Clc05G00730 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G00730
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	40S ribosomal protein S6
Location	ClcChr05: 536905 .. 539718 (+)
RNA-Seq Expression	Clc05G00730
Synteny	Clc05G00730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGACGCCAATTATTAAGTGTTGAGGGCCAAATTGGTATTTCAACAAATTATAAGATACTAAGGACGGCACAATAGGGGCAGGTTTTAAACCCCAAAGCTTAAGGCGTAACTCGCTCCTCCGTTGGTTTGTTATCTGCGGCCGCCACACTCCTACAATCTTCAAGATGAAGGTTCAGCCCTTAGATTTCTCTTCTTCTCGACTGTTTTCTCTAGTTTTACTTCTATACTAACTTTGAGTTTTTATGTTTCCAGTTTAATATCGCGAATCCGACTACTGGATGCCAGAAGAAGCTCGAAATCGACGATGATCAGAAACTGTTAGCTTTCAAATTCCCTTATGCTTCATTCTGTTGTCTAATTGACGAACGTTTTATTAAATGTGGATGAATTTTTCTGTCCATCTTCAGTCGAATGTTCATACTGTAAACATTACATAATTACATGCGGTTGGTCTAATTGAATGTTGAAAAGTATATCTTGATATGCTTAAATCCTTGATTCCAATACTATCACTTTCTGGAACTAGGTGTTTTGAGATGCATAATAGATAAAATGGGCCCTTTTTGATCGGTAGAGTTGCGTTGAAATCGATTGCTCGATATCCTTGCAGTTTAAATTTTTTAGTTAACGTTCAGCCTTGCTATGGGGGATTTAGCTTAGGGCTGTTTGGTATGGATTCTATTTCATGTTTTCAAACCTACGCATGCCTTAACTGAAATTATTTTTTTGAAAAATGTTTTCCAATTTCGTAATCTGTAAACTCTGAAAACATTTTTCGATGTATCTGATTTTAATTTTGAAATTTAAAAATGTGGATTAATATTAACAAAGATTATAATGTAAATAAATATAGTATTTCATATTATAAACTCAATTCATTTTTGTTAAATTAAATTTATTTTATTATATAATGTAATTATACAATATTACTTGGTGAGACAAACACAATTTTTAAAAATAGAAAACCAAATATCAAATGGTTATTGAACGTGGCTTAGCTATCCCGTTTTGTTTGTTTGTATGTTTTCCATCATTTTTTTACCCGGTTTAAATTTTCATCATGTACTAAACTTATCATTTGTCATTGTTTAGCCGTGCTTTTTTTGACAAGAGGATCTCCCAGGAGGTCAGTGGAGATTCCCTCGGAGAGGTATGTTGGTGCTCTTTTGTCATCCAATCCAATAAGTGGGATTTTAGTTCCTAGTTGCTGTCTCTGAGTTTACTGATTGAGGATTTTCGTTTGCTCAGGAATTCAAGGGCTATGTTTTCAAGATTATGGGAGGTTGTGACAAGCAGGGTTTCCCAATGAAACAGGGAGTTTTGACCCCTGGCCGTGTCCGTCTCTTGCTACACAGAGGTTTGTGGAACTGTTTATACTAGTGAATAGTTAACCCATTTGATCATATTTGTGGCCTTTATTTGGTATTCTATCATTCAAAATAAAGCTTAGTTTTCTTACCAAAAACATATTTGTGGCCTTTGTTATTTGTTTTCATTAGTTTATAGGACTATCTAAGACTACAATGCAACCATCTCGTATATCACTTCCTTATTTCCCTAAGTTGGTGTAAATTGATCTTCCATTTTTGTAACTATAGTTCATCTAATCTTATGAGTTATGACCAATTGGAGAAGCTTCTTTATGTAATCCATTGAACAGGATCTTTTATAATTTCATCTCACCAATGAAATTTTTGTTTCCTATAAAAAAAATTAGTTTATAGCACTATGGTAAGTAATGCAAGCATGTGTTTGATTTCTGTGGTCAGGAACCCCTTGTTTCCGTGGTTATGGTAGGCGTAATGGAGAACGCAGAAGGAAGTCTGTACGTGGATGCATTGTGAGCCCTGACCTTTCTGTTCTGAATCTGGTTATTGTGAAGAAGGGAGATAATGATCTACCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCTTCCAAAATTCGCAAACTTTTCAATTTGTCAAAGGATGATGATGTTCGAAAGTATGTTAACACATACCGTAGATCATTCACCACAAAATCTGGTATGGTTTATGAATGCTTTTTATGGTTGTTGAACTTGTCAAACAAATTGAAGGCTTGTTTGGATGGGCATTATGAGTGCTCAAAAACACTTTTTTTTTTTTATGCTCGAAGACATTTTTTTCACTTGAAAACATTTTTGTAAGCATTTAGAAAATCAATCCAAAAACACTTTTTTTTTCACTTAAAAATACTTTTTTCAACTGACTCATAGATGGTGCAATTACCGGTTGAGATCTAATACTTTTCTCAAGTTGCATGCTCGGATGGATGAATTCTTATAATTACCTATACTTGGTAATTTGTATGGATAGTCCTAATCTTTCTAGATGAACTGAACCTTCATTTGACTTTGGATTGCATTGTTGTTCAATATTGCTCCTGTTTGCACATCTTGATGGATTGTGCTTTGTAACTGGACTAATCTCCTGGTCTCATTTTGGCTATTAATAAAATTTTATTTTATTCGAATTGTTTTTTCAGTTCCATATATTTTGGAATCAAGTTTCTGATGTTTATTTTATTGGCAGGCAAAAAGGTTAGCAAAGCACCCAAGATTCAGAGGTTGGTTACCCCGCTGACCCTGCAAAGGAAGCGAGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCGAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGAGAACGTCGCAGTGAGAGTTTGGCCAAGAAGAGATCCAGGCTCTCTGCTGCTTCAAAGCCGTCTATTGCTGCTGCTTAG

mRNA sequence

GTGGACGCCAATTATTAAGTGTTGAGGGCCAAATTGGTATTTCAACAAATTATAAGATACTAAGGACGGCACAATAGGGGCAGGTTTTAAACCCCAAAGCTTAAGGCGTAACTCGCTCCTCCGTTGGTTTGTTATCTGCGGCCGCCACACTCCTACAATCTTCAAGATGAAGTTTAATATCGCGAATCCGACTACTGGATGCCAGAAGAAGCTCGAAATCGACGATGATCAGAAACTCCGTGCTTTTTTTGACAAGAGGATCTCCCAGGAGGTCAGTGGAGATTCCCTCGGAGAGGAATTCAAGGGCTATGTTTTCAAGATTATGGGAGGTTGTGACAAGCAGGGTTTCCCAATGAAACAGGGAGTTTTGACCCCTGGCCGTGTCCGTCTCTTGCTACACAGAGGAACCCCTTGTTTCCGTGGTTATGGTAGGCGTAATGGAGAACGCAGAAGGAAGTCTGTACGTGGATGCATTGTGAGCCCTGACCTTTCTGTTCTGAATCTGGTTATTGTGAAGAAGGGAGATAATGATCTACCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCTTCCAAAATTCGCAAACTTTTCAATTTGTCAAAGGATGATGATGTTCGAAATTCCATATATTTTGGAATCAAGTTTCTGATGTTTATTTTATTGGCAGGCAAAAAGGTTAGCAAAGCACCCAAGATTCAGAGGTTGGTTACCCCGCTGACCCTGCAAAGGAAGCGAGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCGAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGAGAACGTCGCAGTGAGAGTTTGGCCAAGAAGAGATCCAGGCTCTCTGCTGCTTCAAAGCCGTCTATTGCTGCTGCTTAG

Coding sequence (CDS)

ATGAAGTTTAATATCGCGAATCCGACTACTGGATGCCAGAAGAAGCTCGAAATCGACGATGATCAGAAACTCCGTGCTTTTTTTGACAAGAGGATCTCCCAGGAGGTCAGTGGAGATTCCCTCGGAGAGGAATTCAAGGGCTATGTTTTCAAGATTATGGGAGGTTGTGACAAGCAGGGTTTCCCAATGAAACAGGGAGTTTTGACCCCTGGCCGTGTCCGTCTCTTGCTACACAGAGGAACCCCTTGTTTCCGTGGTTATGGTAGGCGTAATGGAGAACGCAGAAGGAAGTCTGTACGTGGATGCATTGTGAGCCCTGACCTTTCTGTTCTGAATCTGGTTATTGTGAAGAAGGGAGATAATGATCTACCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCTTCCAAAATTCGCAAACTTTTCAATTTGTCAAAGGATGATGATGTTCGAAATTCCATATATTTTGGAATCAAGTTTCTGATGTTTATTTTATTGGCAGGCAAAAAGGTTAGCAAAGCACCCAAGATTCAGAGGTTGGTTACCCCGCTGACCCTGCAAAGGAAGCGAGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCGAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGAGAACGTCGCAGTGAGAGTTTGGCCAAGAAGAGATCCAGGCTCTCTGCTGCTTCAAAGCCGTCTATTGCTGCTGCTTAG

Protein sequence

MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRNSIYFGIKFLMFILLAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAAA

Homology

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BLAST of Clc05G00730 vs. NCBI nr
Match: XP_008437828.1 (PREDICTED: 40S ribosomal protein S6-like [Cucumis melo] >KAA0048850.1 40S ribosomal protein S6-like [Cucumis melo var. makuwa] >TYK20802.1 40S ribosomal protein S6-like [Cucumis melo var. makuwa])

HSP 1 Score: 445.3 bits (1144), Expect = 3.6e-121
Identity = 236/252 (93.65%), Postives = 240/252 (95.24%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRNSIYFGIKFLMFILLAGKKVSKAP 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSK+DDVR   Y       F + +GKKVSKAP
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRK--YVNTYRRSFTIKSGKKVSKAP 180

Query: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240
           KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR
Sbjct: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240

Query: 241 LSAASKPSIAAA 253
           LSAASKPSIAAA
Sbjct: 241 LSAASKPSIAAA 250

[Close]

BLAST of Clc05G00730 vs. NCBI nr
Match: XP_022131886.1 (40S ribosomal protein S6 [Momordica charantia])

HSP 1 Score: 444.9 bits (1143), Expect = 4.6e-121
Identity = 236/251 (94.02%), Postives = 238/251 (94.82%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRNSIYFGIKFLMFILLAGKKVSKAP 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSK+DDVR   Y       F   AGKKVSKAP
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRK--YVNTYRRTFTTKAGKKVSKAP 180

Query: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240
           KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR
Sbjct: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240

Query: 241 LSAASKPSIAA 252
           LSAASKPS+AA
Sbjct: 241 LSAASKPSVAA 249

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BLAST of Clc05G00730 vs. NCBI nr
Match: XP_038886740.1 (40S ribosomal protein S6 [Benincasa hispida])

HSP 1 Score: 443.0 bits (1138), Expect = 1.8e-120
Identity = 236/251 (94.02%), Postives = 238/251 (94.82%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVS DLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRNSIYFGIKFLMFILLAGKKVSKAP 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSK+DDVR   Y       FI  +GKKVSKAP
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRK--YVNTYRRSFITKSGKKVSKAP 180

Query: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240
           KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR
Sbjct: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240

Query: 241 LSAASKPSIAA 252
           LSAASKPSIAA
Sbjct: 241 LSAASKPSIAA 249

[Close]

BLAST of Clc05G00730 vs. NCBI nr
Match: XP_022962357.1 (40S ribosomal protein S6-like [Cucurbita moschata] >XP_023547004.1 40S ribosomal protein S6-like [Cucurbita pepo subsp. pepo] >KAG6598696.1 40S ribosomal protein S6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029638.1 40S ribosomal protein S6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 442.2 bits (1136), Expect = 3.0e-120
Identity = 236/251 (94.02%), Postives = 237/251 (94.42%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVS DLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRNSIYFGIKFLMFILLAGKKVSKAP 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSK+DDVR   Y       F   AGKKVSKAP
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRK--YVNTYRRSFTTKAGKKVSKAP 180

Query: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240
           KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR
Sbjct: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240

Query: 241 LSAASKPSIAA 252
           LSAASKPSIAA
Sbjct: 241 LSAASKPSIAA 249

[Close]

BLAST of Clc05G00730 vs. NCBI nr
Match: XP_022948606.1 (40S ribosomal protein S6 [Cucurbita moschata] >XP_022974831.1 40S ribosomal protein S6 [Cucurbita maxima] >XP_023540275.1 40S ribosomal protein S6 [Cucurbita pepo subsp. pepo] >KAG6597045.1 40S ribosomal protein S6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028519.1 40S ribosomal protein S6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 441.0 bits (1133), Expect = 6.7e-120
Identity = 235/251 (93.63%), Postives = 237/251 (94.42%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVS DLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRNSIYFGIKFLMFILLAGKKVSKAP 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSK+DDVR   Y       F   +GKKVSKAP
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRK--YVNTYRRSFTTKSGKKVSKAP 180

Query: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240
           KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR
Sbjct: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240

Query: 241 LSAASKPSIAA 252
           LSAASKPSIAA
Sbjct: 241 LSAASKPSIAA 249

[Close]

BLAST of Clc05G00730 vs. ExPASy Swiss-Prot
Match: Q9M3V8 (40S ribosomal protein S6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 6.1e-116
Identity = 220/245 (89.80%), Postives = 227/245 (92.65%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRNSIYFGIKFLMFILLAGKKVSKAP 180
           NDLPGLTD EKPRMRGPKRASKIRKLFNLSK+DDVR   Y       F    GK  SKAP
Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRK--YVNTYRRTFTNKKGKTCSKAP 180

Query: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240
           KIQRLVTPLTLQRKR RIAEKKKR+AKAKSEAAEYQKLLASRLKEQR+RRSESLAKKRSR
Sbjct: 181 KIQRLVTPLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLASRLKEQRDRRSESLAKKRSR 240

Query: 241 LSAAS 246
           LSAA+
Sbjct: 241 LSAAA 243

[Close]

BLAST of Clc05G00730 vs. ExPASy Swiss-Prot
Match: O48549 (40S ribosomal protein S6-1 OS=Arabidopsis thaliana OX=3702 GN=RPS6A PE=1 SV=2)

HSP 1 Score: 411.0 bits (1055), Expect = 9.8e-114
Identity = 217/252 (86.11%), Postives = 231/252 (91.67%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGD+LGEEFKGYVFKI GGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVSPDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRNSIYFGIKFLMFILLAGKKVSKAP 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNL K+DDVR   Y       F    GK+VSKAP
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRT--YVNTYRRKFTNKKGKEVSKAP 180

Query: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240
           KIQRLVTPLTLQRKR RIA+KKK+IAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSR
Sbjct: 181 KIQRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSR 240

Query: 241 L-SAASKPSIAA 252
           L SAA+KPS+ A
Sbjct: 241 LSSAAAKPSVTA 250

[Close]

BLAST of Clc05G00730 vs. ExPASy Swiss-Prot
Match: P51430 (40S ribosomal protein S6-2 OS=Arabidopsis thaliana OX=3702 GN=RPS6B PE=1 SV=3)

HSP 1 Score: 409.5 bits (1051), Expect = 2.8e-113
Identity = 216/251 (86.06%), Postives = 228/251 (90.84%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVSPDLSVLNLVIVKKG 
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRNSIYFGIKFLMFILLAGKKVSKAP 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNL K+DDVR   Y       F    GKKVSKAP
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRK--YVNTYRRTFTNKKGKKVSKAP 180

Query: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240
           KIQRLVTPLTLQRKR RIA+KKKRIAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSR
Sbjct: 181 KIQRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSR 240

Query: 241 LSAASKPSIAA 252
           LS+A    +AA
Sbjct: 241 LSSAPAKPVAA 249

[Close]

BLAST of Clc05G00730 vs. ExPASy Swiss-Prot
Match: P29345 (40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPS6 PE=2 SV=2)

HSP 1 Score: 308.9 bits (790), Expect = 5.2e-83
Identity = 170/206 (82.52%), Postives = 180/206 (87.38%), Query Frame = 0


Query: 46  KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVS 105
           KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL+RGTPCFRGYGRRNGERRRKSVRGCIVS
Sbjct: 1   KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVS 60

Query: 106 PDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRNSIYFGIKF 165
           PDLSVLNLVIVKKG+NDLPGLTDTEKPRMRGP+   +   L+   K+DDVR  +    +F
Sbjct: 61  PDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPREPQRSEALY--FKEDDVRKYVNTTAEF 120

Query: 166 LMFILLAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKE 225
                    K SKAPKIQRLVTPLTLQRKR RIA+KKKRIAKAKSEAAEYQKLLASRLKE
Sbjct: 121 -----TTKWKGSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKE 180

Query: 226 QRERRSESLAKKRSRLSAASKPSIAA 252
           QRE+RSESLAKKRSRLSAASKPSIAA
Sbjct: 181 QREKRSESLAKKRSRLSAASKPSIAA 199

[Close]

BLAST of Clc05G00730 vs. ExPASy Swiss-Prot
Match: P62753 (40S ribosomal protein S6 OS=Homo sapiens OX=9606 GN=RPS6 PE=1 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 2.0e-74
Identity = 157/244 (64.34%), Postives = 188/244 (77.05%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MK NI+ P TGCQK +E+DD++KLR F++KR++ EV+ D+LGEE+KGYV +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120
           FPMKQGVLT GRVRLLL +G  C+R   RR GER+RKSVRGCIV  +LSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCYR--PRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRNSIYFGIKFLMFILLAGKKV-SKA 180
            D+PGLTDT  PR  GPKRAS+IRKLFNLSK+DDVR  +         +   GKK  +KA
Sbjct: 121 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV-----VRKPLNKEGKKPRTKA 180

Query: 181 PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRS 240
           PKIQRLVTP  LQ KR RIA KK+R  K K EAAEY KLLA R+KE +E+R E +AK+R 
Sbjct: 181 PKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRR- 236

Query: 241 RLSA 244
           RLS+
Sbjct: 241 RLSS 236

[Close]

BLAST of Clc05G00730 vs. ExPASy TrEMBL
Match: A0A5D3DB31 (40S ribosomal protein S6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00630 PE=3 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.7e-121
Identity = 236/252 (93.65%), Postives = 240/252 (95.24%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRNSIYFGIKFLMFILLAGKKVSKAP 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSK+DDVR   Y       F + +GKKVSKAP
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRK--YVNTYRRSFTIKSGKKVSKAP 180

Query: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240
           KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR
Sbjct: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240

Query: 241 LSAASKPSIAAA 253
           LSAASKPSIAAA
Sbjct: 241 LSAASKPSIAAA 250

[Close]

BLAST of Clc05G00730 vs. ExPASy TrEMBL
Match: A0A1S3AVI2 (40S ribosomal protein S6 OS=Cucumis melo OX=3656 GN=LOC103483142 PE=3 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.7e-121
Identity = 236/252 (93.65%), Postives = 240/252 (95.24%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRNSIYFGIKFLMFILLAGKKVSKAP 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSK+DDVR   Y       F + +GKKVSKAP
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRK--YVNTYRRSFTIKSGKKVSKAP 180

Query: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240
           KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR
Sbjct: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240

Query: 241 LSAASKPSIAAA 253
           LSAASKPSIAAA
Sbjct: 241 LSAASKPSIAAA 250

[Close]

BLAST of Clc05G00730 vs. ExPASy TrEMBL
Match: A0A6J1BQQ2 (40S ribosomal protein S6 OS=Momordica charantia OX=3673 GN=LOC111004918 PE=3 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 2.3e-121
Identity = 236/251 (94.02%), Postives = 238/251 (94.82%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRNSIYFGIKFLMFILLAGKKVSKAP 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSK+DDVR   Y       F   AGKKVSKAP
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRK--YVNTYRRTFTTKAGKKVSKAP 180

Query: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240
           KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR
Sbjct: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240

Query: 241 LSAASKPSIAA 252
           LSAASKPS+AA
Sbjct: 241 LSAASKPSVAA 249

[Close]

BLAST of Clc05G00730 vs. ExPASy TrEMBL
Match: A0A6J1HCI6 (40S ribosomal protein S6 OS=Cucurbita moschata OX=3662 GN=LOC111462827 PE=3 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.5e-120
Identity = 236/251 (94.02%), Postives = 237/251 (94.42%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVS DLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRNSIYFGIKFLMFILLAGKKVSKAP 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSK+DDVR   Y       F   AGKKVSKAP
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRK--YVNTYRRSFTTKAGKKVSKAP 180

Query: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240
           KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR
Sbjct: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240

Query: 241 LSAASKPSIAA 252
           LSAASKPSIAA
Sbjct: 241 LSAASKPSIAA 249

[Close]

BLAST of Clc05G00730 vs. ExPASy TrEMBL
Match: A0A6J1ICI3 (40S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111473607 PE=3 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 3.3e-120
Identity = 235/251 (93.63%), Postives = 237/251 (94.42%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVS DLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRNSIYFGIKFLMFILLAGKKVSKAP 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSK+DDVR   Y       F   +GKKVSKAP
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRK--YVNTYRRSFTTKSGKKVSKAP 180

Query: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240
           KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR
Sbjct: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240

Query: 241 LSAASKPSIAA 252
           LSAASKPSIAA
Sbjct: 241 LSAASKPSIAA 249

[Close]

BLAST of Clc05G00730 vs. TAIR 10
Match: AT4G31700.1 (ribosomal protein S6 )

HSP 1 Score: 411.0 bits (1055), Expect = 6.9e-115
Identity = 217/252 (86.11%), Postives = 231/252 (91.67%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGD+LGEEFKGYVFKI GGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVSPDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRNSIYFGIKFLMFILLAGKKVSKAP 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNL K+DDVR   Y       F    GK+VSKAP
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRT--YVNTYRRKFTNKKGKEVSKAP 180

Query: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240
           KIQRLVTPLTLQRKR RIA+KKK+IAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSR
Sbjct: 181 KIQRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSR 240

Query: 241 L-SAASKPSIAA 252
           L SAA+KPS+ A
Sbjct: 241 LSSAAAKPSVTA 250

[Close]

BLAST of Clc05G00730 vs. TAIR 10
Match: AT5G10360.1 (Ribosomal protein S6e )

HSP 1 Score: 409.5 bits (1051), Expect = 2.0e-114
Identity = 216/251 (86.06%), Postives = 228/251 (90.84%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVSPDLSVLNLVIVKKG 
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRNSIYFGIKFLMFILLAGKKVSKAP 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNL K+DDVR   Y       F    GKKVSKAP
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRK--YVNTYRRTFTNKKGKKVSKAP 180

Query: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240
           KIQRLVTPLTLQRKR RIA+KKKRIAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSR
Sbjct: 181 KIQRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSR 240

Query: 241 LSAASKPSIAA 252
           LS+A    +AA
Sbjct: 241 LSSAPAKPVAA 249

[Close]

BLAST of Clc05G00730 vs. TAIR 10
Match: AT5G10360.2 (Ribosomal protein S6e )

HSP 1 Score: 323.6 bits (828), Expect = 1.5e-88
Identity = 180/251 (71.71%), Postives = 190/251 (75.70%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVSPDLSVLNLVIVKK  
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKK-- 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRNSIYFGIKFLMFILLAGKKVSKAP 180
                                                               GKKVSKAP
Sbjct: 121 ----------------------------------------------------GKKVSKAP 180

Query: 181 KIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSR 240
           KIQRLVTPLTLQRKR RIA+KKKRIAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSR
Sbjct: 181 KIQRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSR 197

Query: 241 LSAASKPSIAA 252
           LS+A    +AA
Sbjct: 241 LSSAPAKPVAA 197

[Close]

BLAST of Clc05G00730 vs. TAIR 10
Match: AT4G31700.2 (ribosomal protein S6 )

HSP 1 Score: 287.3 bits (734), Expect = 1.2e-77
Identity = 159/190 (83.68%), Postives = 170/190 (89.47%), Query Frame = 0


Query: 63  MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGDND 122
           MKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVSPDLSVLNLVIVKKG+ND
Sbjct: 1   MKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 60

Query: 123 LPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRNSIYFGIKFLMFILLAGKKVSKAPKI 182
           LPGLTDTEKPRMRGPKRASKIRKLFNL K+DDVR   Y       F    GK+VSKAPKI
Sbjct: 61  LPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRT--YVNTYRRKFTNKKGKEVSKAPKI 120

Query: 183 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL- 242
           QRLVTPLTLQRKR RIA+KKK+IAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRL 
Sbjct: 121 QRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 180

Query: 243 SAASKPSIAA 252
           SAA+KPS+ A
Sbjct: 181 SAAAKPSVTA 188

The following BLAST results are available for this feature:

BLAST of Clc05G00730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437828.1	3.6e-121	93.65	PREDICTED: 40S ribosomal protein S6-like [Cucumis melo] >KAA0048850.1 40S riboso...	[more]
XP_022131886.1	4.6e-121	94.02	40S ribosomal protein S6 [Momordica charantia]	[more]
XP_038886740.1	1.8e-120	94.02	40S ribosomal protein S6 [Benincasa hispida]	[more]
XP_022962357.1	3.0e-120	94.02	40S ribosomal protein S6-like [Cucurbita moschata] >XP_023547004.1 40S ribosomal...	[more]
XP_022948606.1	6.7e-120	93.63	40S ribosomal protein S6 [Cucurbita moschata] >XP_022974831.1 40S ribosomal prot...	[more]

BLAST of Clc05G00730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M3V8	6.1e-116	89.80	40S ribosomal protein S6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1	[more]
O48549	9.8e-114	86.11	40S ribosomal protein S6-1 OS=Arabidopsis thaliana OX=3702 GN=RPS6A PE=1 SV=2	[more]
P51430	2.8e-113	86.06	40S ribosomal protein S6-2 OS=Arabidopsis thaliana OX=3702 GN=RPS6B PE=1 SV=3	[more]
P29345	5.2e-83	82.52	40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPS6 PE=2 SV...	[more]
P62753	2.0e-74	64.34	40S ribosomal protein S6 OS=Homo sapiens OX=9606 GN=RPS6 PE=1 SV=1	[more]

BLAST of Clc05G00730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DB31	1.7e-121	93.65	40S ribosomal protein S6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3AVI2	1.7e-121	93.65	40S ribosomal protein S6 OS=Cucumis melo OX=3656 GN=LOC103483142 PE=3 SV=1	[more]
A0A6J1BQQ2	2.3e-121	94.02	40S ribosomal protein S6 OS=Momordica charantia OX=3673 GN=LOC111004918 PE=3 SV=...	[more]
A0A6J1HCI6	1.5e-120	94.02	40S ribosomal protein S6 OS=Cucurbita moschata OX=3662 GN=LOC111462827 PE=3 SV=1	[more]
A0A6J1ICI3	3.3e-120	93.63	40S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111473607 PE=3 SV=1	[more]

BLAST of Clc05G00730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31700.1	6.9e-115	86.11	ribosomal protein S6	[more]
AT5G10360.1	2.0e-114	86.06	Ribosomal protein S6e	[more]
AT5G10360.2	1.5e-88	71.71	Ribosomal protein S6e	[more]
AT4G31700.2	1.2e-77	83.68	ribosomal protein S6	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 191..218
None	No IPR available	GENE3D	1.20.5.2650		coord: 133..243 e-value: 6.8E-34 score: 118.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..252
None	No IPR available	PANTHER	PTHR11502:SF23	40S RIBOSOMAL PROTEIN S6	coord: 1..251
IPR001377	Ribosomal protein S6e	SMART	SM01405	Ribosomal_S6e_2	coord: 1..128 e-value: 1.2E-81 score: 287.2
IPR001377	Ribosomal protein S6e	PFAM	PF01092	Ribosomal_S6e	coord: 1..128 e-value: 9.0E-56 score: 187.2
IPR001377	Ribosomal protein S6e	PANTHER	PTHR11502	40S RIBOSOMAL PROTEIN S6	coord: 1..251
IPR014401	Ribosomal protein S6, eukaryotic	PIRSF	PIRSF002129	RPS6e	coord: 1..251 e-value: 1.1E-113 score: 376.5
IPR018282	Ribosomal protein S6e, conserved site	PROSITE	PS00578	RIBOSOMAL_S6E	coord: 52..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G00730.2	Clc05G00730.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome