Clc05G04160 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCAAGCAAGGAGAGAGAGAATGTGAGATATTTAAAAGCATAAGCATATTGGATTGTAGTTGCGAAGAGCTACTCTGTTGTCAATGAAACCCATTATGGCATCTCCACTTTACACCAATTCCATTTTTCTTCTCTCTTTTGCTTTTCTCTTTCCCATTTCCTCCGCTCAACTTTAAACGAGCTTTCTTCTCTGTGATTCCATGGAAGTTTCACCTGGTGAGTACAATTTTCCATTTATTTTGTATTCGCGTCTTCTCTTTCGCCTACTCTTTTTGTTCTTCTTGCTACTCCATGCTTATTTAATATATCGCAGACGACGAAACGAATATTTTACTTTATTCTTTCATTTTGTAGTACTTCCGCATAAAATAATTTAATCTGTGAAATTTTCAATACGAGTTCCGTAGTTTGTTGTGCGTTTTGAAATTGAACTAATTTGCTCATCGTTTGCGTCGATTTTCTGTTAATCGTGCCGATTGACGGTGCAATCTAGGGATTCATTTTAATATTCAATAGCCATTTTGAATGATTGCTTTGAATTTACGTTATTAATCTTAGAATTTCGAAACCACGAACTGAAATTGTATACCAGGGCTGTTCACAATTGGAAGGGCAAACGTCTGAGAGTAAGAAAGATGTCAAGGGATTCATAACTAGAAATTTGGAAAGATGGCGATTTACAGGCGATGTAATTTTAACCAAAAGTTTTGTAGTCTGAGGCTTTGGGAATGGATGGATTGCTGGAAATTGGGTTTTCTTGTTAGAATTTATTGATGTAATCCTACTACTCACTAGTTGGAAGAAACTTTGAAGCACTTACGTAGTACATTTCCATGTTTCAAATGGATAGGAAGTAAATGATAGTCGTAGGAAAGGACATTACTTCATAAATGCTTGCATACATTTCTTTTCCATTTTCATAGACAAGCAACAACAAAAACGTTGCAACTTTTATGATGCTTGGTTCCTTGTTTATTAATTACTAATCAACCCAAAAACTTGAAAATTTGTAGAGCATCCAACAAAAGGCCATCTATATTAATTGAGGAGGAAATGACACTATAAAAGTTCAAACACAAAACTTCTGCTCTGATATTATATTAAATCACTAATCAACTTTAAAACTTAAGTCGATAGGTTATGTTAAATTTAATTATATCAATACTTTAACAATCCCTAAATGCATATTTTCCATTCTCAAGTCCTTTTTTGGCTGCTTGACAACTTCTGGAGTTGCTATTTGGCTCCTAGGATACACTGATATTGTTTTCATTTGACTTGTCAGGCACACATTGATTTTCTCAATCTTTTATTCTAAAGGAATATCTCATTCTTGCCCTCATGTCCAAAGTTGGAAGCATATTTTTCTGCTGCAGTTCATCAAATAAATATAACAGATTGGATGCAAAGCTGGGAAGAAAAATGGTTGAAGTCAAAAGAAATTTAGCTGGACATGACAATTTCAAGTCATTAAATGGCATAATTTTGAGATTTCCTCAATTCAAGGAGATATTACAAAACATCAGGGGTGTATTTGAACAGTATGGTGAGCTTTATTTCAGCTGTATCACTCTTTCTGAGATTCTCTTGCTCAAAGATTTTCTCACATTCCCTCGCTATCTCTCTCGCAGATGAAGATTCAAATGGAAGCATCGATCGTGAAGAACTCAAGAAATGCTTACAACAGCTACAAATGCATATGACTGAGGACGAAGTTGAGGATCTTTTCCACTCTTGTGACATTGATGGAAGTGCCGGAATACAATTCAACGAGTTTATCGTTCTCCTATGTCTCATTTATCTTCTCAAAGATGAACATTCACCCACTGTATGTACACACAAACTATTATCCTCCCCACACCCACATTTCTTTATGTTTTCAATCTGTTGGCCATAACCATCCTGGAGGTTTGTTACAGAAATCAAAGCTGGGCTCACCTCAACTTGAAGCAACTTTTGACACAATCATCCAAGCTTTCATATTTCTAGATAAAAATGGCGACGGCAAGCTCAACCGGAAAGAAATGGTCAAGGCTTTGAATGAGGCTTCTCCATACGAGAGATCCCCTGCACGCATTACAAAAACTAGATTCAGTATTTCTCCCTTCATTAAAGATACTCCATATTCGTGTTTTTGTTTTTACAAATCGTTCCTGAAAGTTAAAACTATCTGTCAAACAATGCGTTGAATACATTACTCATTCGAGCTAAGTAGTAGATTGCTAGATTGACACATTAAACTTCCGTCTACTTAAACCGTTTTGCTTTCAACTTTGGTTCATATTGGTCTTCTACTTTTAATATTTATTCATTTTGGTCCCGATATTTTTAAAAAATAACAATTTTGGTCCCTTTAAATGGTCATTTCTTAAAAGTACAAAGATTAAAATTGACGTTTTGAAAGTACCTAGATCAAAATGATCAAAGTTGAATGTATAGAAACAAAAATCACATGTAACAGGGTTTGAAGTAGTATTTGAACTTTGGTTTTATATTGATTTCCAACTTTTTCTTGATGAATGCAGAAGAAATGGACTGGAACAACAGTGGGAAGGTGAATTTCAGGGAGTTTCTATTTGGTTTCATTAACTGGGTTGGAATTGACACGGATGATGACCTCTCTCTTAAATGAAGTTGAAACAGAAAAGAAGACTTCAAGACAGACATCGTATAGACATGAAGACAAATGGCTTAAAAAATAAGGTCAGATTGATACAATGTTCAAAACTGAATGACTTGCCTAGTGATTATATTGGCATACTAATTACTATTGTTTGTTTATTTCGTTTGGTGAATTGTAATATTCAGACGAGCTTGTGAATTAGATTACATAATGGTATTCTTATTGTCGTTATGGTACGACGTTGAAATGAGTATAACTTAATTGGTCAAGACAATTGTATGGGCCACCTAAGAAAA TTTCAAGCAAGGAGAGAGAGAATGTGAGATATTTAAAAGCATAAGCATATTGGATTGTAGTTGCGAAGAGCTACTCTGTTGTCAATGAAACCCATTATGGCATCTCCACTTTACACCAATTCCATTTTTCTTCTCTCTTTTGCTTTTCTCTTTCCCATTTCCTCCGCTCAACTTTAAACGAGCTTTCTTCTCTGTGATTCCATGGAAGTTTCACCTGGCACACATTGATTTTCTCAATCTTTTATTCTAAAGGAATATCTCATTCTTGCCCTCATGTCCAAAGTTGGAAGCATATTTTTCTGCTGCAGTTCATCAAATAAATATAACAGATTGGATGCAAAGCTGGGAAGAAAAATGGTTGAAGTCAAAAGAAATTTAGCTGGACATGACAATTTCAAGTCATTAAATGGCATAATTTTGAGATTTCCTCAATTCAAGGAGATATTACAAAACATCAGGGGTGTATTTGAACAGTATGATGAAGATTCAAATGGAAGCATCGATCGTGAAGAACTCAAGAAATGCTTACAACAGCTACAAATGCATATGACTGAGGACGAAGTTGAGGATCTTTTCCACTCTTGTGACATTGATGGAAGTGCCGGAATACAATTCAACGAGTTTATCGTTCTCCTATGTCTCATTTATCTTCTCAAAGATGAACATTCACCCACTAAATCAAAGCTGGGCTCACCTCAACTTGAAGCAACTTTTGACACAATCATCCAAGCTTTCATATTTCTAGATAAAAATGGCGACGGCAAGCTCAACCGGAAAGAAATGGTCAAGGCTTTGAATGAGGCTTCTCCATACGAGAGATCCCCTGCACGCATTACAAAAACTAGATTCAAAGAAATGGACTGGAACAACAGTGGGAAGGTGAATTTCAGGGAGTTTCTATTTGGTTTCATTAACTGGGTTGGAATTGACACGGATGATGACCTCTCTCTTAAATGAAGTTGAAACAGAAAAGAAGACTTCAAGACAGACATCGTATAGACATGAAGACAAATGGCTTAAAAAATAAGGTCAGATTGATACAATGTTCAAAACTGAATGACTTGCCTAGTGATTATATTGGCATACTAATTACTATTGTTTGTTTATTTCGTTTGGTGAATTGTAATATTCAGACGAGCTTGTGAATTAGATTACATAATGGTATTCTTATTGTCGTTATGGTACGACGTTGAAATGAGTATAACTTAATTGGTCAAGACAATTGTATGGGCCACCTAAGAAAA ATGTCCAAAGTTGGAAGCATATTTTTCTGCTGCAGTTCATCAAATAAATATAACAGATTGGATGCAAAGCTGGGAAGAAAAATGGTTGAAGTCAAAAGAAATTTAGCTGGACATGACAATTTCAAGTCATTAAATGGCATAATTTTGAGATTTCCTCAATTCAAGGAGATATTACAAAACATCAGGGGTGTATTTGAACAGTATGATGAAGATTCAAATGGAAGCATCGATCGTGAAGAACTCAAGAAATGCTTACAACAGCTACAAATGCATATGACTGAGGACGAAGTTGAGGATCTTTTCCACTCTTGTGACATTGATGGAAGTGCCGGAATACAATTCAACGAGTTTATCGTTCTCCTATGTCTCATTTATCTTCTCAAAGATGAACATTCACCCACTAAATCAAAGCTGGGCTCACCTCAACTTGAAGCAACTTTTGACACAATCATCCAAGCTTTCATATTTCTAGATAAAAATGGCGACGGCAAGCTCAACCGGAAAGAAATGGTCAAGGCTTTGAATGAGGCTTCTCCATACGAGAGATCCCCTGCACGCATTACAAAAACTAGATTCAAAGAAATGGACTGGAACAACAGTGGGAAGGTGAATTTCAGGGAGTTTCTATTTGGTTTCATTAACTGGGTTGGAATTGACACGGATGATGACCTCTCTCTTAAATGA MSKVGSIFFCCSSSNKYNRLDAKLGRKMVEVKRNLAGHDNFKSLNGIILRFPQFKEILQNIRGVFEQYDEDSNGSIDREELKKCLQQLQMHMTEDEVEDLFHSCDIDGSAGIQFNEFIVLLCLIYLLKDEHSPTKSKLGSPQLEATFDTIIQAFIFLDKNGDGKLNRKEMVKALNEASPYERSPARITKTRFKEMDWNNSGKVNFREFLFGFINWVGIDTDDDLSLK Homology
BLAST of Clc05G04160 vs. NCBI nr
Match: XP_038892189.1 (probable calcium-binding protein CML22 isoform X2 [Benincasa hispida] >XP_038892198.1 probable calcium-binding protein CML22 isoform X2 [Benincasa hispida]) HSP 1 Score: 458.8 bits (1179), Expect = 2.8e-125 Identity = 223/227 (98.24%), Postives = 227/227 (100.00%), Query Frame = 0
BLAST of Clc05G04160 vs. NCBI nr
Match: XP_038892181.1 (probable calcium-binding protein CML22 isoform X1 [Benincasa hispida]) HSP 1 Score: 454.9 bits (1169), Expect = 4.0e-124 Identity = 221/227 (97.36%), Postives = 226/227 (99.56%), Query Frame = 0
BLAST of Clc05G04160 vs. NCBI nr
Match: XP_011650876.1 (probable calcium-binding protein CML22 [Cucumis sativus] >XP_031737636.1 probable calcium-binding protein CML22 [Cucumis sativus] >KGN56734.1 hypothetical protein Csa_010293 [Cucumis sativus]) HSP 1 Score: 449.5 bits (1155), Expect = 1.7e-122 Identity = 220/225 (97.78%), Postives = 222/225 (98.67%), Query Frame = 0
BLAST of Clc05G04160 vs. NCBI nr
Match: XP_008438356.1 (PREDICTED: probable calcium-binding protein CML22 [Cucumis melo] >XP_008438357.1 PREDICTED: probable calcium-binding protein CML22 [Cucumis melo]) HSP 1 Score: 448.0 bits (1151), Expect = 4.9e-122 Identity = 219/225 (97.33%), Postives = 222/225 (98.67%), Query Frame = 0
BLAST of Clc05G04160 vs. NCBI nr
Match: XP_022924247.1 (probable calcium-binding protein CML22 isoform X1 [Cucurbita moschata] >XP_022924248.1 probable calcium-binding protein CML22 isoform X1 [Cucurbita moschata] >XP_022924249.1 probable calcium-binding protein CML22 isoform X1 [Cucurbita moschata] >XP_022924250.1 probable calcium-binding protein CML22 isoform X1 [Cucurbita moschata] >XP_023526231.1 probable calcium-binding protein CML22 [Cucurbita pepo subsp. pepo] >XP_023526232.1 probable calcium-binding protein CML22 [Cucurbita pepo subsp. pepo] >XP_023526233.1 probable calcium-binding protein CML22 [Cucurbita pepo subsp. pepo] >XP_023526234.1 probable calcium-binding protein CML22 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 443.4 bits (1139), Expect = 1.2e-120 Identity = 213/227 (93.83%), Postives = 223/227 (98.24%), Query Frame = 0
BLAST of Clc05G04160 vs. ExPASy Swiss-Prot
Match: Q9LRN6 (Probable calcium-binding protein CML22 OS=Arabidopsis thaliana OX=3702 GN=CML22 PE=3 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 9.9e-65 Identity = 120/221 (54.30%), Postives = 161/221 (72.85%), Query Frame = 0
BLAST of Clc05G04160 vs. ExPASy Swiss-Prot
Match: Q52K82 (Probable calcium-binding protein CML21 OS=Arabidopsis thaliana OX=3702 GN=CML21 PE=2 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 5.4e-55 Identity = 101/206 (49.03%), Postives = 149/206 (72.33%), Query Frame = 0
BLAST of Clc05G04160 vs. ExPASy Swiss-Prot
Match: Q9ZSA3 (Calcium-dependent protein kinase 22 OS=Arabidopsis thaliana OX=3702 GN=CPK22 PE=3 SV=2) HSP 1 Score: 72.0 bits (175), Expect = 9.7e-12 Identity = 47/155 (30.32%), Postives = 78/155 (50.32%), Query Frame = 0
BLAST of Clc05G04160 vs. ExPASy Swiss-Prot
Match: P41210 (Caltractin OS=Atriplex nummularia OX=3553 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.1e-10 Identity = 43/151 (28.48%), Postives = 74/151 (49.01%), Query Frame = 0
BLAST of Clc05G04160 vs. ExPASy Swiss-Prot
Match: P02589 (Troponin C, skeletal muscle OS=Pelophylax lessonae OX=45623 PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.4e-10 Identity = 43/155 (27.74%), Postives = 77/155 (49.68%), Query Frame = 0
BLAST of Clc05G04160 vs. ExPASy TrEMBL
Match: A0A0A0L6R7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G130890 PE=4 SV=1) HSP 1 Score: 449.5 bits (1155), Expect = 8.2e-123 Identity = 220/225 (97.78%), Postives = 222/225 (98.67%), Query Frame = 0
BLAST of Clc05G04160 vs. ExPASy TrEMBL
Match: A0A1S3AVV2 (probable calcium-binding protein CML22 OS=Cucumis melo OX=3656 GN=LOC103483480 PE=4 SV=1) HSP 1 Score: 448.0 bits (1151), Expect = 2.4e-122 Identity = 219/225 (97.33%), Postives = 222/225 (98.67%), Query Frame = 0
BLAST of Clc05G04160 vs. ExPASy TrEMBL
Match: A0A6J1EBV7 (probable calcium-binding protein CML22 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431775 PE=4 SV=1) HSP 1 Score: 443.4 bits (1139), Expect = 5.9e-121 Identity = 213/227 (93.83%), Postives = 223/227 (98.24%), Query Frame = 0
BLAST of Clc05G04160 vs. ExPASy TrEMBL
Match: A0A6J1ITH1 (probable calcium-binding protein CML22 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479770 PE=4 SV=1) HSP 1 Score: 441.4 bits (1134), Expect = 2.2e-120 Identity = 213/226 (94.25%), Postives = 221/226 (97.79%), Query Frame = 0
BLAST of Clc05G04160 vs. ExPASy TrEMBL
Match: A0A6J1D045 (probable calcium-binding protein CML22 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016137 PE=4 SV=1) HSP 1 Score: 421.8 bits (1083), Expect = 1.8e-114 Identity = 206/226 (91.15%), Postives = 214/226 (94.69%), Query Frame = 0
BLAST of Clc05G04160 vs. TAIR 10
Match: AT3G24110.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 248.1 bits (632), Expect = 7.0e-66 Identity = 120/221 (54.30%), Postives = 161/221 (72.85%), Query Frame = 0
BLAST of Clc05G04160 vs. TAIR 10
Match: AT4G26470.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 215.7 bits (548), Expect = 3.8e-56 Identity = 101/206 (49.03%), Postives = 149/206 (72.33%), Query Frame = 0
BLAST of Clc05G04160 vs. TAIR 10
Match: AT4G26470.2 (Calcium-binding EF-hand family protein ) HSP 1 Score: 171.4 bits (433), Expect = 8.3e-43 Identity = 83/175 (47.43%), Postives = 124/175 (70.86%), Query Frame = 0
BLAST of Clc05G04160 vs. TAIR 10
Match: AT4G04710.1 (calcium-dependent protein kinase 22 ) HSP 1 Score: 68.2 bits (165), Expect = 9.9e-12 Identity = 48/157 (30.57%), Postives = 78/157 (49.68%), Query Frame = 0
BLAST of Clc05G04160 vs. TAIR 10
Match: AT2G41100.1 (Calcium-binding EF hand family protein ) HSP 1 Score: 62.8 bits (151), Expect = 4.2e-10 Identity = 40/151 (26.49%), Postives = 72/151 (47.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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