Clc05G03390 (gene) Watermelon (cordophanus) v2

Overview
NameClc05G03390
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationClcChr05: 2334444 .. 2338775 (+)
RNA-Seq ExpressionClc05G03390
SyntenyClc05G03390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTTCACGCCGATATCAAAAGCCGGAGATACCTCGTCGGCTGATGGAAGCAGAGCTTCGTTTCAGAAACTGCCTTCCGACAATGTAGAGCGCGCGCAAAACCTATTGCCGCGCAGTTCACCTAATAACGAAGTAACAATAAGACGAAGCATTTTAAGTGAGATTATGATCAAATTTCGTTTCAGTATTCAACTTTCCATATTTCTTTTTGGCCACCAAAATTTTAAAATATTCAAATTTGTCACCAAACTTCTTTAACCGTCAATAATCCTTATTCTAGTCATTAAATTTTAAAAAATAACCCTACCAAAATAGTGAAATTTTGTTTTGGAAAAAAACAATTAGATTTTAAAATTTAGGCATGTTGGATGACAATTTGATTTTTAGGCTTATAAACACTTCTTTCATCACTAAATTTCTTACTTTCTCATCTATTTTTTATCAATATTTTAAAAAATTAAGCAAATTTTTTTAAAAAATGAGAGAAGTAAAAACTTGTGTGAGAAATTTAACTATATAAATTTAACCAGAAAAAAAATTAGAAACTATTTGGGCGGCTGTAATGTAATTAAGATTACTTGAATCAAGGAAGTAAAATAAAAAAAAAAAAAACAACAGAACTAAAAAGAAAAGGGCAATACTAGGATGCATCCATCTCTATGCATCCCACTATCATCACTCACCCCATTTTAACTACAAAAAATAAATAAGAAGAATTTATCACGTATCGTGATTGAACAATTTAGTGAGATGTTAAAAAAAGGTGCATCTTGGCGGTGCCCTCGTGGGCACGTTCCTCTCAGGGTCGGTCTGGTCTAACCATTTTTCAAACAAAAATTGAGAAATCATTTCATGCCTAAGAGGCAAGGGCAAAGAGGTAATTTCGTAAAAACTTATCGAGAAACTAAGTACAGAGCTCGCGCGCAGTCGCATCGGACTCGCAGCTCATTCTGTTCTCCCCAGAAATCCCTCGGCCCAGCGACGACGACGATGCTTCTCCAAACTTCCGTTCACCACCGTACCGTCTCTCTCTCCTCATCAACTTCTTATTCTCGTAAACTGCCGCCTCTAATCCAATCTCAGGCCTTTCGCCAGAATGTGAATTATCGGAGGCTTCCTCTCTCTGTAACTTGCTCTATCTCCCAAGTCCATAGCTATGGAACCGTGGACTTCGAGAGGAGGCCCATGGTCAAATGGAACGCTATTTACAGGAGGATATCGCTGATGGAGAATCCTGAGTTGGGCTCTGCGAGTGTGCTGAACCAGTGGGAGAATGAGGGCAAGAAGCTAACGAAATGGGAGCTTTCTCGGGTCGTTAAGGAGTTAAGGAAGTACAAACGGTTTGAAAGGGCTTTGGAGGTAAAGTAGATGATAATTTTTAGGCAATCTTTGGATGCATATGTTGGAGTTTATGGATTGGTTCTATTGGGTTGTGAATTGTGATATTTAATTTCAGTCTTTAGTTGAGGTAATGAGGAAAGAATCTGATGTCAATTTCGATATAGGATTAACTGATGTTCAGCAACATTGATAAGGTAGATGCTTTATGCTTCTTGGCTTGTATTTATATATATATTCAAAATTACTTTGAAACATTTACTTTTAATTAATCAAAATCAATTTCGATAGAATGAAAATTATGTTTAGGAAATCAAACATTGAAATAATTATGAATGATTAGAGACATGTTTATATGTGTTTCTGAATATGAAAAGAAAGTGATTCTTACCGTTTCAAACTTACTTCCAAACATACTCTTAACAAGTTCTTGTGGCGAGTATGAAAGCCGTTCGAGGTTTGAATCTCTTTTCACTTCGTAGATTGGATTGGATCAGTCGATTCTTTCCATCGAAGTTGATTGTAGTCAAGATTATTTGTGCAAGTGTCAAATTTACACAACCAGTGATAACCAGTTAATTTTTGGGTTCTTGTCTGAAATCACCGCTTATGAAAGCCATTTGAGGTTTGAATCTCTTTTTAACTTCATAGATTGGATTGGATCGGTTGATTCTTTCCATCGAAGTTGATTGTGGTCAGGATTATTTGTGCAGTGTGGAGTTTACACAACCAGTGATGACCATCTAATTTTTGATCTCTTGTTTGAAATCCTCACTTTTACATGAAGTAATATTGATTTGTCTTCTGATAAATGAAAATATAAGTTCTTTGCCTGCTTATTTGGTTACTTTATGGTAGAAAACAAAAGGCATTTATTAATTTCTTGGGTTGGCTAGTAAAACTAAAGTTTTTTCTTCTTCGTCATAGGACATTCTAACTTGGTATGAGTTCAAATATAAACTGTGCCGATGCTTTAGCGTTCGTTTATTGGGAGGCAATGTTTTATTTCATTGAAGAATGTTAGATGCCATCTTTTGAACATTTCCCTCTAACTCTTTGGGTCTCCTATCTTCCTAATACATTATGATTGAGAAATTATCTGTTTTGATCATTTAGCTGATCTCGATGCTTATTACTACTGTCTGTTGAGGCGAGTTTATATATTTGAAATGCGTCTGATCATGTGAATCTGGTTATACAATACTTTTCTAAACTTCAAAAGGATAATGTGCAGTTATTCTGAATTTGGCAATTTGTTGCATCATTGCATGCAGTGCATAAATGATATACCTATATAGATTGTTAAAGCTGTTTTGATTCTAAAATTCCATTTTTTTGTAGATATATGATTGGATGAGCAATAGAGAAGAGAGGTTTAGATTAACAACTAGTGATGCTGCGATTCAATTGGATCTTATTTCAAAAGTCCGTGGTATTACAAGTGCTGAAGACTACTTCCTTAGGCTGCCAGATAATTTGAAAGACAGGAGGATATACGGGGCTCTTCTGAATGCATATGTGAAATCAAGACTGAGAGAAAAAGCAGAAAATTTACTTGCAAAAATGAGAACCAAAGGCTACGCGACTCACCCGCTTCCGTTCAATGTAATGATGACTCTCTACATGAACCTTAAAGAGTATGAGAAAGTTGAGTCATTAGTGGCAGAAATGACAGAAAAGAGCATTCAGCTTGACATATACTCTTACAACATTTGGCTATCATCTTGTGGGCTACAAGGATCTACTGAGAAGATGGAAGAAGTATATGAGCAGATGAAACAAGACAGGACCATCAATGCCAATTGGACTACATTTAGCACAATGGCAACAATGTACATTAAGATGGGACTAATAGAAAAGGCTGAAGAATGCTTGAGAAGGGTTGAAAGTAGAATTGTAGGCCGTGATCGAATACCTTATCATTATCTGATAAGTCTGTATGGTAGTGTTGGTAATAAAGAAGAAACATATCGGGTATGGAACACTTACAAAACCGTTTTCCCCACGATTCCAAATTTGGGATACCATGCTATAATTTCTGCTCTAATCAGGGTAGGTGACGTTGAAGGTGCTGAAAAAATTTATGAGGAATGGCTAACTGTTAAATCGACCTATGACCCACGCATCGCTAATCTTTTCATAGGGTGGTATATTAAGGAAGGGACTGTGAGTAAAGCTGAAAGCTTCTTTGATCACATGGTTGAAGTTGGGGGAAAGCCAAATTCAAGTACGTGGGAGACTCTTGCCGATGGGCATACTAAAGAGGGTCGGGTTTCCGATGCTTTATCTAGTTGGAAAGAAGCCTTTTCTGCTGAGGGTTCAAAGAGTTGGAGGCCAAAGCCCTATAATGTGTTGGCTTACTTCGACCTCTGTGAGAAAGAAGGAGACATTGCCAGTAAGGAGGTTCTAGTTGGACTGTTGAGGCAGTCCAAATATCTTCAAGACAAATCATATGCATCACTCATCGGTTTGTCAGACAAGACAATCGACAACGATGTAGTTTCGGAAAAAGGTAGTAATATAGACGATGAAATCGATAAACCCGAGTTCGAATCTGATGATTCTGAGATGCTTCTCAAGTTGTGACAGATTCAATGATATTGTCATCCATGGTTTCTGGGATTCATAATCCGAAGTTTGGCAAATATGTTTCATCTGTGTTGTCCCAAACCCGGAGGGTTGAGAATGCTCATCAGTGGTTCACTCTTCAAGTGTAGAGGGTGAAAGCAAATTTAAAATTTTGCTTTGGGGTCTGGGAGTTGGGTAAAATCCAAAGTTATACTCAGCAGAGGTATTTTATTTATGTTACACTTGTCAGCCATCTCTATCTCTTCTCCAGAATTAGATCTTTCTATGAATTTTGAATGTAATTTTCCCAGGTAGAAGTCTTGGATATACTAAACAGGGTGGAAAGTTTGGTGCAATTCCTTCATTGATTAACAATTTCTTAAGCATGATTTAATAAAGGGAAGAGGCATCAAAGTTTCCTAA

mRNA sequence

ATGAACTTCACGCCGATATCAAAAGCCGGAGATACCTCGTCGGCTGATGGAAGCAGAGCTTCGTTTCAGAAACTGCCTTCCGACAATGTAGAGCGCGCGCAAAACCTATTGCCGCGCAGTTCACCTAATAACGAATCGCATCGGACTCGCAGCTCATTCTGTTCTCCCCAGAAATCCCTCGGCCCAGCGACGACGACGATGCTTCTCCAAACTTCCGTTCACCACCGTACCGTCTCTCTCTCCTCATCAACTTCTTATTCTCGTAAACTGCCGCCTCTAATCCAATCTCAGGCCTTTCGCCAGAATGTGAATTATCGGAGGCTTCCTCTCTCTGTAACTTGCTCTATCTCCCAAGTCCATAGCTATGGAACCGTGGACTTCGAGAGGAGGCCCATGGTCAAATGGAACGCTATTTACAGGAGGATATCGCTGATGGAGAATCCTGAGTTGGGCTCTGCGAGTGTGCTGAACCAGTGGGAGAATGAGGGCAAGAAGCTAACGAAATGGGAGCTTTCTCGGGTCGTTAAGGAGTTAAGGAAGTACAAACGGTTTGAAAGGGCTTTGGAGATATATGATTGGATGAGCAATAGAGAAGAGAGGTTTAGATTAACAACTAGTGATGCTGCGATTCAATTGGATCTTATTTCAAAAGTCCGTGGTATTACAAGTGCTGAAGACTACTTCCTTAGGCTGCCAGATAATTTGAAAGACAGGAGGATATACGGGGCTCTTCTGAATGCATATGTGAAATCAAGACTGAGAGAAAAAGCAGAAAATTTACTTGCAAAAATGAGAACCAAAGGCTACGCGACTCACCCGCTTCCGTTCAATGTAATGATGACTCTCTACATGAACCTTAAAGAGTATGAGAAAGTTGAGTCATTAGTGGCAGAAATGACAGAAAAGAGCATTCAGCTTGACATATACTCTTACAACATTTGGCTATCATCTTGTGGGCTACAAGGATCTACTGAGAAGATGGAAGAAGTATATGAGCAGATGAAACAAGACAGGACCATCAATGCCAATTGGACTACATTTAGCACAATGGCAACAATGTACATTAAGATGGGACTAATAGAAAAGGCTGAAGAATGCTTGAGAAGGGTTGAAAGTAGAATTGTAGGCCGTGATCGAATACCTTATCATTATCTGATAAGTCTGTATGGTAGTGTTGGTAATAAAGAAGAAACATATCGGGTATGGAACACTTACAAAACCGTTTTCCCCACGATTCCAAATTTGGGATACCATGCTATAATTTCTGCTCTAATCAGGGTAGGTGACGTTGAAGGTGCTGAAAAAATTTATGAGGAATGGCTAACTGTTAAATCGACCTATGACCCACGCATCGCTAATCTTTTCATAGGGTGGTATATTAAGGAAGGGACTGTGAGTAAAGCTGAAAGCTTCTTTGATCACATGGTTGAAGTTGGGGGAAAGCCAAATTCAAGTACGTGGGAGACTCTTGCCGATGGGCATACTAAAGAGGGTCGGGTTTCCGATGCTTTATCTAGTTGGAAAGAAGCCTTTTCTGCTGAGGGTTCAAAGAGTTGGAGGCCAAAGCCCTATAATGTGTTGGCTTACTTCGACCTCTGTGAGAAAGAAGGAGACATTGCCAGTAAGGAGGTTCTAGTTGGACTGTTGAGGCAGTCCAAATATCTTCAAGACAAATCATATGCATCACTCATCGGTTTGTCAGACAAGACAATCGACAACGATGTAGTTTCGGAAAAAGGTAGTAATATAGACGATGAAATCGATAAACCCGAGTTCGAATCTGATGATTCTGAGATGCTTCTCAAGTTGTGACAGATTCAATGATATTGTCATCCATGGTTTCTGGGATTCATAATCCGAAGTTTGGCAAATATGTTTCATCTGTGTTGTCCCAAACCCGGAGGGTTGAGAATGCTCATCAGTGGTTCACTCTTCAAGTGTAGAGGGTGAAAGCAAATTTAAAATTTTGCTTTGGGGTCTGGGAGTTGGGTAAAATCCAAAGTTATACTCAGCAGAGGTATTTTATTTATGTTACACTTGTCAGCCATCTCTATCTCTTCTCCAGAATTAGATCTTTCTATGAATTTTGAATGTAATTTTCCCAGGTAGAAGTCTTGGATATACTAAACAGGGTGGAAAGTTTGGTGCAATTCCTTCATTGATTAACAATTTCTTAAGCATGATTTAATAAAGGGAAGAGGCATCAAAGTTTCCTAA

Coding sequence (CDS)

ATGAACTTCACGCCGATATCAAAAGCCGGAGATACCTCGTCGGCTGATGGAAGCAGAGCTTCGTTTCAGAAACTGCCTTCCGACAATGTAGAGCGCGCGCAAAACCTATTGCCGCGCAGTTCACCTAATAACGAATCGCATCGGACTCGCAGCTCATTCTGTTCTCCCCAGAAATCCCTCGGCCCAGCGACGACGACGATGCTTCTCCAAACTTCCGTTCACCACCGTACCGTCTCTCTCTCCTCATCAACTTCTTATTCTCGTAAACTGCCGCCTCTAATCCAATCTCAGGCCTTTCGCCAGAATGTGAATTATCGGAGGCTTCCTCTCTCTGTAACTTGCTCTATCTCCCAAGTCCATAGCTATGGAACCGTGGACTTCGAGAGGAGGCCCATGGTCAAATGGAACGCTATTTACAGGAGGATATCGCTGATGGAGAATCCTGAGTTGGGCTCTGCGAGTGTGCTGAACCAGTGGGAGAATGAGGGCAAGAAGCTAACGAAATGGGAGCTTTCTCGGGTCGTTAAGGAGTTAAGGAAGTACAAACGGTTTGAAAGGGCTTTGGAGATATATGATTGGATGAGCAATAGAGAAGAGAGGTTTAGATTAACAACTAGTGATGCTGCGATTCAATTGGATCTTATTTCAAAAGTCCGTGGTATTACAAGTGCTGAAGACTACTTCCTTAGGCTGCCAGATAATTTGAAAGACAGGAGGATATACGGGGCTCTTCTGAATGCATATGTGAAATCAAGACTGAGAGAAAAAGCAGAAAATTTACTTGCAAAAATGAGAACCAAAGGCTACGCGACTCACCCGCTTCCGTTCAATGTAATGATGACTCTCTACATGAACCTTAAAGAGTATGAGAAAGTTGAGTCATTAGTGGCAGAAATGACAGAAAAGAGCATTCAGCTTGACATATACTCTTACAACATTTGGCTATCATCTTGTGGGCTACAAGGATCTACTGAGAAGATGGAAGAAGTATATGAGCAGATGAAACAAGACAGGACCATCAATGCCAATTGGACTACATTTAGCACAATGGCAACAATGTACATTAAGATGGGACTAATAGAAAAGGCTGAAGAATGCTTGAGAAGGGTTGAAAGTAGAATTGTAGGCCGTGATCGAATACCTTATCATTATCTGATAAGTCTGTATGGTAGTGTTGGTAATAAAGAAGAAACATATCGGGTATGGAACACTTACAAAACCGTTTTCCCCACGATTCCAAATTTGGGATACCATGCTATAATTTCTGCTCTAATCAGGGTAGGTGACGTTGAAGGTGCTGAAAAAATTTATGAGGAATGGCTAACTGTTAAATCGACCTATGACCCACGCATCGCTAATCTTTTCATAGGGTGGTATATTAAGGAAGGGACTGTGAGTAAAGCTGAAAGCTTCTTTGATCACATGGTTGAAGTTGGGGGAAAGCCAAATTCAAGTACGTGGGAGACTCTTGCCGATGGGCATACTAAAGAGGGTCGGGTTTCCGATGCTTTATCTAGTTGGAAAGAAGCCTTTTCTGCTGAGGGTTCAAAGAGTTGGAGGCCAAAGCCCTATAATGTGTTGGCTTACTTCGACCTCTGTGAGAAAGAAGGAGACATTGCCAGTAAGGAGGTTCTAGTTGGACTGTTGAGGCAGTCCAAATATCTTCAAGACAAATCATATGCATCACTCATCGGTTTGTCAGACAAGACAATCGACAACGATGTAGTTTCGGAAAAAGGTAGTAATATAGACGATGAAATCGATAAACCCGAGTTCGAATCTGATGATTCTGAGATGCTTCTCAAGTTGTGA

Protein sequence

MNFTPISKAGDTSSADGSRASFQKLPSDNVERAQNLLPRSSPNNESHRTRSSFCSPQKSLGPATTTMLLQTSVHHRTVSLSSSTSYSRKLPPLIQSQAFRQNVNYRRLPLSVTCSISQVHSYGTVDFERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRFERALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGALLNAYVKSRLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVAEMTEKSIQLDIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEECLRRVESRIVGRDRIPYHYLISLYGSVGNKEETYRVWNTYKTVFPTIPNLGYHAIISALIRVGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYIKEGTVSKAESFFDHMVEVGGKPNSSTWETLADGHTKEGRVSDALSSWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLVGLLRQSKYLQDKSYASLIGLSDKTIDNDVVSEKGSNIDDEIDKPEFESDDSEMLLKL
Homology
[Close]
BLAST of Clc05G03390 vs. NCBI nr
Match: XP_038903663.1 (pentatricopeptide repeat-containing protein At1g02150 [Benincasa hispida])

HSP 1 Score: 1035.0 bits (2675), Expect = 2.5e-298
Identity = 519/537 (96.65%), Postives = 526/537 (97.95%), Query Frame = 0 

Query: 67  MLLQTSVHHRTVSLSSSTSYSRKLPPLIQSQAFRQNVNYRRLPLSVTCSISQVHSYGTVD 126
           MLLQTSVHHRTVSLSSS SYSRKLPPLIQS+AFRQNVNYRRLPLSV CSISQVHSYGTVD
Sbjct: 1   MLLQTSVHHRTVSLSSSISYSRKLPPLIQSEAFRQNVNYRRLPLSVNCSISQVHSYGTVD 60

Query: 127 FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRFER 186
           FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRFE 
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRFEM 120

Query: 187 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGALLN 246
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGI SAEDYFLRLPDNLKDRRIYGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN 180

Query: 247 AYVKSRLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVAEMTEKSIQL 306
           AYVK+RLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLV+EMTEKSIQL
Sbjct: 181 AYVKARLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKSIQL 240

Query: 307 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 366
           DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 300

Query: 367 LRRVESRIVGRDRIPYHYLISLYGSVGNKEETYRVWNTYKTVFPTIPNLGYHAIISALIR 426
           LRRVESRIVGRDRIPYHYLISLYGSVGNKEETYRVW  YKTVFPTIPNLGYHAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPYHYLISLYGSVGNKEETYRVWTIYKTVFPTIPNLGYHAIISALIR 360

Query: 427 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYIKEGTVSKAESFFDHMVEVGGKPNSST 486
           VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWY+KEGTVSKAESFFDHMVEVGGKPNSST
Sbjct: 361 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGTVSKAESFFDHMVEVGGKPNSST 420

Query: 487 WETLADGHTKEGRVSDALSSWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 546
           WE LADGHTKEGRVSDAL+SWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV
Sbjct: 421 WEILADGHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480

Query: 547 GLLRQSKYLQDKSYASLIGLSDKTIDNDVVSEKGSNIDDEIDKPEFESDDSEMLLKL 604
           GLLRQSKYLQDKSY SLIGLSD+TIDNDVV EK SNID+EIDK EFESDDSEMLLKL
Sbjct: 481 GLLRQSKYLQDKSYVSLIGLSDETIDNDVVLEKDSNIDEEIDKTEFESDDSEMLLKL 537

[Close]
BLAST of Clc05G03390 vs. NCBI nr
Match: XP_008438222.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Cucumis melo] >KAA0049070.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK17492.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 992.6 bits (2565), Expect = 1.4e-285
Identity = 496/537 (92.36%), Postives = 512/537 (95.34%), Query Frame = 0 

Query: 67  MLLQTSVHHRTVSLSSSTSYSRKLPPLIQSQAFRQNVNYRRLPLSVTCSISQVHSYGTVD 126
           MLLQTSVHHRTVSL SS SYSRK  P IQSQ F  NVNYRRL LSVTCSISQVHSYGTVD
Sbjct: 1   MLLQTSVHHRTVSLPSSVSYSRKFLPPIQSQPFFHNVNYRRLRLSVTCSISQVHSYGTVD 60

Query: 127 FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRFER 186
           FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGK LTKWELSRVVKELRKYKRFER
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKNLTKWELSRVVKELRKYKRFER 120

Query: 187 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGALLN 246
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGI SAEDYFLRLPDNLKDRRIYGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN 180

Query: 247 AYVKSRLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVAEMTEKSIQL 306
           AY K+R REKAENLLAKMRTKGYATHPLPFNVMMTLYMN+KEYEKV+SLV+EMTEKSIQL
Sbjct: 181 AYAKARQREKAENLLAKMRTKGYATHPLPFNVMMTLYMNVKEYEKVDSLVSEMTEKSIQL 240

Query: 307 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 366
           DIYSYNIWLSSCGLQGST+KMEEVYEQMKQD+TINANWTTFSTMATMYIKMGLIEKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTDKMEEVYEQMKQDKTINANWTTFSTMATMYIKMGLIEKAEEC 300

Query: 367 LRRVESRIVGRDRIPYHYLISLYGSVGNKEETYRVWNTYKTVFPTIPNLGYHAIISALIR 426
           LR+VESRIVGRDRIPYHYLISLYGSVGNKEE YRVWN YK VFPTIPNLGYHAIISALIR
Sbjct: 301 LRKVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360

Query: 427 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYIKEGTVSKAESFFDHMVEVGGKPNSST 486
           VGDVEGAEKIYEEWLTVK+TYDPRIANLFIGWY+KE  +SKAE FFDHMVEVGGKPNSST
Sbjct: 361 VGDVEGAEKIYEEWLTVKATYDPRIANLFIGWYVKEANMSKAEGFFDHMVEVGGKPNSST 420

Query: 487 WETLADGHTKEGRVSDALSSWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 546
           WE LADGHTKEGRVSDAL+SWKEAFS+EGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV
Sbjct: 421 WEILADGHTKEGRVSDALASWKEAFSSEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480

Query: 547 GLLRQSKYLQDKSYASLIGLSDKTIDNDVVSEKGSNIDDEIDKPEFESDDSEMLLKL 604
           G LRQ KYLQDKSYASLIGL D+TIDND VSEKGS+I+DEIDK E+ESDDSEMLLKL
Sbjct: 481 GFLRQPKYLQDKSYASLIGLLDETIDNDEVSEKGSSINDEIDKTEYESDDSEMLLKL 537

[Close]
BLAST of Clc05G03390 vs. NCBI nr
Match: XP_022147061.1 (pentatricopeptide repeat-containing protein At1g02150 [Momordica charantia])

HSP 1 Score: 988.4 bits (2554), Expect = 2.7e-284
Identity = 491/537 (91.43%), Postives = 517/537 (96.28%), Query Frame = 0 

Query: 67  MLLQTSVHHRTVSLSSSTSYSRKLPPLIQSQAFRQNVNYRRLPLSVTCSISQVHSYGTVD 126
           MLLQTSVHHRTVSLSSS SYS KLP +I +QAFR+NVN+RRL L+VTCSIS VH+YGTVD
Sbjct: 1   MLLQTSVHHRTVSLSSSISYSGKLPCVIPAQAFRRNVNFRRLSLAVTCSISHVHNYGTVD 60

Query: 127 FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRFER 186
           FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKR+ER
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRYER 120

Query: 187 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGALLN 246
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGALLN 180

Query: 247 AYVKSRLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVAEMTEKSIQL 306
           AYV++RLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLV+EMTEK IQL
Sbjct: 181 AYVRARLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKGIQL 240

Query: 307 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 366
           DIYSYNIWLSSCGLQGSTE ME+VYE MKQDRTINANWTTFSTMATMYIKMGLIEKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTENMEKVYELMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 300

Query: 367 LRRVESRIVGRDRIPYHYLISLYGSVGNKEETYRVWNTYKTVFPTIPNLGYHAIISALIR 426
           LRRVESRIVGRDRIPYHYLISLYGS+GNK+ETYRVWN YKTVFPTIPNLGYHAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPYHYLISLYGSIGNKDETYRVWNIYKTVFPTIPNLGYHAIISALIR 360

Query: 427 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYIKEGTVSKAESFFDHMVEVGGKPNSST 486
           +GDVEGAEKIYEEWL+VK+TYDPRIANLFIGWY+KEG VSKAESFFDHMVEVGGKPNSST
Sbjct: 361 IGDVEGAEKIYEEWLSVKTTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSST 420

Query: 487 WETLADGHTKEGRVSDALSSWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 546
           WETLADGHTKEGRVSDA++SWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEG+I SKEVLV
Sbjct: 421 WETLADGHTKEGRVSDAVASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGEIGSKEVLV 480

Query: 547 GLLRQSKYLQDKSYASLIGLSDKTIDNDVVSEKGSNIDDEIDKPEFESDDSEMLLKL 604
            LLRQSKYLQDKSYASLIGLS+ T+D+ VVS  GS+IDDE D  E+ESDDSE+LLKL
Sbjct: 481 ELLRQSKYLQDKSYASLIGLSNDTVDSSVVSGNGSSIDDERDTTEYESDDSEILLKL 537

[Close]
BLAST of Clc05G03390 vs. NCBI nr
Match: XP_004133941.1 (pentatricopeptide repeat-containing protein At1g02150 [Cucumis sativus] >KGN56639.1 hypothetical protein Csa_010401 [Cucumis sativus])

HSP 1 Score: 984.6 bits (2544), Expect = 3.9e-283
Identity = 492/537 (91.62%), Postives = 507/537 (94.41%), Query Frame = 0 

Query: 67  MLLQTSVHHRTVSLSSSTSYSRKLPPLIQSQAFRQNVNYRRLPLSVTCSISQVHSYGTVD 126
           MLLQTSVHHRTVSL S  SYSRK  PLIQSQ F  NVNYRRLPLSVTCSISQVHSYGTVD
Sbjct: 1   MLLQTSVHHRTVSLPSPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSISQVHSYGTVD 60

Query: 127 FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRFER 186
           FERRPM KWNAIYRRISLMENPELGSASVLNQWENEGK +TKWELSRVVKELRKYKRFER
Sbjct: 61  FERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFER 120

Query: 187 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGALLN 246
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGI SAE+YFLRLP++LKDRRIYGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLN 180

Query: 247 AYVKSRLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVAEMTEKSIQL 306
           AY K R REKAENLL KMRTKG+ THPLPFNVMMTLYMN+KEYEKVESLV+EMTE SIQL
Sbjct: 181 AYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQL 240

Query: 307 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 366
           DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGL+EKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEEC 300

Query: 367 LRRVESRIVGRDRIPYHYLISLYGSVGNKEETYRVWNTYKTVFPTIPNLGYHAIISALIR 426
           LRRVESRIVGRDRIPYHYLISLYGSVGNKEE YRVWN YK VFPTIPNLGYHAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360

Query: 427 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYIKEGTVSKAESFFDHMVEVGGKPNSST 486
           VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWY+KEG  SKAESFFDHMVEVGGKPNSST
Sbjct: 361 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSST 420

Query: 487 WETLADGHTKEGRVSDALSSWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 546
           WE L D HTKEGRVSDAL+SWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV
Sbjct: 421 WEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480

Query: 547 GLLRQSKYLQDKSYASLIGLSDKTIDNDVVSEKGSNIDDEIDKPEFESDDSEMLLKL 604
           GLLRQ KYLQDK+YASLIGL D+TIDN+ VSEKGSNI+DEIDK E+ESDDSEM LKL
Sbjct: 481 GLLRQPKYLQDKTYASLIGLLDETIDNNEVSEKGSNINDEIDKTEYESDDSEMFLKL 537

[Close]
BLAST of Clc05G03390 vs. NCBI nr
Match: KAG6597223.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028695.1 Pentatricopeptide repeat-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 922.9 bits (2384), Expect = 1.4e-264
Identity = 456/537 (84.92%), Postives = 497/537 (92.55%), Query Frame = 0 

Query: 67  MLLQTSVHHRTVSLSSSTSYSRKLPPLIQSQAFRQNVNYRRLPLSVTCSISQVHSYGTVD 126
           MLLQTSVHH  VSLSSSTSYS KLPP+IQSQAF +NVNYRRLPLS+TCS+SQ HSYGTVD
Sbjct: 1   MLLQTSVHHCNVSLSSSTSYSHKLPPVIQSQAFFRNVNYRRLPLSITCSVSQTHSYGTVD 60

Query: 127 FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRFER 186
           FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKK+TKWE+ RV+KELRKY+R+ER
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRRYER 120

Query: 187 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGALLN 246
           ALEIYDWMSNR E F+LT SDAAIQLDLISKV GI SAEDYF+RLP NLKDRR YGALLN
Sbjct: 121 ALEIYDWMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRRTYGALLN 180

Query: 247 AYVKSRLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVAEMTEKSIQL 306
           AYVK+R REKAE+LLAKMRTKGYA H L FNVMMTLY+N KEYEKVESLV+EM EK I+L
Sbjct: 181 AYVKARQREKAESLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKGIRL 240

Query: 307 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 366
           DIYSYNIW+SS GLQGS EKMEEVYE+MKQDRTINANWTTFSTMATMYIK G+IEKAEEC
Sbjct: 241 DIYSYNIWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGMIEKAEEC 300

Query: 367 LRRVESRIVGRDRIPYHYLISLYGSVGNKEETYRVWNTYKTVFPTIPNLGYHAIISALIR 426
           LRRVESRIVGRDRIP+HYL+SLYGSVGNKEETYRVW  YKT+FPTIPNLGYHAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGYHAIISALIR 360

Query: 427 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYIKEGTVSKAESFFDHMVEVGGKPNSST 486
            GD+EGAEKIYEEWL+VK+ YDPRIANLF+GWY+KEG  SKAESFF+HMVE GGKPNSS+
Sbjct: 361 AGDIEGAEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPNSSS 420

Query: 487 WETLADGHTKEGRVSDALSSWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 546
           WE LADG +KEGRVSDAL+SWKEAFSAEGS++WRPK + VLA+F+LCEKEGDIASKEVLV
Sbjct: 421 WEILADGLSKEGRVSDALASWKEAFSAEGSRTWRPKHFKVLAFFNLCEKEGDIASKEVLV 480

Query: 547 GLLRQSKYLQDKSYASLIGLSDKTIDNDVVSEKGSNIDDEIDKPEFESDDSEMLLKL 604
           GLLRQSK LQDKSY SLIGLSD+TIDNDVVS +GSNIDDE DK  +ESDDSEMLL++
Sbjct: 481 GLLRQSKCLQDKSYVSLIGLSDETIDNDVVSGEGSNIDDESDKTVYESDDSEMLLEM 537

[Close]
BLAST of Clc05G03390 vs. ExPASy Swiss-Prot
Match: Q8LPS6 (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 679.9 bits (1753), Expect = 2.7e-194
Identity = 332/514 (64.59%), Postives = 414/514 (80.54%), Query Frame = 0 

Query: 67  MLLQTSVHHRTVSLSSSTSYSRKL---PPLIQSQAFRQNVNYRRLPLSVTCSISQVHSYG 126
           MLLQ +V +R V L+SS SYSR L    P++   A  +         ++ CSISQV+ YG
Sbjct: 1   MLLQAAVQNRNVPLASSASYSRLLRCRSPVVSVAALSKKT------AAIVCSISQVYGYG 60

Query: 127 TVDFERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKR 186
           TVD+ERRP+V+WNAIY++ISLME PELG+ASVLNQWE  G+KLTKWEL RVVKELRKYKR
Sbjct: 61  TVDYERRPIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKR 120

Query: 187 FERALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGA 246
             +ALE+YDWM+NR ERFRL+ SDAAIQLDLI KVRGI  AE++FL+LP+N KDRR+YG+
Sbjct: 121 ANQALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGS 180

Query: 247 LLNAYVKSRLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVAEMTEKS 306
           LLNAYV+++ REKAE LL  MR KGYA HPLPFNVMMTLYMNL+EY+KV+++V EM +K 
Sbjct: 181 LLNAYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKD 240

Query: 307 IQLDIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKA 366
           I+LDIYSYNIWLSSCG  GS EKME VY+QMK D +I  NWTTFSTMATMYIKMG  EKA
Sbjct: 241 IRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKA 300

Query: 367 EECLRRVESRIVGRDRIPYHYLISLYGSVGNKEETYRVWNTYKTVFPTIPNLGYHAIISA 426
           E+ LR+VE+RI GR+RIPYHYL+SLYGS+GNK+E YRVW+ YK+V P+IPNLGYHA++S+
Sbjct: 301 EDALRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSS 360

Query: 427 LIRVGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYIKEGTVSKAESFFDHMVEVGGKPN 486
           L+R+GD+EGAEK+YEEWL VKS+YDPRI NL +  Y+K   +  AE  FDHMVE+GGKP+
Sbjct: 361 LVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPS 420

Query: 487 SSTWETLADGHTKEGRVSDALSSWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKE 546
           SSTWE LA GHT++  +S+AL+  + AFSAEGS +WRPK   +  +F LCE+E D+ SKE
Sbjct: 421 SSTWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKE 480

Query: 547 VLVGLLRQSKYLQDKSYASLIGLSD-KTIDNDVV 577
            ++ LLRQS  L+DKSY +LI + + +T++N  +
Sbjct: 481 AVLELLRQSGDLEDKSYLALIDVDENRTVNNSEI 508

[Close]
BLAST of Clc05G03390 vs. ExPASy Swiss-Prot
Match: O22714 (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=1 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.5e-72
Identity = 149/416 (35.82%), Postives = 228/416 (54.81%), Query Frame = 0 

Query: 138 IYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRFERALEIYDWMSNR 197
           +Y R+      E+     LNQ+    K + KWE+   +K+LR    +  AL++ + M   
Sbjct: 25  LYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVM--E 84

Query: 198 EERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGALLNAYVKSRLREKA 257
           E     T SD AI LDL++K R IT+ E+YF+ LP+  K    YG+LLN Y K  L EKA
Sbjct: 85  ERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKA 144

Query: 258 ENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVAEMTEKSIQLDIYSYNIWLSS 317
           E LL KM+        + +N +MTLY    E EKV +++ E+  +++  D Y+YN+W+ +
Sbjct: 145 EGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRA 204

Query: 318 CGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEECLRRVESRIVGR 377
                    +E V E+M +D  +  +WTT+S MA++Y+  GL +KAE+ L+ +E +   R
Sbjct: 205 LAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQR 264

Query: 378 DRIPYHYLISLYGSVGNKEETYRVWNTYKTVFPTIPNLGYHAIISALIRVGDVEGAEKIY 437
           D   Y +LI+LYG +G   E YR+W + +   P   N+ Y  +I  L+++ D+ GAE ++
Sbjct: 265 DFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLF 324

Query: 438 EEWLTVKSTYDPRIANLFIGWYIKEGTVSKAESFFDHMVEVGGKPNSSTWETLADGHTKE 497
           +EW    STYD RI N+ IG Y +EG + KA    +     GGK N+ TWE   D + K 
Sbjct: 325 KEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKS 384

Query: 498 GRVSDALSSWKEAFS---AEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLVGLLR 551
           G ++ AL    +A S    +G K W P P  V A     E++ D+   E L+ +L+
Sbjct: 385 GDMARALECMSKAVSIGKGDGGK-WLPSPETVRALMSYFEQKKDVNGAENLLEILK 437

[Close]
BLAST of Clc05G03390 vs. ExPASy Swiss-Prot
Match: Q9SKU6 (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 9.9e-72
Identity = 156/449 (34.74%), Postives = 249/449 (55.46%), Query Frame = 0 

Query: 131 PMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRFERALEI 190
           P+  ++ + RR++   +P      VL+ W ++G  +   EL  ++K LRK+ RF  AL+I
Sbjct: 33  PLDPYDTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQI 92

Query: 191 YDWMSNREERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGALLNAYVK 250
            DWMS       ++  D AI+LDLI+KV G+  AE +F  +P   ++  +YGALLN Y  
Sbjct: 93  SDWMSEHRVH-EISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYAS 152

Query: 251 SRLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVAEMTEKSIQLDIYS 310
            ++  KAE +  +M+  G+    LP+NVM+ LY+   +Y  VE L+ EM +++++ DI++
Sbjct: 153 KKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFT 212

Query: 311 YNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEECLRRV 370
            N  L +  +    E ME+   + + D+ ++ +W T++  A  YIK GL EKA E LR+ 
Sbjct: 213 VNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKS 272

Query: 371 ESRIVGRDR-IPYHYLISLYGSVGNKEETYRVWNTYKTVFPTIPNLGYHAIISALIRVGD 430
           E  +  + R   Y  L+S YG+ G KEE YR+W+ YK +     N GY ++ISAL+++ D
Sbjct: 273 EQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKEL-DGFYNTGYISVISALLKMDD 332

Query: 431 VEGAEKIYEEWLTVKSTYDPRIANLFIGWYIKEGTVSKAESFFDHMVEVGGKPNSSTWET 490
           +E  EKI EEW    S +D RI +L I  Y K+G + KAE   + +V+     ++STWE 
Sbjct: 333 IEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWER 392

Query: 491 LADGHTKEGRVSDALSSWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLVGLL 550
           LA G+   G++  A+  WK A        WRP    +++  D  E + D+     ++ LL
Sbjct: 393 LALGYKMAGKMEKAVEKWKRAIEV-SKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 452

Query: 551 RQSKYLQDKSYASLI------GLSDKTID 573
            +  ++   SY  L+      GLS K +D
Sbjct: 453 SERGHI---SYDQLLYDMNGAGLSWKIVD 475

[Close]
BLAST of Clc05G03390 vs. ExPASy Swiss-Prot
Match: Q9SY07 (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 4.3e-67
Identity = 144/435 (33.10%), Postives = 254/435 (58.39%), Query Frame = 0 

Query: 156 LNQWENEGKKLTKWELSRVVKELRKYKRFERALEIYDWMSNREERFRLTTSDAAIQLDLI 215
           + +W+ EG  + K+EL+R+V+ELRK KR++ ALEI +WM  +E+  +L   D A+ LDLI
Sbjct: 81  IRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQED-IKLQAGDYAVHLDLI 140

Query: 216 SKVRGITSAEDYFLRLPDNLKDRRIYGALLNAYVKSRLREKAENLLAKMRTKGYATHPLP 275
           SK+RG+ SAE +F  +PD ++      +LL++YV+++L +KAE L  KM   G+    LP
Sbjct: 141 SKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLP 200

Query: 276 FNVMMTLYMNLKEYEKVESLVAEMTEKSIQLDIYSYNIWLSSCGLQGSTEKMEEVYEQMK 335
           +N M+++Y++  ++EKV  L+ E+  ++   DI +YN+WL++       E  E+VY + K
Sbjct: 201 YNHMLSMYISRGQFEKVPVLIKELKIRT-SPDIVTYNLWLTAFASGNDVEGAEKVYLKAK 260

Query: 336 QDRTINANWTTFSTMATMYIKMGLIEKAEECLRRVESRIVGRDRIPYHYLISLYGSVGNK 395
           +++ +N +W T+S +  +Y K   +EKA   L+ +E  +  ++R+ Y  LISL+ ++G+K
Sbjct: 261 EEK-LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANLGDK 320

Query: 396 EETYRVWNTYKTVFPTIPNLGYHAIISALIRVGDVEGAEKIYEEWLTVKSTYDPRIANLF 455
           +     W   K+ F  + +  Y ++ISA++++G+ E A+ +Y+EW +V  T D RI NL 
Sbjct: 321 DGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLI 380

Query: 456 IGWYIKEGTVSKAESFFDHMVEVGGKPNSSTWETLADGHTKEGRVSDALSSWKEAFSAEG 515
           +  Y+    V   E F++ +VE G  P+ STWE L   + K   +   L  + +A   + 
Sbjct: 381 LAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAI--DS 440

Query: 516 SKSWRPKPYNVLAYFDLCEKEGDIASKEVLVGLLRQSKYLQDKSYASLIGLSDKTIDND- 575
            K W      V       E++G++   E L+ LL+++ Y+  + Y SL+    K  +   
Sbjct: 441 VKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLLRTYAKAGEMAL 500

Query: 576 VVSEKGSNIDDEIDK 590
           +V E+ +  + E+D+
Sbjct: 501 IVEERMAKDNVELDE 510

[Close]
BLAST of Clc05G03390 vs. ExPASy Swiss-Prot
Match: Q3E911 (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX=3702 GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 4.0e-65
Identity = 136/404 (33.66%), Postives = 221/404 (54.70%), Query Frame = 0 

Query: 140 RRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRFERALEIYDWMSNREE 199
           + I     P     S+L +  + G  ++  EL  + K L +  R++ AL++ +WM N+++
Sbjct: 42  KEILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKD 101

Query: 200 RFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRI----YGALLNAYVKSRLRE 259
               +  D A++LDLI K  G+   E+YF +L  +    R+    Y  LL AYVK+++ +
Sbjct: 102 -IEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVK 161

Query: 260 KAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVAEMTEKSIQLDIYSYNIWL 319
           +AE L+ K+   G+   P PFN MM LY    +YEKV  +V+ M    I  ++ SYN+W+
Sbjct: 162 EAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWM 221

Query: 320 SSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEECLRRVESRIV 379
           ++C        +E VY++M  D+++   W++  T+A +YIK G  EKA   L   E  + 
Sbjct: 222 NACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLN 281

Query: 380 GRDRIPYHYLISLYGSVGNKEETYRVWNTYKTVFPTIPNLGYHAIISALIRVGDVEGAEK 439
             +R+ Y +LI+LY S+GNKE   R+W   K+V   I  + Y  ++S+L++ GD+E AE+
Sbjct: 282 RSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAER 341

Query: 440 IYEEWLTVKSTYDPRIANLFIGWYIKEGTVSKAESFFDHMVEVGGKPNSSTWETLADGHT 499
           ++ EW      YD R++N+ +G Y++ G + KAES    ++E GG PN  TWE L +G  
Sbjct: 342 VFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWV 401

Query: 500 KEGRVSDALSSWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDI 540
           K   +  A+ +  + F       WRP    V+A  +  EKE  I
Sbjct: 402 KCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKI 444

[Close]
BLAST of Clc05G03390 vs. ExPASy TrEMBL
Match: A0A5D3D0Y4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003570 PE=4 SV=1)

HSP 1 Score: 992.6 bits (2565), Expect = 6.9e-286
Identity = 496/537 (92.36%), Postives = 512/537 (95.34%), Query Frame = 0 

Query: 67  MLLQTSVHHRTVSLSSSTSYSRKLPPLIQSQAFRQNVNYRRLPLSVTCSISQVHSYGTVD 126
           MLLQTSVHHRTVSL SS SYSRK  P IQSQ F  NVNYRRL LSVTCSISQVHSYGTVD
Sbjct: 1   MLLQTSVHHRTVSLPSSVSYSRKFLPPIQSQPFFHNVNYRRLRLSVTCSISQVHSYGTVD 60

Query: 127 FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRFER 186
           FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGK LTKWELSRVVKELRKYKRFER
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKNLTKWELSRVVKELRKYKRFER 120

Query: 187 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGALLN 246
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGI SAEDYFLRLPDNLKDRRIYGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN 180

Query: 247 AYVKSRLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVAEMTEKSIQL 306
           AY K+R REKAENLLAKMRTKGYATHPLPFNVMMTLYMN+KEYEKV+SLV+EMTEKSIQL
Sbjct: 181 AYAKARQREKAENLLAKMRTKGYATHPLPFNVMMTLYMNVKEYEKVDSLVSEMTEKSIQL 240

Query: 307 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 366
           DIYSYNIWLSSCGLQGST+KMEEVYEQMKQD+TINANWTTFSTMATMYIKMGLIEKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTDKMEEVYEQMKQDKTINANWTTFSTMATMYIKMGLIEKAEEC 300

Query: 367 LRRVESRIVGRDRIPYHYLISLYGSVGNKEETYRVWNTYKTVFPTIPNLGYHAIISALIR 426
           LR+VESRIVGRDRIPYHYLISLYGSVGNKEE YRVWN YK VFPTIPNLGYHAIISALIR
Sbjct: 301 LRKVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360

Query: 427 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYIKEGTVSKAESFFDHMVEVGGKPNSST 486
           VGDVEGAEKIYEEWLTVK+TYDPRIANLFIGWY+KE  +SKAE FFDHMVEVGGKPNSST
Sbjct: 361 VGDVEGAEKIYEEWLTVKATYDPRIANLFIGWYVKEANMSKAEGFFDHMVEVGGKPNSST 420

Query: 487 WETLADGHTKEGRVSDALSSWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 546
           WE LADGHTKEGRVSDAL+SWKEAFS+EGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV
Sbjct: 421 WEILADGHTKEGRVSDALASWKEAFSSEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480

Query: 547 GLLRQSKYLQDKSYASLIGLSDKTIDNDVVSEKGSNIDDEIDKPEFESDDSEMLLKL 604
           G LRQ KYLQDKSYASLIGL D+TIDND VSEKGS+I+DEIDK E+ESDDSEMLLKL
Sbjct: 481 GFLRQPKYLQDKSYASLIGLLDETIDNDEVSEKGSSINDEIDKTEYESDDSEMLLKL 537

[Close]
BLAST of Clc05G03390 vs. ExPASy TrEMBL
Match: A0A1S3AVV3 (pentatricopeptide repeat-containing protein At1g02150 OS=Cucumis melo OX=3656 GN=LOC103483392 PE=4 SV=1)

HSP 1 Score: 992.6 bits (2565), Expect = 6.9e-286
Identity = 496/537 (92.36%), Postives = 512/537 (95.34%), Query Frame = 0 

Query: 67  MLLQTSVHHRTVSLSSSTSYSRKLPPLIQSQAFRQNVNYRRLPLSVTCSISQVHSYGTVD 126
           MLLQTSVHHRTVSL SS SYSRK  P IQSQ F  NVNYRRL LSVTCSISQVHSYGTVD
Sbjct: 1   MLLQTSVHHRTVSLPSSVSYSRKFLPPIQSQPFFHNVNYRRLRLSVTCSISQVHSYGTVD 60

Query: 127 FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRFER 186
           FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGK LTKWELSRVVKELRKYKRFER
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKNLTKWELSRVVKELRKYKRFER 120

Query: 187 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGALLN 246
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGI SAEDYFLRLPDNLKDRRIYGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN 180

Query: 247 AYVKSRLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVAEMTEKSIQL 306
           AY K+R REKAENLLAKMRTKGYATHPLPFNVMMTLYMN+KEYEKV+SLV+EMTEKSIQL
Sbjct: 181 AYAKARQREKAENLLAKMRTKGYATHPLPFNVMMTLYMNVKEYEKVDSLVSEMTEKSIQL 240

Query: 307 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 366
           DIYSYNIWLSSCGLQGST+KMEEVYEQMKQD+TINANWTTFSTMATMYIKMGLIEKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTDKMEEVYEQMKQDKTINANWTTFSTMATMYIKMGLIEKAEEC 300

Query: 367 LRRVESRIVGRDRIPYHYLISLYGSVGNKEETYRVWNTYKTVFPTIPNLGYHAIISALIR 426
           LR+VESRIVGRDRIPYHYLISLYGSVGNKEE YRVWN YK VFPTIPNLGYHAIISALIR
Sbjct: 301 LRKVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360

Query: 427 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYIKEGTVSKAESFFDHMVEVGGKPNSST 486
           VGDVEGAEKIYEEWLTVK+TYDPRIANLFIGWY+KE  +SKAE FFDHMVEVGGKPNSST
Sbjct: 361 VGDVEGAEKIYEEWLTVKATYDPRIANLFIGWYVKEANMSKAEGFFDHMVEVGGKPNSST 420

Query: 487 WETLADGHTKEGRVSDALSSWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 546
           WE LADGHTKEGRVSDAL+SWKEAFS+EGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV
Sbjct: 421 WEILADGHTKEGRVSDALASWKEAFSSEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480

Query: 547 GLLRQSKYLQDKSYASLIGLSDKTIDNDVVSEKGSNIDDEIDKPEFESDDSEMLLKL 604
           G LRQ KYLQDKSYASLIGL D+TIDND VSEKGS+I+DEIDK E+ESDDSEMLLKL
Sbjct: 481 GFLRQPKYLQDKSYASLIGLLDETIDNDEVSEKGSSINDEIDKTEYESDDSEMLLKL 537

[Close]
BLAST of Clc05G03390 vs. ExPASy TrEMBL
Match: A0A6J1D178 (pentatricopeptide repeat-containing protein At1g02150 OS=Momordica charantia OX=3673 GN=LOC111016090 PE=4 SV=1)

HSP 1 Score: 988.4 bits (2554), Expect = 1.3e-284
Identity = 491/537 (91.43%), Postives = 517/537 (96.28%), Query Frame = 0 

Query: 67  MLLQTSVHHRTVSLSSSTSYSRKLPPLIQSQAFRQNVNYRRLPLSVTCSISQVHSYGTVD 126
           MLLQTSVHHRTVSLSSS SYS KLP +I +QAFR+NVN+RRL L+VTCSIS VH+YGTVD
Sbjct: 1   MLLQTSVHHRTVSLSSSISYSGKLPCVIPAQAFRRNVNFRRLSLAVTCSISHVHNYGTVD 60

Query: 127 FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRFER 186
           FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKR+ER
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRYER 120

Query: 187 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGALLN 246
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGALLN 180

Query: 247 AYVKSRLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVAEMTEKSIQL 306
           AYV++RLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLV+EMTEK IQL
Sbjct: 181 AYVRARLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKGIQL 240

Query: 307 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 366
           DIYSYNIWLSSCGLQGSTE ME+VYE MKQDRTINANWTTFSTMATMYIKMGLIEKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTENMEKVYELMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 300

Query: 367 LRRVESRIVGRDRIPYHYLISLYGSVGNKEETYRVWNTYKTVFPTIPNLGYHAIISALIR 426
           LRRVESRIVGRDRIPYHYLISLYGS+GNK+ETYRVWN YKTVFPTIPNLGYHAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPYHYLISLYGSIGNKDETYRVWNIYKTVFPTIPNLGYHAIISALIR 360

Query: 427 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYIKEGTVSKAESFFDHMVEVGGKPNSST 486
           +GDVEGAEKIYEEWL+VK+TYDPRIANLFIGWY+KEG VSKAESFFDHMVEVGGKPNSST
Sbjct: 361 IGDVEGAEKIYEEWLSVKTTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSST 420

Query: 487 WETLADGHTKEGRVSDALSSWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 546
           WETLADGHTKEGRVSDA++SWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEG+I SKEVLV
Sbjct: 421 WETLADGHTKEGRVSDAVASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGEIGSKEVLV 480

Query: 547 GLLRQSKYLQDKSYASLIGLSDKTIDNDVVSEKGSNIDDEIDKPEFESDDSEMLLKL 604
            LLRQSKYLQDKSYASLIGLS+ T+D+ VVS  GS+IDDE D  E+ESDDSE+LLKL
Sbjct: 481 ELLRQSKYLQDKSYASLIGLSNDTVDSSVVSGNGSSIDDERDTTEYESDDSEILLKL 537

[Close]
BLAST of Clc05G03390 vs. ExPASy TrEMBL
Match: A0A0A0L6I4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127020 PE=4 SV=1)

HSP 1 Score: 984.6 bits (2544), Expect = 1.9e-283
Identity = 492/537 (91.62%), Postives = 507/537 (94.41%), Query Frame = 0 

Query: 67  MLLQTSVHHRTVSLSSSTSYSRKLPPLIQSQAFRQNVNYRRLPLSVTCSISQVHSYGTVD 126
           MLLQTSVHHRTVSL S  SYSRK  PLIQSQ F  NVNYRRLPLSVTCSISQVHSYGTVD
Sbjct: 1   MLLQTSVHHRTVSLPSPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSISQVHSYGTVD 60

Query: 127 FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRFER 186
           FERRPM KWNAIYRRISLMENPELGSASVLNQWENEGK +TKWELSRVVKELRKYKRFER
Sbjct: 61  FERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFER 120

Query: 187 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGALLN 246
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGI SAE+YFLRLP++LKDRRIYGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLN 180

Query: 247 AYVKSRLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVAEMTEKSIQL 306
           AY K R REKAENLL KMRTKG+ THPLPFNVMMTLYMN+KEYEKVESLV+EMTE SIQL
Sbjct: 181 AYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQL 240

Query: 307 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 366
           DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGL+EKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEEC 300

Query: 367 LRRVESRIVGRDRIPYHYLISLYGSVGNKEETYRVWNTYKTVFPTIPNLGYHAIISALIR 426
           LRRVESRIVGRDRIPYHYLISLYGSVGNKEE YRVWN YK VFPTIPNLGYHAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360

Query: 427 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYIKEGTVSKAESFFDHMVEVGGKPNSST 486
           VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWY+KEG  SKAESFFDHMVEVGGKPNSST
Sbjct: 361 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSST 420

Query: 487 WETLADGHTKEGRVSDALSSWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 546
           WE L D HTKEGRVSDAL+SWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV
Sbjct: 421 WEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480

Query: 547 GLLRQSKYLQDKSYASLIGLSDKTIDNDVVSEKGSNIDDEIDKPEFESDDSEMLLKL 604
           GLLRQ KYLQDK+YASLIGL D+TIDN+ VSEKGSNI+DEIDK E+ESDDSEM LKL
Sbjct: 481 GLLRQPKYLQDKTYASLIGLLDETIDNNEVSEKGSNINDEIDKTEYESDDSEMFLKL 537

[Close]
BLAST of Clc05G03390 vs. ExPASy TrEMBL
Match: A0A6J1FT28 (pentatricopeptide repeat-containing protein At1g02150 OS=Cucurbita moschata OX=3662 GN=LOC111447886 PE=4 SV=1)

HSP 1 Score: 921.8 bits (2381), Expect = 1.5e-264
Identity = 455/537 (84.73%), Postives = 497/537 (92.55%), Query Frame = 0 

Query: 67  MLLQTSVHHRTVSLSSSTSYSRKLPPLIQSQAFRQNVNYRRLPLSVTCSISQVHSYGTVD 126
           MLLQTSVHH  VSLSSSTSYS KLPP+IQSQAF +NVNYRRLPLS+TCS+SQ HSYGTVD
Sbjct: 1   MLLQTSVHHCNVSLSSSTSYSHKLPPVIQSQAFFRNVNYRRLPLSITCSVSQTHSYGTVD 60

Query: 127 FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRFER 186
           FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKK+TKWE+ RV+KELRKY+R+ER
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRRYER 120

Query: 187 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGALLN 246
           ALEIYDWMSNR E F+LT SDAAIQLDLISKV GI SAEDYF+RLP NLKDRR YGALLN
Sbjct: 121 ALEIYDWMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRRTYGALLN 180

Query: 247 AYVKSRLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVAEMTEKSIQL 306
           AYVK+R REKAE+LLAKMRTKGYA H L FNVMMTLY+N KEYEKVESLV+EM EK I+L
Sbjct: 181 AYVKARQREKAESLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKGIRL 240

Query: 307 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 366
           DIYSYNIW+SS GLQGS EKMEEVYE+MKQDRTINANWTTFSTMATMYIK G+IEKAEEC
Sbjct: 241 DIYSYNIWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGMIEKAEEC 300

Query: 367 LRRVESRIVGRDRIPYHYLISLYGSVGNKEETYRVWNTYKTVFPTIPNLGYHAIISALIR 426
           LRRVESRIVGRDRIP+HYL+SLYGSVGNKEETYRVW  YKT+FPTIPNLGYHAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGYHAIISALIR 360

Query: 427 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYIKEGTVSKAESFFDHMVEVGGKPNSST 486
            GD+EGAEKIYEEWL+VK+ YDPRIANLF+GWY+KEG  SKAESFF+HMVE GGKPNSS+
Sbjct: 361 AGDIEGAEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPNSSS 420

Query: 487 WETLADGHTKEGRVSDALSSWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 546
           WE LADG +KEGRVSDAL+SWKEAFSAEGS++WRPK + VLA+F+LCEKEGDIASKEVLV
Sbjct: 421 WEILADGLSKEGRVSDALASWKEAFSAEGSRTWRPKHFKVLAFFNLCEKEGDIASKEVLV 480

Query: 547 GLLRQSKYLQDKSYASLIGLSDKTIDNDVVSEKGSNIDDEIDKPEFESDDSEMLLKL 604
           GLLRQSK LQDKSY SLIGLSD+TIDNDVVS +GSNIDDE DK  +E+DDSEMLL++
Sbjct: 481 GLLRQSKCLQDKSYVSLIGLSDETIDNDVVSGEGSNIDDESDKTVYETDDSEMLLEM 537

[Close]
BLAST of Clc05G03390 vs. TAIR 10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 679.9 bits (1753), Expect = 1.9e-195
Identity = 332/514 (64.59%), Postives = 414/514 (80.54%), Query Frame = 0 

Query: 67  MLLQTSVHHRTVSLSSSTSYSRKL---PPLIQSQAFRQNVNYRRLPLSVTCSISQVHSYG 126
           MLLQ +V +R V L+SS SYSR L    P++   A  +         ++ CSISQV+ YG
Sbjct: 1   MLLQAAVQNRNVPLASSASYSRLLRCRSPVVSVAALSKKT------AAIVCSISQVYGYG 60

Query: 127 TVDFERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKR 186
           TVD+ERRP+V+WNAIY++ISLME PELG+ASVLNQWE  G+KLTKWEL RVVKELRKYKR
Sbjct: 61  TVDYERRPIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKR 120

Query: 187 FERALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGA 246
             +ALE+YDWM+NR ERFRL+ SDAAIQLDLI KVRGI  AE++FL+LP+N KDRR+YG+
Sbjct: 121 ANQALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGS 180

Query: 247 LLNAYVKSRLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVAEMTEKS 306
           LLNAYV+++ REKAE LL  MR KGYA HPLPFNVMMTLYMNL+EY+KV+++V EM +K 
Sbjct: 181 LLNAYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKD 240

Query: 307 IQLDIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKA 366
           I+LDIYSYNIWLSSCG  GS EKME VY+QMK D +I  NWTTFSTMATMYIKMG  EKA
Sbjct: 241 IRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKA 300

Query: 367 EECLRRVESRIVGRDRIPYHYLISLYGSVGNKEETYRVWNTYKTVFPTIPNLGYHAIISA 426
           E+ LR+VE+RI GR+RIPYHYL+SLYGS+GNK+E YRVW+ YK+V P+IPNLGYHA++S+
Sbjct: 301 EDALRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSS 360

Query: 427 LIRVGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYIKEGTVSKAESFFDHMVEVGGKPN 486
           L+R+GD+EGAEK+YEEWL VKS+YDPRI NL +  Y+K   +  AE  FDHMVE+GGKP+
Sbjct: 361 LVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPS 420

Query: 487 SSTWETLADGHTKEGRVSDALSSWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKE 546
           SSTWE LA GHT++  +S+AL+  + AFSAEGS +WRPK   +  +F LCE+E D+ SKE
Sbjct: 421 SSTWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKE 480

Query: 547 VLVGLLRQSKYLQDKSYASLIGLSD-KTIDNDVV 577
            ++ LLRQS  L+DKSY +LI + + +T++N  +
Sbjct: 481 AVLELLRQSGDLEDKSYLALIDVDENRTVNNSEI 508

[Close]
BLAST of Clc05G03390 vs. TAIR 10
Match: AT1G60770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 275.4 bits (703), Expect = 1.1e-73
Identity = 149/416 (35.82%), Postives = 228/416 (54.81%), Query Frame = 0 

Query: 138 IYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRFERALEIYDWMSNR 197
           +Y R+      E+     LNQ+    K + KWE+   +K+LR    +  AL++ + M   
Sbjct: 25  LYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVM--E 84

Query: 198 EERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGALLNAYVKSRLREKA 257
           E     T SD AI LDL++K R IT+ E+YF+ LP+  K    YG+LLN Y K  L EKA
Sbjct: 85  ERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKA 144

Query: 258 ENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVAEMTEKSIQLDIYSYNIWLSS 317
           E LL KM+        + +N +MTLY    E EKV +++ E+  +++  D Y+YN+W+ +
Sbjct: 145 EGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRA 204

Query: 318 CGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEECLRRVESRIVGR 377
                    +E V E+M +D  +  +WTT+S MA++Y+  GL +KAE+ L+ +E +   R
Sbjct: 205 LAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQR 264

Query: 378 DRIPYHYLISLYGSVGNKEETYRVWNTYKTVFPTIPNLGYHAIISALIRVGDVEGAEKIY 437
           D   Y +LI+LYG +G   E YR+W + +   P   N+ Y  +I  L+++ D+ GAE ++
Sbjct: 265 DFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLF 324

Query: 438 EEWLTVKSTYDPRIANLFIGWYIKEGTVSKAESFFDHMVEVGGKPNSSTWETLADGHTKE 497
           +EW    STYD RI N+ IG Y +EG + KA    +     GGK N+ TWE   D + K 
Sbjct: 325 KEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKS 384

Query: 498 GRVSDALSSWKEAFS---AEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLVGLLR 551
           G ++ AL    +A S    +G K W P P  V A     E++ D+   E L+ +L+
Sbjct: 385 GDMARALECMSKAVSIGKGDGGK-WLPSPETVRALMSYFEQKKDVNGAENLLEILK 437

[Close]
BLAST of Clc05G03390 vs. TAIR 10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 272.7 bits (696), Expect = 7.0e-73
Identity = 156/449 (34.74%), Postives = 249/449 (55.46%), Query Frame = 0 

Query: 131 PMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRFERALEI 190
           P+  ++ + RR++   +P      VL+ W ++G  +   EL  ++K LRK+ RF  AL+I
Sbjct: 33  PLDPYDTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQI 92

Query: 191 YDWMSNREERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGALLNAYVK 250
            DWMS       ++  D AI+LDLI+KV G+  AE +F  +P   ++  +YGALLN Y  
Sbjct: 93  SDWMSEHRVH-EISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYAS 152

Query: 251 SRLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVAEMTEKSIQLDIYS 310
            ++  KAE +  +M+  G+    LP+NVM+ LY+   +Y  VE L+ EM +++++ DI++
Sbjct: 153 KKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFT 212

Query: 311 YNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEECLRRV 370
            N  L +  +    E ME+   + + D+ ++ +W T++  A  YIK GL EKA E LR+ 
Sbjct: 213 VNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKS 272

Query: 371 ESRIVGRDR-IPYHYLISLYGSVGNKEETYRVWNTYKTVFPTIPNLGYHAIISALIRVGD 430
           E  +  + R   Y  L+S YG+ G KEE YR+W+ YK +     N GY ++ISAL+++ D
Sbjct: 273 EQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKEL-DGFYNTGYISVISALLKMDD 332

Query: 431 VEGAEKIYEEWLTVKSTYDPRIANLFIGWYIKEGTVSKAESFFDHMVEVGGKPNSSTWET 490
           +E  EKI EEW    S +D RI +L I  Y K+G + KAE   + +V+     ++STWE 
Sbjct: 333 IEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWER 392

Query: 491 LADGHTKEGRVSDALSSWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLVGLL 550
           LA G+   G++  A+  WK A        WRP    +++  D  E + D+     ++ LL
Sbjct: 393 LALGYKMAGKMEKAVEKWKRAIEV-SKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 452

Query: 551 RQSKYLQDKSYASLI------GLSDKTID 573
            +  ++   SY  L+      GLS K +D
Sbjct: 453 SERGHI---SYDQLLYDMNGAGLSWKIVD 475

[Close]
BLAST of Clc05G03390 vs. TAIR 10
Match: AT4G02820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 257.3 bits (656), Expect = 3.1e-68
Identity = 144/435 (33.10%), Postives = 254/435 (58.39%), Query Frame = 0 

Query: 156 LNQWENEGKKLTKWELSRVVKELRKYKRFERALEIYDWMSNREERFRLTTSDAAIQLDLI 215
           + +W+ EG  + K+EL+R+V+ELRK KR++ ALEI +WM  +E+  +L   D A+ LDLI
Sbjct: 81  IRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQED-IKLQAGDYAVHLDLI 140

Query: 216 SKVRGITSAEDYFLRLPDNLKDRRIYGALLNAYVKSRLREKAENLLAKMRTKGYATHPLP 275
           SK+RG+ SAE +F  +PD ++      +LL++YV+++L +KAE L  KM   G+    LP
Sbjct: 141 SKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLP 200

Query: 276 FNVMMTLYMNLKEYEKVESLVAEMTEKSIQLDIYSYNIWLSSCGLQGSTEKMEEVYEQMK 335
           +N M+++Y++  ++EKV  L+ E+  ++   DI +YN+WL++       E  E+VY + K
Sbjct: 201 YNHMLSMYISRGQFEKVPVLIKELKIRT-SPDIVTYNLWLTAFASGNDVEGAEKVYLKAK 260

Query: 336 QDRTINANWTTFSTMATMYIKMGLIEKAEECLRRVESRIVGRDRIPYHYLISLYGSVGNK 395
           +++ +N +W T+S +  +Y K   +EKA   L+ +E  +  ++R+ Y  LISL+ ++G+K
Sbjct: 261 EEK-LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANLGDK 320

Query: 396 EETYRVWNTYKTVFPTIPNLGYHAIISALIRVGDVEGAEKIYEEWLTVKSTYDPRIANLF 455
           +     W   K+ F  + +  Y ++ISA++++G+ E A+ +Y+EW +V  T D RI NL 
Sbjct: 321 DGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLI 380

Query: 456 IGWYIKEGTVSKAESFFDHMVEVGGKPNSSTWETLADGHTKEGRVSDALSSWKEAFSAEG 515
           +  Y+    V   E F++ +VE G  P+ STWE L   + K   +   L  + +A   + 
Sbjct: 381 LAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAI--DS 440

Query: 516 SKSWRPKPYNVLAYFDLCEKEGDIASKEVLVGLLRQSKYLQDKSYASLIGLSDKTIDND- 575
            K W      V       E++G++   E L+ LL+++ Y+  + Y SL+    K  +   
Sbjct: 441 VKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLLRTYAKAGEMAL 500

Query: 576 VVSEKGSNIDDEIDK 590
           +V E+ +  + E+D+
Sbjct: 501 IVEERMAKDNVELDE 510

[Close]
BLAST of Clc05G03390 vs. TAIR 10
Match: AT5G27460.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 250.8 bits (639), Expect = 2.9e-66
Identity = 136/404 (33.66%), Postives = 221/404 (54.70%), Query Frame = 0 

Query: 140 RRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRFERALEIYDWMSNREE 199
           + I     P     S+L +  + G  ++  EL  + K L +  R++ AL++ +WM N+++
Sbjct: 42  KEILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKD 101

Query: 200 RFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRI----YGALLNAYVKSRLRE 259
               +  D A++LDLI K  G+   E+YF +L  +    R+    Y  LL AYVK+++ +
Sbjct: 102 -IEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVK 161

Query: 260 KAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVAEMTEKSIQLDIYSYNIWL 319
           +AE L+ K+   G+   P PFN MM LY    +YEKV  +V+ M    I  ++ SYN+W+
Sbjct: 162 EAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWM 221

Query: 320 SSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEECLRRVESRIV 379
           ++C        +E VY++M  D+++   W++  T+A +YIK G  EKA   L   E  + 
Sbjct: 222 NACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLN 281

Query: 380 GRDRIPYHYLISLYGSVGNKEETYRVWNTYKTVFPTIPNLGYHAIISALIRVGDVEGAEK 439
             +R+ Y +LI+LY S+GNKE   R+W   K+V   I  + Y  ++S+L++ GD+E AE+
Sbjct: 282 RSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAER 341

Query: 440 IYEEWLTVKSTYDPRIANLFIGWYIKEGTVSKAESFFDHMVEVGGKPNSSTWETLADGHT 499
           ++ EW      YD R++N+ +G Y++ G + KAES    ++E GG PN  TWE L +G  
Sbjct: 342 VFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWV 401

Query: 500 KEGRVSDALSSWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDI 540
           K   +  A+ +  + F       WRP    V+A  +  EKE  I
Sbjct: 402 KCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKI 444

The following BLAST results are available for this feature:
BLAST of Clc05G03390 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038903663.12.5e-29896.65pentatricopeptide repeat-containing protein At1g02150 [Benincasa hispida][more]
XP_008438222.11.4e-28592.36PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Cucumis melo] ... [more]
XP_022147061.12.7e-28491.43pentatricopeptide repeat-containing protein At1g02150 [Momordica charantia][more]
XP_004133941.13.9e-28391.62pentatricopeptide repeat-containing protein At1g02150 [Cucumis sativus] >KGN5663... [more]
KAG6597223.11.4e-26484.92Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
BLAST of Clc05G03390 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8LPS62.7e-19464.59Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX... [more]
O227141.5e-7235.82Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX... [more]
Q9SKU69.9e-7234.74Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop... [more]
Q9SY074.3e-6733.10Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop... [more]
Q3E9114.0e-6533.66Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX... [more]
BLAST of Clc05G03390 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D0Y46.9e-28692.36Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3AVV36.9e-28692.36pentatricopeptide repeat-containing protein At1g02150 OS=Cucumis melo OX=3656 GN... [more]
A0A6J1D1781.3e-28491.43pentatricopeptide repeat-containing protein At1g02150 OS=Momordica charantia OX=... [more]
A0A0A0L6I41.9e-28391.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127020 PE=4 SV=1[more]
A0A6J1FT281.5e-26484.73pentatricopeptide repeat-containing protein At1g02150 OS=Cucurbita moschata OX=3... [more]
BLAST of Clc05G03390 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G02150.11.9e-19564.59Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G60770.11.1e-7335.82Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G20710.17.0e-7334.74Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G02820.13.1e-6833.10Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G27460.12.9e-6633.66Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 415..563
e-value: 2.9E-15
score: 58.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 281..414
e-value: 2.0E-20
score: 75.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 145..280
e-value: 2.5E-12
score: 48.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 147..478
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 240..268
e-value: 0.0026
score: 17.9
coord: 453..479
e-value: 0.2
score: 12.0
coord: 417..440
e-value: 0.11
score: 12.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 240..269
e-value: 0.0016
score: 16.5
coord: 309..337
e-value: 4.3E-6
score: 24.5
coord: 276..307
e-value: 0.0029
score: 15.7
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 294..354
e-value: 1.5E-6
score: 28.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 448..482
score: 9.021208
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 237..271
score: 9.602157
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 307..337
score: 8.823904
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 580..603
NoneNo IPR availablePANTHERPTHR45717:SF3OSJNBB0038F03.9 PROTEINcoord: 96..567
NoneNo IPR availablePANTHERPTHR45717OS12G0527900 PROTEINcoord: 96..567

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc05G03390.2Clc05G03390.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003729 mRNA binding
molecular_function GO:0005515 protein binding