Clc05G00850 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAGCACCAAGTAAAGCGGTGGGTTGTGAGAGAAAGAGAGAGGAGCGAGTAATGAGCGACCTCTCCATTGCAGCTCCAACTGAAAAACACCACCATTACAGCGCCTGCAACCCCATTCCTTCTGCTGCTCTTTACATTCTCATACCCCTTTTCATTTTGGGATTTTCCGTCTCCATTTTCGTCCTTGTTGTAGTTCACAACGCCTTCTTCTTCCTCTCTCTTCTCCTTCTATCCATCTTCCTCTCTGCTTTCGCCCTCTGGAATAACCTCAGCTTCTCTTCCAAAGCTGCAATACTCTCATTTCTTCACTCTTTTCCTGACTCCGACCTTACACTTGCTCGCGAAGGTCAACTCGTTAAGATTACAGGGGTATTCCTTCTCTTCAACCCCATTTCCTTTTTCTTTTTTTTTTTTTTTCTCCCTCTAATTTCTTTACCCTTTTCAGTTTCATGGGTAATTTTCGTAAGTACGTTGTATTTGCTCTGATGGGTGTGATTTGTTTCTGCATATTTTTGTTTCCCCCTTTCAGCAATTGCTATGAGAGGCTACTAGATTCTGCTTTGAAGTGAATGTTGGGAGCCCGTTTTCTTATTATTTGTTTTTTGATGTGTTTGTTGAGTACCAACGTTTTGTAGACTTGATTATTGTTAATATGCCTTTGGTATCCTAAGTAGGTTTGCTTATCCTAAAGTGAGTTTGCATTTGGATATGATGCGAGGCAGGCGGTTTCTTGTGTTTTTTCATGTGTTATCATCCCACCTATAAAATGCTTGCTTGTAACATTTTAATAGTTTAGGTACTCAAACCTTTGAGTTCGGAATGATTTTTGAAAAGGTGAAAAGTGTATTGAGCTCATTATAATCACTTTTTAAAATATTTATAGTGTTTGATTAGATATTTAAAAGTTATTAAACAAATCCCAGAATACTTAAAGAACGCTTTGAAGGTGCATCTTCCAAGAAAGTGTTTATGGGAGAAGTGTTTTGTTTAAAAGCATTTTCACGAGGAGGCGTCTTGAACTCAATTTTAGTTATTGGCTAGCTACTTCATTGGGAAAAAATTTGTTTTGAGCGGTAGTTTCTTGTGAGGACTAAACAATCATCCAGGTGATGGATTGGAATTATTAAAGGAGCTGACTGTATAATTTAACTTATTCCACCATGTATACAATTTGAACCGTGGTTGGAAGTACTTCTTATACGGGCTTGATGTTAGCTCTTTGGGGTTTGATTCATTCTTGTTTTTAAGTACATTCCAGGTGTGTTTGAGGATTTATGTTTACTGCTTTTTGTATTCAGTTTGCTTCGTGCGGGACAGTCTCCCTGGAATCATCCTATGAAAAGGCAACTGGGTGTATTTATGCATCTACCTCTTTATATGAATATAGAGGAATGCCCCTGATTTTTCAAAAGATAACTCAACCTTACTGTGGTTGGAGGTTAGCATACAGTGAGGTAAGCAAATTCTATTTCTTTGTTTTTATTGTTCTTTTGCAGCTATAAAGCAATGGAGGTTTTGTTTTTTTTCTGACCTTTTAAATTTTCTGCATACTTTTTCTTTCCCTCGATCGGTAGGCTAGGTCACTTTATATTGTTTGGAAGCTACCGCATGACGTGAAAGAATTGACATTTAGCTCCATTTTTCTTTATGGGTTTAATGGTTCCAGTTGTATTCATTATCTTGACACCCTGATCTGCTCATTTTGAGATTTTTATTTGAGCTGTATAATGAAGTTGAAGCATGGTTAGAGTTATCTATGTGGACCAAAAATGTAACATTGTTCTTTTCTGAAGAATCAAATTTGGGTTGATTAGCATAAGATTTTCAAATTAACTTGCTGCTGTTCTCTCCAAAATCCCTTAGTATGATACTGCTCAAAGGAATATATAAAGTTGAAAAACTATACTTGTTTAATGGAACTTCCTTTTTTGTAAGCCATCAAATTCAATATTTAATTTATTATTCTAAAGAATACAGAAAAGGAATCTTATAGAATATAACTTGTATTTCTAATCTTATGCATCAATGATATACCTTAATATCATTTTCTTTTTAGACATATAACACTAACATGAGGCAGGATTATCTGTCTATTCCCATCTTGAAAACTAGACAGATTGCACCTGTCAGTTTTCAACATGGGTATGTATTTTAAACTTTTAATATCGCGTGCTCGTTTTTCTTCCTGGCAGAGGTTTTCCACTGACTTCTACATAACTGATAGAAAAACTGGTATTAGAGCTATGGTAAGGGCTGGCCCCAGTAGTAAACTAGTTCCTCTTATTATTGAGAGCAAGCTTGTTAATACTACAAGGCACCGCAAGATTCTGTCTCCTTCCTTGAGAAAATGGCTGAGAGACAGAAACATTTCTACGGAAGCCCGAATACTTCGACTTGAAGAAGGGTAACCACTTATCGTGATAACACCTATTTATTTGACTATACTTGGCCATAATTTTAGTAGTTAATTCCATGTAATTTTAGCAGATATGTCCAGGAAGGCAGCTTTGTCTCTGTAATGGGAATGTTGCATAGGAATAACGGTCATATAACAATAGTTCAACCTCCAGAAGCAATCTCTACCGGATGTTTATGGCGGAAACTTCTCCTTCCCATTTACATTGATGGACTAGTTCTTGGGGTCTTACAGACGACTGGCCTTCCGCTCGGCCAGGGACCATTATGTCACCAAGGACAGTTTGCTGACATATGA ATGGTAGCACCAAGTAAAGCGGTGGGTTGTGAGAGAAAGAGAGAGGAGCGAGTAATGAGCGACCTCTCCATTGCAGCTCCAACTGAAAAACACCACCATTACAGCGCCTGCAACCCCATTCCTTCTGCTGCTCTTTACATTCTCATACCCCTTTTCATTTTGGGATTTTCCGTCTCCATTTTCGTCCTTGTTGTAGTTCACAACGCCTTCTTCTTCCTCTCTCTTCTCCTTCTATCCATCTTCCTCTCTGCTTTCGCCCTCTGGAATAACCTCAGCTTCTCTTCCAAAGCTGCAATACTCTCATTTCTTCACTCTTTTCCTGACTCCGACCTTACACTTGCTCGCGAAGGTCAACTCGTTAAGATTACAGGGTTTGCTTCGTGCGGGACAGTCTCCCTGGAATCATCCTATGAAAAGGCAACTGGGTGTATTTATGCATCTACCTCTTTATATGAATATAGAGGAATGCCCCTGATTTTTCAAAAGATAACTCAACCTTACTGTGGTTGGAGGTTAGCATACAGTGAGAGGTTTTCCACTGACTTCTACATAACTGATAGAAAAACTGGTATTAGAGCTATGGTAAGGGCTGGCCCCAGTAGTAAACTAGTTCCTCTTATTATTGAGAGCAAGCTTGTTAATACTACAAGGCACCGCAAGATTCTGTCTCCTTCCTTGAGAAAATGGCTGAGAGACAGAAACATTTCTACGGAAGCCCGAATACTTCGACTTGAAGAAGGATATGTCCAGGAAGGCAGCTTTGTCTCTGTAATGGGAATGTTGCATAGGAATAACGGTCATATAACAATAGTTCAACCTCCAGAAGCAATCTCTACCGGATGTTTATGGCGGAAACTTCTCCTTCCCATTTACATTGATGGACTAGTTCTTGGGGTCTTACAGACGACTGGCCTTCCGCTCGGCCAGGGACCATTATGTCACCAAGGACAGTTTGCTGACATATGA ATGGTAGCACCAAGTAAAGCGGTGGGTTGTGAGAGAAAGAGAGAGGAGCGAGTAATGAGCGACCTCTCCATTGCAGCTCCAACTGAAAAACACCACCATTACAGCGCCTGCAACCCCATTCCTTCTGCTGCTCTTTACATTCTCATACCCCTTTTCATTTTGGGATTTTCCGTCTCCATTTTCGTCCTTGTTGTAGTTCACAACGCCTTCTTCTTCCTCTCTCTTCTCCTTCTATCCATCTTCCTCTCTGCTTTCGCCCTCTGGAATAACCTCAGCTTCTCTTCCAAAGCTGCAATACTCTCATTTCTTCACTCTTTTCCTGACTCCGACCTTACACTTGCTCGCGAAGGTCAACTCGTTAAGATTACAGGGTTTGCTTCGTGCGGGACAGTCTCCCTGGAATCATCCTATGAAAAGGCAACTGGGTGTATTTATGCATCTACCTCTTTATATGAATATAGAGGAATGCCCCTGATTTTTCAAAAGATAACTCAACCTTACTGTGGTTGGAGGTTAGCATACAGTGAGAGGTTTTCCACTGACTTCTACATAACTGATAGAAAAACTGGTATTAGAGCTATGGTAAGGGCTGGCCCCAGTAGTAAACTAGTTCCTCTTATTATTGAGAGCAAGCTTGTTAATACTACAAGGCACCGCAAGATTCTGTCTCCTTCCTTGAGAAAATGGCTGAGAGACAGAAACATTTCTACGGAAGCCCGAATACTTCGACTTGAAGAAGGATATGTCCAGGAAGGCAGCTTTGTCTCTGTAATGGGAATGTTGCATAGGAATAACGGTCATATAACAATAGTTCAACCTCCAGAAGCAATCTCTACCGGATGTTTATGGCGGAAACTTCTCCTTCCCATTTACATTGATGGACTAGTTCTTGGGGTCTTACAGACGACTGGCCTTCCGCTCGGCCAGGGACCATTATGTCACCAAGGACAGTTTGCTGACATATGA MVAPSKAVGCERKREERVMSDLSIAAPTEKHHHYSACNPIPSAALYILIPLFILGFSVSIFVLVVVHNAFFFLSLLLLSIFLSAFALWNNLSFSSKAAILSFLHSFPDSDLTLAREGQLVKITGFASCGTVSLESSYEKATGCIYASTSLYEYRGMPLIFQKITQPYCGWRLAYSERFSTDFYITDRKTGIRAMVRAGPSSKLVPLIIESKLVNTTRHRKILSPSLRKWLRDRNISTEARILRLEEGYVQEGSFVSVMGMLHRNNGHITIVQPPEAISTGCLWRKLLLPIYIDGLVLGVLQTTGLPLGQGPLCHQGQFADI Homology
BLAST of Clc05G00850 vs. NCBI nr
Match: XP_038902469.1 (uncharacterized membrane protein At1g16860-like [Benincasa hispida]) HSP 1 Score: 544.3 bits (1401), Expect = 7.2e-151 Identity = 275/302 (91.06%), Postives = 289/302 (95.70%), Query Frame = 0
BLAST of Clc05G00850 vs. NCBI nr
Match: XP_016898903.1 (PREDICTED: uncharacterized membrane protein At1g16860-like [Cucumis melo] >KAA0048859.1 putative membrane protein [Cucumis melo var. makuwa] >TYK20811.1 putative membrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 533.5 bits (1373), Expect = 1.3e-147 Identity = 272/305 (89.18%), Postives = 285/305 (93.44%), Query Frame = 0
BLAST of Clc05G00850 vs. NCBI nr
Match: XP_004133793.1 (uncharacterized membrane protein At1g16860 [Cucumis sativus] >KGN56391.1 hypothetical protein Csa_009581 [Cucumis sativus]) HSP 1 Score: 526.2 bits (1354), Expect = 2.0e-145 Identity = 271/305 (88.85%), Postives = 283/305 (92.79%), Query Frame = 0
BLAST of Clc05G00850 vs. NCBI nr
Match: KAG6582692.1 (putative membrane protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019089.1 putative membrane protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 521.2 bits (1341), Expect = 6.5e-144 Identity = 262/303 (86.47%), Postives = 285/303 (94.06%), Query Frame = 0
BLAST of Clc05G00850 vs. NCBI nr
Match: XP_023527377.1 (uncharacterized membrane protein At1g16860-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 520.0 bits (1338), Expect = 1.4e-143 Identity = 262/303 (86.47%), Postives = 284/303 (93.73%), Query Frame = 0
BLAST of Clc05G00850 vs. ExPASy Swiss-Prot
Match: Q9FZ45 (Uncharacterized membrane protein At1g16860 OS=Arabidopsis thaliana OX=3702 GN=At1g16860 PE=1 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.1e-45 Identity = 96/264 (36.36%), Postives = 159/264 (60.23%), Query Frame = 0
BLAST of Clc05G00850 vs. ExPASy TrEMBL
Match: A0A5D3DB30 (Putative membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00720 PE=4 SV=1) HSP 1 Score: 533.5 bits (1373), Expect = 6.1e-148 Identity = 272/305 (89.18%), Postives = 285/305 (93.44%), Query Frame = 0
BLAST of Clc05G00850 vs. ExPASy TrEMBL
Match: A0A1S4DSG0 (uncharacterized membrane protein At1g16860-like OS=Cucumis melo OX=3656 GN=LOC103483151 PE=4 SV=1) HSP 1 Score: 533.5 bits (1373), Expect = 6.1e-148 Identity = 272/305 (89.18%), Postives = 285/305 (93.44%), Query Frame = 0
BLAST of Clc05G00850 vs. ExPASy TrEMBL
Match: A0A0A0L8G1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119250 PE=4 SV=1) HSP 1 Score: 526.2 bits (1354), Expect = 9.8e-146 Identity = 271/305 (88.85%), Postives = 283/305 (92.79%), Query Frame = 0
BLAST of Clc05G00850 vs. ExPASy TrEMBL
Match: A0A6J1E8T9 (uncharacterized membrane protein At1g16860-like OS=Cucurbita moschata OX=3662 GN=LOC111431906 PE=4 SV=1) HSP 1 Score: 519.6 bits (1337), Expect = 9.2e-144 Identity = 261/303 (86.14%), Postives = 285/303 (94.06%), Query Frame = 0
BLAST of Clc05G00850 vs. ExPASy TrEMBL
Match: A0A6J1IQE9 (uncharacterized membrane protein At1g16860-like OS=Cucurbita maxima OX=3661 GN=LOC111479071 PE=4 SV=1) HSP 1 Score: 514.6 bits (1324), Expect = 2.9e-142 Identity = 262/304 (86.18%), Postives = 284/304 (93.42%), Query Frame = 0
BLAST of Clc05G00850 vs. TAIR 10
Match: AT4G22290.1 (Ubiquitin-specific protease family C19-related protein ) HSP 1 Score: 190.3 bits (482), Expect = 2.4e-48 Identity = 99/258 (38.37%), Postives = 156/258 (60.47%), Query Frame = 0
BLAST of Clc05G00850 vs. TAIR 10
Match: AT1G16860.1 (Ubiquitin-specific protease family C19-related protein ) HSP 1 Score: 185.3 bits (469), Expect = 7.9e-47 Identity = 96/264 (36.36%), Postives = 159/264 (60.23%), Query Frame = 0
BLAST of Clc05G00850 vs. TAIR 10
Match: AT1G78880.1 (Ubiquitin-specific protease family C19-related protein ) HSP 1 Score: 183.0 bits (463), Expect = 3.9e-46 Identity = 96/264 (36.36%), Postives = 155/264 (58.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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