Clc05G02330 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G02330
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	LIM domain-containing protein PLIM2c-like
Location	ClcChr05: 1580271 .. 1582066 (+)
RNA-Seq Expression	Clc05G02330
Synteny	Clc05G02330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTCACAGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTCGTTGATTTGTTGTCCCTTGAAGGGAATCCTTATCATAAGCATTGCTTCAAATGCAGCCACTGCAAAGGCACCCTTTCGGTTAGTCTTTCTATATTCAATCTCTTTTACTTATTTCAATTCCAAATCCCATCATTCGAATTTGGCGGATTTTATCCCATTAGTTTGTTTATCACAGATGAGCAGCTACTCGTGGATGGATGGTGTCCTGTTTTGCAAGACTCATTTCGAGCAGCTCTTTAAGGAATCTGGAAATTTCAGCAAGAACTTTCAAAGTAGTAGTACAACATTTCTTTCCATTTCTCCCATTTTTGTTTTTGCTTGTTCCTTTTTTACTTTTTCCTTATTTCCTGACATTCTCTCATTCCCATGGTATTGAATGACAACAGCCAAACCTTCTGAGAAGCAAAATGATCTGGTATGCTCCCACTATTTTCACTTTTCTCAGGTTAGGTCAGCCAGATTATGACTAGCAATTTTGTGTTGGATGTATGAGAGAGTAACTGCAAAAGTTTGGTTGTTATTATTAGGCGCCAAATTTTCGTATTCATACCTAATGGTTATTAGGATAAAGTCCCATTTTGGCGGCTTCATCCAATAATTTTTCCTCCAAGTCATGGTTTTGAATATACCATTCCTAATATTTTTGATAAAAACAAACTGGGCTGGGAATTCTTGTACTTGTATGATTGTGATTTTGTTTCTTATTATAGAGCTTGCTCTTGAGTCTAATGGTGATATAATATGTCATGAGAATAGGAAGCCTTTAAATTAAAATTCCTATGATATCATTTTATCCTCATTTCCATATTTGGTAGTTTATGTATTAGCAATTTCAACCTTGTGCTCTCCATGCAAATGCTGTAATTTTTGCATAGTATTACAATCTTCATTATCTTTGACAGACAAGGACCCCCAGCAAACTCTCCTCCATGTTCTCTGGAACTCAAGATAAATGTGCTGTTTGCACTAAAACAGTTTATCCATTAGAGAAGGTCTGTAGCTCTTCATCTTGTATAATAACGTTGTTACTGAATTGTTGTTTGATTGAAACCTATAAGTTGTTAAAAATGTGAAAGGAAAACTCTGTGCTTGTTTGGAATGACATTTTAAGTGTTTAGAAAATTTTTTCTAAACACTTAAAATGTCATTCCAAATAAGCTGATATATGGTTAGGGAAATTGAAATTGTATTTTTGTTGGTTCCTGAATAGGTGACTCTGGAGGGGGAATGCTACCACAAGAAGTGCTTTAGATGTGCTCATGGTGGATGCCATTTGACACACTCTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAGCTCTTCCTGGTCAAAGGCAACTATAACCATGTCCTTGAAGCTGCTGCAAACAAGAAAAATACCATGCCCCCGGCCGAACATGCGGAAGAAGATGCCGAGCCTCAGCCTCAATCCGAGGAACACGCAGTAGAGCAATCTTAAAATGCTTTTTCTGCTCTACCAGCAATTTGAGAATTCTTCTTCGCTTTATTCATTCTTATAAAAGAAAACAAAAATTATTTTCTGTTTGGAAAGAGAACCATTTGTTTTTCTTCACATTCACATTGACTTCCAATTTATAATGTAATTGAAGACACTATTTATGTCAGCCAGATAAATAGATCCTTCAAAGCATTGCACCATATATTTCTGGGTGAATGAGAAGCTGGAATAAAAAGCAGATCTGCTGCAATCTCAAATATCA

mRNA sequence

ATGGCTTTCACAGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTCGTTGATTTGTTGTCCCTTGAAGGGAATCCTTATCATAAGCATTGCTTCAAATGCAGCCACTGCAAAGGCACCCTTTCGATGAGCAGCTACTCGTGGATGGATGGTGTCCTGTTTTGCAAGACTCATTTCGAGCAGCTCTTTAAGGAATCTGGAAATTTCAGCAAGAACTTTCAAACCAAACCTTCTGAGAAGCAAAATGATCTGGTATGCTCCCACTATTTTCACTTTTCTCAGACAAGGACCCCCAGCAAACTCTCCTCCATGTTCTCTGGAACTCAAGATAAATGTGCTGTTTGCACTAAAACAGTTTATCCATTAGAGAAGGTGACTCTGGAGGGGGAATGCTACCACAAGAAGTGCTTTAGATGTGCTCATGGTGGATGCCATTTGACACACTCTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAGCTCTTCCTGGTCAAAGGCAACTATAACCATGTCCTTGAAGCTGCTGCAAACAAGAAAAATACCATGCCCCCGGCCGAACATGCGGAAGAAGATGCCGAGCCTCAGCCTCAATCCGAGGAACACGCAGTAGAGCAATCTTAAAATGCTTTTTCTGCTCTACCAGCAATTTGAGAATTCTTCTTCGCTTTATTCATTCTTATAAAAGAAAACAAAAATTATTTTCTGTTTGGAAAGAGAACCATTTGTTTTTCTTCACATTCACATTGACTTCCAATTTATAATGTAATTGAAGACACTATTTATGTCAGCCAGATAAATAGATCCTTCAAAGCATTGCACCATATATTTCTGGGTGAATGAGAAGCTGGAATAAAAAGCAGATCTGCTGCAATCTCAAATATCA

Coding sequence (CDS)

ATGGCTTTCACAGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTCGTTGATTTGTTGTCCCTTGAAGGGAATCCTTATCATAAGCATTGCTTCAAATGCAGCCACTGCAAAGGCACCCTTTCGATGAGCAGCTACTCGTGGATGGATGGTGTCCTGTTTTGCAAGACTCATTTCGAGCAGCTCTTTAAGGAATCTGGAAATTTCAGCAAGAACTTTCAAACCAAACCTTCTGAGAAGCAAAATGATCTGGTATGCTCCCACTATTTTCACTTTTCTCAGACAAGGACCCCCAGCAAACTCTCCTCCATGTTCTCTGGAACTCAAGATAAATGTGCTGTTTGCACTAAAACAGTTTATCCATTAGAGAAGGTGACTCTGGAGGGGGAATGCTACCACAAGAAGTGCTTTAGATGTGCTCATGGTGGATGCCATTTGACACACTCTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAGCTCTTCCTGGTCAAAGGCAACTATAACCATGTCCTTGAAGCTGCTGCAAACAAGAAAAATACCATGCCCCCGGCCGAACATGCGGAAGAAGATGCCGAGCCTCAGCCTCAATCCGAGGAACACGCAGTAGAGCAATCTTAA

Protein sequence

MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQTKPSEKQNDLVCSHYFHFSQTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHVLEAAANKKNTMPPAEHAEEDAEPQPQSEEHAVEQS

Homology

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BLAST of Clc05G02330 vs. NCBI nr
Match: XP_038891791.1 (LIM domain-containing protein PLIM2b-like isoform X2 [Benincasa hispida])

HSP 1 Score: 407.1 bits (1045), Expect = 9.2e-110
Identity = 195/215 (90.70%), Postives = 199/215 (92.56%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHK CFKCSHCKGTLSMSSYSWMDGVLFCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQNDLVCSHYFHFSQTRTPSKLSSMFSGTQDKCAVCTK 120
           HFEQLFKESGNFSKNFQTKPSEKQ++L          TRTPSKLSSMFSGTQDKCAVCTK
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSEKQSEL----------TRTPSKLSSMFSGTQDKCAVCTK 120

Query: 121 TVYPLEKVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHV 180
           TVYPLEKVTLEGECYHK CFRCAHGGCHLTH SYAALDGVLYCKHHFAQLF+VKGNYNHV
Sbjct: 121 TVYPLEKVTLEGECYHKNCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHV 180

Query: 181 LEAAANKKNTMPPAEHAEEDAEPQPQSEEHAVEQS 216
           LEAAANKK T PPAEH EEDA+PQPQSEEHAVEQS
Sbjct: 181 LEAAANKKTTTPPAEHGEEDADPQPQSEEHAVEQS 205

