Clc05G00340 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G00340
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	zinc finger CCCH domain-containing protein 44-like isoform X3
Location	ClcChr05: 243652 .. 250957 (+)
RNA-Seq Expression	Clc05G00340
Synteny	Clc05G00340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGGAGAGAGGCAAAAGCAGAGGACTGGTGCTTCGTGTGCAAGGATGGTGGAGATTTGATTCTCTGCAATCATGGGTTAGTTTCTTTGGTTACACTCTGTTTCCATGGCCTCCCTTCATATTCTCCGCATGATCTCATCCTTAGTTTATGCATTGCTTTTTCTTTCAGCAACTGCTCAAAGGTGTACCATCTGGAATGCCTGGGATTCGACTGCCAATCTTCCTCTCAAATTGAAGAACATTGGAGCTGCGGTAATTAGCCCCACCCCATTCCTCTACTTTCTTTCTATTACCAAATTCCAAGATTGATATTGACCCTGTTTTTTCTTTTCCCAGATTGCCATTCTTGTTCTTCCTGCGAAGGAGCCTCGGAGGTCCACTGCTTCTGCTGTCCAGCTTCTTTCTGCAAAAACTGTATCAAGTCTGTAAAGTTTATTCCCTTGCGACCCAACAAAGGGCTCTGCGCAGATTGCTGGACCCTCGTTCGTCTTGCGGAAAAACTTTCCTTCTCCAAGGTATGTATTATTGTGTTGCTTCTTTAATTCATCCTCAAGAACCTCACTCAGTGACCAATGTTTGTATTTAGTAGAAAGCTGTGGATTTCGAAGACAGAGATACACACGAGTGCCTTTTCAAAGAGTATTGGGATATTGTGAAAGAAGAAGAAGGGTTAAGCAGAGGCGATCTTGTGGCTGTGGAAGAAGCCTCTTCATCGAACAAGGGCATAAGGCAAATTATGAAGCGCACCACCCCAAAACCAACCCCAACGCCTGCGGCCGAGACCCTGCAAGATAGAGACGCCAAGAAATTCGTCGGCTGGGGATCCAAACCTCTCATTGAATTTCTCAATTCCTTTGGCGTAGATTCAACCAAGCAGTTGTCTCCATGCGAAGTCAGTTCCATCATCTTGAAGTACGTTGAAGAGAATGACCTCATCCATCCCATAAATAAGAAGAAAGTCATATGTGATGGACCCCTGCATCTCATTTTCAAGAAGAACACTGTACCCATGAAGCACATTAATCTTCTCTTGGGGCCGCATCTTTTTCATCCCAATAATGCCAATAATAGGAATAATGGCATTGGCAACAAGAGATCATGTTTGAAACCGGATCAACCACAACTTAATGGGGATGTTGCTTTGAACTTGAACAAGCACCACAAAACATTGAGCTGCTCTGATCAGGACAAACCAACCTTTGCATCAGTGGTTCCCCATAACATCAATCTCGTCTACTTGAGGAGGAGCTTAGTGGAGGATCTTTTAAGACAGCAACCCGAAACCTTCGAGGACATGGTGGTGGGAAGTTTTGTTAAGGTCGTCGACACAAATTCTACGCAACTTCATTCTAAACCCAAAATTTCTCAACATCTGTTGCAAGTTACAGGTTGAATATAACATACATATGTTCCTTCAAGTTGTTTTCTCTTTTGCTGATTTACTAACTAAATGATTTTTTGGCCTCTCAGCTGTAAACAAAATGTCGAGCGCAGATGGAAGGAGCGTTGTGTTGCATGTTTGGAGGTTGCCCAACATTCAAATTTCCATGCTCTCTGATTCTGACTTAACTGAGGTAACCAAACTACATACCAATTGCCCAATCAATATTATTCTCAATTTAAACCCTTGTTTTGATGAATTCTACTGTTATAATATTGATTTCGATTTTATCTTAATTAATTTGAGCTTAATTGGTTTATTATGGTAAATTAAAAGTGACATTATATTGCTTTCCCAAAACACTTCAATTAGATTGGGCTTGATGGGGGAGCCCAATTGCTAGTAAACTAATTCTGAATTTTTTATCCCTTTTAATTCATTCCAATTCTAATTTTGTAAAAGTAGCATACTTTCCTTATAGATAAGGGGAGAGGGGAGAGGTTAGGTTACATTATTTATAGAAAGAGAGAGTACCCAAACCCATCCACAATAACATGTAGTTGAGGTGTTCCTACAACACGATCAATTGTCCACTATCCGTTCTAATTAAGCTTCTTTTCAACTCTAAGCCCAATTTGATTTTCTACATGTAGGAAGATTGTCAGGATCTTAAGGAAAAGATGGCAAAGGGTTTGCTCCAAAGACCCACCGTTGTAAGTTCAATTCATATGAATAAAATAACAAATTACTCCATTTCTTACATCTAAATATCTAATCAAATAGTTAATAGTAAGAATAAGTTGGATTTTGTTTGTTCCTCTTTTTCCTCGATGATAGGAAGAGATTGAAAAGAAGGCTCGGATTCTTCATCAGGATATTAGGAAGAACGTAAGTATTTCCAAAACTGTTTCTTTTCTTCAAAATAATAAATCTTTTTTTGGTTAAAAATTTTCTCTCTCTCTTGTGGTAGTGGATGGAGAGAGAGCTAGAGAAGTTGCAAAACCTCATTGATCGCGCAAATGAGAAGGGCCGGAGAAGCGAATATCCTTTTGACATTAGTTTTACGTTTTGGAGTTCTTTTTTCCCTCTCTCTTTTAGAGTTTATCTTCAAGTCCATCGTTAATGAATGGTAACGCTGATTTGGCTACCTTAACTAAGCATGTTTGGTGCAAAACATTATACCAACTCATAGAGCAAAGGCAACGGTTGAAGAAAGAAGCAGAACAACAACCACCTCTACTAAAACAACTTCCTACTGTCATCGCTGACACTATGGATGACCGCACTCAACTTCACTCTCATTACTTAGGATCAAAGTCAAATTAATTTCTTGTACAAGCACTTTGAATCTTTTTCATTTATATATATATATATATATCAGTACCTTAACTAGACTTGTTTGGTGCTAAACATTATACCAACTTGTAGAGCAAAGACAAAGTGCTTTTCAGTGTCATCGCTAACACTATCAATGCCCCACTCAACTTCACCCTTGTTAGTTAGGATCAAACCATATTAAATTTGTACAACCACTTTGAATTTCTTTCATTTAGACATACATATCAATATGTAATTTTAATTTGTGCGTGCAATTATTCACGGAGTACTTGGACCCGCTCCCATCTTTTTTCCTATACTTGTACTAAGGAATCTCAAATTTCAATCGCTAGAAACGTGAAACCAGATCAATAAGTTCATCTCACAGGCTGAGAAAGCAACTAATGAGATATAATAGTATGATACAAAGTAAGGGAAAAGATAAGGCTACATATATAACATTTGAACCCATATTTGGAGCTTATCCTTCCAACTAGGAATGGTCCAAGTTGGCAGCAAATTCGACGTTGTCTCCACATTTGGCTACGGTCCTCAGTGCTATTGTTCTGAGTTGTTGGGTTGGCTTAATTCACCTTCCACAAACCCACATTGTTGTACAAATATGTAATTTTGGACATCCATGACAAATGTATCATAAGTTTTGATTTCAATATGATTTGGTTTCATTCGGCTAACAATGTATTGTTCCGAACCCTCCCACTTTTTATTTCTAAGGCTCACCCTCCCAGGAAAATGGGTCTCCCAACTAATAGACTCCTTTTCCTATACCTTCGTCCACCCCTTCACAAAAGGAAGCTTTGCAAGAGCTTCCAAGTTCTTACAAAACTCACTTAAAGCTCTAAAAAGGAAGGAGTACTAATAGATAATATATATATAACTTAGGAGTAAACGAATGAGAGTGTGTCTGCGAGGTTTAGAAAAGAAACTTTTTACAAGAGGCTGATCTTTTCCCAACATTATCCACCATAGTGCTTCAAAAGGATAAAGATTGGGGATCAATCTCGAGAGGAAGACCAAAATAAGAAAAAAGAAAGGCAACCAACATCACAAGTATGATACAAAGTAAGGGAAAATATATATATAAAATTAATATGATTTGAATCCACAGTGGGGGTTATCCTTCCAACTACCTGCGACGCTGGAATGGTCGGAGTTGGCAGCAGATTCGAGGGCGTTTCCACACTTGGCTACGGTCCTGACGTTCTCAATCAACTCCTGAGTGCGATTGTGGTGAGACAAAATTTGGGAGAGTTGTTGGGGGCAAATCACGAGGTTGACCTTCCAGACACCGGCGTTGTTGTAGTTTGGGAGTGGGGGCTTGGGTTGGGTGTCGGCGGTGGACATGCGATAGGGCGTGGATACAAGGGTGCATGGCTCCAGGGAGGGGTTGAGGGGGAGGAGATAGTAGACTTGTCCGCCCTGAAGCTCCTCCTTGTGGTGAAGGGCCTCCGAGAATATGGTCCGGCTTTTGAATATGGCGTGCCCTGGATATTCACCCGTAATGCACTCCGCCGTTATTGGCGTGTACAACTCCATTATCCCCCCATTAAGGGTCACTACTTTCACCATTTCCTGTCTTTCTCCACCCCCTTTCAACATGCAATTTCCCATTTCTATTTACATACAAGCTAGTTTAAGTTAGCTATTAATTCGATGGAATTAACTTGGAGCCGATCCAGGTTTTAGTTCTTCAATGGAAGGAAGGAAGGAAGGAAGCTCACACAACAATCAATCAATCCTTTACTTTCCTTTCTAAATAAACAAAATTCCTGAATGTGGCCCCATCCACGCCCCTTTCCAAATAATTAACTAAACAATCCCTTCCTTTTTGTCTTTTTCTCATCATCCACATTCCCACTCCAACTCAAACACAATATTCTTCTTCATTTCAATTCTCCCCCTCTTCTAATTCTCATCATTTACTCTAATAAAAATTAAACCACAACCACCGTTTCTCTTTCTTGGTGTTTATTAATTGAGAATTCACTACGCCATACTTAATGATGACTTGTCTACCACTCTTTTTCTTCTTATTATTATTACCACCATAACATACTTCTTCGTCTATTGAAACAAAGATGATAGAAGGAATGGAGGGAATATGGAAGATTGTGTGTGTCGTTGACAATTGAATAGGATGATGATGGTGGTACGTGAGTGTCACACACAATTCTCGCTTGCCTTTTTCTTAATAGTTGTAACTTTATTTATTTATATAAATTAAATTCAAACAAGTTTCATTGATTTAACTGTGTAAAGTTAGACAATAACAAAATTCCTTCCATACTCCGCTACGCAAAATAAAACGAATATTAGAATTGGTTATCAAATTGATGGGCGATAACGTGGAGCATAAGATTTGAATTTTGAAGTCTAATTATATTATTAGTATAAGTGGAGGCATTGGTGAAGGTAAAGGTGAAAGAGGAACATGATTAACACAAAATGTTATTGATTAAAAGATGCTTTGAAGCAACTTTATCACCGTAATCATTCAAATTATTGTAGCTACAATCAAAATTCAAACATAATAATTATTGTTTATTTAAATGAACCGTTGATTTGTTCGTGTTAAACCATAATAGTAATATATTTTTCGTGGTATCAAATGCAAGAATAGAGGTGTTTAAAAAATAAAATTTGGAAAAAATCTGGGAACCAATTTGCAAAAATAGAGTAGAAACTTTGGATTTACCTTTTTTTTTTTTTTTTTTTTAACTAAAATACTTCATCAATGACGTCTTTGGAAAGACGCAAATTGAAAAAAATAAAAAATAAAAAAATAATAATCTTCTCCTGAATTGTTTTCTATGTATTTGTTTGATAGGTTTTATCTTTTACATTTTGATTATTAGGTTTCATTTTTTTCCTTTTAAATTAATTACTTAATTAAATAATACAGATTAAAAAATGTCCAATTTTTTTTTCATCCGCAATAGATTGTCTTATCATAATAGATAATAGATATAGATAATAGTCTTATTTGGAATATTGAATCCCTTATTTAGGTCTCTTTGCCTTCTGCCTGGCGCCGTCGTCTTCTCATTCTATGAAATAATATACAAAATTATCTGTCGCTCCAACTTTTCAGGGTCGTTAGTTCGTTCATTTGACAATTTCAACGCTCTCGGACCGTGTAGGTTGGGTTGCGTTGGCTTCTCTATTGGGCCGTGTATTCTGTTTGGGCCTGTGGAAGCAGGGCTCCAGAAATAATCAAGCCCATATCAGAAGCTTCAATAAAAACCAAGTTTGAGGGACTTCTCAAACCCTAGAACGCTTCGTATTGTGCAGCCAAGAAGAGACATTTCATCTGGTCTAAAATCTCTCTTCCCCTCAATTTTCTGCTGTTCTTCTTGTGTTTGTATTTCTGTAGTTCCTAATACTTGTTCTTCTTCTTGTTTTTCTGGGTTTCTTTTTCCTAACTTTGCTAGCTTGTCAACGTGCAGTGAAAAATGTCGGTCGGAGAAGTTGCTTGCTCCTACGCTGCTCTCATCCTCTACGACGACAATATCCCTATTACCGTATGCTTCTCTTTAATCCTGGCACCCTCCTTCAGTATTTAATTTCTTTCTTACTCATAACTTTCGGGATCGAAGTAATTAGTAGGATATTTTTACCATGTGTTGTTCTATGCGATTGGCTGGATATTGGGACTATCTCAACGTTTTGCGTGATTTCCGTTTCGAATAGATCAATTACGAAACATGTAGTATCAAAATATTATTCGGTTTTTTGTACATTTATATTTATAAAAGTAATTCTTATAATCTAGATCTTCTTCTTCTGCTATTATTATTCCCTTGTTCGCCGCTTTATGAAATTTGTTCCAATATATGATAATTGCCTTTTCTTTTTTGTTTCTATGTTAGTGTTCGTTTGCTAATTATTTGTAAGGAAATAAGACACCAAAATTTGTTTTTTAAACAGGCGGAAAAGATTGCTGCGCTTGTAAAGGCGGCTAATGTGGACGGTGTGGAGTCTTACTGGTACAGTCTTTTTGCTAAGTTGGCCGAGAAGCGTAACATTGGTGATTTAATCCTCAATGTTGGGGCTGGTGGTGGTGCCTCAGTCGCAGCTGCTGTCCCAGCTGGTGGAGCTGCTGGTGGCGCTGCTGCCGCAGCTGCTCCTCCACCTGAAGAGAAAAAGGTAACCAATAGCCATTTCATTCCGAGGAATGACATGTTATAGTCTATTCTATTTTGGAAGCTTGGTTTTGAGGTACTAATATGTACATCATCATGACATGAGATTGGATTACTTTTGTTACTTGCAGGAAGAACCTAAGGAAGAGAGTGACGATGATATGGGATTCAGTTTGTTCGATTAGGTCGAGATATGGTTTCGCATATTTTGTTCTAGGTTGATTATCTTTTAAATGTCTGATGGGGCCCTTGTTATTTTACAGAGATGTAATTTTGGACATCCTTGACAAATTTGCCAGAAGTTTTGATTTTAATATGATCTGATTTCATCTTTTTGTTTGAGATATATTATAATTATATATATCATATGTGTCCTCTCAGTATGGTAGTTTTCTGATATGTTGGTTATTTTTCTGCGATTGCGACATGTTGCATCTCCTC

