Clc05G04510 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G04510
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	glycine-rich protein
Location	ClcChr05: 3281502 .. 3284934 (+)
RNA-Seq Expression	Clc05G04510
Synteny	Clc05G04510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGGGGGGTGCCGCTGGGATCGGAAAATTTGGTGGAATTGGTGGGGTCGCTGGAATTGGTAGCTTGGGTGGCCCCGGCGGTCTGGGCGGCGGAGGAGCTGGTGGCGCCGGCGGTTTGGGTGGCGGAGGAGCTAGCGGAATCGGCGGTTTAGCTGGGCATGGACTTGGCGGAGCTGGCGGAATAGGTGGTCTAGCTGGACATGGACTTGGTGGGGCTGGGGGTGTTGGAGGCGGCAGTGGCGTCGGCGGAGACGGCGGAGCTGGCGGTGGTCCGGTGAGTGGCGCAGTTCGCCCATAAGTTCTAAAAAGAAAATATGTAATGTTTTTAATTATTAGGAGAGTTTGTTGTGGTGTTGGTTGAAGCTCATGTAGGGATTTTGATTTTTGTGTGTTTGCAAAAAGGTGGCGGTTTTGTGTTCAAAGTTATGCATGCATGCATGCACGTACTATGTTCCCCTCTTCCATAAATAAATATTTCTTTTTCCAAATACCAAACTTTCAAATCTTAATTTCCATTTAGGATATTCTAGTATTATCACAATTATATGTCTTAACTAGTTGAAAATTTATCGGTCACCTCAAAATACTTTTTTCAATATATAGTGCTATTTGTTTTATAGCATTTCGGTTTATGAGCAGTTACTAAGTGCATTCCATGTTGCACTATATCATGCGGTCAATCTTTTGTAACATATATAGTAAATAATATAGTAATAATTCAATTTTATAAAAAAAAATAGGAAAATCATTATAAATAAAAAAAAAATATAGCGAAATCTGTGATAGACCGCGTAGACTCAGATCGACATCTATTCATGTCTATTTAGCAGAGTGATAAATGTCTTTTTGAGTCTATCACGGTTTATCACCGATAGAAAGTAAAATTGTGCTATATTTATAATTATTTTCTATCGTTTTTTCTATTTTTGAAACATCTCTAAAAAAATATGTGTATTTATTATATGGTAAATTTTAATTTGGTAATTGGATGGGCTGCATCGTGCAACACTTAAATATTTTTCTTGTTTTATTTTATAGATCTGATATACTTCTTGAATATATTAATTATTTTATGGGAAGCAATAAAGTAGTATGGCCAAAATGAGCCAAGCTCACAATGATGCGATGATTATATTGTACTATTGGTCTTGACGTTAGAAGTTCGATTATTCTTCTATACCACATATTTTTAGAAGAACAAAGGAGTAATATGAACTACTAACGATATTAGAAAATTTTCCAACATAACATAGCTCATCGATTAAGATATATAGAAATTTTATTTTTTTTCAAATTAAAAATTCAAATTCCATTTATTATTCTCACATTTGTGGAGAAAAAAAGTATAGAAGAGTTATGATCTTTTTTTAAGATTTAGAAAAATATTTGCATATATTTCGGACTGCACCCATATTTTACCATCGAGTCAAGATAAATAATATTAATCCTTCTTTCGTAAAAGTTATTTAAAAAAAAAAAAACAAACGAGATACACCTTGTCAAGGGATATGAAAATTGGTCCGACATAATAAATTAAAAAAAAATCAAAATATAAAATAAAGATAAATTTTGATGTAATCTTAGGAGGGTTAAGTGAAGCCCTAGATCCAAATTTCATTAAGGACTCCATGTAAGGTACTTAAAACTTCTTATATATTTTTTCTTATAATATCCTGAACAAAATTATGTTGCTTCAAGTTTTGTTTTTCTCAAACTATAAATTTAATGTTGATGTCACGTAAAGACCATATGCATTTTTTTTTTTTTTAAATTTGGCATCAACCCATCGGAGAGATTGAGGTAGGAGTTTATTAGAAACTTGCTCTGGTTACAGAAACACACATCCATATAGTTTGGCCTAAGTTTGTTGATGGTGAATTGGAAGAAAGAAATCGAATTAAGGTGATTACCCAAAGGTTCAGTGTATTGAATGATGATTTTTGCATGGCCACCACCTGTAAGATCCTGCCCCTTTCTAACCAAACCACCACAGTTTCGTCTTTCAATATAGAAGAGAGAAATTGCAAAAATTATTTACCGTAAATTTATATCGAGCAGTTATTTGAGTCTACCGTTTAAATCCAACCATTAATATGATGTAATTACATGTCCACAATGCGGCAGTTTTATGGAATAAACTTTTTATTTTTCACTAACTTTTGGTGTATAAACTTCGTGATTTGGTCTAGTTTCAAATTTATAACAATTTAGTTCATGAAGTACGAAAAAAATTATCAAAAATTAAATGTTAATTTTTATTATTTTATGATGTAGATATTTTGTATTTTATAAAAATATTGAGCGTTTAATTAGTCTATCTAGAATTATTTAAACAATAATCTTAACATTAATTTATACGAAAAATACTAAATTGTTACAAAATTTAAAGTACAATAGCTAAATTACTAAATCGTGAAGTTCAATAACTAAATTGTTACAAAATTAAAAGTTCAAAAACTAAATTGTTACAAACAAAATTTCAGAGACTAAATTGTTACAAACAAAAAATTAAAGATTAAATTGTTACTTTTATTAGAATTACGTTTGAGCATGTTAATAACTACGAGATTTGTTGTTTTACAAGAAAATAAAAAAAAAATCAACAAATTCAACTAATTGGTATCATGAAAAAGAAATGAAAATGGTTGCATGCATATTTTTCCAAAAGTGGCGAACTTTTATTTCTTCTTTACTTTCTTTTATCTATTACATATCCATTAATTTTGTTAAATGGGTTGTAATTGTGGTCGTGGGACATGTATTTGGATTTTATAGTCCAAGACGTACGCAGCTAAGTATTGTTTAAAAAATTTAACCAAACCGCTAATTGAATCATTCAAGTTTTTGGACTATCATATTGGTTCAACAAACACTGAATAAAATGGACTACTTAACTCACGAACGACAAAGCAAAAATACGACCTAGTATTAAATAATACATTCGTCCAATAGAGTGACAATACTTTTATTTATCATTTCAAAAGATCGATGGTTGAATCTTCCCGTTACAAACCATTGAGTCATGTTGTGTCAAATCGAATGGCCACAAGGGCGCCACGTCGGTAGCCAAATCAAAGGTTCCACAGCCTCTTTGTCGAGCTAAGATCTCCACAAATGCCATAAACGCCCAAAAGAAAATATCCCAAATTCTCTCTATAAATAACAACAACAACAACTCACTTCCTATATATCCTTATCCTAATCCCCATATGGCTCGACCCGGAATTTTCCTCTGTTTCTTGGCTTTGATCGTAACCAGTAGCTTAGCTCAGCAGCAGCCCAACGCCGGTGGCGGCACAGAAACTATTACTGTACAAGGCGGCGGTGGCGGTGGCGGAGGCGGAGGTGGCGGAGGTGGATCGAGTAGTGGTCCTGGCACAGGCTCCGGTGAAGGGCATGGGTCGGGGAGAGGTGGTGGGTCGGGTCGATAG

mRNA sequence

ATGCTGGGGGGTGCCGCTGGGATCGGAAAATTTGGTGGAATTGGTGGGGTCGCTGGAATTGGTAGCTTGGGTGGCCCCGGCGGTCTGGGCGGCGGAGGAGCTGGTGGCGCCGGCGGTTTGGGTGGCGGAGGAGCTAGCGGAATCGGCGGTTTAGCTGGGCATGGACTTGGCGGAGCTGGCGGAATAGGTGGTCTAGCTGGACATGGACTTGGTGGGGCTGGGGGTGTTGGAGGCGGCAGTGGCGTCGGCGGAGACGGCGGAGCTGGCGGTGGAGAGTTTGTTGTGGTGTTGGTTGAAGCTCATGTAGGGATTTTGATTTTTGTGTGTTTGCAAAAAGGTGGCGGTTTTGTGTTCAAAGTTATGCATGCATGCATGCACGGCGCCACGTCGGTAGCCAAATCAAAGGTTCCACAGCCTCTTTGTCGAGCTAAGATCTCCACAAATGCCATAAACGCCCAAAAGAAAATATCCCAAATTCTCTCTATAAATAACAACAACAACAACTCACTTCCTATATATCCTTATCCTAATCCCCATATGGCTCGACCCGGAATTTTCCTCTGTTTCTTGGCTTTGATCGTAACCAGTAGCTTAGCTCAGCAGCAGCCCAACGCCGGTGGCGGCACAGAAACTATTACTGTACAAGGCGGCGGTGGCGGTGGCGGAGGCGGAGGTGGCGGAGGTGGATCGAGTAGTGGTCCTGGCACAGGCTCCGGTGAAGGGCATGGGTCGGGGAGAGGTGGTGGGTCGGGTCGATAG

Coding sequence (CDS)

ATGCTGGGGGGTGCCGCTGGGATCGGAAAATTTGGTGGAATTGGTGGGGTCGCTGGAATTGGTAGCTTGGGTGGCCCCGGCGGTCTGGGCGGCGGAGGAGCTGGTGGCGCCGGCGGTTTGGGTGGCGGAGGAGCTAGCGGAATCGGCGGTTTAGCTGGGCATGGACTTGGCGGAGCTGGCGGAATAGGTGGTCTAGCTGGACATGGACTTGGTGGGGCTGGGGGTGTTGGAGGCGGCAGTGGCGTCGGCGGAGACGGCGGAGCTGGCGGTGGAGAGTTTGTTGTGGTGTTGGTTGAAGCTCATGTAGGGATTTTGATTTTTGTGTGTTTGCAAAAAGGTGGCGGTTTTGTGTTCAAAGTTATGCATGCATGCATGCACGGCGCCACGTCGGTAGCCAAATCAAAGGTTCCACAGCCTCTTTGTCGAGCTAAGATCTCCACAAATGCCATAAACGCCCAAAAGAAAATATCCCAAATTCTCTCTATAAATAACAACAACAACAACTCACTTCCTATATATCCTTATCCTAATCCCCATATGGCTCGACCCGGAATTTTCCTCTGTTTCTTGGCTTTGATCGTAACCAGTAGCTTAGCTCAGCAGCAGCCCAACGCCGGTGGCGGCACAGAAACTATTACTGTACAAGGCGGCGGTGGCGGTGGCGGAGGCGGAGGTGGCGGAGGTGGATCGAGTAGTGGTCCTGGCACAGGCTCCGGTGAAGGGCATGGGTCGGGGAGAGGTGGTGGGTCGGGTCGATAG

Protein sequence

MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGGGSGVGGDGGAGGGEFVVVLVEAHVGILIFVCLQKGGGFVFKVMHACMHGATSVAKSKVPQPLCRAKISTNAINAQKKISQILSINNNNNNSLPIYPYPNPHMARPGIFLCFLALIVTSSLAQQQPNAGGGTETITVQGGGGGGGGGGGGGGSSSGPGTGSGEGHGSGRGGGSGR

Homology

[Close]

BLAST of Clc05G04510 vs. NCBI nr
Match: KAE8650313.1 (hypothetical protein Csa_010764 [Cucumis sativus])

HSP 1 Score: 89.4 bits (220), Expect = 5.0e-14
Identity = 78/91 (85.71%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 1   MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAG 60
           MLGG+AGIGKFGGIGGVAGIGSLG PGGLGGGGAG     G GGASGIGGLAGHGLGGAG
Sbjct: 70  MLGGSAGIGKFGGIGGVAGIGSLGDPGGLGGGGAGP----GVGGASGIGGLAGHGLGGAG 129

Query: 61  GIGGLAGHGLGGAGGVGGGSGVGGDGGAGGG 92
           GIGGLAGHGLGGAGGVG GSG+GG GG+ GG
Sbjct: 130 GIGGLAGHGLGGAGGVGTGSGIGGIGGSNGG 156

[Close]

BLAST of Clc05G04510 vs. NCBI nr
Match: XP_011652752.1 (glycine-rich protein 23 [Cucumis sativus])

HSP 1 Score: 89.4 bits (220), Expect = 5.0e-14
Identity = 78/91 (85.71%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 1   MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAG 60
           MLGG+AGIGKFGGIGGVAGIGSLG PGGLGGGGAG     G GGASGIGGLAGHGLGGAG
Sbjct: 76  MLGGSAGIGKFGGIGGVAGIGSLGDPGGLGGGGAGP----GVGGASGIGGLAGHGLGGAG 135

Query: 61  GIGGLAGHGLGGAGGVGGGSGVGGDGGAGGG 92
           GIGGLAGHGLGGAGGVG GSG+GG GG+ GG
Sbjct: 136 GIGGLAGHGLGGAGGVGTGSGIGGIGGSNGG 162

[Close]

BLAST of Clc05G04510 vs. NCBI nr
Match: XP_008439361.1 (PREDICTED: uncharacterized PE-PGRS family protein PE_PGRS46 [Cucumis melo])

HSP 1 Score: 87.0 bits (214), Expect = 2.5e-13
Identity = 74/91 (81.32%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 1   MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAG 60
           MLGG+AGIGKFGGIGGVAGIGSLG PGGLGGG        G GGASGIGGLAGHGLGGAG
Sbjct: 76  MLGGSAGIGKFGGIGGVAGIGSLGDPGGLGGGA-------GAGGASGIGGLAGHGLGGAG 135

Query: 61  GIGGLAGHGLGGAGGVGGGSGVGGDGGAGGG 92
           GIGGLAGHGLGGAGG+G GSG+GG GG+ GG
Sbjct: 136 GIGGLAGHGLGGAGGIGTGSGIGGIGGSNGG 159

[Close]

BLAST of Clc05G04510 vs. NCBI nr
Match: KAA0049179.1 (putative PE-PGRS family protein PE_PGRS46 [Cucumis melo var. makuwa] >TYK17381.1 putative PE-PGRS family protein PE_PGRS46 [Cucumis melo var. makuwa])

HSP 1 Score: 87.0 bits (214), Expect = 2.5e-13
Identity = 74/91 (81.32%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 1   MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAG 60
           MLGG+AGIGKFGGIGGVAGIGSLG PGGLGGG        G GGASGIGGLAGHGLGGAG
Sbjct: 76  MLGGSAGIGKFGGIGGVAGIGSLGDPGGLGGGA-------GAGGASGIGGLAGHGLGGAG 135

Query: 61  GIGGLAGHGLGGAGGVGGGSGVGGDGGAGGG 92
           GIGGLAGHGLGGAGG+G GSG+GG GG+ GG
Sbjct: 136 GIGGLAGHGLGGAGGIGTGSGIGGIGGSNGG 159

[Close]

BLAST of Clc05G04510 vs. NCBI nr
Match: XP_023540607.1 (glycine-rich cell wall structural protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 75.1 bits (183), Expect = 9.7e-10
Identity = 73/103 (70.87%), Postives = 82/103 (79.61%), Query Frame = 0


Query: 1   MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGG------GGASGIGGLAGH 60
           MLGG+AGIGKFGGIGG AGIG+ GG GG+GGGG GG GG+GG      GGA GIGGLAGH
Sbjct: 73  MLGGSAGIGKFGGIGGFAGIGNPGGLGGMGGGGGGGGGGIGGVAGHGLGGAGGIGGLAGH 132

Query: 61  GLGGAGGIGGLAGHGLGGAGGVGG--GSGVGGD---GGAGGGE 93
           GLGGAGGIGG+AGHGL G GG+GG  G G+GG    GG+GGG+
Sbjct: 133 GLGGAGGIGGIAGHGLDGGGGIGGIPGHGLGGADGVGGSGGGD 175

[Close]

BLAST of Clc05G04510 vs. ExPASy TrEMBL
Match: A0A0A0L460 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G133210 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.4e-14
Identity = 78/91 (85.71%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 1   MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAG 60
           MLGG+AGIGKFGGIGGVAGIGSLG PGGLGGGGAG     G GGASGIGGLAGHGLGGAG
Sbjct: 66  MLGGSAGIGKFGGIGGVAGIGSLGDPGGLGGGGAGP----GVGGASGIGGLAGHGLGGAG 125

Query: 61  GIGGLAGHGLGGAGGVGGGSGVGGDGGAGGG 92
           GIGGLAGHGLGGAGGVG GSG+GG GG+ GG
Sbjct: 126 GIGGLAGHGLGGAGGVGTGSGIGGIGGSNGG 152

[Close]

BLAST of Clc05G04510 vs. ExPASy TrEMBL
Match: A0A5D3CZJ9 (Putative PE-PGRS family protein PE_PGRS46 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002410 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-13
Identity = 74/91 (81.32%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 1   MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAG 60
           MLGG+AGIGKFGGIGGVAGIGSLG PGGLGGG        G GGASGIGGLAGHGLGGAG
Sbjct: 76  MLGGSAGIGKFGGIGGVAGIGSLGDPGGLGGGA-------GAGGASGIGGLAGHGLGGAG 135

Query: 61  GIGGLAGHGLGGAGGVGGGSGVGGDGGAGGG 92
           GIGGLAGHGLGGAGG+G GSG+GG GG+ GG
Sbjct: 136 GIGGLAGHGLGGAGGIGTGSGIGGIGGSNGG 159

[Close]

BLAST of Clc05G04510 vs. ExPASy TrEMBL
Match: A0A1S3AYL0 (uncharacterized PE-PGRS family protein PE_PGRS46 OS=Cucumis melo OX=3656 GN=LOC103484176 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-13
Identity = 74/91 (81.32%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 1   MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAG 60
           MLGG+AGIGKFGGIGGVAGIGSLG PGGLGGG        G GGASGIGGLAGHGLGGAG
Sbjct: 76  MLGGSAGIGKFGGIGGVAGIGSLGDPGGLGGGA-------GAGGASGIGGLAGHGLGGAG 135

Query: 61  GIGGLAGHGLGGAGGVGGGSGVGGDGGAGGG 92
           GIGGLAGHGLGGAGG+G GSG+GG GG+ GG
Sbjct: 136 GIGGLAGHGLGGAGGIGTGSGIGGIGGSNGG 159

[Close]

BLAST of Clc05G04510 vs. ExPASy TrEMBL
Match: A0A6J1IHK9 (glycine-rich cell wall structural protein OS=Cucurbita maxima OX=3661 GN=LOC111473638 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.0e-09
Identity = 72/98 (73.47%), Postives = 79/98 (80.61%), Query Frame = 0


Query: 1   MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGG------GGASGIGGLAGH 60
           MLGG+AGIGKFGGIGG AGIG  GG GG+GGGG GG GG+GG      GGA GIGGLAGH
Sbjct: 73  MLGGSAGIGKFGGIGGFAGIGDPGGLGGMGGGG-GGGGGMGGVAGHGLGGAGGIGGLAGH 132

Query: 61  GLGGAGGIGGLAGHGLGGAGGVGG--GSGVGGDGGAGG 91
           GLGGAGGIGG+AGHG+GG GG+GG  G G+GG GG GG
Sbjct: 133 GLGGAGGIGGIAGHGVGGVGGIGGIPGHGLGGAGGVGG 169

[Close]

BLAST of Clc05G04510 vs. ExPASy TrEMBL
Match: A0A6J1G005 (glycine-rich cell wall structural protein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449466 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.0e-09
Identity = 70/97 (72.16%), Postives = 76/97 (78.35%), Query Frame = 0


Query: 1   MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGG------GGASGIGGLAGH 60
           MLGG+AGIGKFGGIGG AGIG  GG GG+GGGG GG GG+GG      GGA GIGG+ GH
Sbjct: 76  MLGGSAGIGKFGGIGGFAGIGDPGGLGGMGGGGGGGGGGIGGLAGHGLGGAGGIGGIVGH 135

Query: 61  GLGGAGGIGGLAGHGLGGAGGVGG-GSGVGGDGGAGG 91
           GLGG GGIGG+ GHGLGGAGGVGG G G  G+GG GG
Sbjct: 136 GLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGG 172

[Close]

BLAST of Clc05G04510 vs. TAIR 10
Match: AT1G04660.1 (glycine-rich protein )

HSP 1 Score: 45.1 bits (105), Expect = 1.0e-04
Identity = 67/117 (57.26%), Postives = 75/117 (64.10%), Query Frame = 0


Query: 1   MLGGAAGIGKFGGIGGVAGIG---SLGGPGGLG--GGGAGGAGGLGG--GGASGIGGLAG 60
           ++GG  GIGK+GGIGG AGIG   S+GG GGLG  GGG GG GG+GG  GG  G+GGL G
Sbjct: 88  LIGGLGGIGKYGGIGGAAGIGGFHSIGGVGGLGGVGGGVGGLGGVGGGVGGLGGVGGLGG 147

Query: 61  HGLGG----------AGGIGGL-----AGHGLGGAGGVGGGSGVGGDGGAGGGEFVV 96
            GLGG          AGGIGGL     AG GLGG GG+G   G+G  GG GGG  VV
Sbjct: 148 AGLGGVGGVGGGIGKAGGIGGLGGLGGAGGGLGGVGGLGKAGGIGVGGGIGGGHGVV 204

[Close]

BLAST of Clc05G04510 vs. TAIR 10
Match: AT2G32690.1 (glycine-rich protein 23 )

HSP 1 Score: 45.1 bits (105), Expect = 1.0e-04
Identity = 58/96 (60.42%), Postives = 65/96 (67.71%), Query Frame = 0


Query: 2   LGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAGG 61
           LGG +G+G  GG+GG +G+G  GG GG GGGG GG GGLGGG   G GG AG GLGG GG
Sbjct: 99  LGGGSGLGGGGGLGGGSGLGGGGGLGGGGGGGLGGGGGLGGGAGGGYGGGAGGGLGGGGG 158

Query: 62  IGGLAGHGLGGAGGVGGGS------GVGGDGGAGGG 92
           IGG  G G GG GG GGG+      G+GG GG GGG
Sbjct: 159 IGGGGGFGGGGGGGFGGGAGGGFGKGIGGGGGLGGG 194

[Close]

BLAST of Clc05G04510 vs. TAIR 10
Match: AT2G32690.3 (glycine-rich protein 23 )

HSP 1 Score: 42.4 bits (98), Expect = 6.5e-04
Identity = 60/98 (61.22%), Postives = 65/98 (66.33%), Query Frame = 0


Query: 2   LGGAAGIGKFGGIGGVAGI---GSLGGPGGLGGG-GAGGAGGLGG----GGASGIGGLAG 61
           LGG  G+G  GG+GG  G+   G LGG GGLGGG G GG GGLGG    GG  G+GG  G
Sbjct: 69  LGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGSGLGGGGGLGGGSGLGGGGGLGGGGG 128

Query: 62  HGLGGAGGIGGLAGHGLGGAGGVGGGSGVGGDGGAGGG 92
            GLGG GG GG AG GLGG GG+GGG G GG GG G G
Sbjct: 129 GGLGGGGGYGGGAGGGLGGGGGIGGGGGFGGGGGGGFG 166

The following BLAST results are available for this feature:

BLAST of Clc05G04510 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650313.1	5.0e-14	85.71	hypothetical protein Csa_010764 [Cucumis sativus]	[more]
XP_011652752.1	5.0e-14	85.71	glycine-rich protein 23 [Cucumis sativus]	[more]
XP_008439361.1	2.5e-13	81.32	PREDICTED: uncharacterized PE-PGRS family protein PE_PGRS46 [Cucumis melo]	[more]
KAA0049179.1	2.5e-13	81.32	putative PE-PGRS family protein PE_PGRS46 [Cucumis melo var. makuwa] >TYK17381.1...	[more]
XP_023540607.1	9.7e-10	70.87	glycine-rich cell wall structural protein 1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc05G04510 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc05G04510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L460	2.4e-14	85.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G133210 PE=4 SV=1	[more]
A0A5D3CZJ9	1.2e-13	81.32	Putative PE-PGRS family protein PE_PGRS46 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3AYL0	1.2e-13	81.32	uncharacterized PE-PGRS family protein PE_PGRS46 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1IHK9	1.0e-09	73.47	glycine-rich cell wall structural protein OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1G005	1.0e-09	72.16	glycine-rich cell wall structural protein 1 isoform X2 OS=Cucurbita moschata OX=...	[more]

BLAST of Clc05G04510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04660.1	1.0e-04	57.26	glycine-rich protein	[more]
AT2G32690.1	1.0e-04	60.42	glycine-rich protein 23	[more]
AT2G32690.3	6.5e-04	61.22	glycine-rich protein 23	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G04510.1	Clc05G04510.1	mRNA