Clc05G00170 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G00170
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	ethylene-responsive transcription factor 13-like
Location	ClcChr05: 129943 .. 130851 (-)
RNA-Seq Expression	Clc05G00170
Synteny	Clc05G00170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGACAGAAATGGATTGAAAAAGAAGGGGGAATTGGAATTGGCATTATGATATGATATTATTTTGTACACGCGTTTTTGTTTAAATGAAGATGGTATTTGGAGATTTTTTTTTTTTCAAGGAGGTTGGTTCAGGGAAGCAGCGAGATTTGAGATGTACATATAAAATGAAGGAGAAGGGAGATGAGGGGGCAAAGCCACTGGAAGACTAACAGAAATTAGATATAATAACTATAATGTCGTCGTGGAGGGAGTCGGATGTGTTGGAGTCGATCCGTCAACATCTTCTGGAAGAAAATAACAGTGGGAGTGGGAGTGGGAATGGGGATGGCCGGGAATCAAGTGCAATTATTATTCAGCATCATAAGAAGGAGGCGGCGAAGAATGAAGTGCAACTACTGCAATTCAAGGGAGTGAGGCGGAGGCCATGGGGGAAATACGCGGCGGAGATCAGAGATCCAAAGAGAAACGGAGCCAGAACATGGCTGGGGACGTTTGACACCGCCCAAGACGCAGCTCTGGCCTACGATCGAGCGGCTTTCAAAATCCGAGGAGCTAAGGCAAAGCTCAACTTTCCGCATCTCATTGATTCTGATTCTATTTGGTCCACTTCTACTTCCACTTCTGCTTCTACTTCCACTTCCACTTCTGCTTCTACTAAGCGTCCTCCGAGTCCAACCCACGCCCAGCATCGAACTTCTGCTTCAAAACGCCGCTGACATTAATTGAACACCCGATAGCGCCCCTACGCAACGCAACTTTGATTCAGTGTCATTACTGTCTTGTTTTTCACATTCTCCTACTTGCTTGCTTTCTCACTCCGGATGGGTGGGGGGGGGAGGGGGGAGTGTTCCTCTAGGCCGCTGCCTGCGGAGCGACAATCCCATTCCGTCTCCTCTCTCACATTTTCA

mRNA sequence

AGGACAGAAATGGATTGAAAAAGAAGGGGGAATTGGAATTGGCATTATGATATGATATTATTTTGTACACGCGTTTTTGTTTAAATGAAGATGGTATTTGGAGATTTTTTTTTTTTCAAGGAGGTTGGTTCAGGGAAGCAGCGAGATTTGAGATGTACATATAAAATGAAGGAGAAGGGAGATGAGGGGGCAAAGCCACTGGAAGACTAACAGAAATTAGATATAATAACTATAATGTCGTCGTGGAGGGAGTCGGATGTGTTGGAGTCGATCCGTCAACATCTTCTGGAAGAAAATAACAGTGGGAGTGGGAGTGGGAATGGGGATGGCCGGGAATCAAGTGCAATTATTATTCAGCATCATAAGAAGGAGGCGGCGAAGAATGAAGTGCAACTACTGCAATTCAAGGGAGTGAGGCGGAGGCCATGGGGGAAATACGCGGCGGAGATCAGAGATCCAAAGAGAAACGGAGCCAGAACATGGCTGGGGACGTTTGACACCGCCCAAGACGCAGCTCTGGCCTACGATCGAGCGGCTTTCAAAATCCGAGGAGCTAAGGCAAAGCTCAACTTTCCGCATCTCATTGATTCTGATTCTATTTGGTCCACTTCTACTTCCACTTCTGCTTCTACTTCCACTTCCACTTCTGCTTCTACTAAGCGTCCTCCGAGTCCAACCCACGCCCAGCATCGAACTTCTGCTTCAAAACGCCGCTGACATTAATTGAACACCCGATAGCGCCCCTACGCAACGCAACTTTGATTCAGTGTCATTACTGTCTTGTTTTTCACATTCTCCTACTTGCTTGCTTTCTCACTCCGGATGGGTGGGGGGGGGAGGGGGGAGTGTTCCTCTAGGCCGCTGCCTGCGGAGCGACAATCCCATTCCGTCTCCTCTCTCACATTTTCA

Coding sequence (CDS)