mRNA sequence

ATGGAAGGGAGAGAGGCAAAAGCAGAGGACTGGTGCTTCGTGTGCAAGGATGGTGGAGATTTGATTCTCTGCAATCATGGGTTAGTTTCTTTGGTTACACTCTGTTTCCATGGCCTCCCTTCATATTCTCCGCATGATCTCATCCTTAGTTTATGCATTGCTTTTTCTTTCAGCAACTGCTCAAAGGTGTACCATCTGGAATGCCTGGGATTCGACTGCCAATCTTCCTCTCAAATTGAAGAACATTGGAGCTGCGATTGCCATTCTTGTTCTTCCTGCGAAGGAGCCTCGGAGGTCCACTGCTTCTGCTGTCCAGCTTCTTTCTGCAAAAACTGTATCAAGTCTGTAAAGTTTATTCCCTTGCGACCCAACAAAGGGCTCTGCGCAGATTGCTGGACCCTCGTTCGTCTTGCGGAAAAACTTTCCTTCTCCAAGAAAGCTGTGGATTTCGAAGACAGAGATACACACGAGTGCCTTTTCAAAGAGTATTGGGATATTGTGAAAGAAGAAGAAGGGTTAAGCAGAGGCGATCTTGTGGCTGTGGAAGAAGCCTCTTCATCGAACAAGGGCATAAGGCAAATTATGAAGCGCACCACCCCAAAACCAACCCCAACGCCTGCGGCCGAGACCCTGCAAGATAGAGACGCCAAGAAATTCGTCGGCTGGGGATCCAAACCTCTCATTGAATTTCTCAATTCCTTTGGCGTAGATTCAACCAAGCAGTTGTCTCCATGCGAAGTCAGTTCCATCATCTTGAAGTACGTTGAAGAGAATGACCTCATCCATCCCATAAATAAGAAGAAAGTCATATGTGATGGACCCCTGCATCTCATTTTCAAGAAGAACACTGTACCCATGAAGCACATTAATCTTCTCTTGGGGCCGCATCTTTTTCATCCCAATAATGCCAATAATAGGAATAATGGCATTGGCAACAAGAGATCATGTTTGAAACCGGATCAACCACAACTTAATGGGGATGTTGCTTTGAACTTGAACAAGCACCACAAAACATTGAGCTGCTCTGATCAGGACAAACCAACCTTTGCATCAGTGGTTCCCCATAACATCAATCTCGTCTACTTGAGGAGGAGCTTAGTGGAGGATCTTTTAAGACAGCAACCCGAAACCTTCGAGGACATGGTGGTGGGAAGTTTTGTTAAGGTCGTCGACACAAATTCTACGCAACTTCATTCTAAACCCAAAATTTCTCAACATCTGTTGCAAGTTACAGCTGTAAACAAAATGTCGAGCGCAGATGGAAGGAGCGTTGTGTTGCATGTTTGGAGGTTGCCCAACATTCAAATTTCCATGCTCTCTGATTCTGACTTAACTGAGGAAGATTGTCAGGATCTTAAGGAAAAGATGGCAAAGGGTTTGCTCCAAAGACCCACCGTTGAAGAGATTGAAAAGAAGGCTCGGATTCTTCATCAGGATATTAGGAAGAACAGCAAAGACAAAGTGCTTTTCAGTGTCATCGCTAACACTATCAATGCCCCACTCAACTTCACCCTTGTTATGGGGGTTATCCTTCCAACTACCTGCGACGCTGGAATGGTCGGAGTTGGCAGCAGATTCGAGGGCGTTTCCACACTTGGCTACGGTCCTGACGTTCTCAATCAACTCCTGAGTGCGATTGTGGTGAGACAAAATTTGGGAGAGTTGTTGGGGGCAAATCACGAGGTTGACCTTCCAGACACCGGCGTTGTTGTAGTTTGGGAGTGGGGGCTTGGGTTGGGTGTCGGCGGTGGACATGCGATAGGGCGTGGATACAAGGGTGCATGGCTCCAGGGAGGGGTTGAGGGGGAGGAGATAGTAGACTTGTCCGCCCTGAAGCTCCTCCTTGTGGTGAAGGGCCTCCGAGAATATGGTCCGGCTTTTGAATATGGCGTGCCCTGGATATTCACCCGTAATGCACTCCGCCGTTATTGGCGTGTACAACTCCATTATCCCCCCATTAAGGTTCCTAATACTTGTTCTTCTTCTTGTTTTTCTGGGTTTCTTTTTCCTAACTTTGCTAGCTTGTCAACGTGCAGTGAAAAATGTCGGTCGGAGAAGTTGCTTGCTCCTACGCTGCTCTCATCCTCTACGACGACAATATCCCTATTACCGATATTTTTACCATGTGTTGTTCTATGCGATTGGCTGGATATTGGGACTATCTCAACGTTTTGCGTGATTTCCGTTTCGAATAGATCAATTACGAAACATGCGGAAAAGATTGCTGCGCTTGTAAAGGCGGCTAATGTGGACGGTGTGGAGTCTTACTGGTACAGTCTTTTTGCTAAGTTGGCCGAGAAGCGTAACATTGGTGATTTAATCCTCAATGTTGGGGCTGGTGGTGGTGCCTCAGTCGCAGCTGCTGTCCCAGCTGGTGGAGCTGCTGGTGGCGCTGCTGCCGCAGCTGCTCCTCCACCTGAAGAGAAAAAGGAAGAACCTAAGGAAGAGAGTGACGATGATATGGGATTCAGTTTGTTCGATTAGGTCGAGATATGGTTTCGCATATTTTGTTCTAGGTTGATTATCTTTTAAATGTCTGATGGGGCCCTTGTTATTTTACAGAGATGTAATTTTGGACATCCTTGACAAATTTGCCAGAAGTTTTGATTTTAATATGATCTGATTTCATCTTTTTGTTTGAGATATATTATAATTATATATATCATATGTGTCCTCTCAGTATGGTAGTTTTCTGATATGTTGGTTATTTTTCTGCGATTGCGACATGTTGCATCTCCTC

Coding sequence (CDS)

ATGGAAGGGAGAGAGGCAAAAGCAGAGGACTGGTGCTTCGTGTGCAAGGATGGTGGAGATTTGATTCTCTGCAATCATGGGTTAGTTTCTTTGGTTACACTCTGTTTCCATGGCCTCCCTTCATATTCTCCGCATGATCTCATCCTTAGTTTATGCATTGCTTTTTCTTTCAGCAACTGCTCAAAGGTGTACCATCTGGAATGCCTGGGATTCGACTGCCAATCTTCCTCTCAAATTGAAGAACATTGGAGCTGCGATTGCCATTCTTGTTCTTCCTGCGAAGGAGCCTCGGAGGTCCACTGCTTCTGCTGTCCAGCTTCTTTCTGCAAAAACTGTATCAAGTCTGTAAAGTTTATTCCCTTGCGACCCAACAAAGGGCTCTGCGCAGATTGCTGGACCCTCGTTCGTCTTGCGGAAAAACTTTCCTTCTCCAAGAAAGCTGTGGATTTCGAAGACAGAGATACACACGAGTGCCTTTTCAAAGAGTATTGGGATATTGTGAAAGAAGAAGAAGGGTTAAGCAGAGGCGATCTTGTGGCTGTGGAAGAAGCCTCTTCATCGAACAAGGGCATAAGGCAAATTATGAAGCGCACCACCCCAAAACCAACCCCAACGCCTGCGGCCGAGACCCTGCAAGATAGAGACGCCAAGAAATTCGTCGGCTGGGGATCCAAACCTCTCATTGAATTTCTCAATTCCTTTGGCGTAGATTCAACCAAGCAGTTGTCTCCATGCGAAGTCAGTTCCATCATCTTGAAGTACGTTGAAGAGAATGACCTCATCCATCCCATAAATAAGAAGAAAGTCATATGTGATGGACCCCTGCATCTCATTTTCAAGAAGAACACTGTACCCATGAAGCACATTAATCTTCTCTTGGGGCCGCATCTTTTTCATCCCAATAATGCCAATAATAGGAATAATGGCATTGGCAACAAGAGATCATGTTTGAAACCGGATCAACCACAACTTAATGGGGATGTTGCTTTGAACTTGAACAAGCACCACAAAACATTGAGCTGCTCTGATCAGGACAAACCAACCTTTGCATCAGTGGTTCCCCATAACATCAATCTCGTCTACTTGAGGAGGAGCTTAGTGGAGGATCTTTTAAGACAGCAACCCGAAACCTTCGAGGACATGGTGGTGGGAAGTTTTGTTAAGGTCGTCGACACAAATTCTACGCAACTTCATTCTAAACCCAAAATTTCTCAACATCTGTTGCAAGTTACAGCTGTAAACAAAATGTCGAGCGCAGATGGAAGGAGCGTTGTGTTGCATGTTTGGAGGTTGCCCAACATTCAAATTTCCATGCTCTCTGATTCTGACTTAACTGAGGAAGATTGTCAGGATCTTAAGGAAAAGATGGCAAAGGGTTTGCTCCAAAGACCCACCGTTGAAGAGATTGAAAAGAAGGCTCGGATTCTTCATCAGGATATTAGGAAGAACAGCAAAGACAAAGTGCTTTTCAGTGTCATCGCTAACACTATCAATGCCCCACTCAACTTCACCCTTGTTATGGGGGTTATCCTTCCAACTACCTGCGACGCTGGAATGGTCGGAGTTGGCAGCAGATTCGAGGGCGTTTCCACACTTGGCTACGGTCCTGACGTTCTCAATCAACTCCTGAGTGCGATTGTGGTGAGACAAAATTTGGGAGAGTTGTTGGGGGCAAATCACGAGGTTGACCTTCCAGACACCGGCGTTGTTGTAGTTTGGGAGTGGGGGCTTGGGTTGGGTGTCGGCGGTGGACATGCGATAGGGCGTGGATACAAGGGTGCATGGCTCCAGGGAGGGGTTGAGGGGGAGGAGATAGTAGACTTGTCCGCCCTGAAGCTCCTCCTTGTGGTGAAGGGCCTCCGAGAATATGGTCCGGCTTTTGAATATGGCGTGCCCTGGATATTCACCCGTAATGCACTCCGCCGTTATTGGCGTGTACAACTCCATTATCCCCCCATTAAGGTTCCTAATACTTGTTCTTCTTCTTGTTTTTCTGGGTTTCTTTTTCCTAACTTTGCTAGCTTGTCAACGTGCAGTGAAAAATGTCGGTCGGAGAAGTTGCTTGCTCCTACGCTGCTCTCATCCTCTACGACGACAATATCCCTATTACCGATATTTTTACCATGTGTTGTTCTATGCGATTGGCTGGATATTGGGACTATCTCAACGTTTTGCGTGATTTCCGTTTCGAATAGATCAATTACGAAACATGCGGAAAAGATTGCTGCGCTTGTAAAGGCGGCTAATGTGGACGGTGTGGAGTCTTACTGGTACAGTCTTTTTGCTAAGTTGGCCGAGAAGCGTAACATTGGTGATTTAATCCTCAATGTTGGGGCTGGTGGTGGTGCCTCAGTCGCAGCTGCTGTCCCAGCTGGTGGAGCTGCTGGTGGCGCTGCTGCCGCAGCTGCTCCTCCACCTGAAGAGAAAAAGGAAGAACCTAAGGAAGAGAGTGACGATGATATGGGATTCAGTTTGTTCGATTAG

Protein sequence

MEGREAKAEDWCFVCKDGGDLILCNHGLVSLVTLCFHGLPSYSPHDLILSLCIAFSFSNCSKVYHLECLGFDCQSSSQIEEHWSCDCHSCSSCEGASEVHCFCCPASFCKNCIKSVKFIPLRPNKGLCADCWTLVRLAEKLSFSKKAVDFEDRDTHECLFKEYWDIVKEEEGLSRGDLVAVEEASSSNKGIRQIMKRTTPKPTPTPAAETLQDRDAKKFVGWGSKPLIEFLNSFGVDSTKQLSPCEVSSIILKYVEENDLIHPINKKKVICDGPLHLIFKKNTVPMKHINLLLGPHLFHPNNANNRNNGIGNKRSCLKPDQPQLNGDVALNLNKHHKTLSCSDQDKPTFASVVPHNINLVYLRRSLVEDLLRQQPETFEDMVVGSFVKVVDTNSTQLHSKPKISQHLLQVTAVNKMSSADGRSVVLHVWRLPNIQISMLSDSDLTEEDCQDLKEKMAKGLLQRPTVEEIEKKARILHQDIRKNSKDKVLFSVIANTINAPLNFTLVMGVILPTTCDAGMVGVGSRFEGVSTLGYGPDVLNQLLSAIVVRQNLGELLGANHEVDLPDTGVVVVWEWGLGLGVGGGHAIGRGYKGAWLQGGVEGEEIVDLSALKLLLVVKGLREYGPAFEYGVPWIFTRNALRRYWRVQLHYPPIKVPNTCSSSCFSGFLFPNFASLSTCSEKCRSEKLLAPTLLSSSTTTISLLPIFLPCVVLCDWLDIGTISTFCVISVSNRSITKHAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD

Homology

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BLAST of Clc05G00340 vs. NCBI nr
Match: XP_008437776.1 (PREDICTED: uncharacterized protein At5g08430-like isoform X1 [Cucumis melo])

HSP 1 Score: 700.7 bits (1807), Expect = 1.5e-197
Identity = 367/518 (70.85%), Postives = 411/518 (79.34%), Query Frame = 0


Query: 1   MEGREAKAEDWCFVCKDGGDLILCNHGLVSLVTLCFHGLPSYSPHDLILSL-CIAFSFSN 60
           ME R++KAEDWCFVCKDGGDLILCN+GL S   L    +P  S H ++  +    F FSN
Sbjct: 1   MEERDSKAEDWCFVCKDGGDLILCNNGLSSHSFL----MPRPSSHHILCMISSFLFLFSN 60

Query: 61  CSKVYHLECLGFDCQ------SSSQIEEHWSCDCHSCSSCEGASEVHCFCCPASFCKNCI 120
           CSKVYHLECLG D        ++S I+E W+CDCH CSSC+ ASE HCFCCP SFC NCI
Sbjct: 61  CSKVYHLECLGLDSDYHCPTPTTSLIQEDWTCDCHHCSSCKEASEFHCFCCPTSFCNNCI 120

Query: 121 KSVKFIPLRPNKGLCADCWTLVRLAEKLSFSKKAVDFEDRDTHECLFKEYWDIVKEEEGL 180
           +SVKFI LRP+KGLC+DCWTLVRLAEKLSFSKKAVDFEDRDTHECLFKEYWDIVK+EEG+
Sbjct: 121 ESVKFIHLRPSKGLCSDCWTLVRLAEKLSFSKKAVDFEDRDTHECLFKEYWDIVKQEEGI 180

Query: 181 SRGDLVAVEEASSSNKGIRQIMKRTTPKPTPTPAAETL-------------------QDR 240
           SR DLVAVE+  SSNK  R  MK   P PTPTP  + L                    + 
Sbjct: 181 SRHDLVAVEQTRSSNKA-RSRMKGFIPTPTPTPTPKRLPNTLQHEHTNSKSKSKSKPNNN 240

Query: 241 DAKKFVGWGSKPLIEFLNSFGVDSTKQLSPCEVSSIILKYVEENDLIHPINKKKVICDGP 300
           +  KF+GWGSKPLIEFL SFGVDSTKQLSP EVSSIILKYV++NDLIHPIN KKVICD  
Sbjct: 241 NTHKFLGWGSKPLIEFLTSFGVDSTKQLSPSEVSSIILKYVQQNDLIHPINNKKVICDRL 300

Query: 301 LHLIFKKNTVPMKHINLLLGPHLFHPNNANNRNNGIGNKRSCLKPDQPQLNGDVALNLNK 360
           LHLIFKKNT+ MKHI+LLLGPH FH    NN N+GIG+ RS  +PDQPQ+NGD A  LNK
Sbjct: 301 LHLIFKKNTISMKHIDLLLGPHFFHD---NNENHGIGDNRSRSEPDQPQINGDTA--LNK 360

Query: 361 HHKTLSCSDQDKPTFASVVPHNINLVYLRRSLVEDLLRQQPETFEDMVVGSFVKVVDTNS 420
           H+KT +CS QDKPTFASVVPHNINLVYLRRSLVEDLL+ QPE+FED VVGSFVK++DTNS
Sbjct: 361 HYKTSNCS-QDKPTFASVVPHNINLVYLRRSLVEDLLK-QPESFEDKVVGSFVKIMDTNS 420

Query: 421 TQLHSKPKISQHLLQVTAVNKMSSADGRSVVLHVWRLPNIQISMLSDSDLTEEDCQDLKE 480
           +QL SK +ISQ LLQVTAV+KMSS DG+SVVLHVWRLPNI ISMLSDSDLTEEDC+DLKE
Sbjct: 421 SQLQSKGRISQRLLQVTAVSKMSSRDGKSVVLHVWRLPNIPISMLSDSDLTEEDCRDLKE 480

Query: 481 KMAKGLLQRPTVEEIEKKARILHQDIRKNSKDKVLFSV 493
           KM KGLLQRPTVEEIE KARILHQDIRKN  +K L ++
Sbjct: 481 KMEKGLLQRPTVEEIENKARILHQDIRKNWMEKELVNL 506

[Close]

BLAST of Clc05G00340 vs. NCBI nr
Match: XP_038902032.1 (zinc finger CCCH domain-containing protein 44-like isoform X1 [Benincasa hispida])

HSP 1 Score: 696.8 bits (1797), Expect = 2.2e-196
Identity = 366/489 (74.85%), Postives = 395/489 (80.78%), Query Frame = 0


Query: 1   MEGREAKAEDWCFVCKDGGDLILCNHGLVSLVTLCFHGLPSYSPHDLILSLCIAFSFSNC 60
           MEGREAKAEDWCFVCKDGGDLILCN+G                               NC
Sbjct: 1   MEGREAKAEDWCFVCKDGGDLILCNNG-------------------------------NC 60

Query: 61  SKVYHLECLGF----DC--QSSSQIEEHWSCDCHSCSSCEGASEVHCFCCPASFCKNCIK 120
           SKVYHL+CLGF    DC  +++ QIEE W+CDCHSCSSCE ASEVHCFCCP SFCKNCI+
Sbjct: 61  SKVYHLDCLGFHSDSDCDGETAFQIEEDWTCDCHSCSSCEEASEVHCFCCPTSFCKNCIE 120

Query: 121 SVKFIPLRPNKGLCADCWTLVRLAEKLSFSKKAVDFEDRDTHECLFKEYWDIVKEEEGLS 180
           SVKFIPLRPNKGLC +CWTLVRLAEKLSFSKKAVDFEDRDTHECLFKEYW+IVKEEEGL+
Sbjct: 121 SVKFIPLRPNKGLCTECWTLVRLAEKLSFSKKAVDFEDRDTHECLFKEYWEIVKEEEGLT 180

Query: 181 RGDLVAVEEASSSNKGIRQIMKRTTPKPTPTPAAETLQDRDAKKFVGWGSKPLIEFLNSF 240
           RGDLVAVEEA SS K      ++     TPTP A+TLQDRD KKFVGWGSKPLIEFL SF
Sbjct: 181 RGDLVAVEEACSSKKS-----RKKMTDTTPTPVAKTLQDRDTKKFVGWGSKPLIEFLTSF 240

Query: 241 GVDSTKQLSPCEVSSIILKYVEENDLIHPINKKKVICDGPLHLIFKKNTVPMKHINLLLG 300
           GVDSTKQLSP EVSSIILKYV+ENDLIHPINKKKVICDGPLHLIFKKNTV MKHINLLLG
Sbjct: 241 GVDSTKQLSPSEVSSIILKYVQENDLIHPINKKKVICDGPLHLIFKKNTVAMKHINLLLG 300

Query: 301 PHLFHPNNANNRNNGIGNKRSCLKPDQPQLNGDVALNLNKHHKTLSCSDQDKPTFASVVP 360
           PHLFH N AN  N  I  KRS L+PDQPQ+NGDVA  LNKHH+TLS S +DKPTFAS+VP
Sbjct: 301 PHLFHANEAN--NGIISKKRSRLEPDQPQINGDVA--LNKHHRTLSGS-EDKPTFASLVP 360

Query: 361 HNINLVYLRRSLVEDLLRQQPETFEDMVVGSFVKVVDTNSTQLHSKPKISQHLLQVTAVN 420
           HNI LVYL RSLVEDLL+Q  E+FED VVGSFV V+DTNS+QLHSK KISQ LLQVTAV 
Sbjct: 361 HNIKLVYLTRSLVEDLLKQL-ESFEDKVVGSFVMVIDTNSSQLHSKGKISQQLLQVTAV- 420

Query: 421 KMSSADGRSVVLHVWRLPNIQISMLSDSDLTEEDCQDLKEKMAKGLLQRPTVEEIEKKAR 480
              S  G  +VLH   LPNIQISMLSDSDLTEEDC DLKE++AKGL QRPTV+EIEKKA+
Sbjct: 421 ---STGGTGIVLHFCGLPNIQISMLSDSDLTEEDCMDLKERIAKGLHQRPTVKEIEKKAQ 443

Query: 481 ILHQDIRKN 484
           ILH+DIRKN
Sbjct: 481 ILHEDIRKN 443

[Close]

BLAST of Clc05G00340 vs. NCBI nr
Match: XP_031737764.1 (zinc finger CCCH domain-containing protein 19 [Cucumis sativus])

HSP 1 Score: 684.5 bits (1765), Expect = 1.1e-192
Identity = 357/511 (69.86%), Postives = 398/511 (77.89%), Query Frame = 0


Query: 1   MEGREAKAEDWCFVCKDGGDLILCNHGLVSLVTLCFHGLPSYSPHDLILSLCIAFSFSNC 60
           ME  ++KAEDWCFVCKDGGDLILCN+G                               NC
Sbjct: 1   MEEGDSKAEDWCFVCKDGGDLILCNNG-------------------------------NC 60

Query: 61  SKVYHLECLGFD----CQSSSQIEEHWSCDCHSCSSCEGASEVHCFCCPASFCKNCIKSV 120
           SKVYHLECLG D    C ++S I++ W+CDCHSCSSC+ ASE HCFCCP SFC NCIKSV
Sbjct: 61  SKVYHLECLGLDSDYHCPTTSPIQQEWTCDCHSCSSCKEASEFHCFCCPTSFCNNCIKSV 120

Query: 121 KFIPLRPNKGLCADCWTLVRLAEKLSFSKKAVDFEDRDTHECLFKEYWDIVKEEEGLSRG 180
           KFI LRPNKGLC+DCWTLVRLAEKLSFSKKAVDFEDRDTHECLFKEYWDIVK+EEGLSR 
Sbjct: 121 KFIHLRPNKGLCSDCWTLVRLAEKLSFSKKAVDFEDRDTHECLFKEYWDIVKQEEGLSRH 180

Query: 181 DLVAVEEASSSNKGIRQIMKRTTPKPTPTPAAETLQDRDAK---------------KFVG 240
            LVAVE+  SS K  RQ MK   P PT  P+    +  D+K               KF+G
Sbjct: 181 VLVAVEQTRSSKKATRQ-MKGYIPTPTRLPSTLQHEHTDSKSKSKSKPKPNNNNTHKFLG 240

Query: 241 WGSKPLIEFLNSFGVDSTKQLSPCEVSSIILKYVEENDLIHPINKKKVICDGPLHLIFKK 300
           WGSKPLIEFL SFGVDSTK+LSP EVSSIILKYV++NDLIHPIN KKVICD PLHLIFKK
Sbjct: 241 WGSKPLIEFLTSFGVDSTKELSPSEVSSIILKYVQQNDLIHPINNKKVICDRPLHLIFKK 300

Query: 301 NTVPMKHINLLLGPHLFHPNNANNRNNGIGNKRSCLKPDQPQLNGDVALNLNKHHKTLSC 360
           NTV MKHI+LLLGPHLFH    NN N+GIG KRS  +PD+PQ+NGD    LNK++KTL+C
Sbjct: 301 NTVSMKHIDLLLGPHLFHD---NNENHGIGEKRSSFEPDEPQINGDA--GLNKYYKTLNC 360

Query: 361 SDQDKPTFASVVPHNINLVYLRRSLVEDLLRQQPETFEDMVVGSFVKVVDTNSTQLHSKP 420
           S QDKPTFASVVPHNINLVYLRRSLVEDLL+ QPE+FED VVGSFVK++DTNS+Q  SK 
Sbjct: 361 S-QDKPTFASVVPHNINLVYLRRSLVEDLLK-QPESFEDKVVGSFVKIIDTNSSQFQSKV 420

Query: 421 KISQHLLQVTAVNKMSSADGRSVVLHVWRLPNIQISMLSDSDLTEEDCQDLKEKMAKGLL 480
           KISQ LLQVTAV+KMSS+DGRS+VLHVW LPNI ISMLSDSD+TEEDC+DLKEKM KGLL
Sbjct: 421 KISQQLLQVTAVSKMSSSDGRSIVLHVWGLPNIPISMLSDSDVTEEDCRDLKEKMEKGLL 472

Query: 481 QRPTVEEIEKKARILHQDIRKNSKDKVLFSV 493
           QRP+VEEIE KARILHQDIRKN  +K L ++
Sbjct: 481 QRPSVEEIENKARILHQDIRKNWMEKELVNL 472

[Close]

BLAST of Clc05G00340 vs. NCBI nr
Match: XP_008437778.1 (PREDICTED: uncharacterized protein At5g08430-like isoform X2 [Cucumis melo])

HSP 1 Score: 682.9 bits (1761), Expect = 3.3e-192
Identity = 358/517 (69.25%), Postives = 398/517 (76.98%), Query Frame = 0


Query: 1   MEGREAKAEDWCFVCKDGGDLILCNHGLVSLVTLCFHGLPSYSPHDLILSLCIAFSFSNC 60
           ME R++KAEDWCFVCKDGGDLILCN+G                               NC
Sbjct: 1   MEERDSKAEDWCFVCKDGGDLILCNNG-------------------------------NC 60

Query: 61  SKVYHLECLGFDCQ------SSSQIEEHWSCDCHSCSSCEGASEVHCFCCPASFCKNCIK 120
           SKVYHLECLG D        ++S I+E W+CDCH CSSC+ ASE HCFCCP SFC NCI+
Sbjct: 61  SKVYHLECLGLDSDYHCPTPTTSLIQEDWTCDCHHCSSCKEASEFHCFCCPTSFCNNCIE 120

Query: 121 SVKFIPLRPNKGLCADCWTLVRLAEKLSFSKKAVDFEDRDTHECLFKEYWDIVKEEEGLS 180
           SVKFI LRP+KGLC+DCWTLVRLAEKLSFSKKAVDFEDRDTHECLFKEYWDIVK+EEG+S
Sbjct: 121 SVKFIHLRPSKGLCSDCWTLVRLAEKLSFSKKAVDFEDRDTHECLFKEYWDIVKQEEGIS 180

Query: 181 RGDLVAVEEASSSNKGIRQIMKRTTPKPTPTPAAETL-------------------QDRD 240
           R DLVAVE+  SSNK  R  MK   P PTPTP  + L                    + +
Sbjct: 181 RHDLVAVEQTRSSNKA-RSRMKGFIPTPTPTPTPKRLPNTLQHEHTNSKSKSKSKPNNNN 240

Query: 241 AKKFVGWGSKPLIEFLNSFGVDSTKQLSPCEVSSIILKYVEENDLIHPINKKKVICDGPL 300
             KF+GWGSKPLIEFL SFGVDSTKQLSP EVSSIILKYV++NDLIHPIN KKVICD  L
Sbjct: 241 THKFLGWGSKPLIEFLTSFGVDSTKQLSPSEVSSIILKYVQQNDLIHPINNKKVICDRLL 300

Query: 301 HLIFKKNTVPMKHINLLLGPHLFHPNNANNRNNGIGNKRSCLKPDQPQLNGDVALNLNKH 360
           HLIFKKNT+ MKHI+LLLGPH FH    NN N+GIG+ RS  +PDQPQ+NGD A  LNKH
Sbjct: 301 HLIFKKNTISMKHIDLLLGPHFFHD---NNENHGIGDNRSRSEPDQPQINGDTA--LNKH 360

Query: 361 HKTLSCSDQDKPTFASVVPHNINLVYLRRSLVEDLLRQQPETFEDMVVGSFVKVVDTNST 420
           +KT +CS QDKPTFASVVPHNINLVYLRRSLVEDLL+ QPE+FED VVGSFVK++DTNS+
Sbjct: 361 YKTSNCS-QDKPTFASVVPHNINLVYLRRSLVEDLLK-QPESFEDKVVGSFVKIMDTNSS 420

Query: 421 QLHSKPKISQHLLQVTAVNKMSSADGRSVVLHVWRLPNIQISMLSDSDLTEEDCQDLKEK 480
           QL SK +ISQ LLQVTAV+KMSS DG+SVVLHVWRLPNI ISMLSDSDLTEEDC+DLKEK
Sbjct: 421 QLQSKGRISQRLLQVTAVSKMSSRDGKSVVLHVWRLPNIPISMLSDSDLTEEDCRDLKEK 478

Query: 481 MAKGLLQRPTVEEIEKKARILHQDIRKNSKDKVLFSV 493
           M KGLLQRPTVEEIE KARILHQDIRKN  +K L ++
Sbjct: 481 MEKGLLQRPTVEEIENKARILHQDIRKNWMEKELVNL 478

[Close]

BLAST of Clc05G00340 vs. NCBI nr
Match: XP_038902039.1 (zinc finger CCCH domain-containing protein 44-like isoform X2 [Benincasa hispida])

HSP 1 Score: 677.6 bits (1747), Expect = 1.4e-190
Identity = 368/538 (68.40%), Postives = 402/538 (74.72%), Query Frame = 0


Query: 1   MEGREAKAEDWCFVCKDGGDLILCNHGLVSLVTLCFHGLPSYSPHDLILSLCIAFSFSNC 60
           MEGREAKAEDWCFVCKDGGDLILCN+G                               NC
Sbjct: 1   MEGREAKAEDWCFVCKDGGDLILCNNG-------------------------------NC 60

Query: 61  SKVYHLECLGF----DC--QSSSQIEEHWSCDCHSCSSCEGASEVHCFCCPASFCKNCIK 120
           SKVYHL+CLGF    DC  +++ QIEE W+CDCHSCSSCE ASEVHCFCCP SFCKNCI+
Sbjct: 61  SKVYHLDCLGFHSDSDCDGETAFQIEEDWTCDCHSCSSCEEASEVHCFCCPTSFCKNCIE 120

Query: 121 SVKFIPLRPNKGLCADCWTLVRLAEKLSFSKKAVDFEDRDTHECLFKEYWDIVKEEEGLS 180
           SVKFIPLRPNKGLC +CWTLVRLAEKLSFSKKAVDFEDRDTHECLFKEYW+IVKEEEGL+
Sbjct: 121 SVKFIPLRPNKGLCTECWTLVRLAEKLSFSKKAVDFEDRDTHECLFKEYWEIVKEEEGLT 180

Query: 181 RGDLVAVEEASSSNKGIRQIMKRTTPKPTPTPAAETLQDRDAKKFVGWGSKPLIEFLNSF 240
           RGDLVAVEEA SS K      ++     TPTP A+TLQDRD KKFVGWGSKPLIEFL SF
Sbjct: 181 RGDLVAVEEACSSKKS-----RKKMTDTTPTPVAKTLQDRDTKKFVGWGSKPLIEFLTSF 240

Query: 241 GVDSTKQLSPCEVSSIILKYVEENDLIHPINKKKVICDGPLHLIFKKNTVPMKHINLLLG 300
           GVDSTKQLSP EVSSIILKYV+ENDLIHPINKKKVICDGPLHLIFKKNTV MKHINLLLG
Sbjct: 241 GVDSTKQLSPSEVSSIILKYVQENDLIHPINKKKVICDGPLHLIFKKNTVAMKHINLLLG 300

Query: 301 PHLFHPNNANNRNNGIGNKRSCLKPDQPQLNGDVALNLNKHHKTLSCSDQDKPTFASVVP 360
           PHLFH N AN  N  I  KRS L+PDQPQ+NGDVA  LNKHH+TLS S +DKPTFAS+VP
Sbjct: 301 PHLFHANEAN--NGIISKKRSRLEPDQPQINGDVA--LNKHHRTLSGS-EDKPTFASLVP 360

Query: 361 HNINLVYLRRSLVEDLLRQQPETFEDMVVGSFVKVVDTNSTQLHSKPKISQHLLQVTAVN 420
           HNI LVYL RSLVEDLL+Q  E+FED VVGSFV V+DTNS+QLHSK KISQ LLQVTAV 
Sbjct: 361 HNIKLVYLTRSLVEDLLKQL-ESFEDKVVGSFVMVIDTNSSQLHSKGKISQQLLQVTAV- 420

Query: 421 KMSSADGRSVVLHVWRLPNIQISMLSDSDLTEEDCQDLKEKMAKGLLQRPTVEEIEKKAR 480
              S  G  +VLH   LPNIQISMLSDSDLTEEDC DLKE++AKGL QRPTV  + +  +
Sbjct: 421 ---STGGTGIVLHFCGLPNIQISMLSDSDLTEEDCMDLKERIAKGLHQRPTVRMVRELDK 480

Query: 481 ILHQDIRKNSKD--------------------------KVLFSVIANTINAPLNFTLV 507
           + +   R N K                           K L  VIA++ +APLNFTLV
Sbjct: 481 LQNLIDRANEKGRRNELYQLIEQRQRLKNEAEQPLPLLKQLPGVIADSTDAPLNFTLV 492

[Close]

BLAST of Clc05G00340 vs. ExPASy Swiss-Prot
Match: Q9SIV5 (Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=NERD PE=1 SV=3)

HSP 1 Score: 179.1 bits (453), Expect = 2.0e-43
Identity = 153/528 (28.98%), Postives = 234/528 (44.32%), Query Frame = 0


Query: 7    KAEDWCFVCKDGGDLILCNHGLVSLVTLCFHGLPSYSPHDLILSLCIAFSFSNCSKVYHL 66
            K ED CF+C DGGDL+LC+                                  C+K YH 
Sbjct: 597  KEEDVCFMCFDGGDLVLCDR-------------------------------RGCTKAYHP 656

Query: 67   ECLGFDCQSSSQIEEHWSCDCHSCSSCEGASEVHCFCCPASFCKNCIKSVKFIPLRPNKG 126
             C+  D ++  Q +  W+C  H CS CE  +   C+ C  S CK C K   F  +R NKG
Sbjct: 657  SCVDRD-EAFFQTKGKWNCGWHLCSKCEKTATYLCYTCMFSLCKGCAKDAVFFCIRGNKG 716

Query: 127  LCADCWTLVRLAEKLSFSKK--AVDFEDRDTHECLFKEYWDIVKEEEGLSRGDL------ 186
            LC  C   V+L E+    K+   +DF D+ + E LFK+YW  +K +  LS  +L      
Sbjct: 717  LCETCMETVKLIERKQQEKEPAQLDFNDKTSWEYLFKDYWIDLKTQLSLSPEELDQAKRP 776

Query: 187  VAVEEASSSNKGI---------------RQIMKRTTPKPTPTPAAETLQDRDAKKF---- 246
            +   E ++S +G                    KR T   + + +AE +     K      
Sbjct: 777  LKGHETNASKQGTASETDYVTDGGSDSDSSPKKRKTRSRSKSGSAEKILSSGDKNLSDET 836

Query: 247  VGWGSKPLIEFLNSFGVDSTKQLSPCEVSSIILKYVEENDLIHPINKKKVICDGPLHLIF 306
            + W SK L++ +          L   EV +++L Y++  +L  P  K +VICD  L  +F
Sbjct: 837  MEWASKELLDLVVHMRRGDRSFLPMLEVQTLLLAYIKRYNLRDPRRKSQVICDSRLQNLF 896

Query: 307  KKNTVPMKHINLLLGPHLFHPNNANNRNNGIGNKRSCLKPDQPQLNGDVALNLNKHHKTL 366
             K+ V    +  LL  H F     N  ++  G+     +P+       V ++ N  H   
Sbjct: 897  GKSHVGHFEMLNLLDSH-FLKKEQNQADDIQGDIVDTEEPNH------VDVDENLDHPVK 956

Query: 367  SCSDQDKPT---------------FASVVPHNINLVYLRRSLVEDLLRQQPETFEDMVVG 426
            S  D+ + T               FA+V  HNINL+YLRRSLVEDLL +    FE+ V  
Sbjct: 957  SGKDKKRKTRKKNVRKGRQSNLDDFAAVDMHNINLIYLRRSLVEDLL-EDSTAFEEKVAS 1016

Query: 427  SFVKV-VDTNSTQLHSKPKISQHLLQVTAVNK--------MSSADGRSVVLHVWRLPNIQ 484
            +FV++ +  N  Q          L+QV   +K          + D    +L++ +   I 
Sbjct: 1017 AFVRLRISGNQKQ------DLYRLVQVVGTSKAPEPYKVGKKTTDYVLEILNLDKTEVIS 1076

[Close]

BLAST of Clc05G00340 vs. ExPASy Swiss-Prot
Match: Q9SD34 (Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana OX=3702 GN=At3g51120 PE=2 SV=3)

HSP 1 Score: 171.8 bits (434), Expect = 3.3e-41
Identity = 142/515 (27.57%), Postives = 225/515 (43.69%), Query Frame = 0


Query: 4   REAKAEDWCFVCKDGGDLILCNHGLVSLVTLCFHGLPSYSPHDLILSLCIAFSFSNCSKV 63
           +E K ED CF+C DGGDL+LC+                                 NC K 
Sbjct: 105 KEDKEEDVCFICFDGGDLVLCDR-------------------------------RNCPKA 164

Query: 64  YHLECLGFDCQSSSQIEEHWSCDCHSCSSCEGASEVHCFCCPASFCKNCIKSVKFIPLRP 123
           YH  C+  D ++  +    W+C  H C +C+ AS   C+ C  S CK CIK   ++ +R 
Sbjct: 165 YHPACIKRD-EAFFRTTAKWNCGWHICGTCQKASSYMCYTCTFSVCKRCIKDADYVIVRG 224

Query: 124 NKGLCADCWTLVRLAEKLSFSKK---AVDFEDRDTHECLFKEYWDIVKEEEGLSRGDLVA 183
           N GLC  C   + L E ++        VDF+D+ + E LFK YW  +KEE  L+  +L  
Sbjct: 225 NMGLCGTCIKPIMLIENIAQGDNEAVKVDFDDKLSWEYLFKVYWLCLKEELSLTVDELTR 284

Query: 184 VE-------------EASSSNKGIRQI--------MKRTTPKPT-PTPAAETLQDRDAKK 243
                          E+ + +   R +         +RT+  PT P            KK
Sbjct: 285 ANNPWKEVPNTAPKVESQNDHTNNRALDVAVNGTKRRRTSDSPTLPNKLDGKNPSNILKK 344

Query: 244 FVG---WGSKPLIEFLNSFGVDSTKQLSPCEVSSIILKYVEENDLIHPINKKKVICDGPL 303
             G   W +K L+EF++      T  LS  +V  ++L Y+++ +L  P+ K +V+CD  L
Sbjct: 345 APGDTSWATKELLEFVSFMKNGDTSVLSQFDVQGLLLDYIKKKNLRDPLQKSQVLCDQML 404

Query: 304 HLIFKKNTVPMKHINLLLGPHLFHPNNANNRNNGIGNKRSCLKPDQPQLNGDVALNLNKH 363
             +F K  V    +  LL  H+             G     +     + +    +  ++ 
Sbjct: 405 VKLFGKQRVGHFEMLKLLESHVLIQEKPKGAKTTNGETTHAVPSQIEEDSVHDPMVRDRR 464

Query: 364 HKTLSCSD-----QDKPTFASVVPHNINLVYLRRSLVEDLLRQQPETFEDMVVGSFVKVV 423
            K    +D     ++   +A++  HNINL+YLRR  +E LL       ++ VVG+ +++ 
Sbjct: 465 RKMRRKTDGRVQNENLDAYAAIDVHNINLIYLRRKFLESLL-DDINKVDEKVVGTILRIK 524

Query: 424 DTNSTQLHSKPKISQH-LLQVTAVNK-----MSSADGRSVVLHVWRLPN---IQISMLSD 477
            + S Q     K+  H L+QV   +K        A    V+L +  L     I I  LSD
Sbjct: 525 VSGSDQ-----KLDIHRLVQVVGTSKAIASYQLGAKTTDVMLEILNLDKREVISIDQLSD 581

[Close]

BLAST of Clc05G00340 vs. ExPASy Swiss-Prot
Match: Q9FT92 (Uncharacterized protein At5g08430 OS=Arabidopsis thaliana OX=3702 GN=At5g08430 PE=1 SV=2)

HSP 1 Score: 161.8 bits (408), Expect = 3.4e-38
Identity = 107/309 (34.63%), Postives = 171/309 (55.34%), Query Frame = 0


Query: 176 GDLVAVEEASSSNKGIRQIMKRTTPKPTPTPAAETLQDRDAKKFVGWGSKPLIEFLNSFG 235
           GD+  VEE + S    R+  ++  PK                +FVGWGS+ LIEFL+S G
Sbjct: 2   GDITWVEEGNGSATSSRK--RKARPK--------------RFEFVGWGSRQLIEFLHSLG 61

Query: 236 VDSTKQLSPCEVSSIILKYVEENDLIHPINKKKVICDGPLHLIFKKNTVPMKHINLLLGP 295
            D+++ +S  +VS  I KY+ +  L+ P NKKKV+CD  L L+F   T+    +  LL  
Sbjct: 62  KDTSEMISRYDVSDTIAKYISKEGLLDPSNKKKVVCDKRLVLLFGTRTIFRMKVYDLLEK 121

Query: 296 HLFHPNNANNRNNGIGNKRSCLKPDQPQLNGDVALNLNKHHKTLSCSDQDKPTFASVVPH 355
           H         + N   +    L  D+PQ+   +  +     +T     + + TFA++V  
Sbjct: 122 HY--------KENQDDSDFDFLYEDEPQI---ICHSEKIAKRTSKVVKKPRGTFAAIVSD 181

Query: 356 NINLVYLRRSLVEDLLRQQPETFEDMVVGSFVKVVDTNSTQLHSKPKISQHLLQVTAVNK 415
           NI L+YLR+SLV++LL+  P+TFE  ++GSFV++    +  L   P     L+QVT V K
Sbjct: 182 NIKLLYLRKSLVQELLK-SPDTFEGKMLGSFVRIKSDPNDYLQKYP---YQLVQVTGVKK 241

Query: 416 MSSADGRSVVLHVWR-LPNIQISMLSDSDLTEEDCQDLKEKMAKGLLQRPTVEEIEKKAR 475
               D    +L V   + ++ IS+LSD + ++E+C+DL +++  GLL++PT+ E+E+KA+
Sbjct: 242 EHGTD--DFLLQVTNYVKDVSISVLSDDNFSQEECEDLHQRIKNGLLKKPTIVEMEEKAK 277

Query: 476 ILHQDIRKN 484
            LH+D  K+
Sbjct: 302 KLHKDQTKH 277

[Close]

BLAST of Clc05G00340 vs. ExPASy Swiss-Prot
Match: P52855 (60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 5.2e-23
Identity = 71/105 (67.62%), Postives = 82/105 (78.10%), Query Frame = 0


Query: 724 FCVISVSNRSITKHAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGA 783
           +  + +S+  I   AEKIA +VKAAN+  VESYW +LFAKL EKRN+ DLIL+VG+GGGA
Sbjct: 10  YAALILSDDGIAITAEKIATIVKAANIK-VESYWPALFAKLLEKRNVEDLILSVGSGGGA 69

Query: 784 S-VAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 828
           + VAAA P    AGGAAAAAAP  EEKKEE KEESDDDMGFSLFD
Sbjct: 70  APVAAAAP----AGGAAAAAAPAVEEKKEEAKEESDDDMGFSLFD 109

[Close]

BLAST of Clc05G00340 vs. ExPASy Swiss-Prot
Match: O23095 (60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 SV=2)

HSP 1 Score: 101.3 bits (251), Expect = 5.4e-20
Identity = 61/105 (58.10%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 723 TFCVISVSNRSITKHAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGG 782
           ++ V+ + +  I   ++KIA LVKAA V+ +ESYW  LFAK+AEKRN+ DLI+NVGAGGG
Sbjct: 10  SYAVMILEDEGIAITSDKIATLVKAAGVE-IESYWPMLFAKMAEKRNVTDLIMNVGAGGG 69

Query: 783 ASVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 828
              A    A  AA G AAAAAP  EEKK+EP EESD D+GF LFD
Sbjct: 70  GGGAPVSAAAPAAAGGAAAAAPAKEEKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of Clc05G00340 vs. ExPASy TrEMBL
Match: A0A1S3AUT2 (uncharacterized protein At5g08430-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483110 PE=4 SV=1)

HSP 1 Score: 700.7 bits (1807), Expect = 7.5e-198
Identity = 367/518 (70.85%), Postives = 411/518 (79.34%), Query Frame = 0


Query: 1   MEGREAKAEDWCFVCKDGGDLILCNHGLVSLVTLCFHGLPSYSPHDLILSL-CIAFSFSN 60
           ME R++KAEDWCFVCKDGGDLILCN+GL S   L    +P  S H ++  +    F FSN
Sbjct: 1   MEERDSKAEDWCFVCKDGGDLILCNNGLSSHSFL----MPRPSSHHILCMISSFLFLFSN 60

Query: 61  CSKVYHLECLGFDCQ------SSSQIEEHWSCDCHSCSSCEGASEVHCFCCPASFCKNCI 120
           CSKVYHLECLG D        ++S I+E W+CDCH CSSC+ ASE HCFCCP SFC NCI
Sbjct: 61  CSKVYHLECLGLDSDYHCPTPTTSLIQEDWTCDCHHCSSCKEASEFHCFCCPTSFCNNCI 120

Query: 121 KSVKFIPLRPNKGLCADCWTLVRLAEKLSFSKKAVDFEDRDTHECLFKEYWDIVKEEEGL 180
           +SVKFI LRP+KGLC+DCWTLVRLAEKLSFSKKAVDFEDRDTHECLFKEYWDIVK+EEG+
Sbjct: 121 ESVKFIHLRPSKGLCSDCWTLVRLAEKLSFSKKAVDFEDRDTHECLFKEYWDIVKQEEGI 180

Query: 181 SRGDLVAVEEASSSNKGIRQIMKRTTPKPTPTPAAETL-------------------QDR 240
           SR DLVAVE+  SSNK  R  MK   P PTPTP  + L                    + 
Sbjct: 181 SRHDLVAVEQTRSSNKA-RSRMKGFIPTPTPTPTPKRLPNTLQHEHTNSKSKSKSKPNNN 240

Query: 241 DAKKFVGWGSKPLIEFLNSFGVDSTKQLSPCEVSSIILKYVEENDLIHPINKKKVICDGP 300
           +  KF+GWGSKPLIEFL SFGVDSTKQLSP EVSSIILKYV++NDLIHPIN KKVICD  
Sbjct: 241 NTHKFLGWGSKPLIEFLTSFGVDSTKQLSPSEVSSIILKYVQQNDLIHPINNKKVICDRL 300

Query: 301 LHLIFKKNTVPMKHINLLLGPHLFHPNNANNRNNGIGNKRSCLKPDQPQLNGDVALNLNK 360
           LHLIFKKNT+ MKHI+LLLGPH FH    NN N+GIG+ RS  +PDQPQ+NGD A  LNK
Sbjct: 301 LHLIFKKNTISMKHIDLLLGPHFFHD---NNENHGIGDNRSRSEPDQPQINGDTA--LNK 360

Query: 361 HHKTLSCSDQDKPTFASVVPHNINLVYLRRSLVEDLLRQQPETFEDMVVGSFVKVVDTNS 420
           H+KT +CS QDKPTFASVVPHNINLVYLRRSLVEDLL+ QPE+FED VVGSFVK++DTNS
Sbjct: 361 HYKTSNCS-QDKPTFASVVPHNINLVYLRRSLVEDLLK-QPESFEDKVVGSFVKIMDTNS 420

Query: 421 TQLHSKPKISQHLLQVTAVNKMSSADGRSVVLHVWRLPNIQISMLSDSDLTEEDCQDLKE 480
           +QL SK +ISQ LLQVTAV+KMSS DG+SVVLHVWRLPNI ISMLSDSDLTEEDC+DLKE
Sbjct: 421 SQLQSKGRISQRLLQVTAVSKMSSRDGKSVVLHVWRLPNIPISMLSDSDLTEEDCRDLKE 480

Query: 481 KMAKGLLQRPTVEEIEKKARILHQDIRKNSKDKVLFSV 493
           KM KGLLQRPTVEEIE KARILHQDIRKN  +K L ++
Sbjct: 481 KMEKGLLQRPTVEEIENKARILHQDIRKNWMEKELVNL 506

[Close]

BLAST of Clc05G00340 vs. ExPASy TrEMBL
Match: A0A1S3AVE1 (uncharacterized protein At5g08430-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483110 PE=4 SV=1)

HSP 1 Score: 682.9 bits (1761), Expect = 1.6e-192
Identity = 358/517 (69.25%), Postives = 398/517 (76.98%), Query Frame = 0


Query: 1   MEGREAKAEDWCFVCKDGGDLILCNHGLVSLVTLCFHGLPSYSPHDLILSLCIAFSFSNC 60
           ME R++KAEDWCFVCKDGGDLILCN+G                               NC
Sbjct: 1   MEERDSKAEDWCFVCKDGGDLILCNNG-------------------------------NC 60

Query: 61  SKVYHLECLGFDCQ------SSSQIEEHWSCDCHSCSSCEGASEVHCFCCPASFCKNCIK 120
           SKVYHLECLG D        ++S I+E W+CDCH CSSC+ ASE HCFCCP SFC NCI+
Sbjct: 61  SKVYHLECLGLDSDYHCPTPTTSLIQEDWTCDCHHCSSCKEASEFHCFCCPTSFCNNCIE 120

Query: 121 SVKFIPLRPNKGLCADCWTLVRLAEKLSFSKKAVDFEDRDTHECLFKEYWDIVKEEEGLS 180
           SVKFI LRP+KGLC+DCWTLVRLAEKLSFSKKAVDFEDRDTHECLFKEYWDIVK+EEG+S
Sbjct: 121 SVKFIHLRPSKGLCSDCWTLVRLAEKLSFSKKAVDFEDRDTHECLFKEYWDIVKQEEGIS 180

Query: 181 RGDLVAVEEASSSNKGIRQIMKRTTPKPTPTPAAETL-------------------QDRD 240
           R DLVAVE+  SSNK  R  MK   P PTPTP  + L                    + +
Sbjct: 181 RHDLVAVEQTRSSNKA-RSRMKGFIPTPTPTPTPKRLPNTLQHEHTNSKSKSKSKPNNNN 240

Query: 241 AKKFVGWGSKPLIEFLNSFGVDSTKQLSPCEVSSIILKYVEENDLIHPINKKKVICDGPL 300
             KF+GWGSKPLIEFL SFGVDSTKQLSP EVSSIILKYV++NDLIHPIN KKVICD  L
Sbjct: 241 THKFLGWGSKPLIEFLTSFGVDSTKQLSPSEVSSIILKYVQQNDLIHPINNKKVICDRLL 300

Query: 301 HLIFKKNTVPMKHINLLLGPHLFHPNNANNRNNGIGNKRSCLKPDQPQLNGDVALNLNKH 360
           HLIFKKNT+ MKHI+LLLGPH FH    NN N+GIG+ RS  +PDQPQ+NGD A  LNKH
Sbjct: 301 HLIFKKNTISMKHIDLLLGPHFFHD---NNENHGIGDNRSRSEPDQPQINGDTA--LNKH 360

Query: 361 HKTLSCSDQDKPTFASVVPHNINLVYLRRSLVEDLLRQQPETFEDMVVGSFVKVVDTNST 420
           +KT +CS QDKPTFASVVPHNINLVYLRRSLVEDLL+ QPE+FED VVGSFVK++DTNS+
Sbjct: 361 YKTSNCS-QDKPTFASVVPHNINLVYLRRSLVEDLLK-QPESFEDKVVGSFVKIMDTNSS 420

Query: 421 QLHSKPKISQHLLQVTAVNKMSSADGRSVVLHVWRLPNIQISMLSDSDLTEEDCQDLKEK 480
           QL SK +ISQ LLQVTAV+KMSS DG+SVVLHVWRLPNI ISMLSDSDLTEEDC+DLKEK
Sbjct: 421 QLQSKGRISQRLLQVTAVSKMSSRDGKSVVLHVWRLPNIPISMLSDSDLTEEDCRDLKEK 478

Query: 481 MAKGLLQRPTVEEIEKKARILHQDIRKNSKDKVLFSV 493
           M KGLLQRPTVEEIE KARILHQDIRKN  +K L ++
Sbjct: 481 MEKGLLQRPTVEEIENKARILHQDIRKNWMEKELVNL 478

[Close]

BLAST of Clc05G00340 vs. ExPASy TrEMBL
Match: A0A6J1ISQ4 (zinc finger CCCH domain-containing protein 44-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111479607 PE=4 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 8.6e-170
Identity = 325/493 (65.92%), Postives = 370/493 (75.05%), Query Frame = 0


Query: 1   MEGREAKAEDWCFVCKDGGDLILCNHGLVSLVTLCFHGLPSYSPHDLILSLCIAFSFSNC 60
           ME RE KAEDWCFVCKDGGDL+LC++                                NC
Sbjct: 1   MEEREGKAEDWCFVCKDGGDLLLCDN-------------------------------RNC 60

Query: 61  SKVYHLECLGFDCQSSSQIEEHWSCDCHSCSSCEGASEVHCFCCPASFCKNCIKSVKFIP 120
           SKVYHLEC+G+D +++SQIE+ W+C+CHSCSSC+GASEVHCFCCP SFCKNCIKSVKF+ 
Sbjct: 61  SKVYHLECVGYDRETTSQIEDDWTCECHSCSSCKGASEVHCFCCPTSFCKNCIKSVKFVH 120

Query: 121 LRPNKGLCADCWTLVRLAEKLSFSK-KAVDFEDRDTHECLFKEYWDIVKEEEGLSRGDLV 180
           LR NKGLC DCWTLVRLAE+LS S+ K+VDFEDRDTHECLFKEYW+IVK+EEGL RGDLV
Sbjct: 121 LRANKGLCTDCWTLVRLAEQLSVSEYKSVDFEDRDTHECLFKEYWEIVKKEEGLRRGDLV 180

Query: 181 AVEEASSSNKGIRQIMKRTTPKPTPTPAAETLQDRDAKK-----FVGWGSKPLIEFLNSF 240
           AVEE  SS KG R+ M+ T    TPT   +TLQDRD K         WGSKPLIEFL S 
Sbjct: 181 AVEEPYSS-KG-RRHMRGT----TPTRVVKTLQDRDTKSNTFKLITSWGSKPLIEFLTSI 240

Query: 241 GVDSTKQLSPCEVSSIILKYVEENDLIHPINKKKVICDGPLHLIFKKNTVPMKHINLLLG 300
           GVD T QLS C+VSSIILKYV+E DLIHPI K K+ICD  LHLIFKKNT+P+  IN LLG
Sbjct: 241 GVDITTQLSQCDVSSIILKYVQERDLIHPIKKMKIICDRNLHLIFKKNTIPLNQINALLG 300

Query: 301 PHLFHPNNANNRNNGIGNKRSCLKPDQPQLNGDVALNLNKHHKTLSCSDQ----DKPTFA 360
           PH  H N+    NN    K+ CL+ D PQ NGD      KH KTLSCS +    DK  FA
Sbjct: 301 PHFSHGNDTQRTNN---EKKRCLESD-PQ-NGDA-----KHQKTLSCSQEKSPNDKAYFA 360

Query: 361 SVVPHNINLVYLRRSLVEDLLRQQPETFEDMVVGSFVKVVDTNSTQLHSKPKISQHLLQV 420
           S+V HN+ LVYLR+SLVEDLL +QPE+FED VVGSFVKV++T S ++ SK KISQ LLQV
Sbjct: 361 SIVAHNMKLVYLRKSLVEDLL-EQPESFEDKVVGSFVKVMETESREIRSKGKISQQLLQV 420

Query: 421 TAVNKMSSADGRSVVLHVWRLPNIQISMLSDSDLTEEDCQDLKEKMAKGLLQRPTVEEIE 480
           TAV KMSS DG S+ L+VW LP+IQISMLSDSD+TEEDCQDL+EKMAKGL QRPTVEEIE
Sbjct: 421 TAVKKMSSTDGSSIGLNVWTLPDIQISMLSDSDITEEDCQDLREKMAKGLFQRPTVEEIE 445

Query: 481 KKARILHQDIRKN 484
           KKARILHQDIRK+
Sbjct: 481 KKARILHQDIRKD 445

[Close]

BLAST of Clc05G00340 vs. ExPASy TrEMBL
Match: A0A6J1IYF8 (zinc finger CCCH domain-containing protein 44-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479607 PE=4 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 8.6e-170
Identity = 325/493 (65.92%), Postives = 370/493 (75.05%), Query Frame = 0


Query: 1   MEGREAKAEDWCFVCKDGGDLILCNHGLVSLVTLCFHGLPSYSPHDLILSLCIAFSFSNC 60
           ME RE KAEDWCFVCKDGGDL+LC++                                NC
Sbjct: 1   MEEREGKAEDWCFVCKDGGDLLLCDN-------------------------------RNC 60

Query: 61  SKVYHLECLGFDCQSSSQIEEHWSCDCHSCSSCEGASEVHCFCCPASFCKNCIKSVKFIP 120
           SKVYHLEC+G+D +++SQIE+ W+C+CHSCSSC+GASEVHCFCCP SFCKNCIKSVKF+ 
Sbjct: 61  SKVYHLECVGYDRETTSQIEDDWTCECHSCSSCKGASEVHCFCCPTSFCKNCIKSVKFVH 120

Query: 121 LRPNKGLCADCWTLVRLAEKLSFSK-KAVDFEDRDTHECLFKEYWDIVKEEEGLSRGDLV 180
           LR NKGLC DCWTLVRLAE+LS S+ K+VDFEDRDTHECLFKEYW+IVK+EEGL RGDLV
Sbjct: 121 LRANKGLCTDCWTLVRLAEQLSVSEYKSVDFEDRDTHECLFKEYWEIVKKEEGLRRGDLV 180

Query: 181 AVEEASSSNKGIRQIMKRTTPKPTPTPAAETLQDRDAKK-----FVGWGSKPLIEFLNSF 240
           AVEE  SS KG R+ M+ T    TPT   +TLQDRD K         WGSKPLIEFL S 
Sbjct: 181 AVEEPYSS-KG-RRHMRGT----TPTRVVKTLQDRDTKSNTFKLITSWGSKPLIEFLTSI 240

Query: 241 GVDSTKQLSPCEVSSIILKYVEENDLIHPINKKKVICDGPLHLIFKKNTVPMKHINLLLG 300
           GVD T QLS C+VSSIILKYV+E DLIHPI K K+ICD  LHLIFKKNT+P+  IN LLG
Sbjct: 241 GVDITTQLSQCDVSSIILKYVQERDLIHPIKKMKIICDRNLHLIFKKNTIPLNQINALLG 300

Query: 301 PHLFHPNNANNRNNGIGNKRSCLKPDQPQLNGDVALNLNKHHKTLSCSDQ----DKPTFA 360
           PH  H N+    NN    K+ CL+ D PQ NGD      KH KTLSCS +    DK  FA
Sbjct: 301 PHFSHGNDTQRTNN---EKKRCLESD-PQ-NGDA-----KHQKTLSCSQEKSPNDKAYFA 360

Query: 361 SVVPHNINLVYLRRSLVEDLLRQQPETFEDMVVGSFVKVVDTNSTQLHSKPKISQHLLQV 420
           S+V HN+ LVYLR+SLVEDLL +QPE+FED VVGSFVKV++T S ++ SK KISQ LLQV
Sbjct: 361 SIVAHNMKLVYLRKSLVEDLL-EQPESFEDKVVGSFVKVMETESREIRSKGKISQQLLQV 420

Query: 421 TAVNKMSSADGRSVVLHVWRLPNIQISMLSDSDLTEEDCQDLKEKMAKGLLQRPTVEEIE 480
           TAV KMSS DG S+ L+VW LP+IQISMLSDSD+TEEDCQDL+EKMAKGL QRPTVEEIE
Sbjct: 421 TAVKKMSSTDGSSIGLNVWTLPDIQISMLSDSDITEEDCQDLREKMAKGLFQRPTVEEIE 445

Query: 481 KKARILHQDIRKN 484
           KKARILHQDIRK+
Sbjct: 481 KKARILHQDIRKD 445

[Close]

BLAST of Clc05G00340 vs. ExPASy TrEMBL
Match: A0A6J1IVC4 (zinc finger CCCH domain-containing protein 44-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479607 PE=4 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 8.6e-170
Identity = 325/493 (65.92%), Postives = 370/493 (75.05%), Query Frame = 0


Query: 1   MEGREAKAEDWCFVCKDGGDLILCNHGLVSLVTLCFHGLPSYSPHDLILSLCIAFSFSNC 60
           ME RE KAEDWCFVCKDGGDL+LC++                                NC
Sbjct: 1   MEEREGKAEDWCFVCKDGGDLLLCDN-------------------------------RNC 60

Query: 61  SKVYHLECLGFDCQSSSQIEEHWSCDCHSCSSCEGASEVHCFCCPASFCKNCIKSVKFIP 120
           SKVYHLEC+G+D +++SQIE+ W+C+CHSCSSC+GASEVHCFCCP SFCKNCIKSVKF+ 
Sbjct: 61  SKVYHLECVGYDRETTSQIEDDWTCECHSCSSCKGASEVHCFCCPTSFCKNCIKSVKFVH 120

Query: 121 LRPNKGLCADCWTLVRLAEKLSFSK-KAVDFEDRDTHECLFKEYWDIVKEEEGLSRGDLV 180
           LR NKGLC DCWTLVRLAE+LS S+ K+VDFEDRDTHECLFKEYW+IVK+EEGL RGDLV
Sbjct: 121 LRANKGLCTDCWTLVRLAEQLSVSEYKSVDFEDRDTHECLFKEYWEIVKKEEGLRRGDLV 180

Query: 181 AVEEASSSNKGIRQIMKRTTPKPTPTPAAETLQDRDAKK-----FVGWGSKPLIEFLNSF 240
           AVEE  SS KG R+ M+ T    TPT   +TLQDRD K         WGSKPLIEFL S 
Sbjct: 181 AVEEPYSS-KG-RRHMRGT----TPTRVVKTLQDRDTKSNTFKLITSWGSKPLIEFLTSI 240

Query: 241 GVDSTKQLSPCEVSSIILKYVEENDLIHPINKKKVICDGPLHLIFKKNTVPMKHINLLLG 300
           GVD T QLS C+VSSIILKYV+E DLIHPI K K+ICD  LHLIFKKNT+P+  IN LLG
Sbjct: 241 GVDITTQLSQCDVSSIILKYVQERDLIHPIKKMKIICDRNLHLIFKKNTIPLNQINALLG 300

Query: 301 PHLFHPNNANNRNNGIGNKRSCLKPDQPQLNGDVALNLNKHHKTLSCSDQ----DKPTFA 360
           PH  H N+    NN    K+ CL+ D PQ NGD      KH KTLSCS +    DK  FA
Sbjct: 301 PHFSHGNDTQRTNN---EKKRCLESD-PQ-NGDA-----KHQKTLSCSQEKSPNDKAYFA 360

Query: 361 SVVPHNINLVYLRRSLVEDLLRQQPETFEDMVVGSFVKVVDTNSTQLHSKPKISQHLLQV 420
           S+V HN+ LVYLR+SLVEDLL +QPE+FED VVGSFVKV++T S ++ SK KISQ LLQV
Sbjct: 361 SIVAHNMKLVYLRKSLVEDLL-EQPESFEDKVVGSFVKVMETESREIRSKGKISQQLLQV 420

Query: 421 TAVNKMSSADGRSVVLHVWRLPNIQISMLSDSDLTEEDCQDLKEKMAKGLLQRPTVEEIE 480
           TAV KMSS DG S+ L+VW LP+IQISMLSDSD+TEEDCQDL+EKMAKGL QRPTVEEIE
Sbjct: 421 TAVKKMSSTDGSSIGLNVWTLPDIQISMLSDSDITEEDCQDLREKMAKGLFQRPTVEEIE 445

Query: 481 KKARILHQDIRKN 484
           KKARILHQDIRK+
Sbjct: 481 KKARILHQDIRKD 445

[Close]

BLAST of Clc05G00340 vs. TAIR 10
Match: AT5G63700.1 (zinc ion binding;DNA binding )

HSP 1 Score: 237.7 bits (605), Expect = 3.4e-62
Identity = 177/554 (31.95%), Postives = 269/554 (48.56%), Query Frame = 0


Query: 2   EGREAKAEDWCFVCKDGGDLILCNHGLVSLVTLCFHGLPSYSPHDLILSLCIAFSFSNCS 61
           E  E + EDWCF+CKDGG+L+LC+                               F +C 
Sbjct: 15  EEDEKECEDWCFICKDGGNLMLCD-------------------------------FKDCP 74

Query: 62  KVYHLECLGFDCQSSSQIEEHWSCDCHSCSSCEGASEVHCFCCPASFCKNCIKSVKFIPL 121
           KVYH  C+  D  S+S+  + + C  HSC  C+   ++ C CC  + C+ C+   +FI L
Sbjct: 75  KVYHESCVEKD-SSASKNGDSYICMWHSCYLCKKTPKLCCLCCSHAVCEGCVTHAEFIQL 134

Query: 122 RPNKGLCADCWTLVRLAEKLSFSKKA---VDFEDRDTHECLFKEYWDIVKEEEGL----- 181
           + +KGLC  C   V   E++     A   +D  DR+T ECLF EYW+I K++EGL     
Sbjct: 135 KGDKGLCNQCQEYVFALEEIQEYDAAGDKLDLTDRNTFECLFLEYWEIAKKQEGLTFDDV 194

Query: 182 -----------------------SRGDL-------------------VAVEEASSSNKGI 241
                                  S GD+                    A+ +A +S  G 
Sbjct: 195 RKVCASKPQKKGVKSKYKDDPKFSLGDVHTSKSQKKGDKLKNKDDPKFALGDAHTSKSGK 254

Query: 242 RQIMKRTTPKPTPTPAAETLQDR-DAKK--------FVGWGSKPLIEFLNSFGVDSTKQL 301
           + +  +    P    +   ++D  D KK        F+ WGSKPLI+FL S G D+ + +
Sbjct: 255 KGVKLKNKDDPKFLVSDHAVEDAVDYKKVGKNKRMEFIRWGSKPLIDFLTSIGEDTREAM 314

Query: 302 SPCEVSSIILKYVEENDLIHPINKKKVICDGPLHLIFKKNTVPMKHINLLLGPHLFHPNN 361
           S   V S+I +Y+ E +L+    KKKV CD  L+ IF+K ++  K I  LL  HL    N
Sbjct: 315 SQHSVESVIRRYIREKNLLDREKKKKVHCDEKLYSIFRKKSINQKRIYTLLNTHL--KEN 374

Query: 362 ANNRNNGIGNKRSCLKPDQPQLN--GDVALNLNKHHKTLS-----CSDQDKPT-----FA 421
            +        +   ++ ++ + +   D  +   K  KT S     C  + +P      FA
Sbjct: 375 LDQVEYFTPLELGFIEKNEKRFSEKNDKVMMPCKKQKTESSDDEICEKEVQPEMRATGFA 434

Query: 422 SVVPHNINLVYLRRSLVEDLLRQQPETFEDMVVGSFVKVVDTNSTQLHSKPKISQHLLQV 481
           ++   N+ LVYLR+SLV +LL+Q  ++F D VVGSFVKV +        +  ++  +LQV
Sbjct: 435 TINADNLKLVYLRKSLVLELLKQN-DSFVDKVVGSFVKVKN------GPRDFMAYQILQV 494

Query: 482 TAVNKMSSADGRSVVLHVWRLPN-IQISMLSDSDLTEEDCQDLKEKMAKGLLQRPTVEEI 484
           T + K +      V+LHV  + + + IS L DSD+ EE+ +DLK+K+  GLL++ TV E+
Sbjct: 495 TGI-KNADDQSEGVLLHVSGMASGVSISKLDDSDIREEEIKDLKQKVMNGLLRQTTVVEM 526

[Close]

BLAST of Clc05G00340 vs. TAIR 10
Match: AT2G16485.1 (nucleic acid binding;zinc ion binding;DNA binding )

HSP 1 Score: 179.1 bits (453), Expect = 1.5e-44
Identity = 153/528 (28.98%), Postives = 234/528 (44.32%), Query Frame = 0


Query: 7    KAEDWCFVCKDGGDLILCNHGLVSLVTLCFHGLPSYSPHDLILSLCIAFSFSNCSKVYHL 66
            K ED CF+C DGGDL+LC+                                  C+K YH 
Sbjct: 597  KEEDVCFMCFDGGDLVLCDR-------------------------------RGCTKAYHP 656

Query: 67   ECLGFDCQSSSQIEEHWSCDCHSCSSCEGASEVHCFCCPASFCKNCIKSVKFIPLRPNKG 126
             C+  D ++  Q +  W+C  H CS CE  +   C+ C  S CK C K   F  +R NKG
Sbjct: 657  SCVDRD-EAFFQTKGKWNCGWHLCSKCEKTATYLCYTCMFSLCKGCAKDAVFFCIRGNKG 716

Query: 127  LCADCWTLVRLAEKLSFSKK--AVDFEDRDTHECLFKEYWDIVKEEEGLSRGDL------ 186
            LC  C   V+L E+    K+   +DF D+ + E LFK+YW  +K +  LS  +L      
Sbjct: 717  LCETCMETVKLIERKQQEKEPAQLDFNDKTSWEYLFKDYWIDLKTQLSLSPEELDQAKRP 776

Query: 187  VAVEEASSSNKGI---------------RQIMKRTTPKPTPTPAAETLQDRDAKKF---- 246
            +   E ++S +G                    KR T   + + +AE +     K      
Sbjct: 777  LKGHETNASKQGTASETDYVTDGGSDSDSSPKKRKTRSRSKSGSAEKILSSGDKNLSDET 836

Query: 247  VGWGSKPLIEFLNSFGVDSTKQLSPCEVSSIILKYVEENDLIHPINKKKVICDGPLHLIF 306
            + W SK L++ +          L   EV +++L Y++  +L  P  K +VICD  L  +F
Sbjct: 837  MEWASKELLDLVVHMRRGDRSFLPMLEVQTLLLAYIKRYNLRDPRRKSQVICDSRLQNLF 896

Query: 307  KKNTVPMKHINLLLGPHLFHPNNANNRNNGIGNKRSCLKPDQPQLNGDVALNLNKHHKTL 366
             K+ V    +  LL  H F     N  ++  G+     +P+       V ++ N  H   
Sbjct: 897  GKSHVGHFEMLNLLDSH-FLKKEQNQADDIQGDIVDTEEPNH------VDVDENLDHPVK 956

Query: 367  SCSDQDKPT---------------FASVVPHNINLVYLRRSLVEDLLRQQPETFEDMVVG 426
            S  D+ + T               FA+V  HNINL+YLRRSLVEDLL +    FE+ V  
Sbjct: 957  SGKDKKRKTRKKNVRKGRQSNLDDFAAVDMHNINLIYLRRSLVEDLL-EDSTAFEEKVAS 1016

Query: 427  SFVKV-VDTNSTQLHSKPKISQHLLQVTAVNK--------MSSADGRSVVLHVWRLPNIQ 484
            +FV++ +  N  Q          L+QV   +K          + D    +L++ +   I 
Sbjct: 1017 AFVRLRISGNQKQ------DLYRLVQVVGTSKAPEPYKVGKKTTDYVLEILNLDKTEVIS 1076

[Close]

BLAST of Clc05G00340 vs. TAIR 10
Match: AT3G51120.1 (DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding )

HSP 1 Score: 171.8 bits (434), Expect = 2.3e-42
Identity = 142/515 (27.57%), Postives = 225/515 (43.69%), Query Frame = 0


Query: 4   REAKAEDWCFVCKDGGDLILCNHGLVSLVTLCFHGLPSYSPHDLILSLCIAFSFSNCSKV 63
           +E K ED CF+C DGGDL+LC+                                 NC K 
Sbjct: 105 KEDKEEDVCFICFDGGDLVLCDR-------------------------------RNCPKA 164

Query: 64  YHLECLGFDCQSSSQIEEHWSCDCHSCSSCEGASEVHCFCCPASFCKNCIKSVKFIPLRP 123
           YH  C+  D ++  +    W+C  H C +C+ AS   C+ C  S CK CIK   ++ +R 
Sbjct: 165 YHPACIKRD-EAFFRTTAKWNCGWHICGTCQKASSYMCYTCTFSVCKRCIKDADYVIVRG 224

Query: 124 NKGLCADCWTLVRLAEKLSFSKK---AVDFEDRDTHECLFKEYWDIVKEEEGLSRGDLVA 183
           N GLC  C   + L E ++        VDF+D+ + E LFK YW  +KEE  L+  +L  
Sbjct: 225 NMGLCGTCIKPIMLIENIAQGDNEAVKVDFDDKLSWEYLFKVYWLCLKEELSLTVDELTR 284

Query: 184 VE-------------EASSSNKGIRQI--------MKRTTPKPT-PTPAAETLQDRDAKK 243
                          E+ + +   R +         +RT+  PT P            KK
Sbjct: 285 ANNPWKEVPNTAPKVESQNDHTNNRALDVAVNGTKRRRTSDSPTLPNKLDGKNPSNILKK 344

Query: 244 FVG---WGSKPLIEFLNSFGVDSTKQLSPCEVSSIILKYVEENDLIHPINKKKVICDGPL 303
             G   W +K L+EF++      T  LS  +V  ++L Y+++ +L  P+ K +V+CD  L
Sbjct: 345 APGDTSWATKELLEFVSFMKNGDTSVLSQFDVQGLLLDYIKKKNLRDPLQKSQVLCDQML 404

Query: 304 HLIFKKNTVPMKHINLLLGPHLFHPNNANNRNNGIGNKRSCLKPDQPQLNGDVALNLNKH 363
             +F K  V    +  LL  H+             G     +     + +    +  ++ 
Sbjct: 405 VKLFGKQRVGHFEMLKLLESHVLIQEKPKGAKTTNGETTHAVPSQIEEDSVHDPMVRDRR 464

Query: 364 HKTLSCSD-----QDKPTFASVVPHNINLVYLRRSLVEDLLRQQPETFEDMVVGSFVKVV 423
            K    +D     ++   +A++  HNINL+YLRR  +E LL       ++ VVG+ +++ 
Sbjct: 465 RKMRRKTDGRVQNENLDAYAAIDVHNINLIYLRRKFLESLL-DDINKVDEKVVGTILRIK 524

Query: 424 DTNSTQLHSKPKISQH-LLQVTAVNK-----MSSADGRSVVLHVWRLPN---IQISMLSD 477
            + S Q     K+  H L+QV   +K        A    V+L +  L     I I  LSD
Sbjct: 525 VSGSDQ-----KLDIHRLVQVVGTSKAIASYQLGAKTTDVMLEILNLDKREVISIDQLSD 581

[Close]

BLAST of Clc05G00340 vs. TAIR 10
Match: AT5G08430.1 (SWIB/MDM2 domain;Plus-3;GYF )

HSP 1 Score: 161.8 bits (408), Expect = 2.4e-39
Identity = 107/309 (34.63%), Postives = 171/309 (55.34%), Query Frame = 0


Query: 176 GDLVAVEEASSSNKGIRQIMKRTTPKPTPTPAAETLQDRDAKKFVGWGSKPLIEFLNSFG 235
           GD+  VEE + S    R+  ++  PK                +FVGWGS+ LIEFL+S G
Sbjct: 2   GDITWVEEGNGSATSSRK--RKARPK--------------RFEFVGWGSRQLIEFLHSLG 61

Query: 236 VDSTKQLSPCEVSSIILKYVEENDLIHPINKKKVICDGPLHLIFKKNTVPMKHINLLLGP 295
            D+++ +S  +VS  I KY+ +  L+ P NKKKV+CD  L L+F   T+    +  LL  
Sbjct: 62  KDTSEMISRYDVSDTIAKYISKEGLLDPSNKKKVVCDKRLVLLFGTRTIFRMKVYDLLEK 121

Query: 296 HLFHPNNANNRNNGIGNKRSCLKPDQPQLNGDVALNLNKHHKTLSCSDQDKPTFASVVPH 355
           H         + N   +    L  D+PQ+   +  +     +T     + + TFA++V  
Sbjct: 122 HY--------KENQDDSDFDFLYEDEPQI---ICHSEKIAKRTSKVVKKPRGTFAAIVSD 181

Query: 356 NINLVYLRRSLVEDLLRQQPETFEDMVVGSFVKVVDTNSTQLHSKPKISQHLLQVTAVNK 415
           NI L+YLR+SLV++LL+  P+TFE  ++GSFV++    +  L   P     L+QVT V K
Sbjct: 182 NIKLLYLRKSLVQELLK-SPDTFEGKMLGSFVRIKSDPNDYLQKYP---YQLVQVTGVKK 241

Query: 416 MSSADGRSVVLHVWR-LPNIQISMLSDSDLTEEDCQDLKEKMAKGLLQRPTVEEIEKKAR 475
               D    +L V   + ++ IS+LSD + ++E+C+DL +++  GLL++PT+ E+E+KA+
Sbjct: 242 EHGTD--DFLLQVTNYVKDVSISVLSDDNFSQEECEDLHQRIKNGLLKKPTIVEMEEKAK 277

Query: 476 ILHQDIRKN 484
            LH+D  K+
Sbjct: 302 KLHKDQTKH 277

[Close]

BLAST of Clc05G00340 vs. TAIR 10
Match: AT5G23480.1 (SWIB/MDM2 domain;Plus-3;GYF )

HSP 1 Score: 130.6 bits (327), Expect = 5.9e-30
Identity = 88/268 (32.84%), Postives = 141/268 (52.61%), Query Frame = 0


Query: 218 KFVGWGSKPLIEFLNSFGVDSTKQLSPCEVSSIILKYVEENDLIHPINKKK----VICDG 277
           +FVGWGS+ LIEFL S G D+T ++S  +V++II+ Y+ E     P+  KK    V CD 
Sbjct: 23  EFVGWGSRNLIEFLESLGRDTTNKISENDVTAIIMNYIREKSRETPLKSKKRRKTVACDE 82

Query: 278 PLHLIFKKNTVPMKHINLLLGPHLFHPNNANNRNNGIGNKRSCLKPDQPQLNGDVALNLN 337
            L L+F         IN++  P L   +   N+   +         D  Q    ++L+  
Sbjct: 83  KLRLLFGAG-----KINVIKVPDLVEKHYVENQEEDLFYDDLYASEDDKQQR--LSLSDK 142

Query: 338 KHHKTLSCSDQDKPTFASVVPHNINLVYLRRSLVEDLLRQQPETFEDMVVGSFVKVVDTN 397
              +T     + + TFA++V   + L+YLR+SLV++L +  PETFE  VV +FV++    
Sbjct: 143 VAKQTKQVVSKPRGTFAAIVRDTVKLLYLRKSLVQELAK-TPETFESKVVRTFVRI---- 202

Query: 398 STQLHSKPKISQHLLQVTAVNKMSSADGR--SVVLHVWRLPNIQISMLSDSDLTEEDCQD 457
                   K    L+ VT V +    DG    V  + + L ++  S LSD D ++E+C++
Sbjct: 203 --------KNPCQLVHVTGVKEGDPIDGNLFQVTNYSYYLKDVTTSSLSDDDFSQEECEE 262

Query: 458 LKEKMAKGLLQRPTVEEIEKKARILHQD 480
           L +++  G  +R TV ++E+KAR LH+D
Sbjct: 263 LHQRINNGFAKRLTVVDMEEKARSLHED 270

The following BLAST results are available for this feature:

BLAST of Clc05G00340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437776.1	1.5e-197	70.85	PREDICTED: uncharacterized protein At5g08430-like isoform X1 [Cucumis melo]	[more]
XP_038902032.1	2.2e-196	74.85	zinc finger CCCH domain-containing protein 44-like isoform X1 [Benincasa hispida...	[more]
XP_031737764.1	1.1e-192	69.86	zinc finger CCCH domain-containing protein 19 [Cucumis sativus]	[more]
XP_008437778.1	3.3e-192	69.25	PREDICTED: uncharacterized protein At5g08430-like isoform X2 [Cucumis melo]	[more]
XP_038902039.1	1.4e-190	68.40	zinc finger CCCH domain-containing protein 44-like isoform X2 [Benincasa hispida...	[more]

BLAST of Clc05G00340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIV5	2.0e-43	28.98	Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9SD34	3.3e-41	27.57	Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9FT92	3.4e-38	34.63	Uncharacterized protein At5g08430 OS=Arabidopsis thaliana OX=3702 GN=At5g08430 P...	[more]
P52855	5.2e-23	67.62	60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1	[more]
O23095	5.4e-20	58.10	60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 ...	[more]

BLAST of Clc05G00340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AUT2	7.5e-198	70.85	uncharacterized protein At5g08430-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A1S3AVE1	1.6e-192	69.25	uncharacterized protein At5g08430-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1ISQ4	8.6e-170	65.92	zinc finger CCCH domain-containing protein 44-like isoform X3 OS=Cucurbita maxim...	[more]
A0A6J1IYF8	8.6e-170	65.92	zinc finger CCCH domain-containing protein 44-like isoform X1 OS=Cucurbita maxim...	[more]
A0A6J1IVC4	8.6e-170	65.92	zinc finger CCCH domain-containing protein 44-like isoform X2 OS=Cucurbita maxim...	[more]

BLAST of Clc05G00340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63700.1	3.4e-62	31.95	zinc ion binding;DNA binding	[more]
AT2G16485.1	1.5e-44	28.98	nucleic acid binding;zinc ion binding;DNA binding	[more]
AT3G51120.1	2.3e-42	27.57	DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding	[more]
AT5G08430.1	2.4e-39	34.63	SWIB/MDM2 domain;Plus-3;GYF	[more]
AT5G23480.1	5.9e-30	32.84	SWIB/MDM2 domain;Plus-3;GYF	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004343	Plus-3 domain	SMART	SM00719	rtf1	coord: 351..458 e-value: 1.4E-15 score: 67.7
IPR004343	Plus-3 domain	PFAM	PF03126	Plus-3	coord: 356..456 e-value: 2.2E-8 score: 34.6
IPR004343	Plus-3 domain	PROSITE	PS51360	PLUS3	coord: 351..481 score: 20.53376
IPR036885	SWIB/MDM2 domain superfamily	GENE3D	1.10.245.10	SWIB/MDM2 domain	coord: 210..307 e-value: 6.6E-24 score: 85.6
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	47592	SWIB/MDM2 domain	coord: 218..302
None	No IPR available	PFAM	PF00428	Ribosomal_60s	coord: 738..826 e-value: 2.8E-21 score: 75.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 796..827
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 805..821
None	No IPR available	PANTHER	PTHR46851	OS01G0884500 PROTEIN	coord: 4..28
None	No IPR available	PANTHER	PTHR46851	OS01G0884500 PROTEIN	coord: 56..489
None	No IPR available	PANTHER	PTHR46851:SF5	ZINC ION BINDING / DNA BINDING PROTEIN	coord: 56..489 coord: 4..28
None	No IPR available	CDD	cd10567	SWIB-MDM2_like	coord: 222..297 e-value: 9.14226E-14 score: 64.8721
IPR038716	Ribosomal protein P1/P2, N-terminal domain	GENE3D	1.10.10.1410		coord: 720..778 e-value: 2.5E-15 score: 58.0
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 2..133 e-value: 1.0E-15 score: 59.7
IPR036128	Plus3-like superfamily	GENE3D	3.90.70.200		coord: 353..478 e-value: 1.0E-19 score: 72.7
IPR036128	Plus3-like superfamily	SUPERFAMILY	159042	Plus3-like	coord: 353..478
IPR003121	SWIB/MDM2 domain	PFAM	PF02201	SWIB	coord: 224..297 e-value: 1.8E-11 score: 43.7
IPR003121	SWIB/MDM2 domain	PROSITE	PS51925	SWIB_MDM2	coord: 216..299 score: 13.68711
IPR027534	Ribosomal protein L12/P1/P2 family	HAMAP	MF_01478	Ribosomal_L12_arch	coord: 721..827 score: 12.161175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G00340.2	Clc05G00340.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006414	translational elongation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003735	structural constituent of ribosome