTGGAATAAATTATTATAAAATTAAAATTTCAAGGGCTAAATTGTTACACTTCAGAGTTCTCGGAATAAAATGTTACATACATAAAAGTTATGAGACCAAAAGTTATTTATAATCTAATAAATACACATAATTCCATACAATAAAAACATGTGAATATGTTTCCAAAATTTATAGTAAAAATGTCAATAGATCACAATAAAAAAAAAAAAAGTTTTAAAAAATCAACAATAAACTAGTATTATAGACAACATTTATAATTTATTGAAAATATATGGATTAAAATTAGACATTGAGAGACTAATATTGAACAAGTATTAAAGTATAAATATGAAAACAATATTTCAACCTAAAAATAGATAACACTAGAAAAAGCTATTTAACATGACTAGTATATCCACTTTGGTCTTGTCGTTAGCATGTTGATGAAATGTTTGGTCTATCGACTTCATAAATCGGTATTAAATTAATTCAATATCACCAACTTTAATAATATTCACTATTGAAATTTGAACATTTATCTAAAATTCTATTTCCTGATCTTTCTTTTTACACATTATTAGTTTTTCACTCTCTCATCCACAAATAACGTCTTTTTTAGCCGTTTTAATGACTCATCTTGGTGGCTATAAATCAATATCAAGACCAAAACAAAATCTTTAACTTATCCAAAAAAAGAAAAAAAAGAGTCAATTTATACGTTTTTCTTTTGATAAATGAGAAAGAAATTCCCTCGTCTTCTCGATTTTCGTTTGGTTTCTCTCAACAAACACAAACACTAGAAATAAGAAAGTGGAGAAAGGGTTATGTTTTTGTGAATCAATTCCTTCTTCCAACAAAGTATGTATTTTTAAATAATATAATCAAATGTCGAATGGTGTACGAAAGTAGTATCAAGTATGTACTATTGTCGTAGTGAAATCATTAGAAAATTTTATAGTAATAAAGGAATATCATAGTCCCTTTTTTCAAACTATAAATTTATTAATCCTTACATTAATGTGAGTCCATTTCCCTTTTAAAAGTAGGTTGATGTGGTGTACAACAAATGAAAATTTTTCATTCCCATTTTTCATGATATTATTTTATTTAGACCTCATATTATGTATTTATTTTACTCATTTTTTGACACATCATTAGATAATATAATATAATTTTATCAATGAGTCTTATATAATAATTCATAAATGTTTCTTTTACGAAGATAGATGAAGATAATATAGAAAATTGTTCATGATATCGTAGCTTTAAATAATTTTTAAATAGGCATATATCCACACGGACATTTGAGGAGGACACTCTAAACATTGGAAAAAAAAATCTAATACTATTATAATACATATTATCCAATTTATTATTGGACACATCATTAAATAATTAAATAATTTATTTTGTATACCTATTGTAGTATAAACAAATTTTCATAGTTGGAGTGTACAATAAATTTTATCTAAATATTGACCTAATTTCATTATCAATGTACACCGAGTAACTTTGTTTTGAATAAATTTCTAAATATTTAATTTAAAACATAAATTCTTTTGAAAAAAATTTAATAAATTTCGAATAAATAAATTAACTTAGGATAAATACTAGAAACTAACTTTTAGAAAAATGAGTTTTGAGTATTTAATGGTTAGTCTCCCCCTAATTTCTCACTTCTACTAAGTGGCTACCATTGCCCTCTGCCGGGTCACTTTCAATGACCACCATCGATAACATACTCTAGTGACCATCATTGTTGGCCAATTTTGGTGACCACCATCGACTGTCATTTTTAGGCAACCACCATTGATCAATTATGGCTACTATTGGCAGTGGCCACTACGACTACCATCCTTGGTCAAGCTCCATCCACCACCTTCGCTTCCAACAATCAACTCTAGCAATTGTTGTAGGCATACTCTGACCATCACTTCTAGAGACTGCCACCATCCAACGCTGGCCACCACAACTGATGACTAACTTCACCGACCACTCCATACGAACACCTCCAACAACCAGTATTTTAAACTATTAATTCATAGTATTTTAGATTCATTATTTAATAGTAGTTTGACATTAATAAAAACACTACATATAAAAAACAAAACAAATTTGTATATAAAAATAAAAAATGTTGTCAAACATAAGTATTTTTATTTAAAAGAGTTTTTATCAAAAGTTTTTAAACCAAAATAAATATTTAATTTTTTTTCTAAGTCATTTCAAAGAAGCTCTTGGTATGTTTTGATGTTTATAGTTTAGTTAGGTACCACAAATCATTTCTGACTAATCTTTTACCCTTATTTTCTTCAAATTGAACTAAGCTATGGAGACAAAATTGCAATAACGTTGAACGTTACTTTTAAAACATTCATTTGTCATATACTTTTGTTCTTTTTAGTATGTGTAGTATTAATTTGGTGTATTATAGTGTTCGCCATTTAAAATCATTTGAAAACACAATTCAAACCAACTCAGAAATTTAAGAGTATTTTAGTATTTAATTAAGAATAAATGGAGCGAAAAATTCAAAGACGCATATGGTTTATTTAAACCCATTTTTTTAGTTGATTTTCCATAGCTTTGATTCTTGAAAAAGCTCAAGAAAAAGCACTACAAAAGCGATTACCTCAGTTTCTGAACTTGAAAATCCTCCATTGAAGATGACAGAAGTGAAGGTCCATGGAACTTGGCCAAGCCCTTACGCTTACAGAGTCATTTGGGCTCTGGCTCTCAAAGGCATTCCATACGAATACATAGAAGAAGATCTCGCCAACAAAAGCCCTCTACTCTTACAGTACAATCCCGTTCACAAGAAGATTCCAGTGCTCGTCCATGGCGGAAACCCTATCTGCGAATCCATGATCATTCTCGAGTACGTCGAAGAAACATGGCCGCAAAATCCCTTGCTGCCTTCCGATCCTTTCGAAAGAGCCACCGCTCGATTCTGGATCAAATTCATTGAGGATAAGGTACGATCATGATGTTCACAAATCGAAATTACATACTTAATTGAATTTGATTGGTGGTTTGGTAATTTTAGGGCTCAGCGATTTTTATGATATTTCGTGCGAAGAATGAGGAAGAACGTGAGGTTGCGAAGAATCAGAGCTTGGAGATGCTGAGAACCGTAGAGGAATGGGGATTCGACGGCGGAAAAAGGAAATTTTTCGGCGGAGATGAGATCGGAATGGCGGATTTGGCGTTCGGCGGGATTGCGTATTGGTTGGGAATGATTGAACAATTGACGGGAGTGAAATTGTTGGACGCCGGTGACTTCCCTCGGGTGTATGCTTGGACTGAAAGATTCAGGGAAGCGCCGGTGATCAGAGATAATCTGCCGGATTGGAACCATGTGGCGGCGACTTTCCGGCGCCGGAAGGAGGAAATGCTGCAATCTGCAGAAGATAATTAG ATGACAGAAGTGAAGGTCCATGGAACTTGGCCAAGCCCTTACGCTTACAGAGTCATTTGGGCTCTGGCTCTCAAAGGCATTCCATACGAATACATAGAAGAAGATCTCGCCAACAAAAGCCCTCTACTCTTACAGTACAATCCCGTTCACAAGAAGATTCCAGTGCTCGTCCATGGCGGAAACACTATCTGCGAATCCATGATCATTCTCGAGTACGTCGAAGAAACATGGCCGCAAAATCCCTTGCTGCCTTCCGAACCTTTCGAAAGAGCCACCGCTCGATTCTGGATCAAATTCATTGAGGATAAGGGCTCAGCGATTTTTATGATATTTCGTGCGAAGAATGAGGAAGAACGGGAGGTTGCGAAGAATCAGAGCTTGGAGATGCTGAGAACCGTCGAGGAATGGGGATTCGACGGCGGAAAAAGGAAATTTTTCGGCGGAGATGAGATCGGAATGGCGGATTTGGCGTTCGGCGGGATTGCGTATTGGTTGGGAATGATTGAACAAGTGACGGGAGTGAAAGTGTTGGACGCCGATGAGTTCCCTCGGGTGTATGCTTGGGCTGGAAGATTCAGGGAAGCGCCGATGACAGAAGTGAAGGTCCATGGAACTTGGCCAAGCCCTTACGCTTACAGAGTCATTTGGGCTCTGGCTCTCAAAGGCATTCCATACGAATACATAGAAGAAGATCTCGCCAACAAAAGCCCTCTACTCTTACAGTACAATCCCGTTCACAAGAAGATTCCAGTGCTCGTCCATGGCGGAAACCCTATCTGCGAATCCATGATCATTCTCGAGTACGTCGAAGAAACATGGCCGCAAAATCCCTTGCTGCCTTCCGATCCTTTCGAAAGAGCCACCGCTCGATTCTGGATCAAATTCATTGAGGATAAGAATCAGAGCTTGGAGATGCTGAGAACCGTAGAGGAATGGGGATTCGACGGCGGAAAAAGGAAATTTTTCGGCGGAGATGAGATCGGAATGGCGGATTTGGCGTTCGGCGGGATTGCGTATTGGTTGGGAATGATTGAACAATTGACGGGAGTGAAATTGTTGGACGCCGGTGACTTCCCTCGGGTGTATGCTTGGACTGAAAGATTCAGGGAAGCGCCGGTGATCAGAGATAATCTGCCGGATTGGAACCATGTGGCGGCGACTTTCCGGCGCCGGAAGGAGGAAATGCTGCAATCTGCAGAAGATAATTAG ATGACAGAAGTGAAGGTCCATGGAACTTGGCCAAGCCCTTACGCTTACAGAGTCATTTGGGCTCTGGCTCTCAAAGGCATTCCATACGAATACATAGAAGAAGATCTCGCCAACAAAAGCCCTCTACTCTTACAGTACAATCCCGTTCACAAGAAGATTCCAGTGCTCGTCCATGGCGGAAACACTATCTGCGAATCCATGATCATTCTCGAGTACGTCGAAGAAACATGGCCGCAAAATCCCTTGCTGCCTTCCGAACCTTTCGAAAGAGCCACCGCTCGATTCTGGATCAAATTCATTGAGGATAAGGGCTCAGCGATTTTTATGATATTTCGTGCGAAGAATGAGGAAGAACGGGAGGTTGCGAAGAATCAGAGCTTGGAGATGCTGAGAACCGTCGAGGAATGGGGATTCGACGGCGGAAAAAGGAAATTTTTCGGCGGAGATGAGATCGGAATGGCGGATTTGGCGTTCGGCGGGATTGCGTATTGGTTGGGAATGATTGAACAAGTGACGGGAGTGAAAGTGTTGGACGCCGATGAGTTCCCTCGGGTGTATGCTTGGGCTGGAAGATTCAGGGAAGCGCCGATGACAGAAGTGAAGGTCCATGGAACTTGGCCAAGCCCTTACGCTTACAGAGTCATTTGGGCTCTGGCTCTCAAAGGCATTCCATACGAATACATAGAAGAAGATCTCGCCAACAAAAGCCCTCTACTCTTACAGTACAATCCCGTTCACAAGAAGATTCCAGTGCTCGTCCATGGCGGAAACCCTATCTGCGAATCCATGATCATTCTCGAGTACGTCGAAGAAACATGGCCGCAAAATCCCTTGCTGCCTTCCGATCCTTTCGAAAGAGCCACCGCTCGATTCTGGATCAAATTCATTGAGGATAAGAATCAGAGCTTGGAGATGCTGAGAACCGTAGAGGAATGGGGATTCGACGGCGGAAAAAGGAAATTTTTCGGCGGAGATGAGATCGGAATGGCGGATTTGGCGTTCGGCGGGATTGCGTATTGGTTGGGAATGATTGAACAATTGACGGGAGTGAAATTGTTGGACGCCGGTGACTTCCCTCGGGTGTATGCTTGGACTGAAAGATTCAGGGAAGCGCCGGTGATCAGAGATAATCTGCCGGATTGGAACCATGTGGCGGCGACTTTCCGGCGCCGGAAGGAGGAAATGCTGCAATCTGCAGAAGATAATTAG MTEVKVHGTWPSPYAYRVIWALALKGIPYEYIEEDLANKSPLLLQYNPVHKKIPVLVHGGNTICESMIILEYVEETWPQNPLLPSEPFERATARFWIKFIEDKGSAIFMIFRAKNEEEREVAKNQSLEMLRTVEEWGFDGGKRKFFGGDEIGMADLAFGGIAYWLGMIEQVTGVKVLDADEFPRVYAWAGRFREAPMTEVKVHGTWPSPYAYRVIWALALKGIPYEYIEEDLANKSPLLLQYNPVHKKIPVLVHGGNPICESMIILEYVEETWPQNPLLPSDPFERATARFWIKFIEDKNQSLEMLRTVEEWGFDGGKRKFFGGDEIGMADLAFGGIAYWLGMIEQLTGVKLLDAGDFPRVYAWTERFREAPVIRDNLPDWNHVAATFRRRKEEMLQSAEDN Homology
BLAST of Clc05G04620 vs. NCBI nr
Match: TXG72486.1 (hypothetical protein EZV62_001065 [Acer yangbiense]) HSP 1 Score: 532.3 bits (1370), Expect = 3.5e-147 Identity = 261/450 (58.00%), Postives = 320/450 (71.11%), Query Frame = 0
BLAST of Clc05G04620 vs. NCBI nr
Match: GAY42314.1 (hypothetical protein CUMW_065850 [Citrus unshiu]) HSP 1 Score: 487.3 bits (1253), Expect = 1.3e-133 Identity = 235/445 (52.81%), Postives = 309/445 (69.44%), Query Frame = 0
BLAST of Clc05G04620 vs. NCBI nr
Match: GAY42312.1 (hypothetical protein CUMW_065860 [Citrus unshiu]) HSP 1 Score: 485.0 bits (1247), Expect = 6.5e-133 Identity = 235/451 (52.11%), Postives = 309/451 (68.51%), Query Frame = 0
BLAST of Clc05G04620 vs. NCBI nr
Match: GAY40186.1 (hypothetical protein CUMW_050100 [Citrus unshiu]) HSP 1 Score: 484.6 bits (1246), Expect = 8.4e-133 Identity = 237/440 (53.86%), Postives = 298/440 (67.73%), Query Frame = 0
BLAST of Clc05G04620 vs. NCBI nr
Match: GAY42316.1 (hypothetical protein CUMW_065880 [Citrus unshiu]) HSP 1 Score: 483.8 bits (1244), Expect = 1.4e-132 Identity = 231/438 (52.74%), Postives = 307/438 (70.09%), Query Frame = 0
BLAST of Clc05G04620 vs. ExPASy Swiss-Prot
Match: P32111 (Probable glutathione S-transferase OS=Solanum tuberosum OX=4113 GN=PRP1 PE=2 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.9e-50 Identity = 94/192 (48.96%), Postives = 137/192 (71.35%), Query Frame = 0
BLAST of Clc05G04620 vs. ExPASy Swiss-Prot
Match: Q03662 (Probable glutathione S-transferase OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 6.0e-49 Identity = 93/192 (48.44%), Postives = 131/192 (68.23%), Query Frame = 0
BLAST of Clc05G04620 vs. ExPASy Swiss-Prot
Match: Q9FQA3 (Glutathione transferase GST 23 OS=Zea mays OX=4577 PE=2 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 8.7e-48 Identity = 96/191 (50.26%), Postives = 132/191 (69.11%), Query Frame = 0
BLAST of Clc05G04620 vs. ExPASy Swiss-Prot
Match: Q03664 (Probable glutathione S-transferase OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 8.7e-48 Identity = 96/221 (43.44%), Postives = 134/221 (60.63%), Query Frame = 0
BLAST of Clc05G04620 vs. ExPASy Swiss-Prot
Match: P32110 (Probable glutathione S-transferase OS=Glycine max OX=3847 GN=HSP26-A PE=2 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 4.3e-47 Identity = 93/225 (41.33%), Postives = 138/225 (61.33%), Query Frame = 0
BLAST of Clc05G04620 vs. ExPASy TrEMBL
Match: A0A5C7IVE0 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_001065 PE=4 SV=1) HSP 1 Score: 532.3 bits (1370), Expect = 1.7e-147 Identity = 261/450 (58.00%), Postives = 320/450 (71.11%), Query Frame = 0
BLAST of Clc05G04620 vs. ExPASy TrEMBL
Match: A0A2H5NQ73 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_065850 PE=4 SV=1) HSP 1 Score: 487.3 bits (1253), Expect = 6.3e-134 Identity = 235/445 (52.81%), Postives = 309/445 (69.44%), Query Frame = 0
BLAST of Clc05G04620 vs. ExPASy TrEMBL
Match: A0A2H5NQC5 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_065860 PE=4 SV=1) HSP 1 Score: 485.0 bits (1247), Expect = 3.1e-133 Identity = 235/451 (52.11%), Postives = 309/451 (68.51%), Query Frame = 0
BLAST of Clc05G04620 vs. ExPASy TrEMBL
Match: A0A2H5NJ52 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_050100 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 4.1e-133 Identity = 237/440 (53.86%), Postives = 298/440 (67.73%), Query Frame = 0
BLAST of Clc05G04620 vs. ExPASy TrEMBL
Match: A0A6N2MY56 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS426179 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 4.1e-133 Identity = 227/396 (57.32%), Postives = 297/396 (75.00%), Query Frame = 0
BLAST of Clc05G04620 vs. TAIR 10
Match: AT3G09270.1 (glutathione S-transferase TAU 8 ) HSP 1 Score: 184.5 bits (467), Expect = 1.7e-46 Identity = 87/191 (45.55%), Postives = 130/191 (68.06%), Query Frame = 0
BLAST of Clc05G04620 vs. TAIR 10
Match: AT2G29420.1 (glutathione S-transferase tau 7 ) HSP 1 Score: 177.6 bits (449), Expect = 2.1e-44 Identity = 81/186 (43.55%), Postives = 121/186 (65.05%), Query Frame = 0
BLAST of Clc05G04620 vs. TAIR 10
Match: AT2G29490.1 (glutathione S-transferase TAU 1 ) HSP 1 Score: 169.9 bits (429), Expect = 4.3e-42 Identity = 83/192 (43.23%), Postives = 123/192 (64.06%), Query Frame = 0
BLAST of Clc05G04620 vs. TAIR 10
Match: AT2G29450.1 (glutathione S-transferase tau 5 ) HSP 1 Score: 168.7 bits (426), Expect = 9.6e-42 Identity = 86/188 (45.74%), Postives = 123/188 (65.43%), Query Frame = 0
BLAST of Clc05G04620 vs. TAIR 10
Match: AT1G78320.1 (glutathione S-transferase TAU 23 ) HSP 1 Score: 168.3 bits (425), Expect = 1.2e-41 Identity = 83/183 (45.36%), Postives = 121/183 (66.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|