Clc05G02470 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G02470
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	COP9 signalosome complex subunit 1
Location	ClcChr05: 1668695 .. 1673038 (-)
RNA-Seq Expression	Clc05G02470
Synteny	Clc05G02470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAAACTCACACACATTCCTGAACACAGTTACGGTCACTTTCTTCCCTCTCAGTAAACCCTAATTCTCCATCCCCAAATCCCCTTTCCTTCTTTGAATTTTCTCGATTTCGATCTTCCCATCGCTATGCAAGGCGAGGACGAGCCCTCAGGCAGCGCAACGATGGTTGAAGACGAGATCTACGCCAACGGCACAAGCTCCGACGACCAGAAGCGCAATAGACCCATTATAACTGGCGAACAGCTCGACATTGAAGCCTATGCTAGTCTCTATTCAGGTCGCACCAAGATCACTCGCCTTATCTTCATCGCTGACCGCTGCGGCGCCGAGACTAACCAGACGATGCAGCTCGAGGCGCTTCGGATGGCGTATGACGAGATTAAGAAGGGCGAGAACGCTTTGTTATTTAGGGAAGTTGTGCCGAAGATCGACGGTAGGTTGGGGCCTAACTATGGGATGGATGCCGCTTGGTGTGAGATGGTCGAGCGGAGGGCTGAACAGAGGAAGGATAAGCTCGAGAATGAACTCAATGCGTACAGGGTACATTACGTTTGATTTAAACTCTCCCGCCTTCTATTAGTGTAATTCTGCTGTGGTTCTAATGTCAATGAAAGGGGTTTACATTAGAAGTTTCGTACAATGCTCGAATTGAAGTTATCTCCTAAAAGGGCAAACAATTCGTTTGAAAATATGGGTGCAGTATAGTTAGCAACTTCTTTAGGAATTTTTTTGGTTTCCATATTTAATTTGTTGTTGTTGTTGTTACTTTCTGCAGACTAATTTGATAAAAGAAAGTATAAGGATGGGATATAATGATTTTGGAGATTTTTATTACGCTCACGGTGCGCTTGGTGATGCTTTTAAAAGTTATGTTCGTACGCGCGACTATTGTACTACATCAAAGCATATCATTCATATGTGCATGAGCGCAATTCTCGTCAGCATAGAGATGGGCCAATTTACCCATGTCACGAGCTATGTCAGCAAAGCAGAACAGACCCCGGAGGCCCTTGATGCAATTACTAGCGCAAAGCTTCGTTGTGCTGCAGGATTGGCTCACTTGGAAGCAAAGAAGTACAAACTTGCTGCCCGCAAGGTTTGTTTTCTTCTGCAAATTATGATCCAGTAGCTCCGTGGGTTCAAATTGTAATGATTGTCTTGAAGCATACTTTCTTCAAAGTTCCAATATAGAGAGTGCATATGATCATGCTTTTATCATTTTAATTGTATATTCTTCTATAAGTCGTGTTTGTGTATGATGGTCTACAGTAAAGAACAACACTATCATCACAGGCTTTCTTTATTCTATCGCCTTGTATCTAATCTAAGTTTTGCACTTGAGTTCTGCTAAATGTCTGTATTAATGTTGATTGTGGCATTTTGGGGGGGTTTTCCCCTTACATTATGATTATGCAATTCTTTGCTATATTTGCAGTTTTTGGAGACAGGTCCTGAATTAGGAAGTCATTATAACGAAGTGATTGCGCCTCAGGATGTTGCAACGTATGGTGGTCTTTGTGCACTTGCAACCTTTGACCGCTCAGAGCTTAAGGCACATATTCTTTGTTTCTTTTTCCTGCTAATCACGTTCCCTATGGAACGAAAGGCAAGTGACTTGCTGATTTTTCTGACTAATTGTTTTAATCTGGCAGTCCAAAGTTATAGACAATGTCAACTTTCGAAATTTCTTAGAGTTGGTTCCCGTAGTTCGAGAGCTGATCAATGATTTCTACTCAAGGTTTGTGGAGTTTACACTAATAAGCAGTTGTCACTAATATTTGTAAAGACATTTTCTATTTCTAGCCTTAGTTACATATCATTTCATGAAACTATCATTTCATGAACATAAATCATAAATTGGGTCAGACATGGTTTAAATGCCGCAGATGTTTTAGCAATTGGTCATATGGATTAACTTGTATGATCTGGTGCTCCTATTACCCAATAGTTTGTACTGGAAGAGATCTATTTTTCCGTTTTTTCCGTTCATGATGAAATATTCATTTTTCTTTGCAGCCATTATGCATCTTGCCTGGACTACCTTGGGAATCTTAAGCCTAACTTACTGCTTGACATTCATTTACATGACCATGTTGAGACGCTTTACGATCAAATACGTCACAAGGCTCTCATCCAGTACACACTCCCATTTGTGTCTGTTGATCTCCACATGATGGCTAATGCTTTTAAAACAAGTGTTGCTGGTCTTGAGAAAGAGCTTGAGACACTAATCACTAATAACCAAATCCAGGTTTCTTTCATACTATCTTTCATTTGTTTCTTGTTTTGATTTTTATATATTGTTATTGTTTGAAATGCTTCATGAGGGCTGCATGAATTTAGAATCTGCAGAAGAATTTATTATGAGTCATTGGAGCTATTACTTGTAACTATTAATGTGTGACTAGGCTTATGTGTCCATGTGATCACTGAAAAATGCATTCCTTTCCGCTACTTTCACAGTTGCACCTGATAATCTGGTTACCTGAATTATATTGATAGTGATTGGTCTTAGGACGGTTAGCCTCCACCCCCACAAACCCTGCAACTGATTATTGATTAACTGGGATCAAATTCAACGTCACCCTTGAACCTAGCCCCCAAGGTTGGCTTAGGCCCATAGTCTTTGTGTAATACCTACCCTATCTAGATGTCTCGTGTTTGAACCTTCAGGTGAGAACTCTTGATGTCTCCAAAGTCTAGGCCTTAGAGTAGGAGGAGAAAATGCACCATCAAACCTATTAACTGCGAAGTTTGGTAGGATGGATTCAATCAAATATTTAAATGATTTTGACATAGCTTTGAATTGTGGTAGGGCCACTTAGATGCTGTATGGCTTCACAATTCATAGGTTTGAGCTATTTGATTTTGGGGAGTTTAATTTCATAGAAGTCCTGAATTATGAATATTAAGACCAGAGCTAGAAACTTGACCAAACATTGCCCAAATTAACCAAAGTCCAGCCCACAGAACGTTTCGAAATTATGAATATCAAGACTGAGCTAGAAATCTGAGGCAATTGACTCAGGCTCACTAGCTAAGCACTGGGTTTTAAGAAAAAACTATTTGGCTCCTTGTTAGATAATCAATTGATTCTCTCCAACTGTCTTTGTTTTCTCACAATTTTCCTACAACCGTTTTCATCTTTCCTATATAAACAATTGAATATACCCAAATTCCTCCCCCCCCACCCCCCAACACACACACACACACACAAAGTTGCTATAAAACTAATCTCATAAATAATTATTTTTTTGGTTTTGAAGTTTTAGCTTACAAATAAAAACTCCACCAATGTGTTTATTTACTTTGTTAACTACTTTTTTAAAAAAAATTTCAAAATCTAAGCCAAATTTTTTTTGTTAGGAATTCAAATGTGTTTATAAGAACGTTGAAAATCACACTATAGAAATTGTAAGGAACTAGGCATAATTTAAAAAACTGAATGGTTATCAAAGGAGGTAATGCACACTCCATCCGTTACAACCATCTTCTCCTTAAATCCCAATCAACCATGTCTTGTGACTTTCGTAACCAGCTTTTATCTGGTCTTCTTCTCCACTATCATGGCCTCAATTCAAACAGTTCCAGACTTCGGAGTGTGTTTGATCTATGCCTCTATAAGGATGTTCTTTGTGTAATAGACATTGTTTAATTTTTTAAACTACTATTCTTTTGTTGTGCACACCAATCATATTGGTCCCAGTTTTTTACCCAATGAATTGGATTTGATATTTCTGTGAGGTGTTGTATTGAACAGCATAGGACTAATTCTTGGAGTATATGGAATATTCAAACCGATGATAGTATCACTGATGGTTTCTGAACAAATGCAGGCAAGAATCGACTCACACAATAAAATTCTTTATGCTCGGCATGCGGATCAGAGGAATGCAACCTTCCAAAGGGTCTTACAGACAGGGAGTGAGTTTGATCGGGAAGTCCGATCAATGCTACTGAGAGCAAATCTTATCAAGCACGACTATAACCAACGAGGAGGATCTAGAAAAATATGATATTTTTGACTCTTGGGCTGGTATGGGCTTGTTTTTCTTCTTCATTGGCTTTTCATTGTTTTAGCCATGAGAAGGTTTGCATAGAGTCAAGACTTAAATTAAAATTGGAAGTTCCATGTGAGTGAGGTGTGATTGTTAAGAGCAAGGAGGGTAGAAATTCATGCAACAATTAACACATACCGCTTGCTGGCTGCTGGTTTTGTAAATACTTATTTTTCTCAGTTGCAGTTATTGATTCTTCCAGTTTTTGCTTAGACTCCATGGAATCATGTTTCTCACTTTGGCCGTGAGTTGAATATGCAAATTAATGAGAATTTCTTCATTGTTG

mRNA sequence

GAGAAACTCACACACATTCCTGAACACAGTTACGGTCACTTTCTTCCCTCTCAGTAAACCCTAATTCTCCATCCCCAAATCCCCTTTCCTTCTTTGAATTTTCTCGATTTCGATCTTCCCATCGCTATGCAAGGCGAGGACGAGCCCTCAGGCAGCGCAACGATGGTTGAAGACGAGATCTACGCCAACGGCACAAGCTCCGACGACCAGAAGCGCAATAGACCCATTATAACTGGCGAACAGCTCGACATTGAAGCCTATGCTAGTCTCTATTCAGGTCGCACCAAGATCACTCGCCTTATCTTCATCGCTGACCGCTGCGGCGCCGAGACTAACCAGACGATGCAGCTCGAGGCGCTTCGGATGGCGTATGACGAGATTAAGAAGGGCGAGAACGCTTTGTTATTTAGGGAAGTTGTGCCGAAGATCGACGGTAGGTTGGGGCCTAACTATGGGATGGATGCCGCTTGGTGTGAGATGGTCGAGCGGAGGGCTGAACAGAGGAAGGATAAGCTCGAGAATGAACTCAATGCGTACAGGACTAATTTGATAAAAGAAAGTATAAGGATGGGATATAATGATTTTGGAGATTTTTATTACGCTCACGGTGCGCTTGGTGATGCTTTTAAAAGTTATGTTCGTACGCGCGACTATTGTACTACATCAAAGCATATCATTCATATGTGCATGAGCGCAATTCTCGTCAGCATAGAGATGGGCCAATTTACCCATGTCACGAGCTATGTCAGCAAAGCAGAACAGACCCCGGAGGCCCTTGATGCAATTACTAGCGCAAAGCTTCGTTGTGCTGCAGGATTGGCTCACTTGGAAGCAAAGAAGTACAAACTTGCTGCCCGCAAGTTTTTGGAGACAGGTCCTGAATTAGGAAGTCATTATAACGAAGTGATTGCGCCTCAGGATGTTGCAACGTATGGTGGTCTTTGTGCACTTGCAACCTTTGACCGCTCAGAGCTTAAGGCACATATTCTTTGTTTCTTTTTCCTGCTAATCACGTTCCCTATGGAACGAAAGGCAAAGTTGGTTCCCGTAGTTCGAGAGCTGATCAATGATTTCTACTCAAGCCATTATGCATCTTGCCTGGACTACCTTGGGAATCTTAAGCCTAACTTACTGCTTGACATTCATTTACATGACCATGTTGAGACGCTTTACGATCAAATACGTCACAAGGCTCTCATCCAGTACACACTCCCATTTGTGTCTGTTGATCTCCACATGATGGCTAATGCTTTTAAAACAAGTGTTGCTGGTCTTGAGAAAGAGCTTGAGACACTAATCACTAATAACCAAATCCAGGCAAGAATCGACTCACACAATAAAATTCTTTATGCTCGGCATGCGGATCAGAGGAATGCAACCTTCCAAAGGGTCTTACAGACAGGGAGTGAGTTTGATCGGGAAGTCCGATCAATGCTACTGAGAGCAAATCTTATCAAGCACGACTATAACCAACGAGGAGGATCTAGAAAAATATGATATTTTTGACTCTTGGGCTGGTATGGGCTTGTTTTTCTTCTTCATTGGCTTTTCATTGTTTTAGCCATGAGAAGGTTTGCATAGAGTCAAGACTTAAATTAAAATTGGAAGTTCCATGTGAGTGAGGTGTGATTGTTAAGAGCAAGGAGGGTAGAAATTCATGCAACAATTAACACATACCGCTTGCTGGCTGCTGGTTTTGTAAATACTTATTTTTCTCAGTTGCAGTTATTGATTCTTCCAGTTTTTGCTTAGACTCCATGGAATCATGTTTCTCACTTTGGCCGTGAGTTGAATATGCAAATTAATGAGAATTTCTTCATTGTTG

Coding sequence (CDS)

ATGCAAGGCGAGGACGAGCCCTCAGGCAGCGCAACGATGGTTGAAGACGAGATCTACGCCAACGGCACAAGCTCCGACGACCAGAAGCGCAATAGACCCATTATAACTGGCGAACAGCTCGACATTGAAGCCTATGCTAGTCTCTATTCAGGTCGCACCAAGATCACTCGCCTTATCTTCATCGCTGACCGCTGCGGCGCCGAGACTAACCAGACGATGCAGCTCGAGGCGCTTCGGATGGCGTATGACGAGATTAAGAAGGGCGAGAACGCTTTGTTATTTAGGGAAGTTGTGCCGAAGATCGACGGTAGGTTGGGGCCTAACTATGGGATGGATGCCGCTTGGTGTGAGATGGTCGAGCGGAGGGCTGAACAGAGGAAGGATAAGCTCGAGAATGAACTCAATGCGTACAGGACTAATTTGATAAAAGAAAGTATAAGGATGGGATATAATGATTTTGGAGATTTTTATTACGCTCACGGTGCGCTTGGTGATGCTTTTAAAAGTTATGTTCGTACGCGCGACTATTGTACTACATCAAAGCATATCATTCATATGTGCATGAGCGCAATTCTCGTCAGCATAGAGATGGGCCAATTTACCCATGTCACGAGCTATGTCAGCAAAGCAGAACAGACCCCGGAGGCCCTTGATGCAATTACTAGCGCAAAGCTTCGTTGTGCTGCAGGATTGGCTCACTTGGAAGCAAAGAAGTACAAACTTGCTGCCCGCAAGTTTTTGGAGACAGGTCCTGAATTAGGAAGTCATTATAACGAAGTGATTGCGCCTCAGGATGTTGCAACGTATGGTGGTCTTTGTGCACTTGCAACCTTTGACCGCTCAGAGCTTAAGGCACATATTCTTTGTTTCTTTTTCCTGCTAATCACGTTCCCTATGGAACGAAAGGCAAAGTTGGTTCCCGTAGTTCGAGAGCTGATCAATGATTTCTACTCAAGCCATTATGCATCTTGCCTGGACTACCTTGGGAATCTTAAGCCTAACTTACTGCTTGACATTCATTTACATGACCATGTTGAGACGCTTTACGATCAAATACGTCACAAGGCTCTCATCCAGTACACACTCCCATTTGTGTCTGTTGATCTCCACATGATGGCTAATGCTTTTAAAACAAGTGTTGCTGGTCTTGAGAAAGAGCTTGAGACACTAATCACTAATAACCAAATCCAGGCAAGAATCGACTCACACAATAAAATTCTTTATGCTCGGCATGCGGATCAGAGGAATGCAACCTTCCAAAGGGTCTTACAGACAGGGAGTGAGTTTGATCGGGAAGTCCGATCAATGCTACTGAGAGCAAATCTTATCAAGCACGACTATAACCAACGAGGAGGATCTAGAAAAATATGA

Protein sequence

MQGEDEPSGSATMVEDEIYANGTSSDDQKRNRPIITGEQLDIEAYASLYSGRTKITRLIFIADRCGAETNQTMQLEALRMAYDEIKKGENALLFREVVPKIDGRLGPNYGMDAAWCEMVERRAEQRKDKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYKLAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRSELKAHILCFFFLLITFPMERKAKLVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQYTLPFVSVDLHMMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDREVRSMLLRANLIKHDYNQRGGSRKI

Homology

[Close]

BLAST of Clc05G02470 vs. NCBI nr
Match: XP_008438090.1 (PREDICTED: COP9 signalosome complex subunit 1 [Cucumis melo])

HSP 1 Score: 849.4 bits (2193), Expect = 1.5e-242
Identity = 430/456 (94.30%), Postives = 437/456 (95.83%), Query Frame = 0


Query: 1   MQGEDEPSGSATMVEDEIYANGTSSDDQKRNRPIITGEQLDIEAYASLYSGRTKITRLIF 60
           MQGEDEPSGSATMVEDEI+ANGT+SDD  RNRPIITGEQLDIEAYASLYSGRTKITRLIF
Sbjct: 1   MQGEDEPSGSATMVEDEIHANGTTSDDHNRNRPIITGEQLDIEAYASLYSGRTKITRLIF 60

Query: 61  IADRCGAETNQTMQLEALRMAYDEIKKGENALLFREVVPKIDGRLGPNYGMDAAWCEMVE 120
           IAD CGAETNQTMQLEALRMAYDEIKKGENALLFREVVPKIDGRLGPNYGMDAAWCEMVE
Sbjct: 61  IADHCGAETNQTMQLEALRMAYDEIKKGENALLFREVVPKIDGRLGPNYGMDAAWCEMVE 120

Query: 121 RRAEQRKDKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS 180
           RRAEQRKDKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS
Sbjct: 121 RRAEQRKDKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS 180

Query: 181 KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK 240
           KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK
Sbjct: 181 KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK 240

Query: 241 LAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRSELKAHILCFFFLLITFPME 300
           LAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRSELK+ +      +      
Sbjct: 241 LAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRSELKSKV------IDNVNFR 300

Query: 301 RKAKLVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY 360
              +LVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY
Sbjct: 301 NFLELVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY 360

Query: 361 TLPFVSVDLHMMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ 420
           TLPFVSVDLHMMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ
Sbjct: 361 TLPFVSVDLHMMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ 420

Query: 421 RVLQTGSEFDREVRSMLLRANLIKHDYNQRGGSRKI 457
           RVLQ+GSEFDREVRSMLLRANLIKHDYNQRGGSRKI
Sbjct: 421 RVLQSGSEFDREVRSMLLRANLIKHDYNQRGGSRKI 450

[Close]

BLAST of Clc05G02470 vs. NCBI nr
Match: XP_038897066.1 (LOW QUALITY PROTEIN: COP9 signalosome complex subunit 1 [Benincasa hispida])

HSP 1 Score: 846.7 bits (2186), Expect = 9.6e-242
Identity = 429/456 (94.08%), Postives = 436/456 (95.61%), Query Frame = 0


Query: 1   MQGEDEPSGSATMVEDEIYANGTSSDDQKRNRPIITGEQLDIEAYASLYSGRTKITRLIF 60
           MQGEDEPSGSATMVEDEIYANGTS+DDQKRNRPIITGEQLDIEAYASLYSGRTKITRLIF
Sbjct: 1   MQGEDEPSGSATMVEDEIYANGTSADDQKRNRPIITGEQLDIEAYASLYSGRTKITRLIF 60

Query: 61  IADRCGAETNQTMQLEALRMAYDEIKKGENALLFREVVPKIDGRLGPNYGMDAAWCEMVE 120
           IAD CGAETNQTMQLEALRMAYDEIKKGENALLFREVVPKIDGRLGPNYGMDAAWCEMVE
Sbjct: 61  IADHCGAETNQTMQLEALRMAYDEIKKGENALLFREVVPKIDGRLGPNYGMDAAWCEMVE 120

Query: 121 RRAEQRKDKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS 180
           RRAEQRKDKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS
Sbjct: 121 RRAEQRKDKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS 180

Query: 181 KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK 240
           KHIIHMCMSAILVSIEMGQFTHVTS VSKAE TP+ALDAITSAKLRCAA LAHLEAKKYK
Sbjct: 181 KHIIHMCMSAILVSIEMGQFTHVTSXVSKAEXTPDALDAITSAKLRCAARLAHLEAKKYK 240

Query: 241 LAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRSELKAHILCFFFLLITFPME 300
           LAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRSELK+ +      +      
Sbjct: 241 LAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRSELKSKV------IDNVNFR 300

Query: 301 RKAKLVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY 360
              +LVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY
Sbjct: 301 NFLELVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY 360

Query: 361 TLPFVSVDLHMMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ 420
           TLPFVSVDLHMMANAFKTS+AGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ
Sbjct: 361 TLPFVSVDLHMMANAFKTSIAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ 420

Query: 421 RVLQTGSEFDREVRSMLLRANLIKHDYNQRGGSRKI 457
           RVLQTGSEFDREVRSMLLRANLIKHDYNQRGGSRKI
Sbjct: 421 RVLQTGSEFDREVRSMLLRANLIKHDYNQRGGSRKI 450

[Close]

BLAST of Clc05G02470 vs. NCBI nr
Match: XP_004133880.1 (COP9 signalosome complex subunit 1 [Cucumis sativus] >KGN56548.1 hypothetical protein Csa_010968 [Cucumis sativus])

HSP 1 Score: 846.3 bits (2185), Expect = 1.3e-241
Identity = 428/456 (93.86%), Postives = 436/456 (95.61%), Query Frame = 0


Query: 1   MQGEDEPSGSATMVEDEIYANGTSSDDQKRNRPIITGEQLDIEAYASLYSGRTKITRLIF 60
           MQGEDEPSGSATMVEDEI+ANGT+SDD  RNRPIITGEQLDIEAYASLYSGRTKITRLIF
Sbjct: 1   MQGEDEPSGSATMVEDEIHANGTTSDDHNRNRPIITGEQLDIEAYASLYSGRTKITRLIF 60

Query: 61  IADRCGAETNQTMQLEALRMAYDEIKKGENALLFREVVPKIDGRLGPNYGMDAAWCEMVE 120
           IAD CGAETN TMQLEALRMAYDEIKKGENALLFREVVPKIDGRLGPNYGMDAAWCEMVE
Sbjct: 61  IADHCGAETNHTMQLEALRMAYDEIKKGENALLFREVVPKIDGRLGPNYGMDAAWCEMVE 120

Query: 121 RRAEQRKDKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS 180
           RRAEQRKDKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS
Sbjct: 121 RRAEQRKDKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS 180

Query: 181 KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK 240
           KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK
Sbjct: 181 KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK 240

Query: 241 LAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRSELKAHILCFFFLLITFPME 300
           LAARKFLETGPELG+HYNEVIAPQDVATYGGLCALATFDRSELK+ +      +      
Sbjct: 241 LAARKFLETGPELGNHYNEVIAPQDVATYGGLCALATFDRSELKSKV------IDNVNFR 300

Query: 301 RKAKLVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY 360
              +LVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY
Sbjct: 301 NFLELVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY 360

Query: 361 TLPFVSVDLHMMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ 420
           TLPFVSVDLHMMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ
Sbjct: 361 TLPFVSVDLHMMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ 420

Query: 421 RVLQTGSEFDREVRSMLLRANLIKHDYNQRGGSRKI 457
           RVLQ+GSEFDREVRSMLLRANLIKHDYNQRGGSRKI
Sbjct: 421 RVLQSGSEFDREVRSMLLRANLIKHDYNQRGGSRKI 450

[Close]

BLAST of Clc05G02470 vs. NCBI nr
Match: XP_023539767.1 (COP9 signalosome complex subunit 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 842.0 bits (2174), Expect = 2.4e-240
Identity = 427/456 (93.64%), Postives = 433/456 (94.96%), Query Frame = 0


Query: 1   MQGEDEPSGSATMVEDEIYANGTSSDDQKRNRPIITGEQLDIEAYASLYSGRTKITRLIF 60
           MQGEDEPSGSATMVEDEIY NGTS DD+KRNRPIITGEQLDIEAYASLYSGRTKITRLIF
Sbjct: 1   MQGEDEPSGSATMVEDEIYDNGTSPDDEKRNRPIITGEQLDIEAYASLYSGRTKITRLIF 60

Query: 61  IADRCGAETNQTMQLEALRMAYDEIKKGENALLFREVVPKIDGRLGPNYGMDAAWCEMVE 120
           IAD C AETNQTMQLEALRMAYDEIKKGENALLFREVVPKID RLGPNYGMDA WCEMVE
Sbjct: 61  IADHCDAETNQTMQLEALRMAYDEIKKGENALLFREVVPKIDRRLGPNYGMDATWCEMVE 120

Query: 121 RRAEQRKDKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS 180
           RRAEQRK+KLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS
Sbjct: 121 RRAEQRKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS 180

Query: 181 KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK 240
           KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK
Sbjct: 181 KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK 240

Query: 241 LAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRSELKAHILCFFFLLITFPME 300
           LAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRSELK+ +      +      
Sbjct: 241 LAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRSELKSKV------IDNVNFR 300

Query: 301 RKAKLVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY 360
              +LVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY
Sbjct: 301 NFLELVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY 360

Query: 361 TLPFVSVDLHMMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ 420
           TLPFVSVDLHMMANAFKTSV GLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ
Sbjct: 361 TLPFVSVDLHMMANAFKTSVTGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ 420

Query: 421 RVLQTGSEFDREVRSMLLRANLIKHDYNQRGGSRKI 457
           RVLQTGSEFDREVRSMLLRANLIKHDYNQRGGSRKI
Sbjct: 421 RVLQTGSEFDREVRSMLLRANLIKHDYNQRGGSRKI 450

[Close]

BLAST of Clc05G02470 vs. NCBI nr
Match: KAG6597162.1 (COP9 signalosome complex subunit 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 840.9 bits (2171), Expect = 5.3e-240
Identity = 426/456 (93.42%), Postives = 433/456 (94.96%), Query Frame = 0


Query: 1   MQGEDEPSGSATMVEDEIYANGTSSDDQKRNRPIITGEQLDIEAYASLYSGRTKITRLIF 60
           MQGEDEPSGSATMVEDEIY NGTS DD+KRNRPIITGEQLDIEAYASLYSGRTKITRLIF
Sbjct: 1   MQGEDEPSGSATMVEDEIYDNGTSPDDEKRNRPIITGEQLDIEAYASLYSGRTKITRLIF 60

Query: 61  IADRCGAETNQTMQLEALRMAYDEIKKGENALLFREVVPKIDGRLGPNYGMDAAWCEMVE 120
           IAD C AETNQTMQLEALRMAYDEIKKGENALLFREVVPKID RLGPNYGMDA WCEMVE
Sbjct: 61  IADHCDAETNQTMQLEALRMAYDEIKKGENALLFREVVPKIDRRLGPNYGMDATWCEMVE 120

Query: 121 RRAEQRKDKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS 180
           RRAEQRK+KLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS
Sbjct: 121 RRAEQRKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS 180

Query: 181 KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK 240
           KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK
Sbjct: 181 KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK 240

Query: 241 LAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRSELKAHILCFFFLLITFPME 300
           LAARKFLETGPELG+HYNEVIAPQDVATYGGLCALATFDRSELK+ +      +      
Sbjct: 241 LAARKFLETGPELGNHYNEVIAPQDVATYGGLCALATFDRSELKSKV------IDNVNFR 300

Query: 301 RKAKLVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY 360
              +LVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY
Sbjct: 301 NFLELVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY 360

Query: 361 TLPFVSVDLHMMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ 420
           TLPFVSVDLHMMANAFKTSV GLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ
Sbjct: 361 TLPFVSVDLHMMANAFKTSVTGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ 420

Query: 421 RVLQTGSEFDREVRSMLLRANLIKHDYNQRGGSRKI 457
           RVLQTGSEFDREVRSMLLRANLIKHDYNQRGGSRKI
Sbjct: 421 RVLQTGSEFDREVRSMLLRANLIKHDYNQRGGSRKI 450

[Close]

BLAST of Clc05G02470 vs. ExPASy Swiss-Prot
Match: P45432 (COP9 signalosome complex subunit 1 OS=Arabidopsis thaliana OX=3702 GN=CSN1 PE=1 SV=2)

HSP 1 Score: 645.6 bits (1664), Expect = 4.3e-184
Identity = 330/454 (72.69%), Postives = 376/454 (82.82%), Query Frame = 0


Query: 1   MQGEDEPSGSATMVEDEIYANGTSSDDQKRNRPIITGEQLDIEAYASLYSGRTKITRLIF 60
           M+ ++E SG       E+  NG   ++    RPII+GE LDIEAYA+LY GRTKI RL+F
Sbjct: 1   MERDEEASGPMM----EMCTNG--GEETSNRRPIISGEPLDIEAYAALYKGRTKIMRLLF 60

Query: 61  IADRCGAETNQTMQLEALRMAYDEIKKGENALLFREVVPKIDGRLGPNYGMDAAWCEMVE 120
           IA+ CG   N  +Q +ALRMAYDEIKKGEN  LFREVV KI  RLG  YGMD AWCE V+
Sbjct: 61  IANHCGG--NHALQFDALRMAYDEIKKGENTQLFREVVNKIGNRLGEKYGMDLAWCEAVD 120

Query: 121 RRAEQRKDKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS 180
           RRAEQ+K KLENEL++YRTNLIKESIRMGYNDFGDFYYA G LGDAFK+Y+RTRDYCTT+
Sbjct: 121 RRAEQKKVKLENELSSYRTNLIKESIRMGYNDFGDFYYACGMLGDAFKNYIRTRDYCTTT 180

Query: 181 KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK 240
           KHIIHMCM+AILVSIEMGQFTHVTSYV+KAEQ PE L+ + +AKLRCA+GLAHLE KKYK
Sbjct: 181 KHIIHMCMNAILVSIEMGQFTHVTSYVNKAEQNPETLEPMVNAKLRCASGLAHLELKKYK 240

Query: 241 LAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRSELKAHILCFFFLLITFPME 300
           LAARKFL+  PELG+ YNEVIAPQD+ATYGGLCALA+FDRSELK  +      +      
Sbjct: 241 LAARKFLDVNPELGNSYNEVIAPQDIATYGGLCALASFDRSELKQKV------IDNINFR 300

Query: 301 RKAKLVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY 360
              +LVP VRELINDFYSS YASCL+YL +LK NLLLDIHLHDHV+TLYDQIR KALIQY
Sbjct: 301 NFLELVPDVRELINDFYSSRYASCLEYLASLKSNLLLDIHLHDHVDTLYDQIRKKALIQY 360

Query: 361 TLPFVSVDLHMMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ 420
           TLPFVSVDL  MA+AFKTSV+GLEKELE LIT+NQIQARIDSHNKILYARHADQRNATFQ
Sbjct: 361 TLPFVSVDLSRMADAFKTSVSGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQ 420

Query: 421 RVLQTGSEFDREVRSMLLRANLIKHDYNQRGGSR 455
           +VLQ G+EFDR+VR+MLLRANL+KH+Y+ R   +
Sbjct: 421 KVLQMGNEFDRDVRAMLLRANLLKHEYHARSARK 440

[Close]

BLAST of Clc05G02470 vs. ExPASy Swiss-Prot
Match: Q54QX3 (COP9 signalosome complex subunit 1 OS=Dictyostelium discoideum OX=44689 GN=csn1 PE=1 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 2.7e-106
Identity = 203/426 (47.65%), Postives = 285/426 (66.90%), Query Frame = 0


Query: 22  GTSSDDQKRNRPIITGEQLDIEAYASLYSGRTKITRLIFIADRCGAETNQTMQLEALRMA 81
           G+SS     N       + D+E Y + YSG TKI RLIFIAD C     + +++EA  MA
Sbjct: 12  GSSSSSSNNNNNNSISNEFDLETYINNYSGFTKIHRLIFIADNC-----KQLEVEAYNMA 71

Query: 82  YDEIKKGENALLFREVVPKIDGRLGPNYGMDAAWCEMVERRAEQRKDKLENELNAYRTNL 141
             E++K  N  L+  ++ K  G L     +D  + E + ++   + DKLE +LN  ++N+
Sbjct: 72  LKEVQKTPNLELYNTIINKSHGIL----ELDPVYIENLSKKNSLQLDKLEQDLNTAKSNM 131

Query: 142 IKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFT 201
           +K+SIR   ND G+FYY  G   +A K ++RTRDYCTTSKH++ MC + I + ++   +T
Sbjct: 132 VKDSIRFAQNDLGEFYYKIGDHQNALKCFIRTRDYCTTSKHVLAMCFNIIKLGVDTQNYT 191

Query: 202 HVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYKLAARKFLETGPELGSHYNEVI 261
           H  SY++KAEQ+P+ LD +++AKLR   GL +L+  +YKLAARKF+ET  E  + ++++I
Sbjct: 192 HAPSYIAKAEQSPD-LDNVSNAKLRSVNGLYNLDGSRYKLAARKFIETPFEQSNVFSDII 251

Query: 262 APQDVATYGGLCALATFDRSELKAHILCFFFLLITFPM-ERKAKLVPVVRELINDFYSSH 321
           +PQD+A YGGLCALATFDR+ELK  +       I  PM +   +LVP +RELINDFY++ 
Sbjct: 252 SPQDIAYYGGLCALATFDRNELKKKV-------IDDPMFKNYLELVPELRELINDFYNTK 311

Query: 322 YASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQYTLPFVSVDLHMMANAFKTSV 381
           Y SCL YL  +KP LLLDIHL+ HVE LY +IR KAL+QY  P+ SVD+++MA+AF T+V
Sbjct: 312 YGSCLKYLDKMKPILLLDIHLYKHVEILYQRIRSKALVQYFSPYQSVDMNIMASAFNTTV 371

Query: 382 AGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDREVRSMLLRA 441
             LEKE+  LI  N+IQARIDSHNK LYAR ADQR  TF++ +Q GS+F     S+LLR 
Sbjct: 372 TLLEKEISKLIMENEIQARIDSHNKRLYARKADQRTTTFEKTVQVGSDFQNSSNSLLLRL 420

Query: 442 NLIKHD 447
            ++ ++
Sbjct: 432 EMLNNN 420

[Close]

BLAST of Clc05G02470 vs. ExPASy Swiss-Prot
Match: Q6NRT5 (COP9 signalosome complex subunit 1 OS=Xenopus laevis OX=8355 GN=csn1 PE=2 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 5.9e-93
Identity = 198/457 (43.33%), Postives = 282/457 (61.71%), Query Frame = 0


Query: 27  DQKRNRP----IITGEQLDIEAYASLYSGRTKITRLIFIADRCGAETNQTMQLEALRMAY 86
           D ++N P    ++    LD+E YAS YSG  +I RL FIADRC       +++EAL+MA 
Sbjct: 25  DDQQNMPDVNYVVENPTLDLEQYASSYSGLMRIERLQFIADRC-----PQLRVEALKMAL 84

Query: 87  DEIKKGENALLFREVVPKI---------------DGRLGPNYGMDAAWCEMVERRAEQRK 146
             +++  N  ++ ++  K+               +G + P   +D +W E   ++A  + 
Sbjct: 85  SFVQRTFNVDVYEDIHRKLAEASREVQNAPDAVPEGSMEPP-ALDTSWVEATRKKALLKL 144

Query: 147 DKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMC 206
           +KL+ +L  Y+ N IKESIR G++D GD Y   G L +A K Y R RDYCT++KH+I+MC
Sbjct: 145 EKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMC 204

Query: 207 MSAILVSIEMGQFTHVTSYVSKAEQTPEAL------DAITSA---KLRCAAGLAHLEAKK 266
           ++ I VS+ +  ++HV SYVSKAE TPE        D+ T A   KL+CAAGLA L A+K
Sbjct: 205 LNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAVLTKLKCAAGLAELAARK 264

Query: 267 YKLAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRSELKAHILCFFFLLITFP 326
           YK AA+ FL    +    + E+++P +VA YGGLCALATFDR EL+ +++      +   
Sbjct: 265 YKQAAKCFLLASFD-HCDFPELLSPSNVAVYGGLCALATFDRQELQRNVISSSSFKLFLE 324

Query: 327 MERKAKLVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALI 386
           +E      P VR++I  FY S YASCL  L  +K NLLLD++L  HV TLY QIR++ALI
Sbjct: 325 LE------PQVRDIIFKFYESKYASCLKMLDEIKDNLLLDMYLAPHVRTLYTQIRNRALI 384

Query: 387 QYTLPFVSVDLHMMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNAT 446
           QY  P+VS D++ MA AF T+V+ LE EL  LI    I ARIDSH+KILYAR  DQR+ T
Sbjct: 385 QYFSPYVSADMYKMATAFNTTVSALEDELTQLILEGLINARIDSHSKILYARDVDQRSTT 444

Query: 447 FQRVLQTGSEFDREVRSMLLRANLIKHDYNQRGGSRK 456
           F++ LQ G EF R  ++M+LRA ++++  + +   R+
Sbjct: 445 FEKSLQMGREFQRRAKAMILRAAVLRNQIHVKSPPRE 468

[Close]

BLAST of Clc05G02470 vs. ExPASy Swiss-Prot
Match: Q99LD4 (COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 2.2e-92
Identity = 197/445 (44.27%), Postives = 274/445 (61.57%), Query Frame = 0


Query: 34  IITGEQLDIEAYASLYSGRTKITRLIFIADRCGAETNQTMQLEALRMAYDEIKKGENALL 93
           ++    LD+E YA+ YSG  +I RL FIADRC       +++EAL+MA   +++  N  +
Sbjct: 20  VVENPTLDLEQYAASYSGLMRIERLQFIADRC-----PPLRVEALKMALSFVQRTFNVDM 79

Query: 94  FREVVPKIDGRLG---------PNYG-----MDAAWCEMVERRAEQRKDKLENELNAYRT 153
           + E+  K+              P  G     +D AW E   ++A  + +KL+ +L  Y+ 
Sbjct: 80  YEEIHRKLSEATRELQNAPDAIPESGVEPPPLDTAWVEATRKKALLKLEKLDTDLKNYKG 139

Query: 154 NLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQ 213
           N IKESIR G++D GD Y   G L +A K Y R RDYCT++KH+I+MC++ I VS+ +  
Sbjct: 140 NSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQN 199

Query: 214 FTHVTSYVSKAEQTPEAL------DAITSA---KLRCAAGLAHLEAKKYKLAARKFLETG 273
           ++HV SYVSKAE TPE        D+ T A   KL+CAAGLA L A+KYK AA+ FL   
Sbjct: 200 WSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCFLLAS 259

Query: 274 PELGSHYNEVIAPQDVATYGGLCALATFDRSELKAHILCFFFLLITFPMERKAKLVPVVR 333
            +    + E+++P +VA YGGLCALATFDR EL+ +++      +   +E      P VR
Sbjct: 260 FD-HCDFPELLSPSNVAVYGGLCALATFDRQELQRNVISSSSFKLFLELE------PQVR 319

Query: 334 ELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQYTLPFVSVDLH 393
           ++I  FY S YASCL  L  +K NLLLD++L  HV TLY QIR++ALIQY  P+VS D+H
Sbjct: 320 DIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMH 379

Query: 394 MMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFD 453
            MA AF T+VA LE EL  LI    I ARIDSH+KILYAR  DQR+ TF++ L  G EF 
Sbjct: 380 KMAAAFNTTVAALEDELTQLILEGLINARIDSHSKILYARDVDQRSTTFEKSLLMGKEFQ 439

Query: 454 REVRSMLLRANLIKHDYNQRGGSRK 456
           R  ++M+LRA ++++  + +   R+
Sbjct: 440 RRAKAMILRAAVLRNQIHVKSPPRE 452

[Close]

BLAST of Clc05G02470 vs. ExPASy Swiss-Prot
Match: P97834 (COP9 signalosome complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Gps1 PE=1 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 5.0e-92
Identity = 196/445 (44.04%), Postives = 274/445 (61.57%), Query Frame = 0


Query: 34  IITGEQLDIEAYASLYSGRTKITRLIFIADRCGAETNQTMQLEALRMAYDEIKKGENALL 93
           ++    LD+E YA+ YSG  +I RL FIADRC       +++EAL+MA   +++  N  +
Sbjct: 20  VVENPTLDLEQYAASYSGLMRIERLQFIADRC-----PPLRVEALKMALSFVQRTFNVDM 79

Query: 94  FREVVPKIDGRLG---------PNYG-----MDAAWCEMVERRAEQRKDKLENELNAYRT 153
           + E+  K+              P  G     +D AW E   ++A  + +KL+ +L  Y+ 
Sbjct: 80  YEEIHRKLSEATRELQNAPDAIPESGVEPPPLDTAWVEATRKKALLKLEKLDTDLKNYKG 139

Query: 154 NLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQ 213
           N IKESIR G++D GD Y   G L +A K Y R RDYCT++KH+I+MC++ I VS+ +  
Sbjct: 140 NSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQN 199

Query: 214 FTHVTSYVSKAEQTPEAL------DAITSA---KLRCAAGLAHLEAKKYKLAARKFLETG 273
           ++HV SYVSKAE TPE        D+ T A   KL+CAAGLA L A+KYK AA+ FL   
Sbjct: 200 WSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCFLLAS 259

Query: 274 PELGSHYNEVIAPQDVATYGGLCALATFDRSELKAHILCFFFLLITFPMERKAKLVPVVR 333
            +    + E+++P +VA YGGLCALATFDR EL+ +++      +   +E      P VR
Sbjct: 260 FD-HCDFPELLSPSNVAVYGGLCALATFDRQELQRNVISSSSFKLFLELE------PQVR 319

Query: 334 ELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQYTLPFVSVDLH 393
           ++I  FY S YASCL  L  +K NLLLD++L  HV TLY QIR++ALIQY  P+VS D+H
Sbjct: 320 DIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMH 379

Query: 394 MMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFD 453
            MA AF T+VA LE EL  +I    I ARIDSH+KILYAR  DQR+ TF++ L  G EF 
Sbjct: 380 KMAAAFNTTVAALEDELTQVILEGLINARIDSHSKILYARDVDQRSTTFEKSLLMGKEFQ 439

Query: 454 REVRSMLLRANLIKHDYNQRGGSRK 456
           R  ++M+LRA ++++  + +   R+
Sbjct: 440 RRAKAMILRAAVLRNQIHVKSPPRE 452

[Close]

BLAST of Clc05G02470 vs. ExPASy TrEMBL
Match: A0A1S3AV75 (COP9 signalosome complex subunit 1 OS=Cucumis melo OX=3656 GN=LOC103483302 PE=4 SV=1)

HSP 1 Score: 849.4 bits (2193), Expect = 7.2e-243
Identity = 430/456 (94.30%), Postives = 437/456 (95.83%), Query Frame = 0


Query: 1   MQGEDEPSGSATMVEDEIYANGTSSDDQKRNRPIITGEQLDIEAYASLYSGRTKITRLIF 60
           MQGEDEPSGSATMVEDEI+ANGT+SDD  RNRPIITGEQLDIEAYASLYSGRTKITRLIF
Sbjct: 1   MQGEDEPSGSATMVEDEIHANGTTSDDHNRNRPIITGEQLDIEAYASLYSGRTKITRLIF 60

Query: 61  IADRCGAETNQTMQLEALRMAYDEIKKGENALLFREVVPKIDGRLGPNYGMDAAWCEMVE 120
           IAD CGAETNQTMQLEALRMAYDEIKKGENALLFREVVPKIDGRLGPNYGMDAAWCEMVE
Sbjct: 61  IADHCGAETNQTMQLEALRMAYDEIKKGENALLFREVVPKIDGRLGPNYGMDAAWCEMVE 120

Query: 121 RRAEQRKDKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS 180
           RRAEQRKDKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS
Sbjct: 121 RRAEQRKDKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS 180

Query: 181 KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK 240
           KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK
Sbjct: 181 KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK 240

Query: 241 LAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRSELKAHILCFFFLLITFPME 300
           LAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRSELK+ +      +      
Sbjct: 241 LAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRSELKSKV------IDNVNFR 300

Query: 301 RKAKLVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY 360
              +LVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY
Sbjct: 301 NFLELVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY 360

Query: 361 TLPFVSVDLHMMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ 420
           TLPFVSVDLHMMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ
Sbjct: 361 TLPFVSVDLHMMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ 420

Query: 421 RVLQTGSEFDREVRSMLLRANLIKHDYNQRGGSRKI 457
           RVLQ+GSEFDREVRSMLLRANLIKHDYNQRGGSRKI
Sbjct: 421 RVLQSGSEFDREVRSMLLRANLIKHDYNQRGGSRKI 450

[Close]

BLAST of Clc05G02470 vs. ExPASy TrEMBL
Match: A0A0A0L4A8 (PCI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G123210 PE=4 SV=1)

HSP 1 Score: 846.3 bits (2185), Expect = 6.1e-242
Identity = 428/456 (93.86%), Postives = 436/456 (95.61%), Query Frame = 0


Query: 1   MQGEDEPSGSATMVEDEIYANGTSSDDQKRNRPIITGEQLDIEAYASLYSGRTKITRLIF 60
           MQGEDEPSGSATMVEDEI+ANGT+SDD  RNRPIITGEQLDIEAYASLYSGRTKITRLIF
Sbjct: 1   MQGEDEPSGSATMVEDEIHANGTTSDDHNRNRPIITGEQLDIEAYASLYSGRTKITRLIF 60

Query: 61  IADRCGAETNQTMQLEALRMAYDEIKKGENALLFREVVPKIDGRLGPNYGMDAAWCEMVE 120
           IAD CGAETN TMQLEALRMAYDEIKKGENALLFREVVPKIDGRLGPNYGMDAAWCEMVE
Sbjct: 61  IADHCGAETNHTMQLEALRMAYDEIKKGENALLFREVVPKIDGRLGPNYGMDAAWCEMVE 120

Query: 121 RRAEQRKDKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS 180
           RRAEQRKDKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS
Sbjct: 121 RRAEQRKDKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS 180

Query: 181 KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK 240
           KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK
Sbjct: 181 KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK 240

Query: 241 LAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRSELKAHILCFFFLLITFPME 300
           LAARKFLETGPELG+HYNEVIAPQDVATYGGLCALATFDRSELK+ +      +      
Sbjct: 241 LAARKFLETGPELGNHYNEVIAPQDVATYGGLCALATFDRSELKSKV------IDNVNFR 300

Query: 301 RKAKLVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY 360
              +LVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY
Sbjct: 301 NFLELVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY 360

Query: 361 TLPFVSVDLHMMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ 420
           TLPFVSVDLHMMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ
Sbjct: 361 TLPFVSVDLHMMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ 420

Query: 421 RVLQTGSEFDREVRSMLLRANLIKHDYNQRGGSRKI 457
           RVLQ+GSEFDREVRSMLLRANLIKHDYNQRGGSRKI
Sbjct: 421 RVLQSGSEFDREVRSMLLRANLIKHDYNQRGGSRKI 450

[Close]

BLAST of Clc05G02470 vs. ExPASy TrEMBL
Match: A0A6J1IK85 (COP9 signalosome complex subunit 1-like OS=Cucurbita maxima OX=3661 GN=LOC111474593 PE=4 SV=1)

HSP 1 Score: 839.7 bits (2168), Expect = 5.7e-240
Identity = 426/456 (93.42%), Postives = 432/456 (94.74%), Query Frame = 0


Query: 1   MQGEDEPSGSATMVEDEIYANGTSSDDQKRNRPIITGEQLDIEAYASLYSGRTKITRLIF 60
           MQGEDEPSGSATMVEDEIY NGTS DD+KRNRPIITGEQLDIEAYASLYSGRTKITRLIF
Sbjct: 1   MQGEDEPSGSATMVEDEIYDNGTSPDDEKRNRPIITGEQLDIEAYASLYSGRTKITRLIF 60

Query: 61  IADRCGAETNQTMQLEALRMAYDEIKKGENALLFREVVPKIDGRLGPNYGMDAAWCEMVE 120
           IAD C AETNQTMQLEALRMAYDEIKKGENALLFREVVPKID RLGPNYGMDA WCEMVE
Sbjct: 61  IADHCDAETNQTMQLEALRMAYDEIKKGENALLFREVVPKIDRRLGPNYGMDATWCEMVE 120

Query: 121 RRAEQRKDKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS 180
           RRAEQRK+KLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS
Sbjct: 121 RRAEQRKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS 180

Query: 181 KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK 240
           KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK
Sbjct: 181 KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK 240

Query: 241 LAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRSELKAHILCFFFLLITFPME 300
           LAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDR ELK+ +      +      
Sbjct: 241 LAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRLELKSKV------IDNVNFR 300

Query: 301 RKAKLVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY 360
              +LVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY
Sbjct: 301 NFLELVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY 360

Query: 361 TLPFVSVDLHMMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ 420
           TLPFVSVDLHMMANAFKTSV GLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ
Sbjct: 361 TLPFVSVDLHMMANAFKTSVTGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ 420

Query: 421 RVLQTGSEFDREVRSMLLRANLIKHDYNQRGGSRKI 457
           RVLQTGSEFDREVRSMLLRANLIKHDYNQRGGSRKI
Sbjct: 421 RVLQTGSEFDREVRSMLLRANLIKHDYNQRGGSRKI 450

[Close]

BLAST of Clc05G02470 vs. ExPASy TrEMBL
Match: A0A6J1FHU8 (COP9 signalosome complex subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111445571 PE=4 SV=1)

HSP 1 Score: 839.7 bits (2168), Expect = 5.7e-240
Identity = 425/456 (93.20%), Postives = 433/456 (94.96%), Query Frame = 0


Query: 1   MQGEDEPSGSATMVEDEIYANGTSSDDQKRNRPIITGEQLDIEAYASLYSGRTKITRLIF 60
           MQGEDEPSGSATMVEDEIY NGTS DD+KRNRPIITGEQLDIEAYASLYSGRTKITRLIF
Sbjct: 1   MQGEDEPSGSATMVEDEIYDNGTSPDDEKRNRPIITGEQLDIEAYASLYSGRTKITRLIF 60

Query: 61  IADRCGAETNQTMQLEALRMAYDEIKKGENALLFREVVPKIDGRLGPNYGMDAAWCEMVE 120
           IAD C AETNQTMQLEALRMAYDEIKKGENALLFREVVPKID RLGPNYGMDA WCEMVE
Sbjct: 61  IADHCDAETNQTMQLEALRMAYDEIKKGENALLFREVVPKIDRRLGPNYGMDATWCEMVE 120

Query: 121 RRAEQRKDKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS 180
           RRAEQRK+KLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS
Sbjct: 121 RRAEQRKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS 180

Query: 181 KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK 240
           KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK
Sbjct: 181 KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK 240

Query: 241 LAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRSELKAHILCFFFLLITFPME 300
           LAARKFLETGPELG+HYNEVIAPQDVATYGGLCALATFDRSELK+ +      +      
Sbjct: 241 LAARKFLETGPELGNHYNEVIAPQDVATYGGLCALATFDRSELKSKV------IDNVNFR 300

Query: 301 RKAKLVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY 360
              +LVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY
Sbjct: 301 NFLELVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY 360

Query: 361 TLPFVSVDLHMMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ 420
           TLPFVSVDLHMMANAFKTSV GLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ
Sbjct: 361 TLPFVSVDLHMMANAFKTSVTGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ 420

Query: 421 RVLQTGSEFDREVRSMLLRANLIKHDYNQRGGSRKI 457
           RVLQTGSEFDREVRS+LLRANLIKHDYNQRGGSRKI
Sbjct: 421 RVLQTGSEFDREVRSLLLRANLIKHDYNQRGGSRKI 450

[Close]

BLAST of Clc05G02470 vs. ExPASy TrEMBL
Match: A0A6J1EEU1 (COP9 signalosome complex subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111431883 PE=4 SV=1)

HSP 1 Score: 831.2 bits (2146), Expect = 2.0e-237
Identity = 419/456 (91.89%), Postives = 431/456 (94.52%), Query Frame = 0


Query: 1   MQGEDEPSGSATMVEDEIYANGTSSDDQKRNRPIITGEQLDIEAYASLYSGRTKITRLIF 60
           MQGEDEPS SATMVEDEIYANGTS+DDQKRNRPIITGEQLDIEAYASLYSGRTKITRLIF
Sbjct: 1   MQGEDEPSSSATMVEDEIYANGTSADDQKRNRPIITGEQLDIEAYASLYSGRTKITRLIF 60

Query: 61  IADRCGAETNQTMQLEALRMAYDEIKKGENALLFREVVPKIDGRLGPNYGMDAAWCEMVE 120
           IAD CGA+TNQTMQLEALRMAYDEIKKGEN LLFREVV KIDGRLGP+YGMDA WCEM+E
Sbjct: 61  IADHCGADTNQTMQLEALRMAYDEIKKGENTLLFREVVTKIDGRLGPDYGMDATWCEMIE 120

Query: 121 RRAEQRKDKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS 180
           RRAEQRKDKLENELNAYRTNLIKES+RMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS
Sbjct: 121 RRAEQRKDKLENELNAYRTNLIKESLRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS 180

Query: 181 KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK 240
           KHIIHMCMSAILVSIEMGQFTHVTSY SKAEQTPEALDAITSAKLRCAAGLAHLE KKYK
Sbjct: 181 KHIIHMCMSAILVSIEMGQFTHVTSYASKAEQTPEALDAITSAKLRCAAGLAHLEVKKYK 240

Query: 241 LAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRSELKAHILCFFFLLITFPME 300
           LAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRSELK+ +      +      
Sbjct: 241 LAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRSELKSKV------IDNVNFR 300

Query: 301 RKAKLVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY 360
              +LVPVVRELINDFYSS YASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY
Sbjct: 301 NFLELVPVVRELINDFYSSRYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY 360

Query: 361 TLPFVSVDLHMMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ 420
           TLPFVSVDL MMA+AFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ
Sbjct: 361 TLPFVSVDLRMMADAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ 420

Query: 421 RVLQTGSEFDREVRSMLLRANLIKHDYNQRGGSRKI 457
           RVLQTGS+FDRE+RSMLLRANLIKHDYNQRGGSRKI
Sbjct: 421 RVLQTGSDFDREIRSMLLRANLIKHDYNQRGGSRKI 450

[Close]

BLAST of Clc05G02470 vs. TAIR 10
Match: AT3G61140.1 (26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain )

HSP 1 Score: 645.6 bits (1664), Expect = 3.0e-185
Identity = 330/454 (72.69%), Postives = 376/454 (82.82%), Query Frame = 0


Query: 1   MQGEDEPSGSATMVEDEIYANGTSSDDQKRNRPIITGEQLDIEAYASLYSGRTKITRLIF 60
           M+ ++E SG       E+  NG   ++    RPII+GE LDIEAYA+LY GRTKI RL+F
Sbjct: 1   MERDEEASGPMM----EMCTNG--GEETSNRRPIISGEPLDIEAYAALYKGRTKIMRLLF 60

Query: 61  IADRCGAETNQTMQLEALRMAYDEIKKGENALLFREVVPKIDGRLGPNYGMDAAWCEMVE 120
           IA+ CG   N  +Q +ALRMAYDEIKKGEN  LFREVV KI  RLG  YGMD AWCE V+
Sbjct: 61  IANHCGG--NHALQFDALRMAYDEIKKGENTQLFREVVNKIGNRLGEKYGMDLAWCEAVD 120

Query: 121 RRAEQRKDKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTS 180
           RRAEQ+K KLENEL++YRTNLIKESIRMGYNDFGDFYYA G LGDAFK+Y+RTRDYCTT+
Sbjct: 121 RRAEQKKVKLENELSSYRTNLIKESIRMGYNDFGDFYYACGMLGDAFKNYIRTRDYCTTT 180

Query: 181 KHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYK 240
           KHIIHMCM+AILVSIEMGQFTHVTSYV+KAEQ PE L+ + +AKLRCA+GLAHLE KKYK
Sbjct: 181 KHIIHMCMNAILVSIEMGQFTHVTSYVNKAEQNPETLEPMVNAKLRCASGLAHLELKKYK 240

Query: 241 LAARKFLETGPELGSHYNEVIAPQDVATYGGLCALATFDRSELKAHILCFFFLLITFPME 300
           LAARKFL+  PELG+ YNEVIAPQD+ATYGGLCALA+FDRSELK  +      +      
Sbjct: 241 LAARKFLDVNPELGNSYNEVIAPQDIATYGGLCALASFDRSELKQKV------IDNINFR 300

Query: 301 RKAKLVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQY 360
              +LVP VRELINDFYSS YASCL+YL +LK NLLLDIHLHDHV+TLYDQIR KALIQY
Sbjct: 301 NFLELVPDVRELINDFYSSRYASCLEYLASLKSNLLLDIHLHDHVDTLYDQIRKKALIQY 360

Query: 361 TLPFVSVDLHMMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQ 420
           TLPFVSVDL  MA+AFKTSV+GLEKELE LIT+NQIQARIDSHNKILYARHADQRNATFQ
Sbjct: 361 TLPFVSVDLSRMADAFKTSVSGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQ 420

Query: 421 RVLQTGSEFDREVRSMLLRANLIKHDYNQRGGSR 455
           +VLQ G+EFDR+VR+MLLRANL+KH+Y+ R   +
Sbjct: 421 KVLQMGNEFDRDVRAMLLRANLLKHEYHARSARK 440

[Close]

BLAST of Clc05G02470 vs. TAIR 10
Match: AT3G12850.1 (COP9 signalosome complex-related / CSN complex-related )

HSP 1 Score: 84.7 bits (208), Expect = 2.1e-16
Identity = 82/324 (25.31%), Postives = 130/324 (40.12%), Query Frame = 0


Query: 40  LDIEAYASLYSGRTKITRLIFIADR-CGAETNQTMQLEALRMAYDEIKKGE---NALLFR 99
           LD+EAY+  Y GR  + RL+ IA+   G      ++LEALR+AYD I+      +  LF 
Sbjct: 11  LDVEAYSRNYEGRNLVLRLLHIAENSVGPMFTDDLELEALRLAYDLIRNDGIVCDMRLFT 70

Query: 100 EVVPKIDGRLGPNYGMDAAWCEMVERRAEQRKDKLENELNAYRTNLIKESIRMGYNDFGD 159
            +  KI GRLG  Y +D  W         ++   L N+L +    L K+  R+    +  
Sbjct: 71  VIAEKIQGRLGEGYLLDEKWRLTKNNNFVKQDSILRNDLESATDELEKD--RLALRQYW- 130

Query: 160 FYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPE 219
            +Y  G +   F+ Y R           I   M+ +LV++E   F  +       EQ   
Sbjct: 131 LHYHCGQMAIVFRPYPR-------QVQTIDAYMATLLVALETRNFGELPH--RSVEQIAY 190

Query: 220 A-LDAITSAKLRCAAGLAHLEAKKYKLAAR-----KFLETGPELGSHYNEVIAPQDVATY 279
             +      K+ C   L++L   KY++ A        +    ++ SH   VI P     Y
Sbjct: 191 CNVKRAYGFKIDCFKSLSNLLESKYQVTAEGNAVDTIVNPIGQVASHLENVIKPFGPCDY 250

Query: 280 GGLCALATFDRSELKAHILCFFFLLITFPMERKAKLVPVVRELINDFYSSHYASCLDYLG 339
                                              L+ V+++L+    + H+  C+  L 
Sbjct: 251 -----------------------------------LIDVIKKLL----AGHFTDCMTLLE 283

Query: 340 NLKPNLLLDIHLHDHVETLYDQIR 354
             +P LLLD +L DHV+ L   +R
Sbjct: 311 KQRPRLLLDFYLRDHVDNLLSMMR 283

The following BLAST results are available for this feature:

BLAST of Clc05G02470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438090.1	1.5e-242	94.30	PREDICTED: COP9 signalosome complex subunit 1 [Cucumis melo]	[more]
XP_038897066.1	9.6e-242	94.08	LOW QUALITY PROTEIN: COP9 signalosome complex subunit 1 [Benincasa hispida]	[more]
XP_004133880.1	1.3e-241	93.86	COP9 signalosome complex subunit 1 [Cucumis sativus] >KGN56548.1 hypothetical pr...	[more]
XP_023539767.1	2.4e-240	93.64	COP9 signalosome complex subunit 1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6597162.1	5.3e-240	93.42	COP9 signalosome complex subunit 1, partial [Cucurbita argyrosperma subsp. soror...	[more]

BLAST of Clc05G02470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P45432	4.3e-184	72.69	COP9 signalosome complex subunit 1 OS=Arabidopsis thaliana OX=3702 GN=CSN1 PE=1 ...	[more]
Q54QX3	2.7e-106	47.65	COP9 signalosome complex subunit 1 OS=Dictyostelium discoideum OX=44689 GN=csn1 ...	[more]
Q6NRT5	5.9e-93	43.33	COP9 signalosome complex subunit 1 OS=Xenopus laevis OX=8355 GN=csn1 PE=2 SV=1	[more]
Q99LD4	2.2e-92	44.27	COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1	[more]
P97834	5.0e-92	44.04	COP9 signalosome complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Gps1 PE=1 SV...	[more]

BLAST of Clc05G02470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AV75	7.2e-243	94.30	COP9 signalosome complex subunit 1 OS=Cucumis melo OX=3656 GN=LOC103483302 PE=4 ...	[more]
A0A0A0L4A8	6.1e-242	93.86	PCI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G123210 PE=4 SV...	[more]
A0A6J1IK85	5.7e-240	93.42	COP9 signalosome complex subunit 1-like OS=Cucurbita maxima OX=3661 GN=LOC111474...	[more]
A0A6J1FHU8	5.7e-240	93.20	COP9 signalosome complex subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1EEU1	2.0e-237	91.89	COP9 signalosome complex subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111431883...	[more]

BLAST of Clc05G02470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61140.1	3.0e-185	72.69	26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain	[more]
AT3G12850.1	2.1e-16	25.31	COP9 signalosome complex-related / CSN complex-related	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 116..147
None	No IPR available	SMART	SM00753	PINT	coord: 343..426 e-value: 1.9E-19 score: 80.6
None	No IPR available	GENE3D	1.25.40.570		coord: 38..393 e-value: 1.3E-146 score: 490.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	PANTHER	PTHR14145:SF5	BNAA09G38820D PROTEIN	coord: 15..451
IPR000717	Proteasome component (PCI) domain	SMART	SM00088	PINT_4	coord: 343..426 e-value: 1.9E-19 score: 80.6
IPR000717	Proteasome component (PCI) domain	PFAM	PF01399	PCI	coord: 308..409 e-value: 3.2E-17 score: 63.0
IPR000717	Proteasome component (PCI) domain	PROSITE	PS50250	PCI	coord: 238..414 score: 19.497948
IPR045135	26S proteasome regulatory subunit Rpn7, N-terminal	PFAM	PF10602	RPN7	coord: 112..285 e-value: 2.6E-53 score: 180.3
IPR019585	26S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1	PANTHER	PTHR14145	26S PROTESOME SUBUNIT 6	coord: 15..451
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 338..418

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G02470.2	Clc05G02470.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0008180	COP9 signalosome
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0000502	proteasome complex