ATGTCGTCGTGGAGGGAGTCGGATGTGTTGGAGTCGATCCGTCAACATCTTCTGGAAGAAAATAACAGTGGGAGTGGGAGTGGGAATGGGGATGGCCGGGAATCAAGTGCAATTATTATTCAGCATCATAAGAAGGAGGCGGCGAAGAATGAAGTGCAACTACTGCAATTCAAGGGAGTGAGGCGGAGGCCATGGGGGAAATACGCGGCGGAGATCAGAGATCCAAAGAGAAACGGAGCCAGAACATGGCTGGGGACGTTTGACACCGCCCAAGACGCAGCTCTGGCCTACGATCGAGCGGCTTTCAAAATCCGAGGAGCTAAGGCAAAGCTCAACTTTCCGCATCTCATTGATTCTGATTCTATTTGGTCCACTTCTACTTCCACTTCTGCTTCTACTTCCACTTCCACTTCTGCTTCTACTAAGCGTCCTCCGAGTCCAACCCACGCCCAGCATCGAACTTCTGCTTCAAAACGCCGCTGA

Protein sequence

MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRTSASKRR

Homology

[Close]

BLAST of Clc05G00170 vs. NCBI nr
Match: XP_038907088.1 (ethylene-responsive transcription factor 13-like [Benincasa hispida])

HSP 1 Score: 244.2 bits (622), Expect = 7.6e-61
Identity = 134/166 (80.72%), Postives = 139/166 (83.73%), Query Frame = 0


Query: 1   MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRE-SSAIIIQHHKK-----EAAKNEVQL 60
           MSSWRESDVLESIRQHLLEENNSG G G+GDGRE SSAI I HH K      AA+N VQL
Sbjct: 1   MSSWRESDVLESIRQHLLEENNSGGGDGDGDGRESSSAISIHHHHKAAAVAAAAENGVQL 60

Query: 61  LQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFP 120
           +QFKGVRRRPWGKYA EIRDPKRNGARTWLGTFDTAQDAALAYDRAAF+IRGAKAKLNFP
Sbjct: 61  MQFKGVRRRPWGKYAGEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFRIRGAKAKLNFP 120

Query: 121 HLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRTSASKRR 161
           HLIDSDSIWSTST            STKRP SPTHAQH+TSASKRR
Sbjct: 121 HLIDSDSIWSTST------------STKRPRSPTHAQHQTSASKRR 154

[Close]

BLAST of Clc05G00170 vs. NCBI nr
Match: XP_008439349.1 (PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis melo] >KAA0048803.1 ethylene-responsive transcription factor 13-like [Cucumis melo var. makuwa] >TYK20755.1 ethylene-responsive transcription factor 13-like [Cucumis melo var. makuwa])

HSP 1 Score: 202.2 bits (513), Expect = 3.3e-48
Identity = 114/152 (75.00%), Postives = 122/152 (80.26%), Query Frame = 0


Query: 1   MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGV 60
           MSSWRESDVLESIRQHLL+EN + SG G+GDG  S  II  HH K AA     + +FKGV
Sbjct: 1   MSSWRESDVLESIRQHLLKENLNKSGDGDGDGIFS--IIQDHHYKAAA-----VEKFKGV 60

Query: 61  RRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSD 120
           RRRPWGKYAAEIRDPKRNGARTWLGTF+TAQ+AALAYDRAAFKIRGAKAKLNFPHLIDS 
Sbjct: 61  RRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSA 120

Query: 121 SIWSTSTSTSASTSTSTSASTKRPPSPTHAQH 153
           S +STS STS         STKRPPSPTHA H
Sbjct: 121 STYSTSASTS---------STKRPPSPTHADH 136

[Close]

BLAST of Clc05G00170 vs. NCBI nr
Match: XP_004134276.1 (ethylene-responsive transcription factor 13 [Cucumis sativus] >KGN56335.1 hypothetical protein Csa_010864 [Cucumis sativus])

HSP 1 Score: 192.6 bits (488), Expect = 2.6e-45
Identity = 111/156 (71.15%), Postives = 118/156 (75.64%), Query Frame = 0


Query: 1   MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGV 60
           MSSWRESDVL+SIRQHLLEEN + SG G        +II  HH K AA      +QFKGV
Sbjct: 1   MSSWRESDVLDSIRQHLLEENLNKSGDG------ICSIIQDHHYKGAAVENG--VQFKGV 60

Query: 61  RRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSD 120
           RRRPWGKYAAEIRDPKRNGARTWLGTF+TA +AALAYDRAAFKIRGAKAKLNFPHLIDSD
Sbjct: 61  RRRPWGKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFPHLIDSD 120

Query: 121 SIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRTSA 157
           S  STS STS         S   PPSPTHA H+TSA
Sbjct: 121 STHSTSASTS---------SANPPPSPTHAHHQTSA 139

[Close]

BLAST of Clc05G00170 vs. NCBI nr
Match: XP_022151925.1 (ethylene-responsive transcription factor 14-like [Momordica charantia])

HSP 1 Score: 134.4 bits (337), Expect = 8.5e-28
Identity = 87/158 (55.06%), Postives = 104/158 (65.82%), Query Frame = 0


Query: 8   DVLESIRQHLLEEN-----NSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVRR 67
           D+LE IR+HLLEE      +  + + N +   +S   +     E     V + QFKGVRR
Sbjct: 7   DLLEWIREHLLEEKMDPDPDPAASNANANANANSNSEVGGKGSELG---VGVQQFKGVRR 66

Query: 68  RPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSDSI 127
           RPWGKYAAEIRDP R GARTWLGTF TA+DAALAYDRAAFK+RGAKAKLNFPHLIDS+  
Sbjct: 67  RPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKLNFPHLIDSN-- 126

Query: 128 WSTSTSTSASTSTSTSASTKRPPSPTHAQHRTSASKRR 161
            S   S + +T+       KRP  PT   H+TS S+RR
Sbjct: 127 -SQPQSLACNTN-------KRPRFPT---HQTSTSQRR 148

[Close]

BLAST of Clc05G00170 vs. NCBI nr
Match: XP_010544359.1 (PREDICTED: ethylene-responsive transcription factor 13-like [Tarenaya hassleriana])

HSP 1 Score: 132.5 bits (332), Expect = 3.2e-27
Identity = 69/121 (57.02%), Postives = 89/121 (73.55%), Query Frame = 0


Query: 2   SSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVR 61
           SS   S VLESIR++LLEE+ S            S+   + ++K    + V+   ++GVR
Sbjct: 10  SSSSSSKVLESIRRYLLEEDES--------EEPRSSTEEEGNRKREPPSPVRGGSYRGVR 69

Query: 62  RRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSDS 121
           RRPWGKYAAEIRDPK+NGAR WLGT++TA+DAA+AYDRAAF++RGAKAKLNFPHLI +D 
Sbjct: 70  RRPWGKYAAEIRDPKKNGARIWLGTYETAEDAAMAYDRAAFEMRGAKAKLNFPHLIGTDG 122

Query: 122 I 123
           +
Sbjct: 130 V 122

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BLAST of Clc05G00170 vs. ExPASy Swiss-Prot
Match: Q8L9K1 (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=ERF13 PE=1 SV=2)

HSP 1 Score: 106.7 bits (265), Expect = 2.5e-22
Identity = 57/105 (54.29%), Postives = 72/105 (68.57%), Query Frame = 0


Query: 55  LQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFP 114
           +Q++GVRRRPWGK+AAEIRDPK+NGAR WLGT++T +DAA+AYDRAAF++RG+KAKLNFP
Sbjct: 90  MQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFP 149

Query: 115 HLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRTSASKR 160
           HLI            S           +R P P+ +   TS  KR
Sbjct: 150 HLIG-----------SCKYEPVRIRPRRRSPEPSVSDQLTSEQKR 183

[Close]

BLAST of Clc05G00170 vs. ExPASy Swiss-Prot
Match: Q9LW50 (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris OX=4096 GN=ERF2 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.8e-21
Identity = 43/61 (70.49%), Postives = 57/61 (93.44%), Query Frame = 0


Query: 57  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHL 116
           ++GVR+RPWGK+AAEIRDP +NGAR WLGT++TA++AALAYD+AA+++RG+KA LNFPH 
Sbjct: 103 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHR 162

Query: 117 I 118
           I
Sbjct: 163 I 163

[Close]

BLAST of Clc05G00170 vs. ExPASy Swiss-Prot
Match: O80338 (Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=ERF2 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.6e-21
Identity = 53/93 (56.99%), Postives = 76/93 (81.72%), Query Frame = 0


Query: 52  VQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKL 111
           V+   ++GVR+RPWGK+AAEIRDP +NGAR WLGTF+TA+DAALAYD AAF++RG++A L
Sbjct: 112 VKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALL 171

Query: 112 NFPHLIDS---DSIWSTSTSTSASTSTSTSAST 142
           NFP  ++S   D +  TS  +S+S+S+S+S+++
Sbjct: 172 NFPLRVNSGEPDPVRITSKRSSSSSSSSSSSTS 204

[Close]

BLAST of Clc05G00170 vs. ExPASy Swiss-Prot
Match: Q9LTC5 (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana OX=3702 GN=ERF098 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-20
Identity = 56/92 (60.87%), Postives = 73/92 (79.35%), Query Frame = 0


Query: 56  QFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPH 115
           +F+GVRRRPWGK+AAEIRDP RNGAR WLGTF+TA++AA AYDRAAF +RG  A LNFP+
Sbjct: 19  RFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNFPN 78

Query: 116 ----LIDSDSI---WSTSTSTSASTSTSTSAS 141
                +D  S+   +++S+S+S+S STST+ S
Sbjct: 79  EYYPRMDDYSLRPPYASSSSSSSSGSTSTNVS 110

[Close]

BLAST of Clc05G00170 vs. ExPASy Swiss-Prot
Match: O80337 (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana OX=3702 GN=ERF1A PE=1 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 1.4e-20
Identity = 53/90 (58.89%), Postives = 69/90 (76.67%), Query Frame = 0


Query: 57  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHL 116
           ++GVR+RPWGK+AAEIRDP +NGAR WLGTF+TA+DAALAYDRAAF++RG++A LNFP  
Sbjct: 148 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLR 207

Query: 117 IDS---DSIWSTSTSTSASTSTSTSASTKR 144
           ++S   D +   S  +S S+S    A  KR
Sbjct: 208 VNSGEPDPVRIKSKRSSFSSSNENGAPKKR 237

[Close]

BLAST of Clc05G00170 vs. ExPASy TrEMBL
Match: A0A5A7TYW8 (Ethylene-responsive transcription factor 13-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00150 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.6e-48
Identity = 114/152 (75.00%), Postives = 122/152 (80.26%), Query Frame = 0


Query: 1   MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGV 60
           MSSWRESDVLESIRQHLL+EN + SG G+GDG  S  II  HH K AA     + +FKGV
Sbjct: 1   MSSWRESDVLESIRQHLLKENLNKSGDGDGDGIFS--IIQDHHYKAAA-----VEKFKGV 60

Query: 61  RRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSD 120
           RRRPWGKYAAEIRDPKRNGARTWLGTF+TAQ+AALAYDRAAFKIRGAKAKLNFPHLIDS 
Sbjct: 61  RRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSA 120

Query: 121 SIWSTSTSTSASTSTSTSASTKRPPSPTHAQH 153
           S +STS STS         STKRPPSPTHA H
Sbjct: 121 STYSTSASTS---------STKRPPSPTHADH 136

[Close]

BLAST of Clc05G00170 vs. ExPASy TrEMBL
Match: A0A1S3AZ89 (ethylene-responsive transcription factor 13-like OS=Cucumis melo OX=3656 GN=LOC103484163 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.6e-48
Identity = 114/152 (75.00%), Postives = 122/152 (80.26%), Query Frame = 0


Query: 1   MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGV 60
           MSSWRESDVLESIRQHLL+EN + SG G+GDG  S  II  HH K AA     + +FKGV
Sbjct: 1   MSSWRESDVLESIRQHLLKENLNKSGDGDGDGIFS--IIQDHHYKAAA-----VEKFKGV 60

Query: 61  RRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSD 120
           RRRPWGKYAAEIRDPKRNGARTWLGTF+TAQ+AALAYDRAAFKIRGAKAKLNFPHLIDS 
Sbjct: 61  RRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSA 120

Query: 121 SIWSTSTSTSASTSTSTSASTKRPPSPTHAQH 153
           S +STS STS         STKRPPSPTHA H
Sbjct: 121 STYSTSASTS---------STKRPPSPTHADH 136

[Close]

BLAST of Clc05G00170 vs. ExPASy TrEMBL
Match: A0A0A0L2V9 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116720 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.3e-45
Identity = 111/156 (71.15%), Postives = 118/156 (75.64%), Query Frame = 0


Query: 1   MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGV 60
           MSSWRESDVL+SIRQHLLEEN + SG G        +II  HH K AA      +QFKGV
Sbjct: 1   MSSWRESDVLDSIRQHLLEENLNKSGDG------ICSIIQDHHYKGAAVENG--VQFKGV 60

Query: 61  RRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSD 120
           RRRPWGKYAAEIRDPKRNGARTWLGTF+TA +AALAYDRAAFKIRGAKAKLNFPHLIDSD
Sbjct: 61  RRRPWGKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFPHLIDSD 120

Query: 121 SIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRTSA 157
           S  STS STS         S   PPSPTHA H+TSA
Sbjct: 121 STHSTSASTS---------SANPPPSPTHAHHQTSA 139

[Close]

BLAST of Clc05G00170 vs. ExPASy TrEMBL
Match: A0A6J1DCJ3 (ethylene-responsive transcription factor 14-like OS=Momordica charantia OX=3673 GN=LOC111019776 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 4.1e-28
Identity = 87/158 (55.06%), Postives = 104/158 (65.82%), Query Frame = 0


Query: 8   DVLESIRQHLLEEN-----NSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVRR 67
           D+LE IR+HLLEE      +  + + N +   +S   +     E     V + QFKGVRR
Sbjct: 7   DLLEWIREHLLEEKMDPDPDPAASNANANANANSNSEVGGKGSELG---VGVQQFKGVRR 66

Query: 68  RPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSDSI 127
           RPWGKYAAEIRDP R GARTWLGTF TA+DAALAYDRAAFK+RGAKAKLNFPHLIDS+  
Sbjct: 67  RPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKLNFPHLIDSN-- 126

Query: 128 WSTSTSTSASTSTSTSASTKRPPSPTHAQHRTSASKRR 161
            S   S + +T+       KRP  PT   H+TS S+RR
Sbjct: 127 -SQPQSLACNTN-------KRPRFPT---HQTSTSQRR 148

[Close]

BLAST of Clc05G00170 vs. ExPASy TrEMBL
Match: A0A0A0L893 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116730 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 3.0e-26
Identity = 74/137 (54.01%), Postives = 93/137 (67.88%), Query Frame = 0


Query: 10  LESIRQHLLEE--------NN----------SGSGSG-------NGDGRESSAIIIQHHK 69
           LE IR+HLLE+        NN          S SG+G       N    + S+III+ + 
Sbjct: 19  LEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSNNNNNMVDQMSSIIIRDNP 78

Query: 70  KEAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKI 122
           +E ++   + LQF+GVRRRPWGKYAAEIRDP + GAR WLGT+ TAQDAALAYDRAAF++
Sbjct: 79  EEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQM 138

[Close]

BLAST of Clc05G00170 vs. TAIR 10
Match: AT2G44840.1 (ethylene-responsive element binding factor 13 )

HSP 1 Score: 106.7 bits (265), Expect = 1.8e-23
Identity = 57/105 (54.29%), Postives = 72/105 (68.57%), Query Frame = 0


Query: 55  LQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFP 114
           +Q++GVRRRPWGK+AAEIRDPK+NGAR WLGT++T +DAA+AYDRAAF++RG+KAKLNFP
Sbjct: 90  MQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFP 149

Query: 115 HLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRTSASKR 160
           HLI            S           +R P P+ +   TS  KR
Sbjct: 150 HLIG-----------SCKYEPVRIRPRRRSPEPSVSDQLTSEQKR 183

[Close]

BLAST of Clc05G00170 vs. TAIR 10
Match: AT5G47220.1 (ethylene responsive element binding factor 2 )

HSP 1 Score: 102.8 bits (255), Expect = 2.6e-22
Identity = 53/93 (56.99%), Postives = 76/93 (81.72%), Query Frame = 0


Query: 52  VQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKL 111
           V+   ++GVR+RPWGK+AAEIRDP +NGAR WLGTF+TA+DAALAYD AAF++RG++A L
Sbjct: 112 VKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALL 171

Query: 112 NFPHLIDS---DSIWSTSTSTSASTSTSTSAST 142
           NFP  ++S   D +  TS  +S+S+S+S+S+++
Sbjct: 172 NFPLRVNSGEPDPVRITSKRSSSSSSSSSSSTS 204

[Close]

BLAST of Clc05G00170 vs. TAIR 10
Match: AT3G23230.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 101.3 bits (251), Expect = 7.5e-22
Identity = 56/92 (60.87%), Postives = 73/92 (79.35%), Query Frame = 0


Query: 56  QFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPH 115
           +F+GVRRRPWGK+AAEIRDP RNGAR WLGTF+TA++AA AYDRAAF +RG  A LNFP+
Sbjct: 19  RFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNFPN 78

Query: 116 ----LIDSDSI---WSTSTSTSASTSTSTSAS 141
                +D  S+   +++S+S+S+S STST+ S
Sbjct: 79  EYYPRMDDYSLRPPYASSSSSSSSGSTSTNVS 110

[Close]

BLAST of Clc05G00170 vs. TAIR 10
Match: AT4G17500.1 (ethylene responsive element binding factor 1 )

HSP 1 Score: 100.9 bits (250), Expect = 9.7e-22
Identity = 53/90 (58.89%), Postives = 69/90 (76.67%), Query Frame = 0


Query: 57  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHL 116
           ++GVR+RPWGK+AAEIRDP +NGAR WLGTF+TA+DAALAYDRAAF++RG++A LNFP  
Sbjct: 148 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLR 207

Query: 117 IDS---DSIWSTSTSTSASTSTSTSASTKR 144
           ++S   D +   S  +S S+S    A  KR
Sbjct: 208 VNSGEPDPVRIKSKRSSFSSSNENGAPKKR 237

[Close]

BLAST of Clc05G00170 vs. TAIR 10
Match: AT5G43410.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 2.2e-21
Identity = 51/86 (59.30%), Postives = 68/86 (79.07%), Query Frame = 0


Query: 56  QFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPH 115
           +++GVRRRPWGKYAAEIRD +++G R WLGTFDTA++AA AYD+AA+ +RG  A LNFPH
Sbjct: 14  KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPH 73

Query: 116 LIDSDSIWSTSTSTSASTSTSTSAST 142
             +  S  S+ST+ + S+S S SAS+
Sbjct: 74  EYNMGSGVSSSTAMAGSSSASASASS 99

The following BLAST results are available for this feature:

BLAST of Clc05G00170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038907088.1	7.6e-61	80.72	ethylene-responsive transcription factor 13-like [Benincasa hispida]	[more]
XP_008439349.1	3.3e-48	75.00	PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis melo] >KAA0...	[more]
XP_004134276.1	2.6e-45	71.15	ethylene-responsive transcription factor 13 [Cucumis sativus] >KGN56335.1 hypoth...	[more]
XP_022151925.1	8.5e-28	55.06	ethylene-responsive transcription factor 14-like [Momordica charantia]	[more]
XP_010544359.1	3.2e-27	57.02	PREDICTED: ethylene-responsive transcription factor 13-like [Tarenaya hasslerian...	[more]

BLAST of Clc05G00170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9K1	2.5e-22	54.29	Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q9LW50	2.8e-21	70.49	Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris OX=4096 GN=ER...	[more]
O80338	3.6e-21	56.99	Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q9LTC5	1.0e-20	60.87	Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana OX=3702 ...	[more]
O80337	1.4e-20	58.89	Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana OX=3702 GN=E...	[more]

BLAST of Clc05G00170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TYW8	1.6e-48	75.00	Ethylene-responsive transcription factor 13-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3AZ89	1.6e-48	75.00	ethylene-responsive transcription factor 13-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0L2V9	1.3e-45	71.15	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116720 PE=...	[more]
A0A6J1DCJ3	4.1e-28	55.06	ethylene-responsive transcription factor 14-like OS=Momordica charantia OX=3673 ...	[more]
A0A0A0L893	3.0e-26	54.01	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116730 PE=...	[more]

BLAST of Clc05G00170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44840.1	1.8e-23	54.29	ethylene-responsive element binding factor 13	[more]
AT5G47220.1	2.6e-22	56.99	ethylene responsive element binding factor 2	[more]
AT3G23230.1	7.5e-22	60.87	Integrase-type DNA-binding superfamily protein	[more]
AT4G17500.1	9.7e-22	58.89	ethylene responsive element binding factor 1	[more]
AT5G43410.1	2.2e-21	59.30	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 96..116 score: 58.7 coord: 57..68 score: 58.03
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 56..120 e-value: 3.7E-35 score: 132.8
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 57..106 e-value: 3.9E-14 score: 52.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 56..114 score: 23.169235
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 56..116 e-value: 9.28256E-28 score: 96.1866
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 55..115 e-value: 6.8E-28 score: 98.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..160
None	No IPR available	PANTHER	PTHR31190:SF222	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF105	coord: 43..153
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 43..153
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 57..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G00170.1	Clc05G00170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity