Clc04G13240 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc04G13240
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	CASP-like protein
Location	ClcChr04: 26472657 .. 26473511 (+)
RNA-Seq Expression	Clc04G13240
Synteny	Clc04G13240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCTAAGGTGGTAGCGTTGATTGGGGTTGGACTTAGAATCTTCATCTTCCTATGTCTCCTCATTGCCTTAGTCGTAATTGCCACTGACAAATTGGCCCTCATTGATGGCTTCAAAGCAACCTTCAATGATGTCCAAGGATACAGGTTCGCTGCTCTGCCCATCAATCTCATTTACAATAGTAATCATTACAAATTCACTACCAGAAGTTTTGTTTCCTCATACTGTTCTTGCAATGCAATGCAGGTACGTATTGTCTGTTGCAATTATAGGGTTGGCCCATACAATTTTACAACTGGGTTTCTCTATATACCATGTGATTACCCAAAACATACCCTTTTGGAATGGGCTTCCACTATTCAACTACTACGCAGACCAGGTTGGTGACTTAACCAATTATTAATTTCTTTAGAACTTTGGGCTCACGAGTGAACCAAATGGCATGGAAATTTGGGAATGTATATGCAGGTGATAACTTGGGTGTTGGCCACGGCGGTTGGGGCTGGCTTTGCGGTCACCGCAGAGCTGAAAAGATTCGTGGATTCAAGAATTGACAGGGAACTTGGGGATTACGGGTTCTTCAGTCCACAAGTGGATGAGCAGAAATCTTTGATTGACGAATTCTTCGATAAGGCCTATATTGCCACTGCCATTCTCTTCCTTGCTTTCCTCTCCATGGCCACTCTCCTCCTTCTCTCCCCGTTCAATCGGATCAAACCAACTCCTCGCCCCACACAAGATCTCGAGGCCCAAAAGCTCGAGGCCCAATCTTCCCAGGCCCAATCTTCCCAGGCCCAATCGTCCCAGGCCCAACCTACTGAGGCCCACTCACCGGAGCCCCCTTCCGGTTGA

mRNA sequence

ATGGATCCTAAGGTGGTAGCGTTGATTGGGGTTGGACTTAGAATCTTCATCTTCCTATGTCTCCTCATTGCCTTAGTCGTAATTGCCACTGACAAATTGGCCCTCATTGATGGCTTCAAAGCAACCTTCAATGATGTCCAAGGATACAGGTACGTATTGTCTGTTGCAATTATAGGGTTGGCCCATACAATTTTACAACTGGGTTTCTCTATATACCATGTGATTACCCAAAACATACCCTTTTGGAATGGGCTTCCACTATTCAACTACTACGCAGACCAGGTGATAACTTGGGTGTTGGCCACGGCGGTTGGGGCTGGCTTTGCGGTCACCGCAGAGCTGAAAAGATTCGTGGATTCAAGAATTGACAGGGAACTTGGGGATTACGGGTTCTTCAGTCCACAAGTGGATGAGCAGAAATCTTTGATTGACGAATTCTTCGATAAGGCCTATATTGCCACTGCCATTCTCTTCCTTGCTTTCCTCTCCATGGCCACTCTCCTCCTTCTCTCCCCGTTCAATCGGATCAAACCAACTCCTCGCCCCACACAAGATCTCGAGGCCCAAAAGCTCGAGGCCCAATCTTCCCAGGCCCAATCTTCCCAGGCCCAATCGTCCCAGGCCCAACCTACTGAGGCCCACTCACCGGAGCCCCCTTCCGGTTGA

Coding sequence (CDS)

ATGGATCCTAAGGTGGTAGCGTTGATTGGGGTTGGACTTAGAATCTTCATCTTCCTATGTCTCCTCATTGCCTTAGTCGTAATTGCCACTGACAAATTGGCCCTCATTGATGGCTTCAAAGCAACCTTCAATGATGTCCAAGGATACAGGTACGTATTGTCTGTTGCAATTATAGGGTTGGCCCATACAATTTTACAACTGGGTTTCTCTATATACCATGTGATTACCCAAAACATACCCTTTTGGAATGGGCTTCCACTATTCAACTACTACGCAGACCAGGTGATAACTTGGGTGTTGGCCACGGCGGTTGGGGCTGGCTTTGCGGTCACCGCAGAGCTGAAAAGATTCGTGGATTCAAGAATTGACAGGGAACTTGGGGATTACGGGTTCTTCAGTCCACAAGTGGATGAGCAGAAATCTTTGATTGACGAATTCTTCGATAAGGCCTATATTGCCACTGCCATTCTCTTCCTTGCTTTCCTCTCCATGGCCACTCTCCTCCTTCTCTCCCCGTTCAATCGGATCAAACCAACTCCTCGCCCCACACAAGATCTCGAGGCCCAAAAGCTCGAGGCCCAATCTTCCCAGGCCCAATCTTCCCAGGCCCAATCGTCCCAGGCCCAACCTACTGAGGCCCACTCACCGGAGCCCCCTTCCGGTTGA

Protein sequence

MDPKVVALIGVGLRIFIFLCLLIALVVIATDKLALIDGFKATFNDVQGYRYVLSVAIIGLAHTILQLGFSIYHVITQNIPFWNGLPLFNYYADQVITWVLATAVGAGFAVTAELKRFVDSRIDRELGDYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRIKPTPRPTQDLEAQKLEAQSSQAQSSQAQSSQAQPTEAHSPEPPSG

Homology

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BLAST of Clc04G13240 vs. NCBI nr
Match: XP_038894422.1 (CASP-like protein 4D1 [Benincasa hispida])

HSP 1 Score: 331.6 bits (849), Expect = 5.0e-87
Identity = 179/208 (86.06%), Postives = 191/208 (91.83%), Query Frame = 0


Query: 1   MDPKVVALIGVGLRIFIFLCLLIALVVIATDKLALIDGFKATFNDVQGYRYVLSVAIIGL 60
           MDPKVVALIGVGLRIFIF+CLLIALVVIATDKLALI GFKATFNDV GYRY+LSVAIIGL
Sbjct: 1   MDPKVVALIGVGLRIFIFICLLIALVVIATDKLALISGFKATFNDVHGYRYMLSVAIIGL 60

Query: 61  AHTILQLGFSIYHVITQNIPFWNGLPLFNYYADQVITWVLATAVGAGFAVTAELKRFVDS 120
           AHTILQL FSIYH++TQNIP WNGLP FNYYADQVITWVLATA GAGFAV+AELK FVDS
Sbjct: 61  AHTILQLSFSIYHLLTQNIPLWNGLPQFNYYADQVITWVLATAAGAGFAVSAELKSFVDS 120

Query: 121 R--IDRELG-DYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRIK 180
              +++E G DYGFFSPQVDEQKSLID+FFDKA IATAILFLAFLSMATL+LLSPFNRIK
Sbjct: 121 HSTVEKEFGEDYGFFSPQVDEQKSLIDDFFDKANIATAILFLAFLSMATLILLSPFNRIK 180

Query: 181 PTPRPTQDLEAQKLEAQSSQAQSSQAQS 206
           PTP PTQDLEAQKLEAQS QAQS++  S
Sbjct: 181 PTPLPTQDLEAQKLEAQSPQAQSTEPPS 208

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BLAST of Clc04G13240 vs. NCBI nr
Match: XP_008454028.1 (PREDICTED: CASP-like protein 4D1 [Cucumis melo] >KAA0036037.1 CASP-like protein 4D1 [Cucumis melo var. makuwa] >TYJ98840.1 CASP-like protein 4D1 [Cucumis melo var. makuwa])

HSP 1 Score: 328.6 bits (841), Expect = 4.3e-86
Identity = 175/208 (84.13%), Postives = 193/208 (92.79%), Query Frame = 0


Query: 1   MDPKVVALIGVGLRIFIFLCLLIALVVIATDKLALIDGFKATFNDVQGYRYVLSVAIIGL 60
           MDPKV+ LIG+G+RIF+F+CLLIALVVIATDKL+LI+GFKATFNDV GYRYVLSVA IGL
Sbjct: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL 60

Query: 61  AHTILQLGFSIYHVITQNIPFWNGLPLFNYYADQVITWVLATAVGAGFAVTAELKRFVDS 120
           AHTILQLGFSIYHV+TQNI FWNGLP  NYYADQVITWVLATAVGAGFAV+ ELK +V+S
Sbjct: 61  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 120

Query: 121 RIDRELGD-YGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRIKPT 180
           RI++E GD YGFFS QVDEQKSLID+FFDKA IATAILFLAF+SMATLLLLSPFNRIKPT
Sbjct: 121 RINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPT 180

Query: 181 PRPTQDLEAQKLEAQSSQAQSSQAQSSQ 208
           P PTQD EAQKLEAQSSQAQ ++AQSS+
Sbjct: 181 PLPTQDPEAQKLEAQSSQAQQTEAQSSE 208

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BLAST of Clc04G13240 vs. NCBI nr
Match: XP_011649480.1 (CASP-like protein 4D2 [Cucumis sativus] >KGN63934.1 hypothetical protein Csa_014127 [Cucumis sativus])

HSP 1 Score: 322.4 bits (825), Expect = 3.1e-84
Identity = 168/209 (80.38%), Postives = 190/209 (90.91%), Query Frame = 0


Query: 1   MDPKVVALIGVGLRIFIFLCLLIALVVIATDKLALIDGFKATFNDVQGYRYVLSVAIIGL 60
           MDPKV+ALIG+GLRIF+F+CLLIALVVIATDKL+LI+GFKATFND+ GYRYVLSVA+IGL
Sbjct: 1   MDPKVLALIGIGLRIFVFICLLIALVVIATDKLSLINGFKATFNDIHGYRYVLSVAVIGL 60

Query: 61  AHTILQLGFSIYHVITQNIPFWNGLPLFNYYADQVITWVLATAVGAGFAVTAELKRFVDS 120
           AHTILQLGFSIYHV+TQNIPFWNGLP  NYYADQVITW+LAT VGAGFAV+ ELK +VDS
Sbjct: 61  AHTILQLGFSIYHVLTQNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDS 120

Query: 121 RIDRELG--DYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRIKP 180
           R  +E G  DYGFFSP ++EQKSLID+FF+KA +ATAILFLAF+SMATLLLLSPFNRIKP
Sbjct: 121 RTKKEFGDNDYGFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNRIKP 180

Query: 181 TPRPTQDLEAQKLEAQSSQAQSSQAQSSQ 208
           TP P QD EAQK EAQSSQ Q ++AQSS+
Sbjct: 181 TPLPAQDPEAQKSEAQSSQVQHTEAQSSE 209

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BLAST of Clc04G13240 vs. NCBI nr
Match: XP_022137163.1 (CASP-like protein 4D1 [Momordica charantia])

HSP 1 Score: 293.9 bits (751), Expect = 1.2e-75
Identity = 156/201 (77.61%), Postives = 170/201 (84.58%), Query Frame = 0


Query: 1   MDPKVVALIGVGLRIFIFLCLLIALVVIATDKLALIDGFKATFNDVQGYRYVLSVAIIGL 60
           MDPKVVA I +GLR F F+CLLIALVVIATDKLALIDG+KATFND+ GYRYVLS+AIIGL
Sbjct: 1   MDPKVVAFIVIGLRSFTFICLLIALVVIATDKLALIDGYKATFNDIHGYRYVLSIAIIGL 60

Query: 61  AHTILQLGFSIYHVITQNIPFWNGLPLFNYYADQVITWVLATAVGAGFAVTAELKRFVDS 120
           AHTILQLGFS+YHV+TQNIPFWNGLP FNYYADQV+ WVLA+A GAGFAVTAELKR VD 
Sbjct: 61  AHTILQLGFSLYHVLTQNIPFWNGLPQFNYYADQVLAWVLASAAGAGFAVTAELKRLVDE 120

Query: 121 RIDRELGDYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRIKPTP 180
            I   +GDY  F P VD+Q+SLID+FFDKA IATAILFLAFLSMATLLLLSPFNRIKP  
Sbjct: 121 NIKNAVGDYELFIPAVDQQESLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPLE 180

Query: 181 RPTQDLEAQKLEAQSSQAQSS 202
             TQD EAQ  E  +  A SS
Sbjct: 181 TTTQDPEAQAKEPTAPGAPSS 201

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BLAST of Clc04G13240 vs. NCBI nr
Match: XP_023524544.1 (CASP-like protein 4D1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 263.8 bits (673), Expect = 1.3e-66
Identity = 143/220 (65.00%), Postives = 175/220 (79.55%), Query Frame = 0


Query: 1   MDPKVVALIGVGLRIFIFLCLLIALVVIATDKLALIDGFKATFNDVQGYRYVLSVAIIGL 60
           MD  VVA IG+GLRIF F+CL IALVVIATDKL LIDG ++TFND+QGYRYVLSVAIIGL
Sbjct: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60

Query: 61  AHTILQLGFSIYHVITQNIPFWNGLPLFNYYADQVITWVLATAVGAGFAVTAELKRFVDS 120
            HTILQLGFSIY+ +T+NIPFWNGLP FNYY DQVI+WVL +A GAG AV+A+ K  ++ 
Sbjct: 61  VHTILQLGFSIYYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQ 120

Query: 121 RIDRELGDYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRIKPTP 180
            ++  +GD G     +D+QK L+D+FFD+A IA+AILFLAFLS+AT+LLLSPFNR+KP P
Sbjct: 121 VVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPIP 180

Query: 181 RPTQDLEAQKLEAQSSQAQSSQAQSSQAQPTEAHSPEPPS 221
             TQDLEA   +AQ  +AQS QA + +AQ  +AH+ E  S
Sbjct: 181 -TTQDLEAHSPQAQKCKAQSPQAHTVEAQSPQAHTVEAQS 219

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BLAST of Clc04G13240 vs. ExPASy Swiss-Prot
Match: C5Y494 (CASP-like protein 4D1 OS=Sorghum bicolor OX=4558 GN=Sb05g021340 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.0e-14
Identity = 62/174 (35.63%), Postives = 93/174 (53.45%), Query Frame = 0


Query: 13  LRIFIFLCLLIALVVIATDKLALIDG--FKATFNDVQGYRYVLSVAIIGLAHTILQLGFS 72
           LR+     L  +L +IA DKL +      + TF DV  YRYVL+VA+IG A+T+LQL  +
Sbjct: 15  LRLLSLGLLAASLALIAADKLNVDSDPPQRYTFRDVYAYRYVLAVAVIGCAYTLLQLPLA 74

Query: 73  IYHVIT-----QNIPFWNG-----LPLFNYYADQVITWVLATAVGAGFAVTAELKRFVDS 132
              +I      + I    G     L +    AD V   +LAT   AGFA T ++KR++D 
Sbjct: 75  AVSIIASGNNKRGIGAGGGSVAVALLVLVLLADVVFALLLATGAAAGFAFTYDVKRYLDG 134

Query: 133 RIDRELGDYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFN 175
           + D    D    +P+VD+    +D+FFD AY A  ++  A   MA +++LS ++
Sbjct: 135 QFD----DDSIGTPEVDKLHRDMDKFFDLAYAAAGLMLAAAACMALVIMLSVYS 184

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BLAST of Clc04G13240 vs. ExPASy Swiss-Prot
Match: D7LD60 (CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_903205 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.0e-13
Identity = 59/175 (33.71%), Postives = 94/175 (53.71%), Query Frame = 0


Query: 13  LRIFIFLCLLIALVVIATDKLAL---IDGFKATFNDVQGYRYVLSVAIIGLAHTILQLGF 72
           LR+     L+I +V+I+T+ + L       K  FNDV  YRY+LS A+IGL + ++QL  
Sbjct: 20  LRVLTAAFLVITVVLISTNTVTLEVSSTSIKMRFNDVYAYRYMLSAAVIGLLYAVVQLFL 79

Query: 73  SIYHVITQNIPFWNGLPLFNYYADQVITWVLATAVGAGFAVTAELKRFVDSRIDRELGDY 132
           +I    T      N    FN+Y D++I+++LAT   AGF V+ +LK    + I+ +  D 
Sbjct: 80  TISQFATGTTHPLN--YQFNFYGDKIISYLLATGSAAGFGVSKDLKETFLALIEFDSTD- 139

Query: 133 GFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRIKPTPRPTQ 185
                        +D+FF K Y + ++L  AF+S+A   +LS F+ +  + RP Q
Sbjct: 140 ------------PVDKFFSKGYASASLLLFAFVSLA---VLSVFSSLALSKRPIQ 176

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BLAST of Clc04G13240 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.3e-13
Identity = 56/174 (32.18%), Postives = 94/174 (54.02%), Query Frame = 0


Query: 4   KVVALIGVGLRIFIFLCLLIALVVIATDKLAL---IDGFKATFNDVQGYRYVLSVAIIGL 63
           ++ ALI   LRI  F+ L+ +LV++ T+   L   +   K  F DV  YRY+L+  +IGL
Sbjct: 11  RMAALI---LRILTFIFLIASLVILTTNTATLELDLVEVKVHFKDVYAYRYMLATIVIGL 70

Query: 64  AHTILQLGFSIYHVITQN-IPFWNGLPLFNYYADQVITWVLATAVGAGFAVTAELKRFVD 123
           A+T+LQ+ F++Y+V T N +   +G   F+++ D+VI+++L T   AGFA T ++K    
Sbjct: 71  AYTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIKPVFS 130

Query: 124 SRIDRELGDYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPF 174
                  GD+              D F +K Y + ++L + F+  A L + S +
Sbjct: 131 GS-----GDF--------------DAFINKGYASASLLLIGFVCTAVLSVFSSY 162

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BLAST of Clc04G13240 vs. ExPASy Swiss-Prot
Match: Q8GWD5 (CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.8e-13
Identity = 60/176 (34.09%), Postives = 94/176 (53.41%), Query Frame = 0


Query: 13  LRIFIFLCLLIALVVIATDKLAL---IDGFKATFNDVQGYRYVLSVAIIGLAHTILQLGF 72
           LR+     LLI +V+I+T+ + L       K  FNDV  YRY+LS A+IGL + ++QL  
Sbjct: 20  LRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAYRYMLSAAVIGLVYAVVQLFL 79

Query: 73  SIYHVITQNIPFWNGLPL---FNYYADQVITWVLATAVGAGFAVTAELKRFVDSRIDREL 132
           +I    T         PL   F++Y D+VI+++LAT   AGF V+ +LK    + I+ + 
Sbjct: 80  TISQFATGKTH-----PLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIEFDS 139

Query: 133 GDYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRIKPTPRP 183
            D              +D+FF K Y + ++L  AF+S+A   +LS F+ +  + RP
Sbjct: 140 TD-------------PVDKFFSKGYASASLLLFAFVSLA---VLSVFSSLALSKRP 174

[Close]

BLAST of Clc04G13240 vs. ExPASy Swiss-Prot
Match: Q56X75 (CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 8.5e-13
Identity = 57/178 (32.02%), Postives = 95/178 (53.37%), Query Frame = 0


Query: 4   KVVALIGVGLRIFIFLCLLIALVVIATDKLALI---DGFKATFNDVQGYRYVLSVAIIGL 63
           KV+ L+   LR+   + L+IAL++++T+ + ++      K  F DV  YRY+LS A+IGL
Sbjct: 14  KVLLLL---LRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGL 73

Query: 64  AHTILQLGFSIYHVIT-QNIPFWNGLPLFNYYADQVITWVLATAVGAGFAVTAELKRFVD 123
            + ++QL F+I    T    PF   L   ++Y D++I++++AT   AGF VT +LK    
Sbjct: 74  VYAVIQLFFTISEFATGVKNPFNYQL---DFYGDKLISYLVATGSAAGFGVTKDLKD--- 133

Query: 124 SRIDRELGDYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRIK 178
                      F +    +    +D+FF K Y + ++L  AF+ +A L + S F   K
Sbjct: 134 ----------TFLALVALDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAK 172

[Close]

BLAST of Clc04G13240 vs. ExPASy TrEMBL
Match: A0A5D3BGC2 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00320 PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 2.1e-86
Identity = 175/208 (84.13%), Postives = 193/208 (92.79%), Query Frame = 0


Query: 1   MDPKVVALIGVGLRIFIFLCLLIALVVIATDKLALIDGFKATFNDVQGYRYVLSVAIIGL 60
           MDPKV+ LIG+G+RIF+F+CLLIALVVIATDKL+LI+GFKATFNDV GYRYVLSVA IGL
Sbjct: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL 60

Query: 61  AHTILQLGFSIYHVITQNIPFWNGLPLFNYYADQVITWVLATAVGAGFAVTAELKRFVDS 120
           AHTILQLGFSIYHV+TQNI FWNGLP  NYYADQVITWVLATAVGAGFAV+ ELK +V+S
Sbjct: 61  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 120

Query: 121 RIDRELGD-YGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRIKPT 180
           RI++E GD YGFFS QVDEQKSLID+FFDKA IATAILFLAF+SMATLLLLSPFNRIKPT
Sbjct: 121 RINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPT 180

Query: 181 PRPTQDLEAQKLEAQSSQAQSSQAQSSQ 208
           P PTQD EAQKLEAQSSQAQ ++AQSS+
Sbjct: 181 PLPTQDPEAQKLEAQSSQAQQTEAQSSE 208

[Close]

BLAST of Clc04G13240 vs. ExPASy TrEMBL
Match: A0A1S3BYF7 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103494310 PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 2.1e-86
Identity = 175/208 (84.13%), Postives = 193/208 (92.79%), Query Frame = 0


Query: 1   MDPKVVALIGVGLRIFIFLCLLIALVVIATDKLALIDGFKATFNDVQGYRYVLSVAIIGL 60
           MDPKV+ LIG+G+RIF+F+CLLIALVVIATDKL+LI+GFKATFNDV GYRYVLSVA IGL
Sbjct: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL 60

Query: 61  AHTILQLGFSIYHVITQNIPFWNGLPLFNYYADQVITWVLATAVGAGFAVTAELKRFVDS 120
           AHTILQLGFSIYHV+TQNI FWNGLP  NYYADQVITWVLATAVGAGFAV+ ELK +V+S
Sbjct: 61  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 120

Query: 121 RIDRELGD-YGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRIKPT 180
           RI++E GD YGFFS QVDEQKSLID+FFDKA IATAILFLAF+SMATLLLLSPFNRIKPT
Sbjct: 121 RINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPT 180

Query: 181 PRPTQDLEAQKLEAQSSQAQSSQAQSSQ 208
           P PTQD EAQKLEAQSSQAQ ++AQSS+
Sbjct: 181 PLPTQDPEAQKLEAQSSQAQQTEAQSSE 208

[Close]

BLAST of Clc04G13240 vs. ExPASy TrEMBL
Match: A0A0A0LSG6 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G029610 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.5e-84
Identity = 168/209 (80.38%), Postives = 190/209 (90.91%), Query Frame = 0


Query: 1   MDPKVVALIGVGLRIFIFLCLLIALVVIATDKLALIDGFKATFNDVQGYRYVLSVAIIGL 60
           MDPKV+ALIG+GLRIF+F+CLLIALVVIATDKL+LI+GFKATFND+ GYRYVLSVA+IGL
Sbjct: 1   MDPKVLALIGIGLRIFVFICLLIALVVIATDKLSLINGFKATFNDIHGYRYVLSVAVIGL 60

Query: 61  AHTILQLGFSIYHVITQNIPFWNGLPLFNYYADQVITWVLATAVGAGFAVTAELKRFVDS 120
           AHTILQLGFSIYHV+TQNIPFWNGLP  NYYADQVITW+LAT VGAGFAV+ ELK +VDS
Sbjct: 61  AHTILQLGFSIYHVLTQNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDS 120

Query: 121 RIDRELG--DYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRIKP 180
           R  +E G  DYGFFSP ++EQKSLID+FF+KA +ATAILFLAF+SMATLLLLSPFNRIKP
Sbjct: 121 RTKKEFGDNDYGFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNRIKP 180

Query: 181 TPRPTQDLEAQKLEAQSSQAQSSQAQSSQ 208
           TP P QD EAQK EAQSSQ Q ++AQSS+
Sbjct: 181 TPLPAQDPEAQKSEAQSSQVQHTEAQSSE 209

[Close]

BLAST of Clc04G13240 vs. ExPASy TrEMBL
Match: A0A6J1C9J6 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111008706 PE=3 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 5.6e-76
Identity = 156/201 (77.61%), Postives = 170/201 (84.58%), Query Frame = 0


Query: 1   MDPKVVALIGVGLRIFIFLCLLIALVVIATDKLALIDGFKATFNDVQGYRYVLSVAIIGL 60
           MDPKVVA I +GLR F F+CLLIALVVIATDKLALIDG+KATFND+ GYRYVLS+AIIGL
Sbjct: 1   MDPKVVAFIVIGLRSFTFICLLIALVVIATDKLALIDGYKATFNDIHGYRYVLSIAIIGL 60

Query: 61  AHTILQLGFSIYHVITQNIPFWNGLPLFNYYADQVITWVLATAVGAGFAVTAELKRFVDS 120
           AHTILQLGFS+YHV+TQNIPFWNGLP FNYYADQV+ WVLA+A GAGFAVTAELKR VD 
Sbjct: 61  AHTILQLGFSLYHVLTQNIPFWNGLPQFNYYADQVLAWVLASAAGAGFAVTAELKRLVDE 120

Query: 121 RIDRELGDYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRIKPTP 180
            I   +GDY  F P VD+Q+SLID+FFDKA IATAILFLAFLSMATLLLLSPFNRIKP  
Sbjct: 121 NIKNAVGDYELFIPAVDQQESLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPLE 180

Query: 181 RPTQDLEAQKLEAQSSQAQSS 202
             TQD EAQ  E  +  A SS
Sbjct: 181 TTTQDPEAQAKEPTAPGAPSS 201

[Close]

BLAST of Clc04G13240 vs. ExPASy TrEMBL
Match: A0A6J1GBH8 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111452662 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 3.1e-66
Identity = 143/220 (65.00%), Postives = 177/220 (80.45%), Query Frame = 0


Query: 1   MDPKVVALIGVGLRIFIFLCLLIALVVIATDKLALIDGFKATFNDVQGYRYVLSVAIIGL 60
           M   VVA IG+GLRIF F+CLLIALVVIATDKL LI+G ++TFND+QGYRYVL+VAIIGL
Sbjct: 1   MGRMVVAFIGIGLRIFAFICLLIALVVIATDKLVLIEGSESTFNDIQGYRYVLAVAIIGL 60

Query: 61  AHTILQLGFSIYHVITQNIPFWNGLPLFNYYADQVITWVLATAVGAGFAVTAELKRFVDS 120
            HTILQLGFSIY+ +T+NIPFW GLP FNYY DQVI+WVLA+A GAG AV+A+ K  ++ 
Sbjct: 61  VHTILQLGFSIYYAVTKNIPFWKGLPQFNYYTDQVISWVLASAAGAGLAVSADRKMLLNE 120

Query: 121 RIDRELGDYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRIKPTP 180
            ++  +GD G     +D+QK L+D+FFD+A IA+AILFLAFLS+AT+LLLSPFNRI+P P
Sbjct: 121 VVETGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRIEPIP 180

Query: 181 RPTQDLEAQKLEAQSSQAQSSQAQSSQAQPTEAHSPEPPS 221
             TQDLEAQ  +AQ+ +AQS QAQ+ +AQ   AH+ E  S
Sbjct: 181 -TTQDLEAQSPQAQNGKAQSPQAQTVEAQSPHAHTVEAHS 219

[Close]

BLAST of Clc04G13240 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 76.6 bits (187), Expect = 2.7e-14
Identity = 60/176 (34.09%), Postives = 94/176 (53.41%), Query Frame = 0


Query: 13  LRIFIFLCLLIALVVIATDKLAL---IDGFKATFNDVQGYRYVLSVAIIGLAHTILQLGF 72
           LR+     LLI +V+I+T+ + L       K  FNDV  YRY+LS A+IGL + ++QL  
Sbjct: 20  LRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAYRYMLSAAVIGLVYAVVQLFL 79

Query: 73  SIYHVITQNIPFWNGLPL---FNYYADQVITWVLATAVGAGFAVTAELKRFVDSRIDREL 132
           +I    T         PL   F++Y D+VI+++LAT   AGF V+ +LK    + I+ + 
Sbjct: 80  TISQFATGKTH-----PLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIEFDS 139

Query: 133 GDYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRIKPTPRP 183
            D              +D+FF K Y + ++L  AF+S+A   +LS F+ +  + RP
Sbjct: 140 TD-------------PVDKFFSKGYASASLLLFAFVSLA---VLSVFSSLALSKRP 174

[Close]

BLAST of Clc04G13240 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 75.5 bits (184), Expect = 6.1e-14
Identity = 57/178 (32.02%), Postives = 95/178 (53.37%), Query Frame = 0


Query: 4   KVVALIGVGLRIFIFLCLLIALVVIATDKLALI---DGFKATFNDVQGYRYVLSVAIIGL 63
           KV+ L+   LR+   + L+IAL++++T+ + ++      K  F DV  YRY+LS A+IGL
Sbjct: 14  KVLLLL---LRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGL 73

Query: 64  AHTILQLGFSIYHVIT-QNIPFWNGLPLFNYYADQVITWVLATAVGAGFAVTAELKRFVD 123
            + ++QL F+I    T    PF   L   ++Y D++I++++AT   AGF VT +LK    
Sbjct: 74  VYAVIQLFFTISEFATGVKNPFNYQL---DFYGDKLISYLVATGSAAGFGVTKDLKD--- 133

Query: 124 SRIDRELGDYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRIK 178
                      F +    +    +D+FF K Y + ++L  AF+ +A L + S F   K
Sbjct: 134 ----------TFLALVALDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAK 172

The following BLAST results are available for this feature:

BLAST of Clc04G13240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894422.1	5.0e-87	86.06	CASP-like protein 4D1 [Benincasa hispida]	[more]
XP_008454028.1	4.3e-86	84.13	PREDICTED: CASP-like protein 4D1 [Cucumis melo] >KAA0036037.1 CASP-like protein ...	[more]
XP_011649480.1	3.1e-84	80.38	CASP-like protein 4D2 [Cucumis sativus] >KGN63934.1 hypothetical protein Csa_014...	[more]
XP_022137163.1	1.2e-75	77.61	CASP-like protein 4D1 [Momordica charantia]	[more]
XP_023524544.1	1.3e-66	65.00	CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc04G13240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C5Y494	2.0e-14	35.63	CASP-like protein 4D1 OS=Sorghum bicolor OX=4558 GN=Sb05g021340 PE=2 SV=1	[more]
D7LD60	1.0e-13	33.71	CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]
B9SXY8	1.3e-13	32.18	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]
Q8GWD5	3.8e-13	34.09	CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1	[more]
Q56X75	8.5e-13	32.02	CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1	[more]

BLAST of Clc04G13240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BGC2	2.1e-86	84.13	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00...	[more]
A0A1S3BYF7	2.1e-86	84.13	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103494310 PE=3 SV=1	[more]
A0A0A0LSG6	1.5e-84	80.38	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G029610 PE=3 SV=1	[more]
A0A6J1C9J6	5.6e-76	77.61	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111008706 PE=3 SV=1	[more]
A0A6J1GBH8	3.1e-66	65.00	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111452662 PE=3 SV=1	[more]

BLAST of Clc04G13240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39530.1	2.7e-14	34.09	Uncharacterised protein family (UPF0497)	[more]
AT2G39518.1	6.1e-14	32.02	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 6..128 e-value: 2.2E-17 score: 63.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..215
None	No IPR available	PANTHER	PTHR33573:SF17	CASP-LIKE PROTEIN 4D1	coord: 1..175
None	No IPR available	PANTHER	PTHR33573	CASP-LIKE PROTEIN 4A4	coord: 1..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc04G13240.1	Clc04G13240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane