Clc05G00990 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAGCAGATTTTATTGATGAAGAAGGTAGCAGATTTAATTACATGTTGGCAACTAACATAAGAAAAAACATGTAATTACGCTAAGAAAGATGCAAACCTACTCCATGAAAAAATAGGCTCAATTTTAAAAATAAAAAAACAAATAAAATGGATACCAAATGCGACATTAGATATTGATACAAAGATTCCAACCAACATGTTTTTTTTTTATGGTAGCAGATTTTATAAACATGTTATTTATTTATTTATTTATTTATTTTTTGTTAATTTAATATCATGGAAAATGGAAAAAAGAACTCAATGCGCGTAATATCGGCGCCAAAGGACGCGCGTGAGGATTCTTTCGTTCGTCTGTGTTTGCTCTGCGCTGCTGTCCGTCTCCATTCTTCTCCATCGGCTTCGTTCGAACCCTAAATCAATTCACTCTCAGTCTTGCTCTATGGATATCACTGAAGAGCAGCGAAAGCGAGCCGAAGCAAACCGTTTAGCTGCCGCATCCAAACGCAAAGCACTGGTTGAAGCTTTTCAAATGTCGTAAGCTTTCCACTGAACTTAATACTGCGAGTTCCGTCCATTCATCGAAAAACTTATCCTACAACAACACTCATTTGCCTCAAAGGTTCCAAGTAAGGTTGGAAATTTTCTCCCCAGACTCGTTCTCGTTCACTGTCTTTGTTTTGCGCGTCTCGACGATAAGAAATCAGTGGAAAAACTCGATACCTTTTGGATTTTGTAGGCATTTTTCATTTAATTGTCTTCTGAACGGGAGAACTTGTGATTTGTAGTAGCCTTACTTTTTATTCCCTCTGCATTTGTCTAGCTCGCTCGGATATTTCTTTTGGTTTACTTGATTGCCTGGCTTATCCGGTTTCACCCAGTTCCACTGCGTACCTTAGAGAGTGATAGACGATATATTTAAAATTTTCAACAATTCTTTATTTTCGAAGTAAAATGGGCATAAATCACTATGCTGTACATCATTATGAGTGTGTAGTTCATTTAATCATTGTGTTGTATGGTACCTTCGCTGAAGATTGGCAAGCGGCACTATTCTGTCGCCAGAAAATTCATGTAATATGGACTAATATGCTTCATTAGAAAGAATCAAGAGAACCTTGAAGGGCGTAGAGGGGTCTTGGGGGAGATCTGAATTGTGGTCCACTTCCTTCCTTTGGGCGTTGCCTGTAGAAATTATTTGTACTTTCTCGTTGTTTTGATTTATAATAATTGGAGTCAATTTCTTGTAATTGCGTAGTTTTGTTGTAGCAGGTTCCTTTGCCTTGAAATTTTTATGTGTGTTGGTCCTCTTTTTTGTATCTTCATTTATCATATATCCTGGTTTTTTGTTTAAGAAAAAGGATTAATAAGTTTGCATAGGGAGATGTGTTGTAACCTCTTGTGTTTTTGCACGGATAAATGCTGTTCTTGATTTAGCAACCAAGGTTCAGCATATTATTCTTCTATCTGGAACTCCCTTATCAAGGTTGCATCGTGGCTTTCTCAAAGTGAATTCTTTAATGGTCTTTTGAGTATGATGTCTTTTCTCACTGAAGACATGTCTATCAAATTATATCTTTTATTTTCCATTTTAATTTCTATTCATTATAACATCTCACTTTAAATTTACCTAGGTGATCTTAGGCCATATGATATTTTTCATCAGATAGACATGGTATGGAAATTTCTCTTCAACCTTTACATCTTAGATCTGAATTGGATGACTTATTCTATTTCTAATGATCTATTATGTCAGAAGTTCATTTGCTCAATTCTGTATTTATTGTAGGCCTGGTTTGCTTGGAAAGACCAAGTACGAGTTTGCAGAGACTTGCGCTGTCAAATTTGTCTCGACTTCTTAGGGGAAAACTTTTAAGGTACTGGTTGGACTTGAAATTCTTGTTGAAGAGCATTCTATCTTCTTATTCTCAAAGTTTAGAATCTTAATGTGGTGTTGTCTACAAAATTTTGAATGAAGAGGGAAAGGAGGGTAAAAAAGAAAGAAGAAACTAAAATGGTTGTTTCTTTTTGGATAATACAAGAGGATCAACTATTTGGAATGCTGTTTTTGTTGAGAAAAAAATCAAAGGATCTCACACTGTTTATGAGATATATGAGCTTCACCTCCCATTGCCAATTGGTTTTGAGATGGAATCCCAACGTGATCTAATAGTTTTATATTTCAACCTTATTTTGGCTTTTATTTAAGATTAATATTTACATTTAATATTGGACCTGTCGCCTACAGACTTGAGCTGCCACTTGACGTTAAGATACATGATGTCTTTCATATTGCGGCATTGCCCCAGCTGGTAGCCCCCTGGTTTTTGACCCCTTCCTTCTCTGCTCCTTTGAAACCAATGGCACTGTTGGGTTGGGTCTAAGACAAATAAAGTTTTCCACAAATAGGAAAGATGAGCTTGAAGTGTTGATACAGTGGGAAGGTGTTGGACTGGAAGATGCCACTTGGGAGTCCAGACAAATTCTGACTGAGCAATTTCCTGAGTTCCACCTTGAAGACAAAGTGGCTTGTTGGGGGGTGGGTAATGATAGACCCTCGATCAAGAAGGTGTAATATTTGAAAGAAAAATAGAGGAAAGGGAGGGGGAAATAGACAAAGCAATGTAATCAATAATAAATAAGAAGTAATTACATGAGAGTGGGAATGATGTGATTGTGTGGGGTCCATGGGATAATTCGGTTAGTTGAGATTTTTCCTTTTTAAGAGAGGTAGGGAGGCAGGCATTGATTATCTTTTTGACATTTTAGTGAATGTGTAGCTCTTTGAGCAAATTGAGAGAGGGGAAGGTCTCAAGCTTCCTTGGCGTTTAGCCTAAATAGTGAATATATAAGCTTGGGGCTCTGTCATATTTATGCTTCATTTTAAGGTACAAAGTTTAAATTTAGATAGAATTTCTGCTGCAGAACTTCTCAAAAGGCATTCGATTAGATGAGTTGAATGTGCTGCTCAAGCAAACTGTTATGGTGTGCGTTCATTCTCTCTATTACTTATGTTTGAGTAGACTGGACAATGCTGTTGTTGAAAAGTTCTGA ATGGTAGCAGATTTTATTGATGAAGAAGGATTCTTTCGTTCGTCTGTGTTTGCTCTGCGCTGCTGTCCGTCTCCATTCTTCTCCATCGGCTTCTCTTGCTCTATGGATATCACTGAAGAGCAGCGAAAGCGAGCCGAAGCAAACCGTTTAGCTGCCGCATCCAAACGCAAAGCACTGGTTGAAGCTTTTCAAATGTCACTCGTTCTCGTTCACTGTCTTTGTTTTGCGCGTCTCGACGATAAGAAATCAGTGGAAAAACTCGATACCTTTTGGATTTTTAGCCTTACTTTTTATTCCCTCTGCATTTGTCTAGCTCGCTCGGATATTTCTTTTGGTTTACTTGATTGCCTGGCTTATCCGGTTTCACCCAGTTCCACTGCGGGTCTTGGGGGAGATCTGAATTGTGGTCCACTTCCTTCCTTTGGGCGTTGCCTACTTGAGCTGCCACTTGACGTTAAGATACATGATGTCTTTCATATTGCGGCATTGCCCCAGCTGGTAGCCCCCTGGTTTTTGACCCCTTCCTTCTCTGCTCCTTTGAAACCAATGGCACTGTTGGGTTGGTGGGAAGGTGTTGGACTGGAAGATGCCACTTGGGAGTCCAGACAAATTCTGACTGAGCAATTTCCTGAGTTCCACCTTGAAGACAAAGTGGCTTGTTGGGGGGTGGGTAATGATAGACCCTCGATCAAGAAGAACTTCTCAAAAGGCATTCGATTAGATGAGTTGAATGTGCTGCTCAAGCAAACTGTTATGGTGTGCGTTCATTCTCTCTATTACTTATGTTTGAGTAGACTGGACAATGCTGTTGTTGAAAAGTTCTGA ATGGTAGCAGATTTTATTGATGAAGAAGGATTCTTTCGTTCGTCTGTGTTTGCTCTGCGCTGCTGTCCGTCTCCATTCTTCTCCATCGGCTTCTCTTGCTCTATGGATATCACTGAAGAGCAGCGAAAGCGAGCCGAAGCAAACCGTTTAGCTGCCGCATCCAAACGCAAAGCACTGGTTGAAGCTTTTCAAATGTCACTCGTTCTCGTTCACTGTCTTTGTTTTGCGCGTCTCGACGATAAGAAATCAGTGGAAAAACTCGATACCTTTTGGATTTTTAGCCTTACTTTTTATTCCCTCTGCATTTGTCTAGCTCGCTCGGATATTTCTTTTGGTTTACTTGATTGCCTGGCTTATCCGGTTTCACCCAGTTCCACTGCGGGTCTTGGGGGAGATCTGAATTGTGGTCCACTTCCTTCCTTTGGGCGTTGCCTACTTGAGCTGCCACTTGACGTTAAGATACATGATGTCTTTCATATTGCGGCATTGCCCCAGCTGGTAGCCCCCTGGTTTTTGACCCCTTCCTTCTCTGCTCCTTTGAAACCAATGGCACTGTTGGGTTGGTGGGAAGGTGTTGGACTGGAAGATGCCACTTGGGAGTCCAGACAAATTCTGACTGAGCAATTTCCTGAGTTCCACCTTGAAGACAAAGTGGCTTGTTGGGGGGTGGGTAATGATAGACCCTCGATCAAGAAGAACTTCTCAAAAGGCATTCGATTAGATGAGTTGAATGTGCTGCTCAAGCAAACTGTTATGGTGTGCGTTCATTCTCTCTATTACTTATGTTTGAGTAGACTGGACAATGCTGTTGTTGAAAAGTTCTGA MVADFIDEEGFFRSSVFALRCCPSPFFSIGFSCSMDITEEQRKRAEANRLAAASKRKALVEAFQMSLVLVHCLCFARLDDKKSVEKLDTFWIFSLTFYSLCICLARSDISFGLLDCLAYPVSPSSTAGLGGDLNCGPLPSFGRCLLELPLDVKIHDVFHIAALPQLVAPWFLTPSFSAPLKPMALLGWWEGVGLEDATWESRQILTEQFPEFHLEDKVACWGVGNDRPSIKKNFSKGIRLDELNVLLKQTVMVCVHSLYYLCLSRLDNAVVEKF Homology
BLAST of Clc05G00990 vs. NCBI nr
Match: KAA0039528.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK15281.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 73.9 bits (180), Expect = 2.3e-09 Identity = 45/115 (39.13%), Postives = 56/115 (48.70%), Query Frame = 0
BLAST of Clc05G00990 vs. NCBI nr
Match: TXG60193.1 (hypothetical protein EZV62_014766 [Acer yangbiense]) HSP 1 Score: 69.7 bits (169), Expect = 4.4e-08 Identity = 45/116 (38.79%), Postives = 57/116 (49.14%), Query Frame = 0
BLAST of Clc05G00990 vs. NCBI nr
Match: AEV42261.1 (hypothetical protein [Beta vulgaris]) HSP 1 Score: 68.6 bits (166), Expect = 9.8e-08 Identity = 51/160 (31.87%), Postives = 67/160 (41.88%), Query Frame = 0
BLAST of Clc05G00990 vs. NCBI nr
Match: EXC06937.1 (hypothetical protein L484_007617 [Morus notabilis]) HSP 1 Score: 68.2 bits (165), Expect = 1.3e-07 Identity = 38/98 (38.78%), Postives = 52/98 (53.06%), Query Frame = 0
BLAST of Clc05G00990 vs. NCBI nr
Match: TYJ99691.1 (hypothetical protein E5676_scaffold562G00860 [Cucumis melo var. makuwa]) HSP 1 Score: 67.0 bits (162), Expect = 2.9e-07 Identity = 42/108 (38.89%), Postives = 56/108 (51.85%), Query Frame = 0
BLAST of Clc05G00990 vs. ExPASy TrEMBL
Match: A0A5D3CTU6 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00600 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.1e-09 Identity = 45/115 (39.13%), Postives = 56/115 (48.70%), Query Frame = 0
BLAST of Clc05G00990 vs. ExPASy TrEMBL
Match: A0A0V0H6H4 (Putative ovule protein (Fragment) OS=Solanum chacoense OX=4108 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 9.6e-09 Identity = 39/112 (34.82%), Postives = 57/112 (50.89%), Query Frame = 0
BLAST of Clc05G00990 vs. ExPASy TrEMBL
Match: A0A5C7HSW3 (Chromo domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_014766 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 2.1e-08 Identity = 45/116 (38.79%), Postives = 57/116 (49.14%), Query Frame = 0
BLAST of Clc05G00990 vs. ExPASy TrEMBL
Match: G9FIF5 (Uncharacterized protein OS=Beta vulgaris OX=161934 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 4.8e-08 Identity = 51/160 (31.87%), Postives = 67/160 (41.88%), Query Frame = 0
BLAST of Clc05G00990 vs. ExPASy TrEMBL
Match: W9RSR4 (Chromo domain-containing protein OS=Morus notabilis OX=981085 GN=L484_007617 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 6.2e-08 Identity = 38/98 (38.78%), Postives = 52/98 (53.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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