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BLAST of Clc05G02330 vs. NCBI nr
Match: XP_038891725.1 (LIM domain-containing protein PLIM2b-like isoform X1 [Benincasa hispida])

HSP 1 Score: 402.5 bits (1033), Expect = 2.3e-108
Identity = 195/216 (90.28%), Postives = 199/216 (92.13%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHK CFKCSHCKGTLSMSSYSWMDGVLFCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60

Query: 61  HFEQLFKESGNFSKNFQ-TKPSEKQNDLVCSHYFHFSQTRTPSKLSSMFSGTQDKCAVCT 120
           HFEQLFKESGNFSKNFQ TKPSEKQ++L          TRTPSKLSSMFSGTQDKCAVCT
Sbjct: 61  HFEQLFKESGNFSKNFQSTKPSEKQSEL----------TRTPSKLSSMFSGTQDKCAVCT 120

Query: 121 KTVYPLEKVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNH 180
           KTVYPLEKVTLEGECYHK CFRCAHGGCHLTH SYAALDGVLYCKHHFAQLF+VKGNYNH
Sbjct: 121 KTVYPLEKVTLEGECYHKNCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNH 180

Query: 181 VLEAAANKKNTMPPAEHAEEDAEPQPQSEEHAVEQS 216
           VLEAAANKK T PPAEH EEDA+PQPQSEEHAVEQS
Sbjct: 181 VLEAAANKKTTTPPAEHGEEDADPQPQSEEHAVEQS 206

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BLAST of Clc05G02330 vs. NCBI nr
Match: XP_022980415.1 (LIM domain-containing protein PLIM2b-like [Cucurbita maxima])

HSP 1 Score: 399.1 bits (1024), Expect = 2.5e-107
Identity = 190/215 (88.37%), Postives = 199/215 (92.56%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLLSLEG PYHKHCFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQNDLVCSHYFHFSQTRTPSKLSSMFSGTQDKCAVCTK 120
           HFEQLFKESGNFSKNFQTKPSEKQ++L          TRTPSKLS+MFSGTQDKC+VCTK
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSEKQSEL----------TRTPSKLSTMFSGTQDKCSVCTK 120

Query: 121 TVYPLEKVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHV 180
           TVYPLEKVTLEGECYHK CFRCAHGGCHLTH SYAALDGVLYCKHHF+QLF+VKGNYNHV
Sbjct: 121 TVYPLEKVTLEGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHV 180

Query: 181 LEAAANKKNTMPPAEHAEEDAEPQPQSEEHAVEQS 216
           LEAAANKKNT PPA+ AEEDAE QPQSE+HAVEQS
Sbjct: 181 LEAAANKKNTTPPADRAEEDAESQPQSEDHAVEQS 205

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BLAST of Clc05G02330 vs. NCBI nr
Match: XP_022924601.1 (LIM domain-containing protein PLIM2c-like [Cucurbita moschata] >XP_023526639.1 LIM domain-containing protein PLIM2c-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 398.3 bits (1022), Expect = 4.3e-107
Identity = 190/215 (88.37%), Postives = 198/215 (92.09%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLLSLEG PYHKHCFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQNDLVCSHYFHFSQTRTPSKLSSMFSGTQDKCAVCTK 120
           HFEQLFKESGNFSKNFQTKPSEKQ++L          TRTPSKLSSMFSGTQDKC+VCTK
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSEKQSEL----------TRTPSKLSSMFSGTQDKCSVCTK 120

Query: 121 TVYPLEKVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHV 180
           TVYPLEKVTLEGECYHK CFRCAHGGCHLTH SYAALDGVLYCKHHF+QLF+VKGNYNHV
Sbjct: 121 TVYPLEKVTLEGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHV 180

Query: 181 LEAAANKKNTMPPAEHAEEDAEPQPQSEEHAVEQS 216
           LEAAANKKN  PPA+ AEEDAE QPQSE+HAVEQS
Sbjct: 181 LEAAANKKNATPPADRAEEDAESQPQSEDHAVEQS 205

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BLAST of Clc05G02330 vs. NCBI nr
Match: XP_008438068.1 (PREDICTED: LIM domain-containing protein PLIM2b-like [Cucumis melo])

HSP 1 Score: 397.1 bits (1019), Expect = 9.5e-107
Identity = 189/215 (87.91%), Postives = 197/215 (91.63%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHK+CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQNDLVCSHYFHFSQTRTPSKLSSMFSGTQDKCAVCTK 120
           HFEQLFKESGNFSKNFQTKPSE+QNDL          TRTPSKLSSMF GTQDKC+VCTK
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSERQNDL----------TRTPSKLSSMFCGTQDKCSVCTK 120

Query: 121 TVYPLEKVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHV 180
           TVYPLEKVTLEGECYHKKCFRCAHGGCHLTH SYAALDGVLYCKHHFAQLF+VKGNYNHV
Sbjct: 121 TVYPLEKVTLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHV 180

Query: 181 LEAAANKKNTMPPAEHAEEDAEPQPQSEEHAVEQS 216
           LEAAANKK T PPAEH +EDAEP P+S E AVEQS
Sbjct: 181 LEAAANKKTTTPPAEHTDEDAEPSPRSGEQAVEQS 205

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BLAST of Clc05G02330 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 8.7e-79
Identity = 144/216 (66.67%), Postives = 167/216 (77.31%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGTLDKCKACDKTVYV+DLL+LEGN YHK CF+C+HCKGTL +S+YS MDGVL+CK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQNDLVCSHYFHFSQTRTPSKLSSMFSGTQDKCAVCTK 120
           HFEQLFKESGN+SKNFQ   +EK ND +         TRTPSKLSS FSGTQDKCA C K
Sbjct: 61  HFEQLFKESGNYSKNFQAGKTEKPNDHL---------TRTPSKLSSFFSGTQDKCATCKK 120

Query: 121 TVYPLEKVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHV 180
           TVYPLEKVT+EGE YHK CFRC H GC LTHSSYA+L+GVLYCK HF QLFL KG+YNHV
Sbjct: 121 TVYPLEKVTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHV 180

Query: 181 LEAAANKKNTM-------PPAEHAEEDAEPQPQSEE 210
            +AAAN + +        P  +H  +D    P+++E
Sbjct: 181 HQAAANHRRSASSGGASPPSDDHKPDDTASIPEAKE 207

[Close]

BLAST of Clc05G02330 vs. ExPASy Swiss-Prot
Match: Q1ECF5 (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.5e-78
Identity = 143/219 (65.30%), Postives = 168/219 (76.71%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGTLDKC  CDKTVYVVD+LS+EG PYHK CF+C+HCKGTL MS+YS MDGVL+CKT
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQNDLVCSHYFHFSQTRTPSKLSSMFSGTQDKCAVCTK 120
           HFEQLFKESGNFSKNFQ   +EK              TRTPSK+SS+F GTQDKCA C K
Sbjct: 61  HFEQLFKESGNFSKNFQPGKTEKP-----------ELTRTPSKISSIFCGTQDKCAACEK 120

Query: 121 TVYPLEKVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHV 180
           TVYPLEK+ +EGEC+HK CFRCAHGGC LTHSSYA+LD VLYC+HHF QLF+ KGNY HV
Sbjct: 121 TVYPLEKIQMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHV 180

Query: 181 LEAAANKK----NTMPPAEHAEEDAEPQPQSEEHAVEQS 216
           L+AA +++    NT+PP    +   E +   EE+ V +S
Sbjct: 181 LQAANHRRTASGNTLPPEPTEDVAVEAK---EENGVSES 205

[Close]

BLAST of Clc05G02330 vs. ExPASy Swiss-Prot
Match: Q500W4 (LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C PE=1 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 3.3e-78
Identity = 145/214 (67.76%), Postives = 165/214 (77.10%), Query Frame = 0


Query: 2   AFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKTH 61
           AFTGT DKCKACDKTVYV+DL++LEG PYHK CF+CSHC GTL + +YS MDGVL+CKTH
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQTK-PSEKQNDLVCSHYFHFSQTRTPSKLSSMFSGTQDKCAVCTK 121
           FEQLFKESGNFSKNFQT   +EK ND           T+ P++LSS FSGTQDKCA C K
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSND----------ATKAPNRLSSFFSGTQDKCAACKK 122

Query: 122 TVYPLEKVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHV 181
           TVYPLEK+T+EGE YHK CFRCAH GC LTHSSYAALDGVLYCK HF+QLFL KGNYNHV
Sbjct: 123 TVYPLEKMTMEGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHV 182

Query: 182 LEAAANKKNTMPPAEHAEEDAEPQPQSEEHAVEQ 215
           L+AAAN + +      AEED     + E +  E+
Sbjct: 183 LQAAANHRRST-----AEEDKTEPKEDEANPTEE 201

[Close]

BLAST of Clc05G02330 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 4.8e-69
Identity = 118/190 (62.11%), Postives = 152/190 (80.00%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGT  KC+AC+KTVY V+LLS +G  YHK CFKCSHCK  L +S+YS M+GV++C+ 
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQNDLVCSHYFHFSQTRTPSKLSSMFSGTQDKCAVCTK 120
           HFEQLFKESG+FSKNFQ+ P++   D            RTPS+L+ MFSGTQDKCA CTK
Sbjct: 61  HFEQLFKESGSFSKNFQS-PAKPLTDKPTPEL-----NRTPSRLAGMFSGTQDKCATCTK 120

Query: 121 TVYPLEKVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHV 180
           TVYP+EKVT+E +CYHK CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH+
Sbjct: 121 TVYPIEKVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 180

Query: 181 LEAAANKKNT 191
           +++A+ K+ T
Sbjct: 181 IKSASIKRAT 184

[Close]

BLAST of Clc05G02330 vs. ExPASy Swiss-Prot
Match: Q7F9R9 (LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.1e-68
Identity = 126/205 (61.46%), Postives = 148/205 (72.20%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGT DKC ACDKTV+ +DLL+ +G PYHK CFKCSHCKG LSM SYS MDGVL+CKT
Sbjct: 1   MSFTGTQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQNDLVCSHYFHFSQTRTPSKLSSMFSGTQDKCAVCTK 120
           HFEQLFKE+G+FSK F         +L           R PSK+ S FSGTQDKCA C K
Sbjct: 61  HFEQLFKETGSFSKKFAPGCRSTDKEL----------ARAPSKICSAFSGTQDKCAACQK 120

Query: 121 TVYPLEKVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHV 180
           TVYPLEK+TLEGE YHK CF+C+HGGC LT SSYAAL+GVLYCK HF QLF+ KG+YNH 
Sbjct: 121 TVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEKGSYNH- 180

Query: 181 LEAAANKKNTMPPAEHAEEDAEPQP 206
           ++  +  +  +P     E+ A P P
Sbjct: 181 MKKKSESQEVLPEVVPEEQPAPPPP 194

[Close]

BLAST of Clc05G02330 vs. ExPASy TrEMBL
Match: A0A6J1IW81 (LIM domain-containing protein PLIM2b-like OS=Cucurbita maxima OX=3661 GN=LOC111479790 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.2e-107
Identity = 190/215 (88.37%), Postives = 199/215 (92.56%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLLSLEG PYHKHCFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQNDLVCSHYFHFSQTRTPSKLSSMFSGTQDKCAVCTK 120
           HFEQLFKESGNFSKNFQTKPSEKQ++L          TRTPSKLS+MFSGTQDKC+VCTK
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSEKQSEL----------TRTPSKLSTMFSGTQDKCSVCTK 120

Query: 121 TVYPLEKVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHV 180
           TVYPLEKVTLEGECYHK CFRCAHGGCHLTH SYAALDGVLYCKHHF+QLF+VKGNYNHV
Sbjct: 121 TVYPLEKVTLEGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHV 180

Query: 181 LEAAANKKNTMPPAEHAEEDAEPQPQSEEHAVEQS 216
           LEAAANKKNT PPA+ AEEDAE QPQSE+HAVEQS
Sbjct: 181 LEAAANKKNTTPPADRAEEDAESQPQSEDHAVEQS 205

[Close]

BLAST of Clc05G02330 vs. ExPASy TrEMBL
Match: A0A6J1E9W7 (LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC111432043 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.1e-107
Identity = 190/215 (88.37%), Postives = 198/215 (92.09%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLLSLEG PYHKHCFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQNDLVCSHYFHFSQTRTPSKLSSMFSGTQDKCAVCTK 120
           HFEQLFKESGNFSKNFQTKPSEKQ++L          TRTPSKLSSMFSGTQDKC+VCTK
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSEKQSEL----------TRTPSKLSSMFSGTQDKCSVCTK 120

Query: 121 TVYPLEKVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHV 180
           TVYPLEKVTLEGECYHK CFRCAHGGCHLTH SYAALDGVLYCKHHF+QLF+VKGNYNHV
Sbjct: 121 TVYPLEKVTLEGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHV 180

Query: 181 LEAAANKKNTMPPAEHAEEDAEPQPQSEEHAVEQS 216
           LEAAANKKN  PPA+ AEEDAE QPQSE+HAVEQS
Sbjct: 181 LEAAANKKNATPPADRAEEDAESQPQSEDHAVEQS 205

[Close]

BLAST of Clc05G02330 vs. ExPASy TrEMBL
Match: A0A1S3AVG8 (LIM domain-containing protein PLIM2b-like OS=Cucumis melo OX=3656 GN=LOC103483289 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 4.6e-107
Identity = 189/215 (87.91%), Postives = 197/215 (91.63%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHK+CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQNDLVCSHYFHFSQTRTPSKLSSMFSGTQDKCAVCTK 120
           HFEQLFKESGNFSKNFQTKPSE+QNDL          TRTPSKLSSMF GTQDKC+VCTK
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSERQNDL----------TRTPSKLSSMFCGTQDKCSVCTK 120

Query: 121 TVYPLEKVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHV 180
           TVYPLEKVTLEGECYHKKCFRCAHGGCHLTH SYAALDGVLYCKHHFAQLF+VKGNYNHV
Sbjct: 121 TVYPLEKVTLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHV 180

Query: 181 LEAAANKKNTMPPAEHAEEDAEPQPQSEEHAVEQS 216
           LEAAANKK T PPAEH +EDAEP P+S E AVEQS
Sbjct: 181 LEAAANKKTTTPPAEHTDEDAEPSPRSGEQAVEQS 205

[Close]

BLAST of Clc05G02330 vs. ExPASy TrEMBL
Match: A0A0A0L6A8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122580 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 3.3e-105
Identity = 186/215 (86.51%), Postives = 196/215 (91.16%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHK+CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQNDLVCSHYFHFSQTRTPSKLSSMFSGTQDKCAVCTK 120
           HFEQLFKESGNFSKNFQTK S+K NDL          TRTPSKLSSMFSGTQDKC+VCTK
Sbjct: 61  HFEQLFKESGNFSKNFQTKSSDKPNDL----------TRTPSKLSSMFSGTQDKCSVCTK 120

Query: 121 TVYPLEKVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHV 180
           TVYPLEKV+LEGECYHKKCFRCAHGGCHLTH SYAALDGVLYCKHHFAQLF+VKGNYNHV
Sbjct: 121 TVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHV 180

Query: 181 LEAAANKKNTMPPAEHAEEDAEPQPQSEEHAVEQS 216
           LEAAANKK T PPA+H +EDAEP P+S E AVEQS
Sbjct: 181 LEAAANKKTTTPPADHTDEDAEPSPRSGEQAVEQS 205

[Close]

BLAST of Clc05G02330 vs. ExPASy TrEMBL
Match: A0A5D3D2N0 (LIM domain-containing protein PLIM2b-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004540 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 9.3e-100
Identity = 182/215 (84.65%), Postives = 189/215 (87.91%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHK+CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQNDLVCSHYFHFSQTRTPSKLSSMFSGTQDKCAVCTK 120
           HFEQLFKESGNFSKNFQ   S     L  S  F      TPSKLSSMF GTQDKC+VCTK
Sbjct: 61  HFEQLFKESGNFSKNFQ---SSSTTILPISPIFF---CLTPSKLSSMFCGTQDKCSVCTK 120

Query: 121 TVYPLEKVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHV 180
           TVYPLEKVTLEGECYHKKCFRCAHGGCHLTH SYAALDGVLYCKHHFAQLF+VKGNYNHV
Sbjct: 121 TVYPLEKVTLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHV 180

Query: 181 LEAAANKKNTMPPAEHAEEDAEPQPQSEEHAVEQS 216
           LEAAANKK T PPAEH +EDAEP P+S E AVEQS
Sbjct: 181 LEAAANKKTTTPPAEHTDEDAEPSPRSGEQAVEQS 209

[Close]

BLAST of Clc05G02330 vs. TAIR 10
Match: AT2G45800.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 294.7 bits (753), Expect = 6.2e-80
Identity = 144/216 (66.67%), Postives = 167/216 (77.31%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGTLDKCKACDKTVYV+DLL+LEGN YHK CF+C+HCKGTL +S+YS MDGVL+CK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQNDLVCSHYFHFSQTRTPSKLSSMFSGTQDKCAVCTK 120
           HFEQLFKESGN+SKNFQ   +EK ND +         TRTPSKLSS FSGTQDKCA C K
Sbjct: 61  HFEQLFKESGNYSKNFQAGKTEKPNDHL---------TRTPSKLSSFFSGTQDKCATCKK 120

Query: 121 TVYPLEKVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHV 180
           TVYPLEKVT+EGE YHK CFRC H GC LTHSSYA+L+GVLYCK HF QLFL KG+YNHV
Sbjct: 121 TVYPLEKVTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHV 180

Query: 181 LEAAANKKNTM-------PPAEHAEEDAEPQPQSEE 210
            +AAAN + +        P  +H  +D    P+++E
Sbjct: 181 HQAAANHRRSASSGGASPPSDDHKPDDTASIPEAKE 207

[Close]

BLAST of Clc05G02330 vs. TAIR 10
Match: AT1G01780.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 293.9 bits (751), Expect = 1.1e-79
Identity = 143/219 (65.30%), Postives = 168/219 (76.71%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGTLDKC  CDKTVYVVD+LS+EG PYHK CF+C+HCKGTL MS+YS MDGVL+CKT
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQNDLVCSHYFHFSQTRTPSKLSSMFSGTQDKCAVCTK 120
           HFEQLFKESGNFSKNFQ   +EK              TRTPSK+SS+F GTQDKCA C K
Sbjct: 61  HFEQLFKESGNFSKNFQPGKTEKP-----------ELTRTPSKISSIFCGTQDKCAACEK 120

Query: 121 TVYPLEKVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHV 180
           TVYPLEK+ +EGEC+HK CFRCAHGGC LTHSSYA+LD VLYC+HHF QLF+ KGNY HV
Sbjct: 121 TVYPLEKIQMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHV 180

Query: 181 LEAAANKK----NTMPPAEHAEEDAEPQPQSEEHAVEQS 216
           L+AA +++    NT+PP    +   E +   EE+ V +S
Sbjct: 181 LQAANHRRTASGNTLPPEPTEDVAVEAK---EENGVSES 205

[Close]

BLAST of Clc05G02330 vs. TAIR 10
Match: AT3G61230.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 292.7 bits (748), Expect = 2.3e-79
Identity = 145/214 (67.76%), Postives = 165/214 (77.10%), Query Frame = 0


Query: 2   AFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKTH 61
           AFTGT DKCKACDKTVYV+DL++LEG PYHK CF+CSHC GTL + +YS MDGVL+CKTH
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQTK-PSEKQNDLVCSHYFHFSQTRTPSKLSSMFSGTQDKCAVCTK 121
           FEQLFKESGNFSKNFQT   +EK ND           T+ P++LSS FSGTQDKCA C K
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSND----------ATKAPNRLSSFFSGTQDKCAACKK 122

Query: 122 TVYPLEKVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHV 181
           TVYPLEK+T+EGE YHK CFRCAH GC LTHSSYAALDGVLYCK HF+QLFL KGNYNHV
Sbjct: 123 TVYPLEKMTMEGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHV 182

Query: 182 LEAAANKKNTMPPAEHAEEDAEPQPQSEEHAVEQ 215
           L+AAAN + +      AEED     + E +  E+
Sbjct: 183 LQAAANHRRST-----AEEDKTEPKEDEANPTEE 201

[Close]

BLAST of Clc05G02330 vs. TAIR 10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 262.3 bits (669), Expect = 3.4e-70
Identity = 118/190 (62.11%), Postives = 152/190 (80.00%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGT  KC+AC+KTVY V+LLS +G  YHK CFKCSHCK  L +S+YS M+GV++C+ 
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQNDLVCSHYFHFSQTRTPSKLSSMFSGTQDKCAVCTK 120
           HFEQLFKESG+FSKNFQ+ P++   D            RTPS+L+ MFSGTQDKCA CTK
Sbjct: 61  HFEQLFKESGSFSKNFQS-PAKPLTDKPTPEL-----NRTPSRLAGMFSGTQDKCATCTK 120

Query: 121 TVYPLEKVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHV 180
           TVYP+EKVT+E +CYHK CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH+
Sbjct: 121 TVYPIEKVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 180

Query: 181 LEAAANKKNT 191
           +++A+ K+ T
Sbjct: 181 IKSASIKRAT 184

[Close]

BLAST of Clc05G02330 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 255.0 bits (650), Expect = 5.4e-68
Identity = 115/191 (60.21%), Postives = 151/191 (79.06%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGT  KCKAC+KTVY V+LLS +G  YHK CFKC+HCK  L +SSYS M+GVL+CK 
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQT--KPSEKQNDLVCSHYFHFSQTRTPSKLSSMFSGTQDKCAVC 120
           HFEQLFKESG+F+KNFQ+  K ++K              TRTPS+++  FSGTQ+KCA C
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTP---------ELTRTPSRVAGRFSGTQEKCATC 120

Query: 121 TKTVYPLEKVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYN 180
           +KTVYP+EKVT+E + YHK CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YN
Sbjct: 121 SKTVYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYN 180

Query: 181 HVLEAAANKKN 190
           H++++A+ K++
Sbjct: 181 HLIKSASIKRS 182

The following BLAST results are available for this feature:

BLAST of Clc05G02330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891791.1	9.2e-110	90.70	LIM domain-containing protein PLIM2b-like isoform X2 [Benincasa hispida]	[more]
XP_038891725.1	2.3e-108	90.28	LIM domain-containing protein PLIM2b-like isoform X1 [Benincasa hispida]	[more]
XP_022980415.1	2.5e-107	88.37	LIM domain-containing protein PLIM2b-like [Cucurbita maxima]	[more]
XP_022924601.1	4.3e-107	88.37	LIM domain-containing protein PLIM2c-like [Cucurbita moschata] >XP_023526639.1 L...	[more]
XP_008438068.1	9.5e-107	87.91	PREDICTED: LIM domain-containing protein PLIM2b-like [Cucumis melo]	[more]

BLAST of Clc05G02330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80839	8.7e-79	66.67	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]
Q1ECF5	1.5e-78	65.30	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P...	[more]
Q500W4	3.3e-78	67.76	LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C P...	[more]
O04193	4.8e-69	62.11	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
Q7F9R9	3.1e-68	61.46	LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]

BLAST of Clc05G02330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IW81	1.2e-107	88.37	LIM domain-containing protein PLIM2b-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1E9W7	2.1e-107	88.37	LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A1S3AVG8	4.6e-107	87.91	LIM domain-containing protein PLIM2b-like OS=Cucumis melo OX=3656 GN=LOC10348328...	[more]
A0A0A0L6A8	3.3e-105	86.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122580 PE=4 SV=1	[more]
A0A5D3D2N0	9.3e-100	84.65	LIM domain-containing protein PLIM2b-like OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of Clc05G02330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45800.1	6.2e-80	66.67	GATA type zinc finger transcription factor family protein	[more]
AT1G01780.1	1.1e-79	65.30	GATA type zinc finger transcription factor family protein	[more]
AT3G61230.1	2.3e-79	67.76	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	3.4e-70	62.11	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.1	5.4e-68	60.21	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 114..166 e-value: 2.9E-12 score: 56.7 coord: 9..61 e-value: 3.1E-11 score: 53.3
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 10..65 e-value: 1.2E-11 score: 44.6 coord: 115..170 e-value: 3.8E-10 score: 39.8
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 113..173 score: 12.1474
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 8..68 score: 13.1671
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 109..179 e-value: 3.5E-18 score: 67.5 coord: 6..74 e-value: 6.6E-18 score: 66.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..215
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 1..210
None	No IPR available	PANTHER	PTHR24206:SF69	LIM DOMAIN-CONTAINING PROTEIN PLIM2C	coord: 1..210
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 107..140
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 36..76
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 141..180
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 2..35

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G02330.2	Clc05G02330.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding