
Clc04G12300 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGAAATGGGACATTTTATAGAATTTCAAATAGAATAGAGGTCTTCAAAGTTAAAACTTCTGTTTTTCTTACATCGATTAGTTATTGAAGTCGTTTTCCATCGACTAGATTTCGTATGAATCATCGTCTTCTTCTTTGCAGTTCCGATAATTTGCTTCAAATTTCCCTATTTCCTTCTCTCCCAATCCATCCATGCTTGATTCTTTTATGGGTCGCAGGATCTGAGTTCAGTAGATCGCAAACTTACCTAATTTCGCTGCTCCCAGAAATGGGGACGATTCTCCAAGCAGTTTACAGTGCCGCAGACCCTTTGTCGCCTATTGGGAGTTTTTCATCTCAGCCCAATGGGGACGACCGGGGACTCACTGCCGTCACTTCCTCCTCCGGTTGCCATGGAATGTGGTATAGTGCTCTATTGGTTGCGCCCTCGGTTTTGTTCGCCATCTATTTGGCGATTAGTGCCATCAAGAACATGAAGATGTATTTTCTTGGTCGGTCGTTTATAATGGTTTCGTATTATGCCCTTCTCTGGATCACTACGCTCCTAAATCTTGCTTGGTGCTCTCTTCAGGTGAGGTGGACTTTAACGATGTATAGTTTGCTTTGATTTAATGACTAATGAGCTCTCTTGCACGACGGTAATATAGGATTTGTGTGTCGGGTACCTGCACATAATAATTCGTTTTCAAACTCCTATTCATTTTGAGTTTATTCCTAAAGAGAGCCTAGTTGCATCCAACCGCAACAACTTGGTCTTCAAATCCTTGTTGATCCCATGGAAACCTGAAGACAAAGCTTCTGATCACCCCCTTCATTTAATATTTGGGATGGGCACTTTAAGAAGAGATAACCAGCAGTTACGACAACTTTAGTCTATTCTGCATCGAATATGCCTACTAGGGCTTGGGTACATAAAGAGGTTTTTAACAGTACTTATTCATTCATCATCATGGGAGTATTTTTTTGAAGTAAAGAACAAAGGATTCTAGAATCTAGACTCGTACTGCTTCCAACATGTCCTGCTGGTTTTAATGGTATTATGCTAAGCAGTCTTGAATCCGAACCAACCCCATGTTTTCAGACTTGGGGCTACATTTTGATATATTCTGAAGTTCATGAGATTGAGTCAGTGGCGGTGCTACTAGCACTTGCAAGTGCCTGTTATCAGAATTTGACATATTGCTTATCCAAGCCATAGCGTATCTTATATTTATTGTGATGTATTATCCCGGCAGTTTTAACTTTACATATCTTTTCCATTGGTTATTGATTTATGAGATGGATACTTTTCGTAAATTTGTACTGTTTTAATTCTTTGTAAGCAGGCATGGGAATGCTCCCCCGGGAAGAAGGTTCTTTGGAATCTTTTGTCATTGTTCACATCATCTGGAATGTTGTTTCTGGAAATCAGTCTATTAGCTTTCTTACTCAAAGAAAATTATTCGGGTGGGATGGAAGCATTGTTGCACAATTTTGTCATCTCCGGAATTTTAGTTGGTGTTGATGTGCTTCTTAAGGTAACATATGAATGTACTTTCAGGTTTGTGTGGTTGATTTTTCCCTTATTTGATAGCACAATCTGTGCAACTTTATAGCCTAGGGTCCCATAGTCGACTTTTTTCTAACAGTTATTGGTTGGCGACAGAGTTAGTTGTTTGACATTTCGGTTGTAATTTCTTGATTATGATTTTGTGTGGTAAAGGGTTCTTATTTGGATCATTTATAGAAAAGAAAATCAAAAGATTCTTGAGGGTGGTAGCCATATTGGGATGAATATATGGCTTCTAGATGGTGTATTCTTTTCCTTGTTTCGAACATTGTTACTACTATTTTTTCTTTTTCGGTTGCTAACTCAAGTGGTTCCTGTTGACTCCTTGATTCTTATTAACTCCGTTCGTGCTCTTCATATTTTCAATTAAAAGTTTAGTTTAGTTTTGTTCAGTTTTTGTTTTTTGTTTTATTTGTTTGTAATTTTCCACCCTTCCCGCTATGGTAATTGAACATCTACGTATTTACCAAATGAACTTCTGTTCAGGTCATATACGTGTTTGGATTTGGCATCCCACTGTTCATTGGGGTTGGTAGTTCACACTGGGCAAAGTGGGGTGTATGGACCATCCACAAGTTATTGCTAACCGCAGCATATGGCTACATATTGTTTGTTCACTTCTCAAAATGGAGAGATAAGCTACCACGTTAGCACATATTCATTTCTCAGTCGTTATTTCTATACCGATTTTCATCAAATTAACAGGGATTTGTTGTGTCTACAGCCAGACCATCATTCTACAATTACATCGCTGTGATGTTTGTTGTTAGCGCTTTAGCATTTTTTGCCAGCGGGCTTGCCGCGTTTGGAGTTAGGTTTGGCATCTGGTAATTGTACCTTCCTTTATTTATACTATCCAATGAGTTACTGTTCAGATTCTCTTCTCAATAATCTTAGGGTGTGTATGGAATGACTTTTCATCTTAGGGTGTGTTTGGAATACCTTTTCAAGTGTTTAATTTAAAACATAAATCATTTTGAATGAAATACAAATAAACGAAATCAGTCAAAATGGATTTTGAAAGCTATCAGTATATTTATTTTAAACACTTCATATTAAGAGTGTTTAAATGAAAATGAATTTTTGAAAAACATTTATTTTTTAAGTTATTCCAAATGGACCCTCAATCTCTGTGGAAGTTACAGAGATGGTGATTTTATGTTGTAGGTTGTACAATTTCACGGTTATCAGCTACCATTCCATGTATCTTCCTTTCCTCTACGTGACGTTTCTGGCAGATTTTTTCCAGGTGAACCCTTTGTGCATTGTAGCTGATACTTCTAAAATTCAATTTTTTGTTTTGTATCGTTTTGTTTTGTTTTGCTTTTTCAAACAAATACAGGGTTTGGGAAATTGAACCTCTTTAATTCTTATGTATTGACTCCAAAGGATAAAGAATTTTCATTTTTCAGGAGGAAGACTTCCTTTTGGAGAATGCGTACTATTCAGAAATGAGAGATGCAGGATTCTTTGATTCAGAGTGGGATTAGCCTCAACTCTTTACGGTTGAATGGTTGATGTTTACACACGATGTAAATAAACATAAACAGAAAATTCTCATTAGCAATAAAGCCTCATTCGATATTCTGAACCACTGATCTCTTCCAGTATTTTGAGCAAATTTGTCTGAGTTATTCTCCCCATAGTCTTTGAGGTTTGATTTTAAGATCGGGCAAAGTCACAGAACACCAGAATGGATGCACCACATTTGTGACTTGGGACACACCAACTAGGAGCAAACACACCATGGAGAATTGTTTTCTCGTATATGTTTTAACAATAAACTATGTTTCTTTTCTAAAAACAACAAATGCAATTCATCTTATTGATTACGGTACCGTCCTAAGGGGAAATGATATATAAGAAAACAATTGAACCAGTTGTGCAATGGCTGATGAAGAAACATTCCTTCTAACACCCCAGCGAACTTACTGTATTCATCATCTATGCATGTTCGTGTGTTCTTCATTATAACATATCTGGTAAAATGTTGCCGTTGATACTCATGTTACTCTCGCTCTTAATCTCGCTACCATTGTCCTTGACTATGGATTGTAAGGTCTTGTTTGTTTATTGCAATTCGCAGTTCCTCAATAATAAGAATAAGAATAAGAATAGATTTTGTG CCGAAATGGGACATTTTATAGAATTTCAAATAGAATAGAGGTCTTCAAAGTTAAAACTTCTGTTTTTCTTACATCGATTAGTTATTGAAGTCGTTTTCCATCGACTAGATTTCGTATGAATCATCGTCTTCTTCTTTGCAGTTCCGATAATTTGCTTCAAATTTCCCTATTTCCTTCTCTCCCAATCCATCCATGCTTGATTCTTTTATGGGTCGCAGGATCTGAGTTCAGTAGATCGCAAACTTACCTAATTTCGCTGCTCCCAGAAATGGGGACGATTCTCCAAGCAGTTTACAGTGCCGCAGACCCTTTGTCGCCTATTGGGAGTTTTTCATCTCAGCCCAATGGGGACGACCGGGGACTCACTGCCGTCACTTCCTCCTCCGGTTGCCATGGAATGTGGTATAGTGCTCTATTGGTTGCGCCCTCGGTTTTGTTCGCCATCTATTTGGCGATTAGTGCCATCAAGAACATGAAGATGTATTTTCTTGGTCGGTCGTTTATAATGGTTTCGTATTATGCCCTTCTCTGGATCACTACGCTCCTAAATCTTGCTTGGTGCTCTCTTCAGGCATGGGAATGCTCCCCCGGGAAGAAGGTTCTTTGGAATCTTTTGTCATTGTTCACATCATCTGGAATGTTGTTTCTGGAAATCAGTCTATTAGCTTTCTTACTCAAAGAAAATTATTCGGGTGGGATGGAAGCATTGTTGCACAATTTTGTCATCTCCGGAATTTTAGTTGGTGTTGATGTGCTTCTTAAGGTCATATACGTGTTTGGATTTGGCATCCCACTGTTCATTGGGGTTGGTAGTTCACACTGGGCAAAGTGGGGTGTATGGACCATCCACAAGTTATTGCTAACCGCAGCATATGGCTACATATTGTTTGTTCACTTCTCAAAATGGAGAGATAAGCTACCACCCAGACCATCATTCTACAATTACATCGCTGTGATGTTTGTTGTTAGCGCTTTAGCATTTTTTGCCAGCGGGCTTGCCGCGTTTGGAGTTAGGTTTGGCATCTGGTTGTACAATTTCACGGTTATCAGCTACCATTCCATGTATCTTCCTTTCCTCTACGTGACGTTTCTGGCAGATTTTTTCCAGGAGGAAGACTTCCTTTTGGAGAATGCGTACTATTCAGAAATGAGAGATGCAGGATTCTTTGATTCAGAGTGGGATTAGCCTCAACTCTTTACGGTTGAATGGTTGATGTTTACACACGATGTAAATAAACATAAACAGAAAATTCTCATTAGCAATAAAGCCTCATTCGATATTCTGAACCACTGATCTCTTCCAGTATTTTGAGCAAATTTGTCTGAGTTATTCTCCCCATAGTCTTTGAGGTTTGATTTTAAGATCGGGCAAAGTCACAGAACACCAGAATGGATGCACCACATTTGTGACTTGGGACACACCAACTAGGAGCAAACACACCATGGAGAATTGTTTTCTCGTATATGTTTTAACAATAAACTATGTTTCTTTTCTAAAAACAACAAATGCAATTCATCTTATTGATTACGGTACCGTCCTAAGGGGAAATGATATATAAGAAAACAATTGAACCAGTTGTGCAATGGCTGATGAAGAAACATTCCTTCTAACACCCCAGCGAACTTACTGTATTCATCATCTATGCATGTTCGTGTGTTCTTCATTATAACATATCTGGTAAAATGTTGCCGTTGATACTCATGTTACTCTCGCTCTTAATCTCGCTACCATTGTCCTTGACTATGGATTGTAAGGTCTTGTTTGTTTATTGCAATTCGCAGTTCCTCAATAATAAGAATAAGAATAAGAATAGATTTTGTG ATGAATCATCGTCTTCTTCTTTGCAGTTCCGATAATTTGCTTCAAATTTCCCTATTTCCTTCTCTCCCAATCCATCCATGCTTGATTCTTTTATGGGTCGCAGGATCTGAGTTCAGTAGATCGCAAACTTACCTAATTTCGCTGCTCCCAGAAATGGGGACGATTCTCCAAGCAGTTTACAGTGCCGCAGACCCTTTGTCGCCTATTGGGAGTTTTTCATCTCAGCCCAATGGGGACGACCGGGGACTCACTGCCGTCACTTCCTCCTCCGGTTGCCATGGAATGTGGTATAGTGCTCTATTGGTTGCGCCCTCGGTTTTGTTCGCCATCTATTTGGCGATTAGTGCCATCAAGAACATGAAGATGTATTTTCTTGGTCGGTCGTTTATAATGGTTTCGTATTATGCCCTTCTCTGGATCACTACGCTCCTAAATCTTGCTTGGTGCTCTCTTCAGGCATGGGAATGCTCCCCCGGGAAGAAGGTTCTTTGGAATCTTTTGTCATTGTTCACATCATCTGGAATGTTGTTTCTGGAAATCAGTCTATTAGCTTTCTTACTCAAAGAAAATTATTCGGGTGGGATGGAAGCATTGTTGCACAATTTTGTCATCTCCGGAATTTTAGTTGGTGTTGATGTGCTTCTTAAGGTCATATACGTGTTTGGATTTGGCATCCCACTGTTCATTGGGGTTGGTAGTTCACACTGGGCAAAGTGGGGTGTATGGACCATCCACAAGTTATTGCTAACCGCAGCATATGGCTACATATTGTTTGTTCACTTCTCAAAATGGAGAGATAAGCTACCACCCAGACCATCATTCTACAATTACATCGCTGTGATGTTTGTTGTTAGCGCTTTAGCATTTTTTGCCAGCGGGCTTGCCGCGTTTGGAGTTAGGTTTGGCATCTGGTTGTACAATTTCACGGTTATCAGCTACCATTCCATGTATCTTCCTTTCCTCTACGTGACGTTTCTGGCAGATTTTTTCCAGGAGGAAGACTTCCTTTTGGAGAATGCGTACTATTCAGAAATGAGAGATGCAGGATTCTTTGATTCAGAGTGGGATTAG MNHRLLLCSSDNLLQISLFPSLPIHPCLILLWVAGSEFSRSQTYLISLLPEMGTILQAVYSAADPLSPIGSFSSQPNGDDRGLTAVTSSSGCHGMWYSALLVAPSVLFAIYLAISAIKNMKMYFLGRSFIMVSYYALLWITTLLNLAWCSLQAWECSPGKKVLWNLLSLFTSSGMLFLEISLLAFLLKENYSGGMEALLHNFVISGILVGVDVLLKVIYVFGFGIPLFIGVGSSHWAKWGVWTIHKLLLTAAYGYILFVHFSKWRDKLPPRPSFYNYIAVMFVVSALAFFASGLAAFGVRFGIWLYNFTVISYHSMYLPFLYVTFLADFFQEEDFLLENAYYSEMRDAGFFDSEWD Homology
BLAST of Clc04G12300 vs. NCBI nr
Match: XP_004137428.1 (protein CANDIDATE G-PROTEIN COUPLED RECEPTOR 2 [Cucumis sativus] >KGN64044.1 hypothetical protein Csa_013150 [Cucumis sativus]) HSP 1 Score: 551.2 bits (1419), Expect = 6.5e-153 Identity = 278/305 (91.15%), Postives = 292/305 (95.74%), Query Frame = 0
BLAST of Clc04G12300 vs. NCBI nr
Match: XP_008448577.1 (PREDICTED: transmembrane protein adipocyte-associated 1 homolog [Cucumis melo]) HSP 1 Score: 550.4 bits (1417), Expect = 1.1e-152 Identity = 279/305 (91.48%), Postives = 290/305 (95.08%), Query Frame = 0
BLAST of Clc04G12300 vs. NCBI nr
Match: XP_038895861.1 (protein CANDIDATE G-PROTEIN COUPLED RECEPTOR 2-like [Benincasa hispida]) HSP 1 Score: 542.3 bits (1396), Expect = 3.0e-150 Identity = 273/305 (89.51%), Postives = 288/305 (94.43%), Query Frame = 0
BLAST of Clc04G12300 vs. NCBI nr
Match: TYJ98928.1 (transmembrane protein adipocyte-associated 1-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 542.3 bits (1396), Expect = 3.0e-150 Identity = 279/315 (88.57%), Postives = 290/315 (92.06%), Query Frame = 0
BLAST of Clc04G12300 vs. NCBI nr
Match: XP_023519639.1 (uncharacterized protein LOC111783005 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 531.2 bits (1367), Expect = 7.0e-147 Identity = 267/305 (87.54%), Postives = 281/305 (92.13%), Query Frame = 0
BLAST of Clc04G12300 vs. ExPASy Swiss-Prot
Match: Q94AH1 (Protein CANDIDATE G-PROTEIN COUPLED RECEPTOR 2 OS=Arabidopsis thaliana OX=3702 GN=CAND2 PE=1 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 9.0e-89 Identity = 157/266 (59.02%), Postives = 201/266 (75.56%), Query Frame = 0
BLAST of Clc04G12300 vs. ExPASy Swiss-Prot
Match: F4K2U8 (Protein CANDIDATE G-PROTEIN COUPLED RECEPTOR 8 OS=Arabidopsis thaliana OX=3702 GN=CAND8 PE=2 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 1.3e-84 Identity = 151/266 (56.77%), Postives = 196/266 (73.68%), Query Frame = 0
BLAST of Clc04G12300 vs. ExPASy TrEMBL
Match: A0A0A0LSU2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039110 PE=3 SV=1) HSP 1 Score: 551.2 bits (1419), Expect = 3.2e-153 Identity = 278/305 (91.15%), Postives = 292/305 (95.74%), Query Frame = 0
BLAST of Clc04G12300 vs. ExPASy TrEMBL
Match: A0A1S3BKM5 (transmembrane protein adipocyte-associated 1 homolog OS=Cucumis melo OX=3656 GN=LOC103490687 PE=3 SV=1) HSP 1 Score: 550.4 bits (1417), Expect = 5.4e-153 Identity = 279/305 (91.48%), Postives = 290/305 (95.08%), Query Frame = 0
BLAST of Clc04G12300 vs. ExPASy TrEMBL
Match: A0A5D3BL77 (Transmembrane protein adipocyte-associated 1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001280 PE=3 SV=1) HSP 1 Score: 542.3 bits (1396), Expect = 1.5e-150 Identity = 279/315 (88.57%), Postives = 290/315 (92.06%), Query Frame = 0
BLAST of Clc04G12300 vs. ExPASy TrEMBL
Match: A0A6J1EDV1 (uncharacterized protein LOC111431639 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431639 PE=3 SV=1) HSP 1 Score: 525.4 bits (1352), Expect = 1.9e-145 Identity = 265/305 (86.89%), Postives = 279/305 (91.48%), Query Frame = 0
BLAST of Clc04G12300 vs. ExPASy TrEMBL
Match: A0A6J1KKE1 (uncharacterized protein LOC111495382 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495382 PE=3 SV=1) HSP 1 Score: 518.8 bits (1335), Expect = 1.7e-143 Identity = 261/305 (85.57%), Postives = 276/305 (90.49%), Query Frame = 0
BLAST of Clc04G12300 vs. TAIR 10
Match: AT3G05010.1 (Protein of unknown function, transmembrane-40 ) HSP 1 Score: 328.6 bits (841), Expect = 6.4e-90 Identity = 157/266 (59.02%), Postives = 201/266 (75.56%), Query Frame = 0
BLAST of Clc04G12300 vs. TAIR 10
Match: AT5G27210.1 (Protein of unknown function, transmembrane-40 ) HSP 1 Score: 314.7 bits (805), Expect = 9.6e-86 Identity = 151/266 (56.77%), Postives = 196/266 (73.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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