Clc05G02620 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G02620
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	CRS2-associated factor 1, mitochondrial
Location	ClcChr05: 1771611 .. 1775188 (+)
RNA-Seq Expression	Clc05G02620
Synteny	Clc05G02620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCGCCAAATTCATATTTTCTCTTATTTTCATCAATTCTTTTGAATCCAAAATGTATGAAGGCCAAAGCTAAACCGAGGTTCGCCGATAAACCCTAAACCCATTCCGGTCTCCCGTCAGTGTTCATCCATGCTCAATCTACCTCATGTTCGTTATCAGAAGACTGTTCCGCCAAAAACCAATTCCGTTTCCTCTTCCTCATACATCTTCCAATCCATGTTTCTTCTACTCCAAACTCCGCGATCACTACGCCTTTGAATCCCCTCCTTCTATCTCCCCATCGCCGGAGCCCAAACCGCGCACAAACAAACCTCCGAAGCCGCGGTACAAACCCCCCTCGTCGCTCGATCTCGCAGACAAGAAGCCAAGGCGTTCAGATTTGCCGTTTGATTTCCAGTACAGTTACACGGAGACTAGCCCCTCGGTGAGGCCTATTGGTCTTCGAGAACCGAAGTATTCGCCATTTGGTCCTGGGCGACTTGATCGTAAATGGACTGGGGTGTGTGCCCCGGCGGTGGACCCGAAGGCGACCTCTGTAGAGGGCATGGAAGATCCAAAACTGGAAGAGAAGAGGAGGGTCATGAGGGAGAATATTCAAGGGGAGCCACTGACAGGAGCCGAGAGAAAGGCCTTGGTGGAGAAGTGTCAAAAGAAGAAAACAAACAGGCAGATTAATATAGGTATGTGATATTATGGGGTGTGCTAACTGCAAAGATTGGAAATTTTGGTTTTTGTTCCAAGTATTGTTGAATTGTGGTGAGAGTATTTGAAAATTTAGGTGGGTTTTTCAATTTTTGTCCTGTTGTACAAGTTACTTTGTTATCTTGGTATTTTTGTTGTATTCGACTATTGGGTTTGATTCTCAAATCAGAGTCTGTACTCTGGAATAGTATTCAAGAAAAAACTGCAGAAATAAGCATGTTCTTAAAAATATATATATAAACTAACGAATGGGCATTATTATACTTGTTTATTGGTATCCATGTTTATGATGTTACTTTTGTAACTTTTTTTTTCCTTTGCTGTCCTTTTAATGGTAGATTATCATTCCACCCCCTTCTGATGTTTGAACCGTGAGGTTTATACAGATATTGACATGTTGATTGATATTTTATTGTATGATAATAAACCCTTTATTATGTGGCATTATTTCTGATAAGTTGATTTTGAGTTTGTATAGTGCAGCATCTTACATATTATCTTAATTTTGGTTGTTCCCTTGCGGAAGTTTCATTAATCTGTTGTTAGCAAATTTAAAGTTGTAGGTCGCGGAATAGTTTGAGAAACTTTAGATAATAGGAAAGTATTAATATTTCTGCATTATTTCACTATTTGGTTCTTACTCTATACGAAAGAAATATTGAGGTTAATAATATGATATGCGGCGTGGTATAATAAAGGATGGTGTTTTCTCACCATCTCTAATTAACAGGTGCTGCATGGATATTGAGATCATCTTATTTGCTGTGCTTACATTACTTCTACGTGTTTGTAGGAAGAGATGGTTTGACTCACAATATGTTAAATGATATTTATAATCACTGGAAACATGCCGAAGCAGTGAGGATCAAATGTCTAGGAGTTCCCACTGTTGATATGAAAAACGTGTGCACGCAACTTGAGGTACGACTTTCATTTCATTGGCTGGAGTCGGATAGAAGTTTTAGTTATTCACTATTGAGGTGTGTTCCACAAATTATATTCAACGTATTGAAAATGTATCTTGACTCATACACTCATCACTTGGCATATTTCTTTGTATTTTTTTTTTAAATCTGTAAATGTCCAGACCAGCTTATAGGCACCTTGACTTATCTCGGGACAACCCGCTTGACCCTACAACATTTGGGTGTCAAGAAAACTCGTAGGATATTAAATCCTAGGTAGGTAGTCACCATGAATTGAACCCATGATCTCTTAGCTATTTATTGAGACTGTCTCATTTTTTACCACTAGGTCAACCCATGATGGTTTTTTTTGTATTGAATTGTATGGAATGATAACCACCCACCTGTACCTATTTATGTATGTTAAATTCGAGCTTTGTCCATGCCTCAGGATAAAACCAATGGAAAGATCATTCATAGGCATGGTGGTTTTCTTGTTCTATACAGAGGGAGAAACTATAATCCCAAGAAAAGGCCATTCATTCCCTTAATGTTATGGAGACCCCATGAACCTATATATCCCAGGCTGATTAAAACTACAATTGATGGACTAAGCATTGATGAGACAAAAGAAATGAGAAAGAAAGGATTAGCTATTCCTGCTTTGACAAAACTTGGTATGTGTTTGAAAACCTTTTTAACTTGTTTCCAGTAATTACTGTATCATCATGAGGTCATTGACTAAGATATCATGTCTGTGAATTTTAGCAAAGAACGGTTACTATGGTAGTTTGGTACCCATGGTTCGAGATGCTTTTCTCTCCTGCGAGTTGGTTCGGATTGACTGTCAAGGCCTCGAGAAGAGTGATTACAAGAAAATTGGCTGCAAGCTTCGGGTAACGGTCATTTACATAACTATTCTCAAATTCTTAGATCTTAGAAAGAAATGCCACGAGTGTTGTTCCCCATATATGCCAAGGTGTGCGAGGGGAACGTAGGACAATCCTATAGAAATTGTATGTTTTATAGGAACTTTTTTTTTTTTGGTCGAGGCGGCTTCTGTTATCCAAATGCCTCGATGAATTCCAGGGTGGGCAAATAGAGTAAATTTAAAGTTGGAAGTACATAGCTTTACTTTAGGCTCTTAATGGTCTTTAAGTATTTAGATTTCATTCAGTGGAGTTAAGAATTGTTTATTGTGACAAAATTTGAATTCTTTTCATTTTCGATCAACTTTCCTTCTTACACAGGACCTTGTGCCTTGTATCTTGGTGACATTTGAGAAGGAGCAGATTGTAGTTTGGAGGGGCAAGGACTACCAGCCCTTAGACTCTGGATGTTATCTTACAGTTAGAGAGTCCTTTGATGATATTGATGGTAATATGAATTGTGTCAACGATGATGAGGACGACGATGATGACAACGATGCGGGCTCTCAATCTGGTAATAACGAGTAGTGCCTTGATTGCTCATATCACAAGTAAATCATTCTACCAAAATATCAATATGGCTTTTTAACCTGGAGATTTGACCCATATTCTTTGCCCATATCTTCTATTGCCTTATTCTTATGCTCTTCCATTGAAGAGAGGGGGAGTGAAAATCCTCTATCTAGAGGTTGCATCTAATTTTTTTGTCAAAGGTATATGCCTTAATCTATTAAACTATATCTAAGTTGAGTTGAACTATGTCTAGATTAGCTTGCCAAGAGAATTGTCTAAAGGGAGGAGTATGGATTATTTATTGTAGTGTTTCATTTAGATTGGTTTCTCTCTTTAGAAACAATTAATCAAAATCCACTACAGAATTCTTCTCTTACCTCCAATGACCTTACTTGAATAGATTTGTTCCATAGGTTATACAACTATTCTCGTCTTAACTTGCTTTCTCTCCTCCTTTGTAATACTTGACAAAAGCTAAGGCCTAATGTTGCTCAAGATTGATGACTTTGAGTTTAATTATTGACTCTGA

mRNA sequence

ATCCGCCAAATTCATATTTTCTCTTATTTTCATCAATTCTTTTGAATCCAAAATGTATGAAGGCCAAAGCTAAACCGAGGTTCGCCGATAAACCCTAAACCCATTCCGGTCTCCCGTCAGTGTTCATCCATGCTCAATCTACCTCATGTTCGTTATCAGAAGACTGTTCCGCCAAAAACCAATTCCGTTTCCTCTTCCTCATACATCTTCCAATCCATGTTTCTTCTACTCCAAACTCCGCGATCACTACGCCTTTGAATCCCCTCCTTCTATCTCCCCATCGCCGGAGCCCAAACCGCGCACAAACAAACCTCCGAAGCCGCGGTACAAACCCCCCTCGTCGCTCGATCTCGCAGACAAGAAGCCAAGGCGTTCAGATTTGCCGTTTGATTTCCAGTACAGTTACACGGAGACTAGCCCCTCGGTGAGGCCTATTGGTCTTCGAGAACCGAAGTATTCGCCATTTGGTCCTGGGCGACTTGATCGTAAATGGACTGGGGTGTGTGCCCCGGCGGTGGACCCGAAGGCGACCTCTGTAGAGGGCATGGAAGATCCAAAACTGGAAGAGAAGAGGAGGGTCATGAGGGAGAATATTCAAGGGGAGCCACTGACAGGAGCCGAGAGAAAGGCCTTGGTGGAGAAGTGTCAAAAGAAGAAAACAAACAGGCAGATTAATATAGGAAGAGATGGTTTGACTCACAATATGTTAAATGATATTTATAATCACTGGAAACATGCCGAAGCAGTGAGGATCAAATGTCTAGGAGTTCCCACTGTTGATATGAAAAACGTGTGCACGCAACTTGAGGTACGACTTTCATTTCATTGGCTGGAGTCGGATAGAAGTTTTAGTTATTCACTATTGAGGTGTGTTCCACAAATTATATTCAACGATAAAACCAATGGAAAGATCATTCATAGGCATGGTGGTTTTCTTGTTCTATACAGAGGGAGAAACTATAATCCCAAGAAAAGGCCATTCATTCCCTTAATGTTATGGAGACCCCATGAACCTATATATCCCAGGCTGATTAAAACTACAATTGATGGACTAAGCATTGATGAGACAAAAGAAATGAGAAAGAAAGGATTAGCTATTCCTGCTTTGACAAAACTTGCAAAGAACGGTTACTATGGTAGTTTGGTACCCATGGTTCGAGATGCTTTTCTCTCCTGCGAGTTGGTTCGGATTGACTGTCAAGGCCTCGAGAAGAGTGATTACAAGAAAATTGGCTGCAAGCTTCGGGACCTTGTGCCTTGTATCTTGGTGACATTTGAGAAGGAGCAGATTGTAGTTTGGAGGGGCAAGGACTACCAGCCCTTAGACTCTGGATGTTATCTTACAGTTAGAGAGTCCTTTGATGATATTGATGGTAATATGAATTGTGTCAACGATGATGAGGACGACGATGATGACAACGATGCGGGCTCTCAATCTGGTAATAACGAGTAGTGCCTTGATTGCTCATATCACAAGTAAATCATTCTACCAAAATATCAATATGGCTTTTTAACCTGGAGATTTGACCCATATTCTTTGCCCATATCTTCTATTGCCTTATTCTTATGCTCTTCCATTGAAGAGAGGGGGAGTGAAAATCCTCTATCTAGAGGTTGCATCTAATTTTTTTGTCAAAGGTATATGCCTTAATCTATTAAACTATATCTAAGTTGAGTTGAACTATGTCTAGATTAGCTTGCCAAGAGAATTGTCTAAAGGGAGGAGTATGGATTATTTATTGTAGTGTTTCATTTAGATTGGTTTCTCTCTTTAGAAACAATTAATCAAAATCCACTACAGAATTCTTCTCTTACCTCCAATGACCTTACTTGAATAGATTTGTTCCATAGGTTATACAACTATTCTCGTCTTAACTTGCTTTCTCTCCTCCTTTGTAATACTTGACAAAAGCTAAGGCCTAATGTTGCTCAAGATTGATGACTTTGAGTTTAATTATTGACTCTGA

Coding sequence (CDS)

ATGTTCGTTATCAGAAGACTGTTCCGCCAAAAACCAATTCCGTTTCCTCTTCCTCATACATCTTCCAATCCATGTTTCTTCTACTCCAAACTCCGCGATCACTACGCCTTTGAATCCCCTCCTTCTATCTCCCCATCGCCGGAGCCCAAACCGCGCACAAACAAACCTCCGAAGCCGCGGTACAAACCCCCCTCGTCGCTCGATCTCGCAGACAAGAAGCCAAGGCGTTCAGATTTGCCGTTTGATTTCCAGTACAGTTACACGGAGACTAGCCCCTCGGTGAGGCCTATTGGTCTTCGAGAACCGAAGTATTCGCCATTTGGTCCTGGGCGACTTGATCGTAAATGGACTGGGGTGTGTGCCCCGGCGGTGGACCCGAAGGCGACCTCTGTAGAGGGCATGGAAGATCCAAAACTGGAAGAGAAGAGGAGGGTCATGAGGGAGAATATTCAAGGGGAGCCACTGACAGGAGCCGAGAGAAAGGCCTTGGTGGAGAAGTGTCAAAAGAAGAAAACAAACAGGCAGATTAATATAGGAAGAGATGGTTTGACTCACAATATGTTAAATGATATTTATAATCACTGGAAACATGCCGAAGCAGTGAGGATCAAATGTCTAGGAGTTCCCACTGTTGATATGAAAAACGTGTGCACGCAACTTGAGGTACGACTTTCATTTCATTGGCTGGAGTCGGATAGAAGTTTTAGTTATTCACTATTGAGGTGTGTTCCACAAATTATATTCAACGATAAAACCAATGGAAAGATCATTCATAGGCATGGTGGTTTTCTTGTTCTATACAGAGGGAGAAACTATAATCCCAAGAAAAGGCCATTCATTCCCTTAATGTTATGGAGACCCCATGAACCTATATATCCCAGGCTGATTAAAACTACAATTGATGGACTAAGCATTGATGAGACAAAAGAAATGAGAAAGAAAGGATTAGCTATTCCTGCTTTGACAAAACTTGCAAAGAACGGTTACTATGGTAGTTTGGTACCCATGGTTCGAGATGCTTTTCTCTCCTGCGAGTTGGTTCGGATTGACTGTCAAGGCCTCGAGAAGAGTGATTACAAGAAAATTGGCTGCAAGCTTCGGGACCTTGTGCCTTGTATCTTGGTGACATTTGAGAAGGAGCAGATTGTAGTTTGGAGGGGCAAGGACTACCAGCCCTTAGACTCTGGATGTTATCTTACAGTTAGAGAGTCCTTTGATGATATTGATGGTAATATGAATTGTGTCAACGATGATGAGGACGACGATGATGACAACGATGCGGGCTCTCAATCTGGTAATAACGAGTAG

Protein sequence

MFVIRRLFRQKPIPFPLPHTSSNPCFFYSKLRDHYAFESPPSISPSPEPKPRTNKPPKPRYKPPSSLDLADKKPRRSDLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWTGVCAPAVDPKATSVEGMEDPKLEEKRRVMRENIQGEPLTGAERKALVEKCQKKKTNRQINIGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEVRLSFHWLESDRSFSYSLLRCVPQIIFNDKTNGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAIPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQPLDSGCYLTVRESFDDIDGNMNCVNDDEDDDDDNDAGSQSGNNE

Homology

[Close]

BLAST of Clc05G02620 vs. NCBI nr
Match: XP_038878624.1 (CRS2-associated factor 1, mitochondrial [Benincasa hispida])

HSP 1 Score: 760.4 bits (1962), Expect = 8.6e-216
Identity = 376/435 (86.44%), Postives = 389/435 (89.43%), Query Frame = 0


Query: 1   MFVIRRLFRQKPIPFPLPHTSSNPCFFYSKLRDHYAFESPPSISPSPEPKPRTNKPPKPR 60
           MFVIRRLF Q   PFP PHTS NP FFYSKLRDHYAFESPPSISPSPEPKPR+NKPPKPR
Sbjct: 1   MFVIRRLFLQNASPFPHPHTSPNPRFFYSKLRDHYAFESPPSISPSPEPKPRSNKPPKPR 60

Query: 61  YKPPSSLDLADKKPRRSDLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWTGVC 120
           YKPPSSLDL DKKPRRSDLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWTGVC
Sbjct: 61  YKPPSSLDLVDKKPRRSDLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWTGVC 120

Query: 121 APAVDPKATSVEGMEDPKLEEKRRVMRENIQGEPLTGAERKALVEKCQKKKTNRQINIGR 180
           APAVDPKAT+VEGMEDPKLEEKRRVMRENIQGEPLTGAERKALVE CQKK+T RQIN+GR
Sbjct: 121 APAVDPKATTVEGMEDPKLEEKRRVMRENIQGEPLTGAERKALVETCQKKRTKRQINLGR 180

Query: 181 DGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEVRLSFHWLESDRSFSYSLL 240
           DGLTHNMLNDI+NHW+HAEAVRIKCLGVPTVDMKNVC QLE                   
Sbjct: 181 DGLTHNMLNDIHNHWRHAEAVRIKCLGVPTVDMKNVCMQLE------------------- 240

Query: 241 RCVPQIIFNDKTNGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTI 300
                    DKT+GKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTI
Sbjct: 241 ---------DKTSGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTI 300

Query: 301 DGLSIDETKEMRKKGLAIPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYK 360
           DGLSIDETKEMRKKGLA+PALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCQGLE SDYK
Sbjct: 301 DGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCQGLEISDYK 360

Query: 361 KIGCKLRDLVPCILVTFEKEQIVVWRGKDYQPLDSGCYLTVRESFDDIDGNMNCVNDDED 420
           KIGCKLRDLVPCILVTFEKEQIVVWRGKDYQPLDSGCY++VRESFDD+DGNMNCV+ DED
Sbjct: 361 KIGCKLRDLVPCILVTFEKEQIVVWRGKDYQPLDSGCYISVRESFDDVDGNMNCVDHDED 407

Query: 421 DDDDNDAGSQSGNNE 436
           DDD  D G  SGN+E
Sbjct: 421 DDDYCDGGIHSGNDE 407

[Close]

BLAST of Clc05G02620 vs. NCBI nr
Match: XP_022924354.1 (CRS2-associated factor 1, mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 715.7 bits (1846), Expect = 2.4e-202
Identity = 361/442 (81.67%), Postives = 381/442 (86.20%), Query Frame = 0


Query: 1   MFVIRRLFRQKPIPFPLPHTSSNPCFFYSKLRDHYAFESPPSISPSPEP---KPRTNKPP 60
           MFVI RLFRQ PIPF  PHT SN CF YSKLRDHYAFESPPS+SP P P   KPR NKP 
Sbjct: 1   MFVI-RLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPL 60

Query: 61  KPRYKPPSSLDLADKKPRRSDLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWT 120
           KPRYKPPSSLDLADKKP+ SDLPFDFQYSYTETS SVRPIGLREPK+SPFGPGRLDRKWT
Sbjct: 61  KPRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWT 120

Query: 121 GVCAPAVDPKATSVEGMEDPKLEEKRRVMRENIQGEPLTGAERKALVEKCQKKKTNRQIN 180
           GVCAPAVDPK +S+E  EDPKLEEKRRVM ENIQGEPLTGAERK LVE CQKKKT RQIN
Sbjct: 121 GVCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQIN 180

Query: 181 IGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEVRLSFHWLESDRSFSY 240
           +GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLE                
Sbjct: 181 LGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLE---------------- 240

Query: 241 SLLRCVPQIIFNDKTNGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIK 300
                       +KT GKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEP+YPRLIK
Sbjct: 241 ------------EKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPVYPRLIK 300

Query: 301 TTIDGLSIDETKEMRKKGLAIPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKS 360
           TTIDGLSI+ETKEMRKKGLA+PALT+LAKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKS
Sbjct: 301 TTIDGLSINETKEMRKKGLAVPALTRLAKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKS 360

Query: 361 DYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQPLDSGCYLTVRESFDDIDGNMNCVND 420
           DYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQP +S C+LTVRESFDD+DGN NCV++
Sbjct: 361 DYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQPSESECFLTVRESFDDVDGNTNCVDN 413

Query: 421 DED----DDDDNDAGSQSGNNE 436
           D+D    DD+ +D+G QSGNNE
Sbjct: 421 DDDNQNFDDECSDSGFQSGNNE 413

[Close]

BLAST of Clc05G02620 vs. NCBI nr
Match: XP_022980305.1 (CRS2-associated factor 1, mitochondrial [Cucurbita maxima])

HSP 1 Score: 712.2 bits (1837), Expect = 2.7e-201
Identity = 360/440 (81.82%), Postives = 377/440 (85.68%), Query Frame = 0


Query: 1   MFVIRRLFRQKPIPFPLPHTSSNPCFFYSKLRDHYAFESPPSISPSPEP---KPRTNKPP 60
           MFVI RLFRQ PIPF  PHT SN CF YSKLRDHYAFESPPS+SP P P   KPR NKP 
Sbjct: 1   MFVI-RLFRQDPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPL 60

Query: 61  KPRYKPPSSLDLADKKPRRSDLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWT 120
           KPRYKPPSSLDLADKKP+ SDLPFDFQYSYTETS  VRPIGLREPK+SPFGPGRLDRKWT
Sbjct: 61  KPRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWT 120

Query: 121 GVCAPAVDPKATSVEGMEDPKLEEKRRVMRENIQGEPLTGAERKALVEKCQKKKTNRQIN 180
           GVCAPAVDPKA+S+E MEDPKLEEKRRVM ENIQGEPLTGAERKALVE CQKKKT RQIN
Sbjct: 121 GVCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQKKKTKRQIN 180

Query: 181 IGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEVRLSFHWLESDRSFSY 240
           +GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLE                
Sbjct: 181 LGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLE---------------- 240

Query: 241 SLLRCVPQIIFNDKTNGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIK 300
                       +KT GKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIK
Sbjct: 241 ------------EKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIK 300

Query: 301 TTIDGLSIDETKEMRKKGLAIPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKS 360
           TTIDGLSIDETKEMRKKGLA+PALT+L+KNGYYGSLVPMVRDAFLSCELVRIDCQGLEKS
Sbjct: 301 TTIDGLSIDETKEMRKKGLAVPALTRLSKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKS 360

Query: 361 DYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQPLDSGCYLTVRESFDDIDGNMNCVND 420
           DYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQP +S C+L+VRESFDD DGN  CV+ 
Sbjct: 361 DYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQPSESECFLSVRESFDDFDGNTKCVDS 411

Query: 421 DEDDDDDN------DAGSQS 432
           D+D+DD+N      DAG QS
Sbjct: 421 DDDEDDENFDNNCCDAGFQS 411

[Close]

BLAST of Clc05G02620 vs. NCBI nr
Match: XP_023526250.1 (CRS2-associated factor 1, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 711.4 bits (1835), Expect = 4.6e-201
Identity = 361/442 (81.67%), Postives = 379/442 (85.75%), Query Frame = 0


Query: 1   MFVIRRLFRQKPIPFPLPHTSSNPCFFYSKLRDHYAFESPPSISPSPEP---KPRTNKPP 60
           MFVI RLFRQ PIPF  P T SN CF YSKLRDHYAFESPPS+SP P P   KPR NKP 
Sbjct: 1   MFVI-RLFRQNPIPFAHPPTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPL 60

Query: 61  KPRYKPPSSLDLADKKPRRSDLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWT 120
           KPRYKPPSSLDLADKKP+ SDLPFDFQYSYTETS SVRPIGLREPK+SPFGPGRLDRKWT
Sbjct: 61  KPRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWT 120

Query: 121 GVCAPAVDPKATSVEGMEDPKLEEKRRVMRENIQGEPLTGAERKALVEKCQKKKTNRQIN 180
           GVCAPAVDPK +S+E  EDPKLEEKRRVM ENIQGEPLTGAERK LVE CQKKKT RQIN
Sbjct: 121 GVCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQIN 180

Query: 181 IGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEVRLSFHWLESDRSFSY 240
           +GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLE                
Sbjct: 181 LGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLE---------------- 240

Query: 241 SLLRCVPQIIFNDKTNGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIK 300
                       +KT GKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIK
Sbjct: 241 ------------EKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIK 300

Query: 301 TTIDGLSIDETKEMRKKGLAIPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKS 360
           TTIDGLSI+ETKEMRKKGLA+PALT+LAKNGYYGSLVPMVRDAFL CELVRIDCQGLEKS
Sbjct: 301 TTIDGLSINETKEMRKKGLAVPALTRLAKNGYYGSLVPMVRDAFLCCELVRIDCQGLEKS 360

Query: 361 DYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQPLDSGCYLTVRESFDDIDGNMNCVND 420
           DYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQP +S C+LTVRESFDD+DGN NCV++
Sbjct: 361 DYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQPSESECFLTVRESFDDVDGNTNCVDN 413

Query: 421 DED----DDDDNDAGSQSGNNE 436
           D+D    DD+ +DAG QSGNNE
Sbjct: 421 DDDNENFDDECSDAGFQSGNNE 413

[Close]

BLAST of Clc05G02620 vs. NCBI nr
Match: KAG7018963.1 (CRS2-associated factor 1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 709.5 bits (1830), Expect = 1.7e-200
Identity = 356/438 (81.28%), Postives = 378/438 (86.30%), Query Frame = 0


Query: 1   MFVIRRLFRQKPIPFPLPHTSSNPCFFYSKLRDHYAFESPPSISPSPEP---KPRTNKPP 60
           MFVI RLFRQ PIPF  PHT SN CF YSKLRDHYAFESPPS+SP P P   KPR NKP 
Sbjct: 1   MFVI-RLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPL 60

Query: 61  KPRYKPPSSLDLADKKPRRSDLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWT 120
           KPRYKPPSSLDLADKKP+ SDLPFDFQYSYTETS SVRPIGLREPK+SPFGPGRLDRKWT
Sbjct: 61  KPRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWT 120

Query: 121 GVCAPAVDPKATSVEGMEDPKLEEKRRVMRENIQGEPLTGAERKALVEKCQKKKTNRQIN 180
           GVCAPAV+PK +S+E  EDPKLEEKRRVM ENIQGEPLTGAERKALVE CQ+KKT RQIN
Sbjct: 121 GVCAPAVEPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQRKKTKRQIN 180

Query: 181 IGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEVRLSFHWLESDRSFSY 240
           +GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLE                
Sbjct: 181 LGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLE---------------- 240

Query: 241 SLLRCVPQIIFNDKTNGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIK 300
                       DKT GKIIHRHGGFLVLYRGR YNPKKRPFIPLMLWRPHEP+YPRLIK
Sbjct: 241 ------------DKTFGKIIHRHGGFLVLYRGRKYNPKKRPFIPLMLWRPHEPVYPRLIK 300

Query: 301 TTIDGLSIDETKEMRKKGLAIPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKS 360
           TTIDGLSI+ETKEMRKKGLA+PALT+LAKNGYYGSLVPMVRDAFL CELVRIDCQGLEKS
Sbjct: 301 TTIDGLSINETKEMRKKGLAVPALTRLAKNGYYGSLVPMVRDAFLCCELVRIDCQGLEKS 360

Query: 361 DYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQPLDSGCYLTVRESFDDIDGNMNCVND 420
           DYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDY+P +S C+LTVRESFDD+DGN NCV++
Sbjct: 361 DYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYRPSESECFLTVRESFDDVDGNTNCVDN 409

Query: 421 DEDDDDDNDAGSQSGNNE 436
           +  DD+ +DAG QSGN+E
Sbjct: 421 ENFDDECSDAGFQSGNSE 409

[Close]

BLAST of Clc05G02620 vs. ExPASy Swiss-Prot
Match: Q8VYD9 (CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g31010 PE=2 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 8.3e-145
Identity = 274/434 (63.13%), Postives = 315/434 (72.58%), Query Frame = 0


Query: 1   MFVIRRLFRQKPIPFP-LPHTSSNPCFFYSKLRDHYAFESPPSISPSPEPKPRTN----- 60
           MF+I RL R  P  F  L     +     S+LRD Y F+SPP +S S    P  N     
Sbjct: 1   MFLI-RLSRHNPSSFTLLTRRLHDQTISSSRLRDLYNFQSPPPLSSSASENPDFNQKNNN 60

Query: 61  -KPPKPRYKPPSSLDLADKKPRRSDLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLD 120
            K PKP+Y+PPSSL+    K   SDLPFDF++SYTE+  +VRPIGLREPKYSPFGP RLD
Sbjct: 61  KKKPKPQYRPPSSLE--GVKTVHSDLPFDFRFSYTESCSNVRPIGLREPKYSPFGPDRLD 120

Query: 121 RKWTGVCAPAVDPKATSVEGMEDPKLEEKRRVMRENIQGEPLTGAERKALVEKCQKKKTN 180
           R+WTGVCAPAV+PK  SV+G+EDPKLEEKRR +RE IQG  LT AERK LVE CQ+ KT 
Sbjct: 121 REWTGVCAPAVNPKVESVDGVEDPKLEEKRRKVREKIQGASLTEAERKFLVELCQRNKTK 180

Query: 181 RQINIGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEVRLSFHWLESDR 240
           RQ+N+GRDGLTHNMLND+YNHWKHAEAVR+KCLGVPT+DMKNV   LE            
Sbjct: 181 RQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLE------------ 240

Query: 241 SFSYSLLRCVPQIIFNDKTNGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYP 300
                           DKT G+++ +H G LVLYRGRNY+PKKRP IPLMLW+PHEP+YP
Sbjct: 241 ----------------DKTFGQVVSKHSGTLVLYRGRNYDPKKRPKIPLMLWKPHEPVYP 300

Query: 301 RLIKTTIDGLSIDETKEMRKKGLAIPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCQG 360
           RLIKTTIDGLSIDETK MRKKGLA+PALTKLAKNGYYGSLVPMVRDAFL  ELVRIDC G
Sbjct: 301 RLIKTTIDGLSIDETKAMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLVSELVRIDCLG 360

Query: 361 LEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQPL---DSGCYLTVRESFDDIDG 420
           LE+ DYKKIG KLRDLVPCILVTF+KEQ+V+WRGKDY+P    D       RES  D D 
Sbjct: 361 LERKDYKKIGAKLRDLVPCILVTFDKEQVVIWRGKDYKPPKEDDEYSSFIHRESSIDSDV 403

Query: 421 NMNCVNDDEDDDDD 425
           +++C    +D  D+
Sbjct: 421 DLSCSRGAQDSPDE 403

[Close]

BLAST of Clc05G02620 vs. ExPASy Swiss-Prot
Match: Q6Z4U2 (CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0174900 PE=3 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 1.8e-131
Identity = 238/371 (64.15%), Postives = 276/371 (74.39%), Query Frame = 0


Query: 29  SKLRDHYAFESPPSISP---SPEPKPRTNKPPKPRYKPPSSLDLADKKPRRSDLPFDFQY 88
           S L D Y F  P S++P   S +   +  +P KP Y+PPSSLD   +   RSDLPFDF++
Sbjct: 23  SGLLDRYGFVPPASLTPHSASDDGGAKKRRPKKPPYRPPSSLDRGGRPAARSDLPFDFRF 82

Query: 89  SYTETSPSVRPIGLREPKYSPFGPGRLDRKWTGVCAPAVDPKATSVEGMEDP------KL 148
           SYTE+SP  +PIGLREPKYSPFGPGRLDR WTG+CAPAVD         +DP      +L
Sbjct: 83  SYTESSPGDKPIGLREPKYSPFGPGRLDRPWTGLCAPAVDTTLRDAHA-DDPAPAAEREL 142

Query: 149 EEKRRVMRENIQGEPLTGAERKALVEKCQKKKTNRQINIGRDGLTHNMLNDIYNHWKHAE 208
           EE RR  RE + GEPLT AER  LV KCQK +T +QIN+GRDGLTHNMLNDI+NHWK+ E
Sbjct: 143 EEARRRERERVLGEPLTPAERAFLVSKCQKSRTKKQINLGRDGLTHNMLNDIHNHWKNDE 202

Query: 209 AVRIKCLGVPTVDMKNVCTQLEVRLSFHWLESDRSFSYSLLRCVPQIIFNDKTNGKIIHR 268
           AVR+KCLGVPTVDM+NVC QLE                            DKT G IIHR
Sbjct: 203 AVRVKCLGVPTVDMQNVCHQLE----------------------------DKTGGLIIHR 262

Query: 269 HGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAIP 328
           HGG L+LYRGR+YNPKKRP IPLMLW+P EP+YPRLIKTTI+GL+++ETKEMRKKGL +P
Sbjct: 263 HGGQLILYRGRHYNPKKRPVIPLMLWKPAEPVYPRLIKTTIEGLTVEETKEMRKKGLYVP 322

Query: 329 ALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEK 388
            LTKLAKNGYY SLVPMVRDAFL+ ELVRID +GL KSDY+KIG KLRDLVPCI+V+F+K
Sbjct: 323 VLTKLAKNGYYASLVPMVRDAFLTDELVRIDSKGLPKSDYRKIGVKLRDLVPCIIVSFDK 364

Query: 389 EQIVVWRGKDY 391
           EQI+VWRGKDY
Sbjct: 383 EQIIVWRGKDY 364

[Close]

BLAST of Clc05G02620 vs. ExPASy Swiss-Prot
Match: Q9FFU1 (CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g54890 PE=2 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.2e-87
Identity = 175/352 (49.72%), Postives = 226/352 (64.20%), Query Frame = 0


Query: 41  PSISPSPEP-KPRTNKPPKPRYKPPSSLDLAD--KKPRRSDLPFDFQYSYTETSPSVRPI 100
           P  SP  +P KP   K  +   K   S +L +  K P  SDLPFDF+YSY+ET+P + PI
Sbjct: 36  PPFSPLSKPTKPPKEKKKQKTKKQDQSSELVNDLKIPVISDLPFDFRYSYSETNPEIEPI 95

Query: 101 GLREPK-YSPFGPGRLDRKWTGVCAPAVDPKATSVEGMEDPKLEEKRRVMRENIQGEPLT 160
           G REPK +SPFGPGRLDRKWTG  A A      S E  +   +EE+ RV+     GE LT
Sbjct: 96  GFREPKRFSPFGPGRLDRKWTGTTALA------SPEIDQSQWVEERARVL-----GETLT 155

Query: 161 GAERKALVEKCQKKKTNRQINIGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNV 220
             E   L+E+ +     RQIN+G+ G+THNM++DI+NHWK AEAVRIKCLGVPT+DM N+
Sbjct: 156 EDEVTELIERYRHSDCTRQINLGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDMDNI 215

Query: 221 CTQLEVRLSFHWLESDRSFSYSLLRCVPQIIFNDKTNGKIIHRHGGFLVLYRGRNYNPKK 280
           C  LE                            +K+ GKI++R+   LVLYRGRNY+PK 
Sbjct: 216 CFHLE----------------------------EKSGGKIVYRNINILVLYRGRNYDPKS 275

Query: 281 RPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAIPALTKLAKNGYYGSLVPM 340
           RP IPLMLW+PH PIYPRL+K   DGL  +ETKEMR +GL  PAL KL +NG Y ++V  
Sbjct: 276 RPIIPLMLWKPHPPIYPRLVKNVADGLEFEETKEMRNRGLHSPALMKLTRNGVYVNVVGR 335

Query: 341 VRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGK 389
           VR+ F + E+VR+DC  +  SD K+IG KL+++VPC+ + F+ EQI++WRGK
Sbjct: 336 VREEFETEEIVRLDCTHVGMSDCKRIGVKLKEMVPCVPILFKDEQIILWRGK 348

[Close]

BLAST of Clc05G02620 vs. ExPASy Swiss-Prot
Match: Q0J7J7 (CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0188000 PE=2 SV=2)

HSP 1 Score: 316.6 bits (810), Expect = 4.3e-85
Identity = 167/359 (46.52%), Postives = 217/359 (60.45%), Query Frame = 0


Query: 39  SPPSISPSPEP--------KPRTNKPPKPRYKPPSSLDLADKKPRRSDLPFDFQYSYTET 98
           +PP   P  +P         PR     K + +      +   +P  SDLPFDF+YSY+ET
Sbjct: 31  APPFSDPDDDPPFTRLAERPPRAPSKKKKKEEEDQGGRIRPPEPASSDLPFDFRYSYSET 90

Query: 99  SPSVRPIGLREP-KYSPFGPGRLDRKWTGVCAPAVDPKATSVEGMEDPKLEEKRRVMREN 158
            P+ RPIG REP ++SPFGPGRLDR W GV A A   +                   RE 
Sbjct: 91  DPAWRPIGFREPTRFSPFGPGRLDRPWDGVAAAAARGEGAGAAA-----------TSREE 150

Query: 159 IQGEPLTGAERKALVEKCQKKKTNRQINIGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVP 218
           + GEPL   E   LVE+ +    +RQIN+G+ G+THNM++DI+NHWK AEAVRIKCLGVP
Sbjct: 151 VLGEPLAEEEVAQLVERYRHSDCSRQINLGKGGVTHNMIDDIHNHWKRAEAVRIKCLGVP 210

Query: 219 TVDMKNVCTQLEVRLSFHWLESDRSFSYSLLRCVPQIIFNDKTNGKIIHRHGGFLVLYRG 278
           T+DM N+C  LE                            DKT GK+I+R+   L+LYRG
Sbjct: 211 TLDMDNICFHLE----------------------------DKTGGKVIYRNINILILYRG 270

Query: 279 RNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAIPALTKLAKNGY 338
           RNY+PK+RP IPLMLW+P  PIYPRL++   DGL+ ++TKE+R  GL    L KL +NG 
Sbjct: 271 RNYDPKQRPQIPLMLWKPLAPIYPRLVQNVADGLTFEKTKELRNTGLNSSPLMKLTRNGV 330

Query: 339 YGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGK 389
           Y ++V  VR+AF + E+VR+DC  +  SD KKIG KLRDLVPC+ + F+ EQI++WRGK
Sbjct: 331 YVNVVDRVREAFKTVEVVRLDCSHVGSSDCKKIGVKLRDLVPCVPLLFKDEQIILWRGK 350

[Close]

BLAST of Clc05G02620 vs. ExPASy Swiss-Prot
Match: Q84N49 (CRS2-associated factor 1, chloroplastic OS=Zea mays OX=4577 GN=CAF1 PE=1 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 3.3e-77
Identity = 161/362 (44.48%), Postives = 206/362 (56.91%), Query Frame = 0


Query: 75  RRSDLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWTG---------------- 134
           R    PF+FQYSYTE +P  RP+ LRE  + PFGP    R WTG                
Sbjct: 86  RLDGAPFEFQYSYTE-APRARPVALREAPFMPFGPEATPRPWTGRKPLPKSRKELPEFDS 145

Query: 135 VCAPAVDPKATSVEGMEDPKL----EEKRRVMRENIQGEPLTGAERKALVEKCQKKKTNR 194
              PA   K         P L       + V RE+I GEPLT  E   LV+   K K  R
Sbjct: 146 FVLPAPGKKGVKPVQSPGPFLAGMEPRYQSVSREDILGEPLTKEEVSELVKGSLKSK--R 205

Query: 195 QINIGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEVRLSFHWLESDRS 254
           Q+N+GRDGLTHNML +I++HWK     +IKC GV T+DM N+C QLE             
Sbjct: 206 QLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTIDMDNICHQLE------------- 265

Query: 255 FSYSLLRCVPQIIFNDKTNGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPR 314
                          +K  GK+IHR GG + L+RGRNYN + RP  PLMLW+P  P+YPR
Sbjct: 266 ---------------EKVGGKVIHRQGGVIFLFRGRNYNYRTRPCFPLMLWKPVAPVYPR 325

Query: 315 LIKTTIDGLSIDETKEMRKKGLAIPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCQGL 374
           L+     GL+ DE  EMR +G  +P + KL KNG Y +LV  VR+AF +C+LVR+DC GL
Sbjct: 326 LVTKVPGGLTPDEATEMRTRGHQLPPICKLGKNGVYANLVNQVREAFEACDLVRVDCSGL 385

Query: 375 EKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQ----PLDSGCYLT-VRESFDDID 412
            KSD +KIG KL+DLVPCIL++FE E I++WRG D++    PL++   +T V+ESF   +
Sbjct: 386 NKSDCRKIGAKLKDLVPCILLSFEFEHILMWRGSDWKSSLPPLENSYEVTKVQESFSGKE 416

[Close]

BLAST of Clc05G02620 vs. ExPASy TrEMBL
Match: A0A6J1E8W9 (CRS2-associated factor 1, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431873 PE=4 SV=1)

HSP 1 Score: 715.7 bits (1846), Expect = 1.2e-202
Identity = 361/442 (81.67%), Postives = 381/442 (86.20%), Query Frame = 0


Query: 1   MFVIRRLFRQKPIPFPLPHTSSNPCFFYSKLRDHYAFESPPSISPSPEP---KPRTNKPP 60
           MFVI RLFRQ PIPF  PHT SN CF YSKLRDHYAFESPPS+SP P P   KPR NKP 
Sbjct: 1   MFVI-RLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPL 60

Query: 61  KPRYKPPSSLDLADKKPRRSDLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWT 120
           KPRYKPPSSLDLADKKP+ SDLPFDFQYSYTETS SVRPIGLREPK+SPFGPGRLDRKWT
Sbjct: 61  KPRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWT 120

Query: 121 GVCAPAVDPKATSVEGMEDPKLEEKRRVMRENIQGEPLTGAERKALVEKCQKKKTNRQIN 180
           GVCAPAVDPK +S+E  EDPKLEEKRRVM ENIQGEPLTGAERK LVE CQKKKT RQIN
Sbjct: 121 GVCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQIN 180

Query: 181 IGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEVRLSFHWLESDRSFSY 240
           +GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLE                
Sbjct: 181 LGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLE---------------- 240

Query: 241 SLLRCVPQIIFNDKTNGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIK 300
                       +KT GKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEP+YPRLIK
Sbjct: 241 ------------EKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPVYPRLIK 300

Query: 301 TTIDGLSIDETKEMRKKGLAIPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKS 360
           TTIDGLSI+ETKEMRKKGLA+PALT+LAKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKS
Sbjct: 301 TTIDGLSINETKEMRKKGLAVPALTRLAKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKS 360

Query: 361 DYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQPLDSGCYLTVRESFDDIDGNMNCVND 420
           DYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQP +S C+LTVRESFDD+DGN NCV++
Sbjct: 361 DYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQPSESECFLTVRESFDDVDGNTNCVDN 413

Query: 421 DED----DDDDNDAGSQSGNNE 436
           D+D    DD+ +D+G QSGNNE
Sbjct: 421 DDDNQNFDDECSDSGFQSGNNE 413

[Close]

BLAST of Clc05G02620 vs. ExPASy TrEMBL
Match: A0A6J1IVX0 (CRS2-associated factor 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111479719 PE=4 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 1.3e-201
Identity = 360/440 (81.82%), Postives = 377/440 (85.68%), Query Frame = 0


Query: 1   MFVIRRLFRQKPIPFPLPHTSSNPCFFYSKLRDHYAFESPPSISPSPEP---KPRTNKPP 60
           MFVI RLFRQ PIPF  PHT SN CF YSKLRDHYAFESPPS+SP P P   KPR NKP 
Sbjct: 1   MFVI-RLFRQDPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPL 60

Query: 61  KPRYKPPSSLDLADKKPRRSDLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWT 120
           KPRYKPPSSLDLADKKP+ SDLPFDFQYSYTETS  VRPIGLREPK+SPFGPGRLDRKWT
Sbjct: 61  KPRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWT 120

Query: 121 GVCAPAVDPKATSVEGMEDPKLEEKRRVMRENIQGEPLTGAERKALVEKCQKKKTNRQIN 180
           GVCAPAVDPKA+S+E MEDPKLEEKRRVM ENIQGEPLTGAERKALVE CQKKKT RQIN
Sbjct: 121 GVCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQKKKTKRQIN 180

Query: 181 IGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEVRLSFHWLESDRSFSY 240
           +GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLE                
Sbjct: 181 LGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLE---------------- 240

Query: 241 SLLRCVPQIIFNDKTNGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIK 300
                       +KT GKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIK
Sbjct: 241 ------------EKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIK 300

Query: 301 TTIDGLSIDETKEMRKKGLAIPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKS 360
           TTIDGLSIDETKEMRKKGLA+PALT+L+KNGYYGSLVPMVRDAFLSCELVRIDCQGLEKS
Sbjct: 301 TTIDGLSIDETKEMRKKGLAVPALTRLSKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKS 360

Query: 361 DYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQPLDSGCYLTVRESFDDIDGNMNCVND 420
           DYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQP +S C+L+VRESFDD DGN  CV+ 
Sbjct: 361 DYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQPSESECFLSVRESFDDFDGNTKCVDS 411

Query: 421 DEDDDDDN------DAGSQS 432
           D+D+DD+N      DAG QS
Sbjct: 421 DDDEDDENFDNNCCDAGFQS 411

[Close]

BLAST of Clc05G02620 vs. ExPASy TrEMBL
Match: A0A6J1D1H4 (CRS2-associated factor 1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111016410 PE=4 SV=1)

HSP 1 Score: 708.4 bits (1827), Expect = 1.9e-200
Identity = 363/440 (82.50%), Postives = 378/440 (85.91%), Query Frame = 0


Query: 1   MFVIRRLFRQKPIPFPLPHTSSNPCFFYSKLRDHYAFESPPSIS---PSPEPKPRTNKPP 60
           MFVI RL RQKPI F  P TS N CF YSKLRDHYAFESPPS+S   P+PEPKPR NKPP
Sbjct: 1   MFVI-RLLRQKPILFAPPLTSFNRCFCYSKLRDHYAFESPPSLSPKPPAPEPKPRPNKPP 60

Query: 61  KPRYKPPSSLDLADKKPRRSDLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWT 120
           K RYKPPSSLDLADKKPR SDLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKW+
Sbjct: 61  KQRYKPPSSLDLADKKPRHSDLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWS 120

Query: 121 GVCAPAVDPKATSVEGMEDPKLEEKRRVMRENIQGEPLTGAERKALVEKCQKKKTNRQIN 180
           GVCAPAVDPKA+SVEGMEDPKLEEKRR MRENIQGEPLTGAERKALVEKCQKKKT RQIN
Sbjct: 121 GVCAPAVDPKASSVEGMEDPKLEEKRRFMRENIQGEPLTGAERKALVEKCQKKKTKRQIN 180

Query: 181 IGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEVRLSFHWLESDRSFSY 240
           +GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLE                
Sbjct: 181 LGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLE---------------- 240

Query: 241 SLLRCVPQIIFNDKTNGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIK 300
                       DKT GKIIHRHGGFLVLYRGRNY  KKRPFIPLMLWRPHEPIYPRLIK
Sbjct: 241 ------------DKTFGKIIHRHGGFLVLYRGRNYITKKRPFIPLMLWRPHEPIYPRLIK 300

Query: 301 TTIDGLSIDETKEMRKKGLAIPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKS 360
           TTIDGLSI+ETKEMRKKGLA+PALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKS
Sbjct: 301 TTIDGLSIEETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKS 360

Query: 361 DYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQPLDSGCYLTVRESFDD--IDGNMNCV 420
           DYKKIGCKLRDLVPCILVTFEKEQIVVWRG DY+PLDSGC+LTVR SFDD   +GN N V
Sbjct: 361 DYKKIGCKLRDLVPCILVTFEKEQIVVWRGNDYKPLDSGCFLTVRGSFDDDEANGNTNRV 411

Query: 421 NDDEDDDDDNDAGSQSGNNE 436
            +D+DDDD +D  S   N++
Sbjct: 421 GEDDDDDDFDDDYSDGANDQ 411

[Close]

BLAST of Clc05G02620 vs. ExPASy TrEMBL
Match: A0A5D3D3D7 (CRS2-associated factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004260 PE=4 SV=1)

HSP 1 Score: 708.0 bits (1826), Expect = 2.5e-200
Identity = 351/418 (83.97%), Postives = 368/418 (88.04%), Query Frame = 0


Query: 1   MFVIRRLFRQKPIPFPLPHTSSNPCFFYSKLRDHYAFESPPSISPS-PEPKPRTNKPPKP 60
           MFVIR + R+K I  P PHTS NPC FYSKLR+ YAFE P S+SPS PEPKPR+NKPPKP
Sbjct: 1   MFVIRTISREKSI--PRPHTSFNPCSFYSKLRELYAFEFPSSVSPSPPEPKPRSNKPPKP 60

Query: 61  RYKPPSSLDLADKKPRRSDLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWTGV 120
           RYKPPSSLDL DKKPRRS+LPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWTGV
Sbjct: 61  RYKPPSSLDLGDKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWTGV 120

Query: 121 CAPAVDPKATSVEGMEDPKLEEKRRVMRENIQGEPLTGAERKALVEKCQKKKTNRQINIG 180
           CAPAVDPKATSVEGMEDP+LEEKRRVMREN+QGEPLTGAERKALVEKCQK KT RQIN+G
Sbjct: 121 CAPAVDPKATSVEGMEDPRLEEKRRVMRENLQGEPLTGAERKALVEKCQKNKTKRQINLG 180

Query: 181 RDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEVRLSFHWLESDRSFSYSL 240
           RDGLTHNMLNDI+NHWKH EAVRIKCLGVPTVDMKNVCTQLE                  
Sbjct: 181 RDGLTHNMLNDIHNHWKHGEAVRIKCLGVPTVDMKNVCTQLE------------------ 240

Query: 241 LRCVPQIIFNDKTNGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTT 300
                     DKT GKIIHRHGG LVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTT
Sbjct: 241 ----------DKTFGKIIHRHGGLLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTT 300

Query: 301 IDGLSIDETKEMRKKGLAIPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDY 360
           IDGLSIDETKEMRKKGLA+PALTKLAKNGYYGSLVPMVRDAFLSCELVRIDC+GLE+SDY
Sbjct: 301 IDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCKGLERSDY 360

Query: 361 KKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQPLDSGCYLTVRESFDDIDGNMNCVND 418
           KKIGCKLRDLVPCILVTF+KEQIVVWRGKDYQPLD G YLTVRE+FDD+DGN  CV+D
Sbjct: 361 KKIGCKLRDLVPCILVTFDKEQIVVWRGKDYQPLDIG-YLTVRETFDDVDGNTGCVDD 387

[Close]

BLAST of Clc05G02620 vs. ExPASy TrEMBL
Match: A0A5A7U1B5 (CRS2-associated factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G002320 PE=4 SV=1)

HSP 1 Score: 707.6 bits (1825), Expect = 3.2e-200
Identity = 350/418 (83.73%), Postives = 368/418 (88.04%), Query Frame = 0


Query: 1   MFVIRRLFRQKPIPFPLPHTSSNPCFFYSKLRDHYAFESPPSISPS-PEPKPRTNKPPKP 60
           MFVIR + R+K I  P PHTS NPC FYSKLR+ YAFE P S+SPS PEPKPR+NKPPKP
Sbjct: 1   MFVIRTISREKSI--PRPHTSFNPCSFYSKLRELYAFEFPSSVSPSPPEPKPRSNKPPKP 60

Query: 61  RYKPPSSLDLADKKPRRSDLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWTGV 120
           RYKPPSSLDL DKKPRRS+LPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWTGV
Sbjct: 61  RYKPPSSLDLGDKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWTGV 120

Query: 121 CAPAVDPKATSVEGMEDPKLEEKRRVMRENIQGEPLTGAERKALVEKCQKKKTNRQINIG 180
           CAPAVDPKATSVEGMEDP+LEEKRRVMREN+QGEPLTGAERKALVEKCQK KT RQIN+G
Sbjct: 121 CAPAVDPKATSVEGMEDPRLEEKRRVMRENLQGEPLTGAERKALVEKCQKNKTKRQINLG 180

Query: 181 RDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEVRLSFHWLESDRSFSYSL 240
           RDGLTHNMLNDI+NHWKH EAVRIKCLGVPTVDMKNVCTQLE                  
Sbjct: 181 RDGLTHNMLNDIHNHWKHGEAVRIKCLGVPTVDMKNVCTQLE------------------ 240

Query: 241 LRCVPQIIFNDKTNGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTT 300
                     DKT GKIIHRHGG LVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTT
Sbjct: 241 ----------DKTFGKIIHRHGGLLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTT 300

Query: 301 IDGLSIDETKEMRKKGLAIPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDY 360
           IDGLSIDETKEMRKKGLA+PALTKLAKNGYYGSL+PMVRDAFLSCELVRIDC+GLE+SDY
Sbjct: 301 IDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLIPMVRDAFLSCELVRIDCKGLERSDY 360

Query: 361 KKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQPLDSGCYLTVRESFDDIDGNMNCVND 418
           KKIGCKLRDLVPCILVTF+KEQIVVWRGKDYQPLD G YLTVRE+FDD+DGN  CV+D
Sbjct: 361 KKIGCKLRDLVPCILVTFDKEQIVVWRGKDYQPLDIG-YLTVRETFDDVDGNTGCVDD 387

[Close]

BLAST of Clc05G02620 vs. TAIR 10
Match: AT4G31010.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 515.0 bits (1325), Expect = 5.9e-146
Identity = 274/434 (63.13%), Postives = 315/434 (72.58%), Query Frame = 0


Query: 1   MFVIRRLFRQKPIPFP-LPHTSSNPCFFYSKLRDHYAFESPPSISPSPEPKPRTN----- 60
           MF+I RL R  P  F  L     +     S+LRD Y F+SPP +S S    P  N     
Sbjct: 1   MFLI-RLSRHNPSSFTLLTRRLHDQTISSSRLRDLYNFQSPPPLSSSASENPDFNQKNNN 60

Query: 61  -KPPKPRYKPPSSLDLADKKPRRSDLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLD 120
            K PKP+Y+PPSSL+    K   SDLPFDF++SYTE+  +VRPIGLREPKYSPFGP RLD
Sbjct: 61  KKKPKPQYRPPSSLE--GVKTVHSDLPFDFRFSYTESCSNVRPIGLREPKYSPFGPDRLD 120

Query: 121 RKWTGVCAPAVDPKATSVEGMEDPKLEEKRRVMRENIQGEPLTGAERKALVEKCQKKKTN 180
           R+WTGVCAPAV+PK  SV+G+EDPKLEEKRR +RE IQG  LT AERK LVE CQ+ KT 
Sbjct: 121 REWTGVCAPAVNPKVESVDGVEDPKLEEKRRKVREKIQGASLTEAERKFLVELCQRNKTK 180

Query: 181 RQINIGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEVRLSFHWLESDR 240
           RQ+N+GRDGLTHNMLND+YNHWKHAEAVR+KCLGVPT+DMKNV   LE            
Sbjct: 181 RQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLE------------ 240

Query: 241 SFSYSLLRCVPQIIFNDKTNGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYP 300
                           DKT G+++ +H G LVLYRGRNY+PKKRP IPLMLW+PHEP+YP
Sbjct: 241 ----------------DKTFGQVVSKHSGTLVLYRGRNYDPKKRPKIPLMLWKPHEPVYP 300

Query: 301 RLIKTTIDGLSIDETKEMRKKGLAIPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCQG 360
           RLIKTTIDGLSIDETK MRKKGLA+PALTKLAKNGYYGSLVPMVRDAFL  ELVRIDC G
Sbjct: 301 RLIKTTIDGLSIDETKAMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLVSELVRIDCLG 360

Query: 361 LEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQPL---DSGCYLTVRESFDDIDG 420
           LE+ DYKKIG KLRDLVPCILVTF+KEQ+V+WRGKDY+P    D       RES  D D 
Sbjct: 361 LERKDYKKIGAKLRDLVPCILVTFDKEQVVIWRGKDYKPPKEDDEYSSFIHRESSIDSDV 403

Query: 421 NMNCVNDDEDDDDD 425
           +++C    +D  D+
Sbjct: 421 DLSCSRGAQDSPDE 403

[Close]

BLAST of Clc05G02620 vs. TAIR 10
Match: AT4G31010.2 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 389.4 bits (999), Expect = 3.7e-108
Identity = 207/331 (62.54%), Postives = 238/331 (71.90%), Query Frame = 0


Query: 1   MFVIRRLFRQKPIPFP-LPHTSSNPCFFYSKLRDHYAFESPPSISPSPEPKPRTN----- 60
           MF+I RL R  P  F  L     +     S+LRD Y F+SPP +S S    P  N     
Sbjct: 1   MFLI-RLSRHNPSSFTLLTRRLHDQTISSSRLRDLYNFQSPPPLSSSASENPDFNQKNNN 60

Query: 61  -KPPKPRYKPPSSLDLADKKPRRSDLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLD 120
            K PKP+Y+PPSSL+    K   SDLPFDF++SYTE+  +VRPIGLREPKYSPFGP RLD
Sbjct: 61  KKKPKPQYRPPSSLE--GVKTVHSDLPFDFRFSYTESCSNVRPIGLREPKYSPFGPDRLD 120

Query: 121 RKWTGVCAPAVDPKATSVEGMEDPKLEEKRRVMRENIQGEPLTGAERKALVEKCQKKKTN 180
           R+WTGVCAPAV+PK  SV+G+EDPKLEEKRR +RE IQG  LT AERK LVE CQ+ KT 
Sbjct: 121 REWTGVCAPAVNPKVESVDGVEDPKLEEKRRKVREKIQGASLTEAERKFLVELCQRNKTK 180

Query: 181 RQINIGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEVRLSFHWLESDR 240
           RQ+N+GRDGLTHNMLND+YNHWKHAEAVR+KCLGVPT+DMKNV   LE            
Sbjct: 181 RQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLE------------ 240

Query: 241 SFSYSLLRCVPQIIFNDKTNGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYP 300
                           DKT G+++ +H G LVLYRGRNY+PKKRP IPLMLW+PHEP+YP
Sbjct: 241 ----------------DKTFGQVVSKHSGTLVLYRGRNYDPKKRPKIPLMLWKPHEPVYP 300

Query: 301 RLIKTTIDGLSIDETKEMRKKGLAIPALTKL 325
           RLIKTTIDGLSIDETK MRKKGLA+PALTKL
Sbjct: 301 RLIKTTIDGLSIDETKAMRKKGLAVPALTKL 300

[Close]

BLAST of Clc05G02620 vs. TAIR 10
Match: AT5G54890.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 325.1 bits (832), Expect = 8.6e-89
Identity = 175/352 (49.72%), Postives = 226/352 (64.20%), Query Frame = 0


Query: 41  PSISPSPEP-KPRTNKPPKPRYKPPSSLDLAD--KKPRRSDLPFDFQYSYTETSPSVRPI 100
           P  SP  +P KP   K  +   K   S +L +  K P  SDLPFDF+YSY+ET+P + PI
Sbjct: 36  PPFSPLSKPTKPPKEKKKQKTKKQDQSSELVNDLKIPVISDLPFDFRYSYSETNPEIEPI 95

Query: 101 GLREPK-YSPFGPGRLDRKWTGVCAPAVDPKATSVEGMEDPKLEEKRRVMRENIQGEPLT 160
           G REPK +SPFGPGRLDRKWTG  A A      S E  +   +EE+ RV+     GE LT
Sbjct: 96  GFREPKRFSPFGPGRLDRKWTGTTALA------SPEIDQSQWVEERARVL-----GETLT 155

Query: 161 GAERKALVEKCQKKKTNRQINIGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNV 220
             E   L+E+ +     RQIN+G+ G+THNM++DI+NHWK AEAVRIKCLGVPT+DM N+
Sbjct: 156 EDEVTELIERYRHSDCTRQINLGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDMDNI 215

Query: 221 CTQLEVRLSFHWLESDRSFSYSLLRCVPQIIFNDKTNGKIIHRHGGFLVLYRGRNYNPKK 280
           C  LE                            +K+ GKI++R+   LVLYRGRNY+PK 
Sbjct: 216 CFHLE----------------------------EKSGGKIVYRNINILVLYRGRNYDPKS 275

Query: 281 RPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAIPALTKLAKNGYYGSLVPM 340
           RP IPLMLW+PH PIYPRL+K   DGL  +ETKEMR +GL  PAL KL +NG Y ++V  
Sbjct: 276 RPIIPLMLWKPHPPIYPRLVKNVADGLEFEETKEMRNRGLHSPALMKLTRNGVYVNVVGR 335

Query: 341 VRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGK 389
           VR+ F + E+VR+DC  +  SD K+IG KL+++VPC+ + F+ EQI++WRGK
Sbjct: 336 VREEFETEEIVRLDCTHVGMSDCKRIGVKLKEMVPCVPILFKDEQIILWRGK 348

[Close]

BLAST of Clc05G02620 vs. TAIR 10
Match: AT2G20020.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 278.5 bits (711), Expect = 9.3e-75
Identity = 175/423 (41.37%), Postives = 232/423 (54.85%), Query Frame = 0


Query: 37  FESPPSISPSPEPKPRT-NKPPKPRYKPPSSLDLADKKPRRSDLPFDFQYSYTETSPSVR 96
           +  P S    P+ KPR  + PP+   KP   L         +  PF+F+YSYTET P V+
Sbjct: 106 YSKPDSGPNRPKNKPRVPDSPPQLDAKPEVKLSEDGLTYVINGAPFEFKYSYTET-PKVK 165

Query: 97  PIGLREPKYSPFGPGRLDRKWTGVCAPAVDPKATSVE--------------------GME 156
           P+ LREP Y+PFGP  + R WTG  AP    + T  E                    G  
Sbjct: 166 PLKLREPAYAPFGPTTMGRPWTG-RAPLPQSQKTPREFDSFRLPPVGKKGLKPVQKPGPF 225

Query: 157 DPKLEEKRRVMRENIQGEPLTGAERKALVEKCQKKKTNRQINIGRDGLTHNMLNDIYNHW 216
            P +  +    +E I GEPLT  E + LV  C   KT RQ+N+GRDGLTHNMLN+I++ W
Sbjct: 226 RPGVGPRYVYSKEEILGEPLTKEEVRELVTSC--LKTTRQLNMGRDGLTHNMLNNIHDLW 285

Query: 217 KHAEAVRIKCLGVPTVDMKNVCTQLEVRLSFHWLESDRSFSYSLLRCVPQIIFNDKTNGK 276
           K     +IKC GV TVDM NVC QLE                            +K  GK
Sbjct: 286 KRRRVCKIKCKGVCTVDMDNVCEQLE----------------------------EKIGGK 345

Query: 277 IIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKG 336
           +I+R GG L L+RGRNYN + RP  PLMLW+P  P+YPRLI+   +GL+  E   MR+KG
Sbjct: 346 VIYRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTRQEATNMRRKG 405

Query: 337 LAIPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILV 396
             +  + KL KNG Y  LV  V++AF  CELVRIDCQG++ SD++KIG KL+DLVPC+LV
Sbjct: 406 RELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLV 465

Query: 397 TFEKEQIVVWRGKDYQ-----PLDSGCYLTVRESFDDIDGNMNCVNDDEDDDDDNDAGSQ 434
           +FE EQI++WRG++++     P   G      +  +DI+ +     DDE     N + + 
Sbjct: 466 SFENEQILIWRGREWKSSLTTPDKKG------DILEDIEVDTALPEDDEPSVSPNQSQTM 490

[Close]

BLAST of Clc05G02620 vs. TAIR 10
Match: AT1G23400.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 274.6 bits (701), Expect = 1.3e-73
Identity = 144/331 (43.50%), Postives = 194/331 (58.61%), Query Frame = 0


Query: 80  PFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWTGVC--------APAVDPKATSV 139
           PF+FQ+SY+ET P V+P+G+REP + PF P  + R WTG           P  D      
Sbjct: 110 PFEFQFSYSET-PKVKPVGIREPAFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPP 169

Query: 140 EGMEDPKLEE-----------KRRVMRENIQGEPLTGAERKALVEKCQKKKTNRQINIGR 199
            G    K  E           K  + RE + GEPL   E+  L++       NRQ+N+GR
Sbjct: 170 AGKSGVKYVEMPGPLPFGRYPKEGMNREEVLGEPLKRWEKGMLIK--PHMHDNRQVNLGR 229

Query: 200 DGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEVRLSFHWLESDRSFSYSLL 259
           DG THNML  I++HWK     +++C GVPTVDM NVC  LE                   
Sbjct: 230 DGFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMNNVCRVLE------------------- 289

Query: 260 RCVPQIIFNDKTNGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTI 319
                    +KT G+IIHR GG + L+RGRNYN + RP  PLMLW+P  P+YP+LI+   
Sbjct: 290 ---------EKTGGEIIHRVGGVVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEVP 349

Query: 320 DGLSIDETKEMRKKGLAIPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYK 379
           +GL+ +E  E R KG ++  + KL+KNG Y SLV  VRDAF    LV++DC GLE SDYK
Sbjct: 350 EGLTKEEAHEFRVKGKSLRPICKLSKNGVYVSLVKDVRDAFELSSLVKVDCPGLEPSDYK 409

Query: 380 KIGCKLRDLVPCILVTFEKEQIVVWRGKDYQ 392
           KIG KL++LVPC+L++F+ EQI++WRG++++
Sbjct: 410 KIGAKLKELVPCVLLSFDDEQILMWRGREWK 409

The following BLAST results are available for this feature:

BLAST of Clc05G02620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878624.1	8.6e-216	86.44	CRS2-associated factor 1, mitochondrial [Benincasa hispida]	[more]
XP_022924354.1	2.4e-202	81.67	CRS2-associated factor 1, mitochondrial isoform X1 [Cucurbita moschata]	[more]
XP_022980305.1	2.7e-201	81.82	CRS2-associated factor 1, mitochondrial [Cucurbita maxima]	[more]
XP_023526250.1	4.6e-201	81.67	CRS2-associated factor 1, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
KAG7018963.1	1.7e-200	81.28	CRS2-associated factor 1, mitochondrial [Cucurbita argyrosperma subsp. argyrospe...	[more]

BLAST of Clc05G02620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYD9	8.3e-145	63.13	CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g3...	[more]
Q6Z4U2	1.8e-131	64.15	CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947...	[more]
Q9FFU1	1.2e-87	49.72	CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g5...	[more]
Q0J7J7	4.3e-85	46.52	CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947...	[more]
Q84N49	3.3e-77	44.48	CRS2-associated factor 1, chloroplastic OS=Zea mays OX=4577 GN=CAF1 PE=1 SV=1	[more]

BLAST of Clc05G02620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E8W9	1.2e-202	81.67	CRS2-associated factor 1, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1IVX0	1.3e-201	81.82	CRS2-associated factor 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111479...	[more]
A0A6J1D1H4	1.9e-200	82.50	CRS2-associated factor 1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A5D3D3D7	2.5e-200	83.97	CRS2-associated factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7U1B5	3.2e-200	83.73	CRS2-associated factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of Clc05G02620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31010.1	5.9e-146	63.13	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]
AT4G31010.2	3.7e-108	62.54	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]
AT5G54890.1	8.6e-89	49.72	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]
AT2G20020.1	9.3e-75	41.37	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]
AT1G23400.1	1.3e-73	43.50	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001890	RNA-binding, CRM domain	SMART	SM01103	CRS1_YhbY_2	coord: 303..386 e-value: 1.6E-11 score: 54.3 coord: 155..268 e-value: 6.1E-16 score: 68.9
IPR001890	RNA-binding, CRM domain	PFAM	PF01985	CRS1_YhbY	coord: 306..386 e-value: 1.1E-9 score: 38.3 coord: 155..268 e-value: 1.5E-18 score: 66.7
IPR001890	RNA-binding, CRM domain	PROSITE	PS51295	CRM	coord: 153..279 score: 15.893344
IPR001890	RNA-binding, CRM domain	PROSITE	PS51295	CRM	coord: 301..397 score: 16.427395
IPR035920	YhbY-like superfamily	GENE3D	3.30.110.60		coord: 154..235 e-value: 2.3E-14 score: 55.1
IPR035920	YhbY-like superfamily	GENE3D	3.30.110.60		coord: 303..395 e-value: 3.1E-12 score: 48.4
IPR035920	YhbY-like superfamily	SUPERFAMILY	75471	YhbY-like	coord: 303..392
IPR035920	YhbY-like superfamily	SUPERFAMILY	75471	YhbY-like	coord: 154..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 412..428
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 412..435
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..79
None	No IPR available	PANTHER	PTHR46247:SF2	CRS2-ASSOCIATED FACTOR 1, MITOCHONDRIAL	coord: 20..221
None	No IPR available	PANTHER	PTHR46247:SF2	CRS2-ASSOCIATED FACTOR 1, MITOCHONDRIAL	coord: 249..424
IPR044599	CRS2-associated factor, plant	PANTHER	PTHR46247	CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC	coord: 249..424
IPR044599	CRS2-associated factor, plant	PANTHER	PTHR46247	CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC	coord: 20..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G02620.2	Clc05G02620.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000373	Group II intron splicing
biological_process	GO:0006397	mRNA processing
molecular_function	GO:0003723	RNA binding