Clc05G03250 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCAATCCAAAATAGTGAGGGAAAGTATAATTTAAATGAAAGAAATAGGAAAATATAAAAGAAGGTGATAGAGAGCGAATAGAAACAGCTCCACTTCGAGGAGGGGCAAAATGGCTTCGTCCCTTTGCTTGCATTTACAAACTTGCTCGCACCTCCGCTGCATTGCGGCTGCAAAGGCGGCGGCGCCGTCGATGGTCGCAACTGCAAACAAAAGCTTGTGTCCGTTTCTAAAACGACCATTTCTTCCAAACTTCTGTTTACCATCGGGCTCTTCCGCCGACCTTTGCGAGCGGCAACCCCTCCGGAGTCCGGAATTGGTGGCGTTGGAATATGCCGACCTTAATCTCTCTTATAAAATCTTCGAGGTTTGTGTCTATGTTCATAAATTTTGCCTCTAATTTCTGAAATCGTTGCCGAGTAATTGAAAATTGAATGTACTGATTAGAATTGATGTGCATTTTTCTTGGTTTTCGTATAATTGCAGGAGGCGGGCCACGTTAGAGTCAGGCAGCATGTTAATCCTCTTAGCTCTTCTTTCTCTGTATGTAATTTGAAGAGCAATTGAAGGAATTGTGGGTTTGAAATTTCAGCTTAGTGCTGGTTAATTGAAGGAAGGCTCTCCCTCTTTTACCTTTCAGGTCCCTACACCAGCACCAAACTGGGATGAAGTCTTCAAGGACCCCAAATTGCCCCTCATGGTCGATATAGGAAGTGGTGAGTGAGATGATGCATTTTCTGTTATATACCTATAAATATCTGTTTTTTTCACAATACCTACTTCTTTTGTATTCGAGCTACTTATGCATACCTGGATTTCATTGGACAATATTTGATTATCTATAACATTTGGCTGAATCCATGTCCGTTATGAACTGTTTGAGATTGAGAGTGATTTCAAAATGGTTAAAATCATAATTGTCATGTTCAAAATCTCTATGAAACATGCTTTTTATCATTCTAAATCAAATTTGATGGTATGAAAATAGTGTTTAGAAGTGTAAAATTAAACAATAAATTGATTTAAATTGATTAAAGACACAATGTTCAAGGAATGATTTTGAAGCTAACAAAAGTGATATTTTAAAATCACTCTCAAATATGGCATTATTATAGTCTGTCTCTTACCCATTATCTGCCAGCTTGGGTAAGCTAAACAGAGGATAGCCATGAAAAAATCTTTGAAGCTACTGCTTGATTTGAAAAAGAAGATCAAAAGACAGATATATTTAGAGATTCTGCCATTTTCTTAACCATGGTTTGATGATATTCAATTAACCAGCATGAAGAAGTCATAGAAACCAAGTAAATTGGGCTGGTAAGAAAATTGTATCAAACGATTGTTAATATCTTAAAAGGGAAATATTATCCTCAAGCATCATATTGATTACTGCATTCAGCGATCTTATTTACCTGGCACTTTGACTCAAAATTCAACTTGATATGCATGATAAAGCAACTCTAAATATGAAACAGTACGGCACATGTGGAGAAAAATACGCTATTCAATAGCAGCTATGAGCCATCCACCTTGATTTAAACATTGGGCTAGCTAGTGAAAGTTAATACAATATCAGTTACCTAAGTTGACCTGGAGAATTTACCTAGGAAAAGATTCTTGGTAAAAATATTATTGTTTCAAATGCTCCAATGGCCGAGCATATCACATGTATGCACGAAAATTATTTATCAGATATAATGTGATCTAATTTGCATCTTTACTCTTAAAAATGTTAGTTACAATTGATGAAAATCTTGATTATCTCTCAATTTTGGTTTTACTAGCCTCATTACATACTTTTTGTGGGATTCATGAGGCTGTTTTATACTTTCTTTGCCCATCAAGATTTTAACAGAACAAGTATTCCTATTCCCAGGTAGTGGCAGATTTCTCTTGTGGCTTGCAAAAAGACACCTTGATTCAAGAAATTTCTTGGGTCTCGAAATACGACAGAAAGTACGGAACTGAAAATTTTCACTTTTGACGTACTCTTAATTGATCTGAACTATTTGATCCTCATTCTCTGGAGGCCTTAGTTTGTACTTCGCTTTCTTTTGTGCTCTTGCAGCTGGTCAAGCGTGCTGATATCTGGGTTAAAGAGTTGGGATTTAGCAATGTGTAAGGACCTTAACTTCATATCAGGTAGTGAAAAGCAAGATCACCTTTTCGCTATTGGTACATTAGTAATGAACTTGCTTTTTAAACTTGATTGCAGACATTTCATGTTTGCAAATGCTACAATTTCTTTTAAACAGATTATATCTTCATATCCCGGACCCCTGATGCTGGTTTCCATACTGGTTAGTGCACAACCATTCATACTTTCATAGCACACTAACCCAAACAATTTAACCTGAACTTCCCCATTGATTCGATTCGATTAATCGACAAAGATAGAACTCACTTGTGTTTAATCTCATTGCAGTGCCCAGATCCCCATTTTAAGAAACGACATCATAAGCGAAGGGTTTTGCAGAAGCCTTTAGTAGAATCTATAGTAGACAGTTTAATGCCAGGAGGGCAGGTATATGATTTGGTTATTCGCCTAACATTGAATGTTCTTTTGCCTGTGCTGTTTCAACCTGATGTGATGCAATATGCAATATGATGATTATTCTATATGATTCAACAGGTGTTCATACAATCTGACGTGCTCGAAGTGGCAGATGACATGAGACTTTGGTTCGATTCCAAAGCCAATGTTCTCAAACACATCGACAAGCTTGACCGGAGTTTTTTGTGTGATAAAGATGGATGGTTGTTGAAGAATCCAATGGGAATAAGGACTGAAAGAGAAATTCATGCTGAATCAGAAGGATCAAACATTTATAGAAGAATGTATCAAAAGTATACTTGACAAAAGAATAACTTACTAAATGGATTGTTTAATCATAATCTGTTTGCATTTGAGTCATCATTGCCTGTTATTTCTTTTGAGGCCGTCTGCCTATTAGTGTTATTGGGAAGTTATATAATATTTTCTAGACATATATTTATTGCACGTTTATAAAAATAAGAAAAAACTAACTTTTCTTCTTC ATCAATCCAAAATAGTGAGGGAAAGTATAATTTAAATGAAAGAAATAGGAAAATATAAAAGAAGGTGATAGAGAGCGAATAGAAACAGCTCCACTTCGAGGAGGGGCAAAATGGCTTCGTCCCTTTGCTTGCATTTACAAACTTGCTCGCACCTCCGCTGCATTGCGGCTGCAAAGGCGGCGGCGCCGTCGATGGTCGCAACTGCAAACAAAAGCTTGTGTCCGTTTCTAAAACGACCATTTCTTCCAAACTTCTGTTTACCATCGGGCTCTTCCGCCGACCTTTGCGAGCGGCAACCCCTCCGGAGTCCGGAATTGGTGGCGTTGGAATATGCCGACCTTAATCTCTCTTATAAAATCTTCGAGGAGGCGGGCCACGTTAGAGTCAGGCAGCATGTTAATCCTCTTAGCTCTTCTTTCTCTGTCCCTACACCAGCACCAAACTGGGATGAAGTCTTCAAGGACCCCAAATTGCCCCTCATGGTCGATATAGGAAGTGGTAGTGGCAGATTTCTCTTGTGGCTTGCAAAAAGACACCTTGATTCAAGAAATTTCTTGGGTCTCGAAATACGACAGAAACTGGTCAAGCGTGCTGATATCTGGGTTAAAGAGTTGGGATTTAGCAATGTACATTTCATGTTTGCAAATGCTACAATTTCTTTTAAACAGATTATATCTTCATATCCCGGACCCCTGATGCTGGTTTCCATACTGTGCCCAGATCCCCATTTTAAGAAACGACATCATAAGCGAAGGGTTTTGCAGAAGCCTTTAGTAGAATCTATAGTAGACAGTTTAATGCCAGGAGGGCAGGTGTTCATACAATCTGACGTGCTCGAAGTGGCAGATGACATGAGACTTTGGTTCGATTCCAAAGCCAATGTTCTCAAACACATCGACAAGCTTGACCGGAGTTTTTTGTGTGATAAAGATGGATGGTTGTTGAAGAATCCAATGGGAATAAGGACTGAAAGAGAAATTCATGCTGAATCAGAAGGATCAAACATTTATAGAAGAATGTATCAAAAGTATACTTGACAAAAGAATAACTTACTAAATGGATTGTTTAATCATAATCTGTTTGCATTTGAGTCATCATTGCCTGTTATTTCTTTTGAGGCCGTCTGCCTATTAGTGTTATTGGGAAGTTATATAATATTTTCTAGACATATATTTATTGCACGTTTATAAAAATAAGAAAAAACTAACTTTTCTTCTTC ATGGCTTCGTCCCTTTGCTTGCATTTACAAACTTGCTCGCACCTCCGCTGCATTGCGGCTGCAAAGGCGGCGGCGCCGTCGATGGTCGCAACTGCAAACAAAAGCTTGTGTCCGTTTCTAAAACGACCATTTCTTCCAAACTTCTGTTTACCATCGGGCTCTTCCGCCGACCTTTGCGAGCGGCAACCCCTCCGGAGTCCGGAATTGGTGGCGTTGGAATATGCCGACCTTAATCTCTCTTATAAAATCTTCGAGGAGGCGGGCCACGTTAGAGTCAGGCAGCATGTTAATCCTCTTAGCTCTTCTTTCTCTGTCCCTACACCAGCACCAAACTGGGATGAAGTCTTCAAGGACCCCAAATTGCCCCTCATGGTCGATATAGGAAGTGGTAGTGGCAGATTTCTCTTGTGGCTTGCAAAAAGACACCTTGATTCAAGAAATTTCTTGGGTCTCGAAATACGACAGAAACTGGTCAAGCGTGCTGATATCTGGGTTAAAGAGTTGGGATTTAGCAATGTACATTTCATGTTTGCAAATGCTACAATTTCTTTTAAACAGATTATATCTTCATATCCCGGACCCCTGATGCTGGTTTCCATACTGTGCCCAGATCCCCATTTTAAGAAACGACATCATAAGCGAAGGGTTTTGCAGAAGCCTTTAGTAGAATCTATAGTAGACAGTTTAATGCCAGGAGGGCAGGTGTTCATACAATCTGACGTGCTCGAAGTGGCAGATGACATGAGACTTTGGTTCGATTCCAAAGCCAATGTTCTCAAACACATCGACAAGCTTGACCGGAGTTTTTTGTGTGATAAAGATGGATGGTTGTTGAAGAATCCAATGGGAATAAGGACTGAAAGAGAAATTCATGCTGAATCAGAAGGATCAAACATTTATAGAAGAATGTATCAAAAGTATACTTGA MASSLCLHLQTCSHLRCIAAAKAAAPSMVATANKSLCPFLKRPFLPNFCLPSGSSADLCERQPLRSPELVALEYADLNLSYKIFEEAGHVRVRQHVNPLSSSFSVPTPAPNWDEVFKDPKLPLMVDIGSGSGRFLLWLAKRHLDSRNFLGLEIRQKLVKRADIWVKELGFSNVHFMFANATISFKQIISSYPGPLMLVSILCPDPHFKKRHHKRRVLQKPLVESIVDSLMPGGQVFIQSDVLEVADDMRLWFDSKANVLKHIDKLDRSFLCDKDGWLLKNPMGIRTEREIHAESEGSNIYRRMYQKYT Homology
BLAST of Clc05G03250 vs. NCBI nr
Match: XP_038879912.1 (tRNA (guanine-N(7)-)-methyltransferase [Benincasa hispida]) HSP 1 Score: 581.3 bits (1497), Expect = 5.1e-162 Identity = 285/307 (92.83%), Postives = 296/307 (96.42%), Query Frame = 0
BLAST of Clc05G03250 vs. NCBI nr
Match: XP_023527130.1 (uncharacterized protein LOC111790461 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 559.7 bits (1441), Expect = 1.6e-155 Identity = 274/310 (88.39%), Postives = 291/310 (93.87%), Query Frame = 0
BLAST of Clc05G03250 vs. NCBI nr
Match: KAG6582546.1 (hypothetical protein SDJN03_22548, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 558.5 bits (1438), Expect = 3.5e-155 Identity = 274/310 (88.39%), Postives = 290/310 (93.55%), Query Frame = 0
BLAST of Clc05G03250 vs. NCBI nr
Match: XP_022924717.1 (uncharacterized protein LOC111432133 [Cucurbita moschata]) HSP 1 Score: 557.8 bits (1436), Expect = 6.0e-155 Identity = 273/310 (88.06%), Postives = 290/310 (93.55%), Query Frame = 0
BLAST of Clc05G03250 vs. NCBI nr
Match: KAG7018929.1 (trmB [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 556.6 bits (1433), Expect = 1.3e-154 Identity = 271/310 (87.42%), Postives = 291/310 (93.87%), Query Frame = 0
BLAST of Clc05G03250 vs. ExPASy Swiss-Prot
Match: Q2JJQ0 (tRNA (guanine-N(7)-)-methyltransferase OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) OX=321332 GN=trmB PE=3 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 3.1e-45 Identity = 103/214 (48.13%), Postives = 131/214 (61.21%), Query Frame = 0
BLAST of Clc05G03250 vs. ExPASy Swiss-Prot
Match: Q2JRH1 (tRNA (guanine-N(7)-)-methyltransferase OS=Synechococcus sp. (strain JA-3-3Ab) OX=321327 GN=trmB PE=3 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 9.0e-45 Identity = 103/211 (48.82%), Postives = 130/211 (61.61%), Query Frame = 0
BLAST of Clc05G03250 vs. ExPASy Swiss-Prot
Match: P73161 (tRNA (guanine-N(7)-)-methyltransferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=trmB PE=3 SV=2) HSP 1 Score: 169.1 bits (427), Expect = 7.9e-41 Identity = 94/217 (43.32%), Postives = 128/217 (58.99%), Query Frame = 0
BLAST of Clc05G03250 vs. ExPASy Swiss-Prot
Match: P72546 (tRNA (guanine-N(7)-)-methyltransferase OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=trmB PE=3 SV=2) HSP 1 Score: 162.2 bits (409), Expect = 9.6e-39 Identity = 92/216 (42.59%), Postives = 131/216 (60.65%), Query Frame = 0
BLAST of Clc05G03250 vs. ExPASy Swiss-Prot
Match: Q5N2X5 (tRNA (guanine-N(7)-)-methyltransferase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=trmB PE=3 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 9.6e-39 Identity = 92/216 (42.59%), Postives = 131/216 (60.65%), Query Frame = 0
BLAST of Clc05G03250 vs. ExPASy TrEMBL
Match: A0A6J1E9S1 (uncharacterized protein LOC111432133 OS=Cucurbita moschata OX=3662 GN=LOC111432133 PE=4 SV=1) HSP 1 Score: 557.8 bits (1436), Expect = 2.9e-155 Identity = 273/310 (88.06%), Postives = 290/310 (93.55%), Query Frame = 0
BLAST of Clc05G03250 vs. ExPASy TrEMBL
Match: A0A6J1ITE1 (uncharacterized protein LOC111479752 OS=Cucurbita maxima OX=3661 GN=LOC111479752 PE=4 SV=1) HSP 1 Score: 555.8 bits (1431), Expect = 1.1e-154 Identity = 272/310 (87.74%), Postives = 289/310 (93.23%), Query Frame = 0
BLAST of Clc05G03250 vs. ExPASy TrEMBL
Match: A0A5A7U1F8 (tRNA (Guanine-N(7)-)-methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003710 PE=4 SV=1) HSP 1 Score: 552.0 bits (1421), Expect = 1.6e-153 Identity = 270/306 (88.24%), Postives = 286/306 (93.46%), Query Frame = 0
BLAST of Clc05G03250 vs. ExPASy TrEMBL
Match: A0A1S3AVT2 (tRNA (Guanine-N(7)-)-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103483376 PE=4 SV=1) HSP 1 Score: 551.2 bits (1419), Expect = 2.7e-153 Identity = 270/306 (88.24%), Postives = 286/306 (93.46%), Query Frame = 0
BLAST of Clc05G03250 vs. ExPASy TrEMBL
Match: A0A0A0L947 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126850 PE=4 SV=1) HSP 1 Score: 548.1 bits (1411), Expect = 2.3e-152 Identity = 271/306 (88.56%), Postives = 286/306 (93.46%), Query Frame = 0
BLAST of Clc05G03250 vs. TAIR 10
Match: AT5G17660.1 (tRNA (guanine-N-7) methyltransferase ) HSP 1 Score: 371.7 bits (953), Expect = 5.7e-103 Identity = 192/319 (60.19%), Postives = 236/319 (73.98%), Query Frame = 0
BLAST of Clc05G03250 vs. TAIR 10
Match: AT5G24840.1 (tRNA (guanine-N-7) methyltransferase ) HSP 1 Score: 67.8 bits (164), Expect = 1.8e-11 Identity = 52/175 (29.71%), Postives = 83/175 (47.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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