Clc05G00100 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCAAACCCTCCTGATCAACGGCAACCTAACCAGGAAATTGCAAACAGGAGTGCATTGGCTGTCCTGTTTGAATCAATGCTGCCTTGGGTTAACTATGGGGATGAAAGAGATGTTGGTGTTGAGGAAGGTAACCAATTCGATGAGCATGATGACCATTAAGTTGTCAATCCTTCTTGAGTCGCCGGTTCTCTTCAAATGCTTTGAGAGAATGGACTTAATGTGATGTGGCATAGATCACGTATGCGCAACTTGCCTTGTGTTGGAGCAGTTGTATCCAGTTTTGTTTACTGCTATCTGTCACTGGTTGCCAACCGATAATGCTTGGTACTGGTAGTTGTACTTGTATGTAGGAAGTTTTTGAATTCCCAACGCATTTGCTGTATTTCTCAAGCAAAGACGAACAATTCCCAAAATTGGAGGAAAATGTTTTCTTACTGGTTGGGGTGTATATAGAATAATAGAGAGGGCGTATGTTGTGGATGGTGCGGTTGTGAGGACTGACTGTGTCCCAATCATTACATACAGCTGCGTCAGTTGGATTCAGGAGATTTATAGTTCAGCCGGACGGCGCGGGGGGCCGCACCATCATTATGATTAGGCGCCCTTGCATTGCCCTGGCCCTGGCCCCCCAACCCATCATTTCGCTCGCACCCCAAACCAATTGCCAATAGCATGCAAAGTTATTTGCAGTGTCTTGATCATATGCTAATACCAAGCGTGCTTGTGGTCCTCTAATAAATAATTATCATAATTATTTTACTTGCTTAATAATTGTCATCATTATTATTTTACTTGCATGGTCCTCTTCTCTGCAGTAAGCCCCACTGCCAGAGGCTCTGCTAGTTGTTTTTGTTAAAATTAGGGGCCATTTTAAGTATTTCAATTGTGATTTGTGCAAAATGAAAATTTAATATCCGGTTATGATAGCATGCCAACTCTTCGTTACCATTTAAATTAATAGTACTATTACAATGAAAATCTACAGCTAATAGTTCATAAGATAGAGTGTAGGAACTGTGAAAGCAACACAAGTAGTGATAGAATGTGGGGATTACGGTTGTAATTTAACCAATTGTAATACAATAAATATAAATATGAAAGAAGACTTTTATTTTTAAATGGAGGGCTTTAGCACGTTAGCTTGCTTTTTCATCCTTTTCTAAGCATGTAATAAAAGTGAGAAGAAATTCGCCAGAGTAGGTCGGTTACAAAGTCAAAGAGAGCCAAAAGTCTGGTCGCAGCAGCAGCCCTATAAAAATGGATAGGGAAGAGAGCAATGAGGTGTGGGAGGCGTTGGCATAAGCGAAGAGACGGAAGGAAATAAAAGTTGGGAAACCCGATGGCCATGGCTAGCGGCTCAAATGGAAGTAATCTGAAGAATGGTGTCATAGCATTACTGGTTCCGCTTCCCTCCCATTCTCTTTTACCTCTGTTTCCTCAGCAAACTGTGGTGGTGGTAGCGGTCTCTGGAAATGGTGCAATCACCATCCTCTTTTGTTGGTGAATGCACTCTTCTTCCTCAATGTCAACCTTGTCTTCTGGCTCATCAGCCATCTCCAGTCCAGCCACTGGGTGAGACTCAAAATTCTTCTCAATTAAACTACACCTACTATATGTTATTAATTGGTGCACTGCAGATGATCGACCTGTACTGGACTTTGATACCCGTGATGCTGGTTCACTATTTTGCTTCTCACCCCTTAGCTGAGTATAATGAATTGAGGTCGTGGGTCGCAGTTGCTTTGACTTGGATTTGGAGCATAAGGCTTTCCCACAACTACTTAAGGCGGGAGGGATGGCAGTTGGGAGCCAGAGAGGACTGGAGGTTCACGGATATGCGGCGACAGTACGGAAAGAAACTGGTGGTGGGCTTCTTTCTTCGCCGTCTACCTTTCACAGCAGGTAATCTAATAACTAATCAAGGAATTAGCTTTCACATACTGGTGGTGGTGGTTGATTTGGTTTCAACTTTTGTACAGGTATTTCTGATGGGCGTATGCCTGCCTCTGTACGTTGTCCACTCAGTTGAGGAGGGATTGAAGTTGTGGGATTTGGTAGCCATCTTTGTGTGTGGTTGTGGAATTGGGATGGCCTACTTTGCTGACACCAGCTGCATGAATTCGTGAGCAGGAACAGGAAGCTGAAAATGAGTGGAAAATCGTTGGTGCCCATTCTTGAGGAGGGATTGTGGCGTTACTGTCGACACCCAAACTACTTTGGAGAGCAGTTGTGGTGGTGGGGGCTTGGGATATTGGGATGGGGTTTAGGTCAGAGATGGAGCCTTGCAGGAGCGTTGCTCAACACTATATGCTTAGCTTATGTAACCAAACTGGTTGAAGACCGAATGGTGAAACAACACTACAGAGCAGAAGCTTACAGGCAATATCAGAAGACCACATCAGTATGGATACCTTGGTTCAGGACATCACTTCACAAGGAAAAGAATATGTGACTTCACTTCTATCTTTTTATTATTATTATTATTATTTTAATGAATTCTCAGTTGTGGATGCACCGAGACTGAGCTGTGTTGTTTTATGTTATCTTGTTGTAATGTAAGTGTAACATTTCTCACGTGAATTATATTGTGCAACAAAAAGTACGGTTTTATCCGTTGTCTATTCTATCAATAAAACCGCCTTTGTCTTGTTTT ATGCCAAACCCTCCTGATCAACGGCAACCTAACCAGGAAATTGCAAACAGGAGTGCATTGGCTGTCCTGTTTGAATCAATGCTGCCTTGGGTTAACTATGGGGATGAAAGAGATGTTGGTGTTGAGGAAGATCACGTATGCGCAACTTGCCTTGTGTTGGAGCAGTTGTATCCAGTTTTGTTTACTGCTATCTGTCACTGGTTGCCAACCGATAATGCTTGGTACTGCATTACTGGTTCCGCTTCCCTCCCATTCTCTTTTACCTCTGTTTCCTCAGCAAACTGTGGTGGTGGTAGCGGTCTCTGGAAATGGTGCAATCACCATCCTCTTTTGTTGGTGAATGCACTCTTCTTCCTCAATGTCAACCTTGTCTTCTGGCTCATCAGCCATCTCCAGTCCAGCCACTGGATGATCGACCTGTACTGGACTTTGATACCCGTGATGCTGGTTCACTATTTTGCTTCTCACCCCTTAGCTGAGTATAATGAATTGAGGTCGTGGGTCGCAGTTGCTTTGACTTGGATTTGGAGCATAAGGCTTTCCCACAACTACTTAAGGCGGGAGGGATGGCAGTTGGGAGCCAGAGAGGACTGGAGGTTCACGGATATGCGGCGACAGTACGGAAAGAAACTGGTGGTGGGCTTCTTTCTTCGCCGTCTACCTTTCACAGCAGGTATTTCTGATGGGCGTATGCCTGCCTCTCTGCATGAATTCGTGAGCAGGAACAGGAAGCTGAAAATGAGTGGAAAATCGTTGGTGCCCATTCTTGAGGAGGGATTGTGGCGTTACTGTCGACACCCAAACTACTTTGGAGAGCAGTTGTGGTGGTGGGGGCTTGGGATATTGGGATGGGGTTTAGGTCAGAGATGGAGCCTTGCAGGAGCGTTGCTCAACACTATATGCTTAGCTTATGTAACCAAACTGGTTGAAGACCGAATGGTGAAACAACACTACAGAGCAGAAGCTTACAGGCAATATCAGAAGACCACATCAGTATGGATACCTTGGTTCAGGACATCACTTCACAAGGAAAAGAATATGTGACTTCACTTCTATCTTTTTATTATTATTATTATTATTTTAATGAATTCTCAGTTGTGGATGCACCGAGACTGAGCTGTGTTGTTTTATGTTATCTTGTTGTAATGTAAGTGTAACATTTCTCACGTGAATTATATTGTGCAACAAAAAGTACGGTTTTATCCGTTGTCTATTCTATCAATAAAACCGCCTTTGTCTTGTTTT ATGCCAAACCCTCCTGATCAACGGCAACCTAACCAGGAAATTGCAAACAGGAGTGCATTGGCTGTCCTGTTTGAATCAATGCTGCCTTGGGTTAACTATGGGGATGAAAGAGATGTTGGTGTTGAGGAAGATCACGTATGCGCAACTTGCCTTGTGTTGGAGCAGTTGTATCCAGTTTTGTTTACTGCTATCTGTCACTGGTTGCCAACCGATAATGCTTGGTACTGCATTACTGGTTCCGCTTCCCTCCCATTCTCTTTTACCTCTGTTTCCTCAGCAAACTGTGGTGGTGGTAGCGGTCTCTGGAAATGGTGCAATCACCATCCTCTTTTGTTGGTGAATGCACTCTTCTTCCTCAATGTCAACCTTGTCTTCTGGCTCATCAGCCATCTCCAGTCCAGCCACTGGATGATCGACCTGTACTGGACTTTGATACCCGTGATGCTGGTTCACTATTTTGCTTCTCACCCCTTAGCTGAGTATAATGAATTGAGGTCGTGGGTCGCAGTTGCTTTGACTTGGATTTGGAGCATAAGGCTTTCCCACAACTACTTAAGGCGGGAGGGATGGCAGTTGGGAGCCAGAGAGGACTGGAGGTTCACGGATATGCGGCGACAGTACGGAAAGAAACTGGTGGTGGGCTTCTTTCTTCGCCGTCTACCTTTCACAGCAGGTATTTCTGATGGGCGTATGCCTGCCTCTCTGCATGAATTCGTGAGCAGGAACAGGAAGCTGAAAATGAGTGGAAAATCGTTGGTGCCCATTCTTGAGGAGGGATTGTGGCGTTACTGTCGACACCCAAACTACTTTGGAGAGCAGTTGTGGTGGTGGGGGCTTGGGATATTGGGATGGGGTTTAGGTCAGAGATGGAGCCTTGCAGGAGCGTTGCTCAACACTATATGCTTAGCTTATGTAACCAAACTGGTTGAAGACCGAATGGTGAAACAACACTACAGAGCAGAAGCTTACAGGCAATATCAGAAGACCACATCAGTATGGATACCTTGGTTCAGGACATCACTTCACAAGGAAAAGAATATGTGA MPNPPDQRQPNQEIANRSALAVLFESMLPWVNYGDERDVGVEEDHVCATCLVLEQLYPVLFTAICHWLPTDNAWYCITGSASLPFSFTSVSSANCGGGSGLWKWCNHHPLLLVNALFFLNVNLVFWLISHLQSSHWMIDLYWTLIPVMLVHYFASHPLAEYNELRSWVAVALTWIWSIRLSHNYLRREGWQLGAREDWRFTDMRRQYGKKLVVGFFLRRLPFTAGISDGRMPASLHEFVSRNRKLKMSGKSLVPILEEGLWRYCRHPNYFGEQLWWWGLGILGWGLGQRWSLAGALLNTICLAYVTKLVEDRMVKQHYRAEAYRQYQKTTSVWIPWFRTSLHKEKNM Homology
BLAST of Clc05G00100 vs. NCBI nr
Match: XP_038893369.1 (uncharacterized protein C594.04c [Benincasa hispida]) HSP 1 Score: 442.6 bits (1137), Expect = 3.2e-120 Identity = 218/291 (74.91%), Postives = 227/291 (78.01%), Query Frame = 0
BLAST of Clc05G00100 vs. NCBI nr
Match: XP_004134275.1 (uncharacterized protein C594.04c [Cucumis sativus] >KGN56330.1 hypothetical protein Csa_011415 [Cucumis sativus]) HSP 1 Score: 441.8 bits (1135), Expect = 5.4e-120 Identity = 216/291 (74.23%), Postives = 229/291 (78.69%), Query Frame = 0
BLAST of Clc05G00100 vs. NCBI nr
Match: KAG7028469.1 (Transcription factor 25 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 441.0 bits (1133), Expect = 9.2e-120 Identity = 236/392 (60.20%), Postives = 269/392 (68.62%), Query Frame = 0
BLAST of Clc05G00100 vs. NCBI nr
Match: XP_008437759.1 (PREDICTED: uncharacterized protein C594.04c [Cucumis melo] >KAA0048799.1 uncharacterized protein E6C27_scaffold171G00110 [Cucumis melo var. makuwa] >TYK20751.1 uncharacterized protein E5676_scaffold291G00100 [Cucumis melo var. makuwa]) HSP 1 Score: 431.4 bits (1108), Expect = 7.3e-117 Identity = 212/292 (72.60%), Postives = 227/292 (77.74%), Query Frame = 0
BLAST of Clc05G00100 vs. NCBI nr
Match: KAG6597001.1 (putative calcium-binding protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 416.8 bits (1070), Expect = 1.9e-112 Identity = 201/291 (69.07%), Postives = 225/291 (77.32%), Query Frame = 0
BLAST of Clc05G00100 vs. ExPASy TrEMBL
Match: A0A0A0L2V4 (S5A_REDUCTASE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116670 PE=4 SV=1) HSP 1 Score: 441.8 bits (1135), Expect = 2.6e-120 Identity = 216/291 (74.23%), Postives = 229/291 (78.69%), Query Frame = 0
BLAST of Clc05G00100 vs. ExPASy TrEMBL
Match: A0A5D3DAX2 (S5A_REDUCTASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00100 PE=4 SV=1) HSP 1 Score: 431.4 bits (1108), Expect = 3.5e-117 Identity = 212/292 (72.60%), Postives = 227/292 (77.74%), Query Frame = 0
BLAST of Clc05G00100 vs. ExPASy TrEMBL
Match: A0A1S3AUR9 (uncharacterized protein C594.04c OS=Cucumis melo OX=3656 GN=LOC103483096 PE=4 SV=1) HSP 1 Score: 431.4 bits (1108), Expect = 3.5e-117 Identity = 212/292 (72.60%), Postives = 227/292 (77.74%), Query Frame = 0
BLAST of Clc05G00100 vs. ExPASy TrEMBL
Match: A0A6J1F9X4 (uncharacterized protein C594.04c OS=Cucurbita moschata OX=3662 GN=LOC111442154 PE=4 SV=1) HSP 1 Score: 416.8 bits (1070), Expect = 9.0e-113 Identity = 201/291 (69.07%), Postives = 225/291 (77.32%), Query Frame = 0
BLAST of Clc05G00100 vs. ExPASy TrEMBL
Match: A0A6J1I9U8 (uncharacterized protein C594.04c OS=Cucurbita maxima OX=3661 GN=LOC111472914 PE=4 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 1.9e-110 Identity = 200/294 (68.03%), Postives = 223/294 (75.85%), Query Frame = 0
BLAST of Clc05G00100 vs. TAIR 10
Match: AT2G46890.1 (Protein of unknown function (DUF1295) ) HSP 1 Score: 337.8 bits (865), Expect = 1.0e-92 Identity = 164/295 (55.59%), Postives = 199/295 (67.46%), Query Frame = 0
BLAST of Clc05G00100 vs. TAIR 10
Match: AT1G18180.1 (Protein of unknown function (DUF1295) ) HSP 1 Score: 69.7 bits (169), Expect = 5.2e-12 Identity = 65/196 (33.16%), Postives = 89/196 (45.41%), Query Frame = 0
BLAST of Clc05G00100 vs. TAIR 10
Match: AT1G73650.1 (Protein of unknown function (DUF1295) ) HSP 1 Score: 59.7 bits (143), Expect = 5.4e-09 Identity = 32/78 (41.03%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of Clc05G00100 vs. TAIR 10
Match: AT1G73650.2 (Protein of unknown function (DUF1295) ) HSP 1 Score: 59.7 bits (143), Expect = 5.4e-09 Identity = 32/78 (41.03%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of Clc05G00100 vs. TAIR 10
Match: AT1G73650.3 (Protein of unknown function (DUF1295) ) HSP 1 Score: 59.7 bits (143), Expect = 5.4e-09 Identity = 32/78 (41.03%), Postives = 46/78 (58.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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