Clc04G11620 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc04G11620
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	S-protein homolog
Location	ClcChr04: 25192517 .. 25196955 (+)
RNA-Seq Expression	Clc04G11620
Synteny	Clc04G11620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCCTCCAAACAAATTGTGCTTCATCTTATTGGTAGTTTTGGAATCAAACATGATTATTATGACATGTTTAGCACAATCCAAGGTACAACTTCCATTGTCCCCATGGCAAGTGAGCATTTTGAATGATTTGATGGATTCAACTTTGGTAGTTCATTGCAAGTCAAAAGACGATGATTTGGGAGAGCATGTGATAAGGTCAGGAGAAAAATACTATTGGATGTTTAAAGAAAATATTTGGCAAACTACATTATTTTGGTGTAATTTTAGAAGCAAATATGGGCAAGTTTCTGGTGACGTTTTCTGGCCAGAAAGCGGAAGTCGTCTTAGTGATCAATGTGAAGGTCATAACTGCGTTTGGTCTGCTCAAGAACATGGAATTTATTTTTATTTTGCTTCTGTTAAGAGCTATTATATAGCCTACCGTTGGAAATGATGTAACCCAACCTTCATTTGTGTACATGATTTCAACTCAATATAATTATTATCATAAAAATTAGTATAGCTCAACTATAATTAATTTACATGAATTGTCTTCTTATCTTCTACTCAATTTATTGTACTAAAAAAAACTCAATTCAATTGTCAAGATCCAAACATAAGTTGTATATAAACACTTGTTACAATTTTTTTAGATGAAAAGGTTCAATTCTTTCTTGTTTTTGATGGGCCAAAAGAGTATAATAAAATTTTAAAAATAAAAGTCGACGGCCCTAAGGCCATGAACTTTTATAATCTTTTTATAATATATTTTTGGGGTCGTTAAATGTTTAAATGTCATTAAACAAATTTTTTTATAATATATTATTTCTAAATTTAATCTGTAACGTCTCATATTAGATATATTCTTTTAGTATAATAATTGTGAAGATGATGAAATTTCAATTCTTATATTGTAAATAAATCTTACTTATTATTTTTTATATGAAATTCTTAATTAACCCAATAAAAAAAATTTATATTCGCAGATAAATTGTGTATTTTACTACTAGTTGTAAATATTTTCTATATATATTGGTTTAGTTGAGTTCAATGAATATTTGATTCATCCCTAGGGATGAAGTATATTAAAATATATATCATATTATTATTTGTTAAAATGTAGCTGAAATTAAACAATAGAATGATGGCATGAAATTTGATATATATATATATATAAAATAATGATATAGTGATGTCACATTTAAAAATATTATCATATATATTAACCAATATTCCTAATGTAAAACTATCAATTTGAAAATATAAATGATCCAATCTAAAGCTTACAAATCAATTGACAACTACTAAACAGAGTGATACAATAATGAATTTTCTTTTGTTGTTTTTATTGTTTGCTTTAATTGAAATGTTTCATTAACAACGTGATAACGTAATTATTGAATTAAATTCACTTTCAGTTTGAAATTTATCTCACCTATGTACGTTTTAAATTTTCATAAATTAAACATAATTACACATACAACGTATTGTATGTTTAATAAATCAGGTAAGAAAATTAAAGATGAATGTTTCCATATGGGAATTCAATTTGGCTATATATGAAACAAAACCCAAAATGGATTGTAAAGTGACCAAATCACACAATTCCAAAAGAAAAGAATGAATCCTCTAAACATATTATTATGTTTCATCTTATTATTTCGTACTTTTGAATCAAAGTCATGTTTTGCAGAATCCAAACTACAAGATAAATTGTCATCATGGCAAGTGACGATTTGGAACAATTTGAAGGATTCAAATCTAGTAGTTCATTGCAAGTCAAAAGACGACGATCTAGGCGAGCACGTGCTGAGCCCTAGAGGCAAATACTACTGGACGTTTAAAGAAAATTTTTGGCAAACCACATTGTTTTGGTGCAATTTTAATAGCAAACATGGACATGCTATTGGTAATGTTTTTTGGCCAGAATCTGATACCCTTCTCACTGATAATTGTGACAATAATGTTTGCAGTTGGGCTGCTGGAGAACTTGGTATTTACTTCCATTATCATACTCTCAAAACCTATAAATTAATGTATCCTTGGCAATGATCTAACCACACCCCACACCTTCATTACCATGATTATTTCAATGGTTCCAAACACACTTCTATGAATAAAAATATTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTATTGTTTTCTTTAGGTATAAGGTTCAATATTTATGTGGGAATTATGAGAGGAAAGTTCTACATTTGTTAGATAACTATACATCTCCTCCGATAATGTCTAATGACATGAGGTCTTTTAGAATGAAACGTAAAAGTAAAGTTAATGTGGGTTTATGCCAAAGTGGATAATAATAATAATTAATAGGTTAAAATATCATTTTGGTCCCTGTACTTTTTGTAAATCTTAAATTTAGTTCCTCGAAGTTAATTTTTATCGAAATTGATTAAATAAGCATAATAATTTTCATGTAAATTAAAAAAATACAATATGTGAATATGTTTTCAAAATTTATAGTGAAAATGTTAATAAAAAAATTAAAAATTAATGAAAAATAAAAAAATTAAAAATAAATTAGTAATAGGACTGAATTTAAGATTTATTGAAAGTACAAAGACTAAAATTGGACATCTGAAAGTATAAAGACTTATATTGAACAAATTCCAAAGTGTAGAGACTAATTTTAACCTGATTGAAATTTTACAATTAAACTCTTTAAATACTGCTAGAATAAAAAATCTCAAAATTATAGAACTACAATTTAACTCAATGTTTTTCTTATAAGTTTATATTTTAGGAAATTCCAAAACTTTTGAGTTAGATAAATAAATTTACCATTGTTGACCTGAGAAAATAATATAAAAAGTACAATAAAATATTAAAAATAAAAAACAATGACCATAGGTCATGAACTTTTATATTTCTTACAATATATCTTTGGGGCTGTAAAATTTTAAAATAAGTCATTAAAACAAATTTGTGTCTAATCCACGACAAGATATTTTAATTTATATTATTACCAAATTTAATTCATAATATCTCATATCTTATCTGTTTTGTTAGTATAACAATTGCAGAGACCAAAGAAATATCAAATTCTTATATTTATTCAATAAATTTTACTTTAATTTTAGATATGAAATTATTAATAAAAATTTAACCCAATAAAAAACTTTATTCTTCAAAACTACTTTGGGTAATTATCTAGATATCTTAACCTTCACTCTCCCCATTTTATTATTTTTATCGATATAAATAAAAAATATAGGCTCAGATTACTCACCTGAACTTAGCTTAGTGGTAATTAGTATAACCTAAGACGTTTGATCCTTATCTTCACAATTATTTTACTAAAAAAAAGAAAGAAAAAGAAAGAATAATCAATAAAGTACAATTACAATAATATTTTTATTATTATATGTTTTAGGAAAAAGCAAGAATAGAGTAAAATATAATAATGTTTTCAAAATATAAATTATCACTTGAGCGATAAAAACTGATAAATGTCTATCTAAGTCTATCACAAATAAAATGTAAAATTTATTATATTTATAAATATTTTCCTATTTAAAACAATTTTCATAGAATATATATATGTAATATATGTAGTGCATTGTGTAGTTGTTTGGTATTTGAAAACAAATACTTTTACGCTTATATATATCAATTCTTTTTTTAATCAACAATATTGTTGAAATTGAATAATGATAAAGGGATATGATTTTTAAAAATAATATACCTAATGTAAAAATATCCCCTAGAGTCCTATCCAATTCAACAAATCAATTGACACCGACTAATTGGCATTATTCATTAACAAAGTGGTAACATAATTAATGAATTAAATTCAGTTTTAGTTTGAAATTCATCTCACCGATGTACGTAACAACTTTCCCAAATATAATTCATGATTACACATACCATGTATTGTATGTTTAATAAATTAAGGTAAGGAAATTAAAGATTACATTTAGGAATTCAATTTGGCTATATATGAAACAAAACCCAAAATGGGTTGTAAAGTGACCAAATCACAGTTCCAAAAGAAAAGAATGAAGCCTCTAAAAATATTATTATGTTTCATCTTATTATTTCAATCAAAGTCATGTTTTGCACAATCCAAACTACAAGATCCATTGTCGTCATGGCAAGTGACGATTTGGAATCAGATGAATGATTCGAGTTTGGTAGTTCATTGCAAATCGAAAGACGACGATTTGGGCGAACACGAGTTGAGCCCTAGAAGCAAATACAACTGGACGTTTAAAGAAAATATTTGGCAAACCACACTGTTTTGGTGCAATTTTAGTAGCAAATATGGGCATGTTACTTGTAATGTTTTTTGGCCAGAATCTGAAACCTTTCTCACTGATAATTGTGACAACAATATTTGCAATTGGGCTGCTAAAGACCTTGGTATTTACTTCCATTATCATACTCTCAGAACCTATAAATTAGTGTACCCTTGGCAATGA

mRNA sequence

ATGAAGCCTCCAAACAAATTGTGCTTCATCTTATTGGTAGTTTTGGAATCAAACATGATTATTATGACATGTTTAGCACAATCCAAGGTACAACTTCCATTGTCCCCATGGCAAGTGAGCATTTTGAATGATTTGATGGATTCAACTTTGGTAGTTCATTGCAAGTCAAAAGACGATGATTTGGGAGAGCATGTGATAAGAAGCAAATATGGGCAAGTTTCTGGTGACGTTTTCTGGCCAGAAAGCGGAAGTCGTCTTAGTGATCAATGTGAAGAATCCAAACTACAAGATAAATTGTCATCATGGCAAGTGACGATTTGGAACAATTTGAAGGATTCAAATCTAGTAGTTCATTGCAAGTCAAAAGACGACGATCTAGGCGAGCACGTGCTGAGCCCTAGAGGCAAATACTACTGGACGTTTAAAGAAAATTTTTGGCAAACCACATTGTTTTGGTGCAATTTTAATAGCAAACATGGACATGCTATTGGTAATGTTTTTTGGCCAGAATCTGATACCCTTCTCACTGATAATTGTGACAATAATGTTTGCAGTTGGGCTGCTGGAGAACTTGATCCATTGTCGTCATGGCAAGTGACGATTTGGAATCAGATGAATGATTCGAGTTTGGTAGTTCATTGCAAATCGAAAGACGACGATTTGGGCGAACACGAGTTGAGCCCTAGAAGCAAATACAACTGGACGTTTAAAGAAAATATTTGGCAAACCACACTGTTTTGGTGCAATTTTAGTAGCAAATATGGGCATGTTACTTGTAATGTTTTTTGGCCAGAATCTGAAACCTTTCTCACTGATAATTGTGACAACAATATTTGCAATTGGGCTGCTAAAGACCTTGGTATTTACTTCCATTATCATACTCTCAGAACCTATAAATTAGTGTACCCTTGGCAATGA

Coding sequence (CDS)

ATGAAGCCTCCAAACAAATTGTGCTTCATCTTATTGGTAGTTTTGGAATCAAACATGATTATTATGACATGTTTAGCACAATCCAAGGTACAACTTCCATTGTCCCCATGGCAAGTGAGCATTTTGAATGATTTGATGGATTCAACTTTGGTAGTTCATTGCAAGTCAAAAGACGATGATTTGGGAGAGCATGTGATAAGAAGCAAATATGGGCAAGTTTCTGGTGACGTTTTCTGGCCAGAAAGCGGAAGTCGTCTTAGTGATCAATGTGAAGAATCCAAACTACAAGATAAATTGTCATCATGGCAAGTGACGATTTGGAACAATTTGAAGGATTCAAATCTAGTAGTTCATTGCAAGTCAAAAGACGACGATCTAGGCGAGCACGTGCTGAGCCCTAGAGGCAAATACTACTGGACGTTTAAAGAAAATTTTTGGCAAACCACATTGTTTTGGTGCAATTTTAATAGCAAACATGGACATGCTATTGGTAATGTTTTTTGGCCAGAATCTGATACCCTTCTCACTGATAATTGTGACAATAATGTTTGCAGTTGGGCTGCTGGAGAACTTGATCCATTGTCGTCATGGCAAGTGACGATTTGGAATCAGATGAATGATTCGAGTTTGGTAGTTCATTGCAAATCGAAAGACGACGATTTGGGCGAACACGAGTTGAGCCCTAGAAGCAAATACAACTGGACGTTTAAAGAAAATATTTGGCAAACCACACTGTTTTGGTGCAATTTTAGTAGCAAATATGGGCATGTTACTTGTAATGTTTTTTGGCCAGAATCTGAAACCTTTCTCACTGATAATTGTGACAACAATATTTGCAATTGGGCTGCTAAAGACCTTGGTATTTACTTCCATTATCATACTCTCAGAACCTATAAATTAGTGTACCCTTGGCAATGA

Protein sequence

MKPPNKLCFILLVVLESNMIIMTCLAQSKVQLPLSPWQVSILNDLMDSTLVVHCKSKDDDLGEHVIRSKYGQVSGDVFWPESGSRLSDQCEESKLQDKLSSWQVTIWNNLKDSNLVVHCKSKDDDLGEHVLSPRGKYYWTFKENFWQTTLFWCNFNSKHGHAIGNVFWPESDTLLTDNCDNNVCSWAAGELDPLSSWQVTIWNQMNDSSLVVHCKSKDDDLGEHELSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYFHYHTLRTYKLVYPWQ

Homology

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BLAST of Clc04G11620 vs. NCBI nr
Match: KAE8648119.1 (hypothetical protein Csa_004728 [Cucumis sativus])

HSP 1 Score: 169.5 bits (428), Expect = 4.6e-38
Identity = 89/224 (39.73%), Postives = 114/224 (50.89%), Query Frame = 0


Query: 92  ESKLQDKLSSWQVTIWNNL-KDSNLVVHCKSKDDDLGEHVLSPRGKYYWTFKENFWQTTL 151
           +SK    LS W V I N L  +  L VHCKSKDD+LG+HV+     Y W F+EN +QTTL
Sbjct: 31  DSKYAPALSKWTVVILNKLSSNQQLFVHCKSKDDNLGDHVVEAGQSYEWKFRENAFQTTL 90

Query: 152 FWCNFNSKHG-HAIGNVFWPESDTLLTDNCDNNVCSWAAGE-----------------LD 211
           FWC   +    H    V+W E    L   C+  +C W A +                   
Sbjct: 91  FWCTLRTPTNLHQTFEVYWREKGEWLRSRCNFKICMWYARDDGSITIQCSAFSMDSKYTP 150

Query: 212 PLSSWQVTIWNQM-NDSSLVVHCKSKDDDLGEHELSPRSKYNWTFKENIWQTTLFWCNF- 271
             S W V I N++ ++  L VHCKSKDD+LG+H +     Y W FKEN  +TTLFWC   
Sbjct: 151 SFSHWTVAIINELSSNQQLFVHCKSKDDNLGDHTVESGQTYQWQFKENALETTLFWCTLR 210

Query: 272 SSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYFHYHT 295
           + K  H T  VFW E   +L   C+   C W A+D G YF  +T
Sbjct: 211 TPKNLHHTFEVFWRERGEWLRSRCNFRACMWYARDDGFYFFLNT 254

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BLAST of Clc04G11620 vs. NCBI nr
Match: KAE8646229.1 (hypothetical protein Csa_016318 [Cucumis sativus])

HSP 1 Score: 159.5 bits (402), Expect = 4.7e-35
Identity = 89/266 (33.46%), Postives = 123/266 (46.24%), Query Frame = 0


Query: 98  KLSSWQVTIWNNLKDSNLVVHCKSKDDDLGEHVLSPRGKYY-WTFKENFWQTTLFWCNFN 157
           ++ SW V+I N L   +L VHC+SK+DDLG H L  RG  Y W FKENFW TTLFWC   
Sbjct: 20  QVPSWSVSIVNGLSHLDLNVHCQSKNDDLGNHHLVKRGDIYKWNFKENFWGTTLFWCKLE 79

Query: 158 SKHGHAIGNVFWPE--SDTLLTDNC-DNNVCSWAAGE----------------------- 217
               +     FWPE  S+T L D C     C W A +                       
Sbjct: 80  KSDAYVSFETFWPESWSNTWLRDRCGPEGTCIWVAKDGGIYLKNNPANRDEFVHKWWIGK 139

Query: 218 ----LDPLSSWQVT-------------------------IWNQMNDSSLVVHCKSKDDDL 277
                + +  W +T                         + N + +  +  HC+SKDDDL
Sbjct: 140 KMMMRNVVVLWLMTATLVAEAQISNKVVIRLPPVRYFIHVANDLTNQDMSAHCQSKDDDL 199

Query: 278 G-EHELSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPE-SETFLTDNC-DNNI 305
           G +H +    ++ W FKEN W+TTLFWC       +V+ +VFWPE    +L D C    +
Sbjct: 200 GIQHLVHRGDEFRWNFKENFWKTTLFWCRLEKSNAYVSFDVFWPERKHHWLRDRCGSRGV 259

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BLAST of Clc04G11620 vs. NCBI nr
Match: GAV64192.1 (Self-incomp_S1 domain-containing protein, partial [Cephalotus follicularis])

HSP 1 Score: 150.6 bits (379), Expect = 2.2e-32
Identity = 77/186 (41.40%), Postives = 103/186 (55.38%), Query Frame = 0


Query: 114 NLVVHCKSKDDDLGEHVLSPRGKYYWTFKENFWQTTLFWCNFNSKHGHAIGNVFWPESDT 173
           N+ +HCKSK+DDLG HV+S    Y W FK NFWQTTLF+C F ++ G  + +++    D 
Sbjct: 1   NVTIHCKSKNDDLGIHVISSGQSYGWGFKINFWQTTLFFCGFTTEKGRGVYDIYKASRDN 60

Query: 174 L--LTDNCDNNVCSW----------AAGELDPLSSWQVTIWNQMNDSSLVVHCKSKDDDL 233
           L  L D    N C W          AA     L+   V I N+M DS++ +HCKSKDDDL
Sbjct: 61  LRCLNDYGSGNTCFWDVEDDGVHGYAAIAQIALTKVHVGITNKM-DSNVTIHCKSKDDDL 120

Query: 234 GEHELSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNW 288
           G H LS    Y W F+ N+W+TTLF+C F++K G    N++    +      C  + C W
Sbjct: 121 GIHVLSSGQSYGWGFRVNLWETTLFFCGFTTKKGGGVYNIYQARRD---KTRCHGSTCLW 180

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BLAST of Clc04G11620 vs. NCBI nr
Match: XP_023542206.1 (S-protein homolog 74-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 149.8 bits (377), Expect = 3.7e-32
Identity = 63/115 (54.78%), Postives = 77/115 (66.96%), Query Frame = 0


Query: 191 LDPLSSWQVTIWNQMNDSSLVVHCKSKDDDLGEHELSPRSKYNWTFKENIWQTTLFWCNF 250
           +D  S+W+V I N + DS+LV HCKSK DDLGEH + P  KY W F EN+WQTTL+WCNF
Sbjct: 47  IDQFSNWEVDIVNDLKDSTLVAHCKSKSDDLGEHVIKPGDKYYWKFHENVWQTTLYWCNF 106

Query: 251 SSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYFHYHTLRTYKLVYPWQ 306
           SSK G  +  VFWPE   +L+D C+ N C W AKD GI         Y+LVYPW+
Sbjct: 107 SSKRGQASGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRIGVFGLYELVYPWK 161

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BLAST of Clc04G11620 vs. NCBI nr
Match: XP_023001658.1 (S-protein homolog 74-like [Cucurbita maxima])

HSP 1 Score: 149.1 bits (375), Expect = 6.4e-32
Identity = 64/113 (56.64%), Postives = 84/113 (74.34%), Query Frame = 0


Query: 193 PLSSWQVTIWNQMNDSSLVVHCKSKDDDLGEHELSPRSKYNWTFKENIWQTTLFWCNFSS 252
           P S WQVTI+N M DS+L+VHCKSKD+DLG HE+     Y   FKENIWQTT FWC+FSS
Sbjct: 36  PFSRWQVTIYNHMIDSTLMVHCKSKDNDLGRHEIKQGDNYFLKFKENIWQTTQFWCHFSS 95

Query: 253 KYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYFHYHTLRTYKLVYPWQ 306
           KYG VT +VFWPE  + L+D C+++ C W+A+D GI+    ++ +Y+L YPW+
Sbjct: 96  KYGQVTGDVFWPEEGSRLSDECNDHNCVWSAQDGGIFLLRGSINSYQLAYPWK 148

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BLAST of Clc04G11620 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.0e-17
Identity = 41/97 (42.27%), Postives = 57/97 (58.76%), Query Frame = 0


Query: 194 LSSWQVTIWNQM-NDSSLVVHCKSKDDDLGEHELSPRSKYNWTFKENIWQTTLFWCNFSS 253
           +S WQVT+ N +    +L +HCKSK+DDLGE  L  R++++W F EN+  +T FWC  + 
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 254 KYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIY 290
             GH+  NVFW   +  L   C    C W AK  G+Y
Sbjct: 98  DNGHMNVNVFW--DDVILFHRCGWKNCIWTAKTDGLY 132

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BLAST of Clc04G11620 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.9e-16
Identity = 40/97 (41.24%), Postives = 57/97 (58.76%), Query Frame = 0


Query: 194 LSSWQVTIWNQM-NDSSLVVHCKSKDDDLGEHELSPRSKYNWTFKENIWQTTLFWCNFSS 253
           +S WQVT+ N +    +L +HCKSK++DLG+  L    +++W F EN+  +TLFWC  S 
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 254 KYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIY 290
             GH+   VFW   +  L   CD   C W AK+ G+Y
Sbjct: 98  DDGHMNVKVFW--DDVILFHRCDWKNCVWTAKNDGLY 132

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BLAST of Clc04G11620 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.1e-09
Identity = 39/112 (34.82%), Postives = 57/112 (50.89%), Query Frame = 0


Query: 199 VTIWNQMNDSS---LVVHCKSKDDDLGEHELSPRSKYNWTFKENIWQTTLFWCNF----- 258
           +T+ N++N  +   L VHCKSK++D+G   L      +++FK N W TT FWCN      
Sbjct: 26  ITVKNELNPKNKNILKVHCKSKNNDIGVKYLKIGEVMSFSFKTNFWGTTEFWCNLYKGPD 85

Query: 259 SSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYFHYHTLRTYKLVY 303
             +Y  +T    +     F     D +  NW A+D GIYFH  +L +Y   Y
Sbjct: 86  YKRYRGITA---YQAIGLFAK---DGSSYNWLARDDGIYFHKDSLPSYYKTY 131

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BLAST of Clc04G11620 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 7.9e-09
Identity = 33/113 (29.20%), Postives = 57/113 (50.44%), Query Frame = 0


Query: 193 PLSSWQVTIWNQM-NDSSLVVHCKSKDDDLGEHELSPRSKYNWTFKENIWQTTLFWCNFS 252
           P S   V I N + N  +L+ HCKSKDDDLG   L P   ++++F    +  TL++C+FS
Sbjct: 44  PTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFS 103

Query: 253 SKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYFHYHTLRTYKLVYPW 305
                 + +++    ++   + C+++ C W  +  G        + + L YPW
Sbjct: 104 WPNESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

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BLAST of Clc04G11620 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-08
Identity = 27/76 (35.53%), Postives = 46/76 (60.53%), Query Frame = 0


Query: 104 VTIWNNLKDSNLVVHCKSKDDDLGEHVLSPRGKYYWTFKENFWQTTLFWCNFNSKHGHAI 163
           VT+ N +    L +HCKSK DDLG HV+  + +Y++ F+ N W++TLF+C+F        
Sbjct: 31  VTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQFKS 90

Query: 164 GNVFWPESDTLLTDNC 180
            +++  + D  + D+C
Sbjct: 91  FDIYDAQRDQGICDDC 106

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BLAST of Clc04G11620 vs. ExPASy TrEMBL
Match: A0A1Q3B8T3 (S-protein homolog (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_07710 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-32
Identity = 77/186 (41.40%), Postives = 103/186 (55.38%), Query Frame = 0


Query: 114 NLVVHCKSKDDDLGEHVLSPRGKYYWTFKENFWQTTLFWCNFNSKHGHAIGNVFWPESDT 173
           N+ +HCKSK+DDLG HV+S    Y W FK NFWQTTLF+C F ++ G  + +++    D 
Sbjct: 1   NVTIHCKSKNDDLGIHVISSGQSYGWGFKINFWQTTLFFCGFTTEKGRGVYDIYKASRDN 60

Query: 174 L--LTDNCDNNVCSW----------AAGELDPLSSWQVTIWNQMNDSSLVVHCKSKDDDL 233
           L  L D    N C W          AA     L+   V I N+M DS++ +HCKSKDDDL
Sbjct: 61  LRCLNDYGSGNTCFWDVEDDGVHGYAAIAQIALTKVHVGITNKM-DSNVTIHCKSKDDDL 120

Query: 234 GEHELSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNW 288
           G H LS    Y W F+ N+W+TTLF+C F++K G    N++    +      C  + C W
Sbjct: 121 GIHVLSSGQSYGWGFRVNLWETTLFFCGFTTKKGGGVYNIYQARRD---KTRCHGSTCLW 180

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BLAST of Clc04G11620 vs. ExPASy TrEMBL
Match: A0A6J1KR58 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111495733 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.1e-32
Identity = 64/113 (56.64%), Postives = 84/113 (74.34%), Query Frame = 0


Query: 193 PLSSWQVTIWNQMNDSSLVVHCKSKDDDLGEHELSPRSKYNWTFKENIWQTTLFWCNFSS 252
           P S WQVTI+N M DS+L+VHCKSKD+DLG HE+     Y   FKENIWQTT FWC+FSS
Sbjct: 36  PFSRWQVTIYNHMIDSTLMVHCKSKDNDLGRHEIKQGDNYFLKFKENIWQTTQFWCHFSS 95

Query: 253 KYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYFHYHTLRTYKLVYPWQ 306
           KYG VT +VFWPE  + L+D C+++ C W+A+D GI+    ++ +Y+L YPW+
Sbjct: 96  KYGQVTGDVFWPEEGSRLSDECNDHNCVWSAQDGGIFLLRGSINSYQLAYPWK 148

[Close]

BLAST of Clc04G11620 vs. ExPASy TrEMBL
Match: A0A6J1GSZ3 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456688 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.5e-31
Identity = 63/115 (54.78%), Postives = 77/115 (66.96%), Query Frame = 0


Query: 191 LDPLSSWQVTIWNQMNDSSLVVHCKSKDDDLGEHELSPRSKYNWTFKENIWQTTLFWCNF 250
           +D  S+W+V I N + DS+LV HCKSKDDDLGEH + P  KY W F EN+ QTTL+WCNF
Sbjct: 15  IDQFSNWEVDIVNDLKDSTLVAHCKSKDDDLGEHVIKPGDKYFWKFHENVLQTTLYWCNF 74

Query: 251 SSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYFHYHTLRTYKLVYPWQ 306
           SSK G  +  VFWPE   +L+D C+ N C W AKD GI         Y+LVYPW+
Sbjct: 75  SSKRGQASGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRLGVFGLYELVYPWK 129

[Close]

BLAST of Clc04G11620 vs. ExPASy TrEMBL
Match: A0A6J1GSD6 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456683 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 4.5e-31
Identity = 63/115 (54.78%), Postives = 77/115 (66.96%), Query Frame = 0


Query: 191 LDPLSSWQVTIWNQMNDSSLVVHCKSKDDDLGEHELSPRSKYNWTFKENIWQTTLFWCNF 250
           +D  S+W+V I N + DS+LVVHCKSKDDDLGEH +    KY W F EN+ QTTL+WCNF
Sbjct: 15  IDQFSNWEVDIVNDLKDSTLVVHCKSKDDDLGEHVIKAGDKYFWKFHENVLQTTLYWCNF 74

Query: 251 SSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYFHYHTLRTYKLVYPWQ 306
           SSK G  +  VFWPE   +L+D C+ N C W AKD GI         Y+LVYPW+
Sbjct: 75  SSKRGQASGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRLGAFGLYELVYPWK 129

[Close]

BLAST of Clc04G11620 vs. ExPASy TrEMBL
Match: A0A6J1GQZ0 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456686 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 4.5e-31
Identity = 63/115 (54.78%), Postives = 76/115 (66.09%), Query Frame = 0


Query: 191 LDPLSSWQVTIWNQMNDSSLVVHCKSKDDDLGEHELSPRSKYNWTFKENIWQTTLFWCNF 250
           +D  S+W+V I N + DS+LV HCKSKDDDLGEH + P  KY W F EN+ QTTL+WCNF
Sbjct: 15  IDQFSNWEVDIVNDLKDSTLVAHCKSKDDDLGEHVIKPGDKYFWKFHENVLQTTLYWCNF 74

Query: 251 SSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYFHYHTLRTYKLVYPWQ 306
           SSK G     VFWPE   +L+D C+ N C W AKD GI         Y+LVYPW+
Sbjct: 75  SSKGGQAFGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRLGVFGLYELVYPWK 129

[Close]

BLAST of Clc04G11620 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 89.7 bits (221), Expect = 4.3e-18
Identity = 41/97 (42.27%), Postives = 57/97 (58.76%), Query Frame = 0


Query: 194 LSSWQVTIWNQM-NDSSLVVHCKSKDDDLGEHELSPRSKYNWTFKENIWQTTLFWCNFSS 253
           +S WQVT+ N +    +L +HCKSK+DDLGE  L  R++++W F EN+  +T FWC  + 
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 254 KYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIY 290
             GH+  NVFW   +  L   C    C W AK  G+Y
Sbjct: 98  DNGHMNVNVFW--DDVILFHRCGWKNCIWTAKTDGLY 132

[Close]

BLAST of Clc04G11620 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 87.0 bits (214), Expect = 2.8e-17
Identity = 40/97 (41.24%), Postives = 57/97 (58.76%), Query Frame = 0


Query: 194 LSSWQVTIWNQM-NDSSLVVHCKSKDDDLGEHELSPRSKYNWTFKENIWQTTLFWCNFSS 253
           +S WQVT+ N +    +L +HCKSK++DLG+  L    +++W F EN+  +TLFWC  S 
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 254 KYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIY 290
             GH+   VFW   +  L   CD   C W AK+ G+Y
Sbjct: 98  DDGHMNVKVFW--DDVILFHRCDWKNCVWTAKNDGLY 132

[Close]

BLAST of Clc04G11620 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 69.7 bits (169), Expect = 4.6e-12
Identity = 40/115 (34.78%), Postives = 54/115 (46.96%), Query Frame = 0


Query: 183 VCSWAAGELDPLSSWQVTIWNQMNDSSLV-VHCKSKDDDLGEHELSPRSKYNWTFKENIW 242
           +C   +     +   +V + NQ+  S L+ VHC+SKDDDLGEH L     Y +TF +NIW
Sbjct: 13  LCIGVSNAFHEIGESKVVLSNQLEHSKLLKVHCRSKDDDLGEHILKIGQDYEFTFGDNIW 72

Query: 243 QTTLFWC------NFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYF 291
           QTT F C      NF      V     W ++            C W  ++ GIYF
Sbjct: 73  QTTSFSCQMDQGPNFKHHLDFVAYETSWSKAL--------EASCKWIGREDGIYF 119

[Close]

BLAST of Clc04G11620 vs. TAIR 10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-10
Identity = 39/112 (34.82%), Postives = 57/112 (50.89%), Query Frame = 0


Query: 199 VTIWNQMNDSS---LVVHCKSKDDDLGEHELSPRSKYNWTFKENIWQTTLFWCNF----- 258
           +T+ N++N  +   L VHCKSK++D+G   L      +++FK N W TT FWCN      
Sbjct: 26  ITVKNELNPKNKNILKVHCKSKNNDIGVKYLKIGEVMSFSFKTNFWGTTEFWCNLYKGPD 85

Query: 259 SSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYFHYHTLRTYKLVY 303
             +Y  +T    +     F     D +  NW A+D GIYFH  +L +Y   Y
Sbjct: 86  YKRYRGITA---YQAIGLFAK---DGSSYNWLARDDGIYFHKDSLPSYYKTY 131

[Close]

BLAST of Clc04G11620 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 62.8 bits (151), Expect = 5.6e-10
Identity = 33/113 (29.20%), Postives = 57/113 (50.44%), Query Frame = 0


Query: 193 PLSSWQVTIWNQM-NDSSLVVHCKSKDDDLGEHELSPRSKYNWTFKENIWQTTLFWCNFS 252
           P S   V I N + N  +L+ HCKSKDDDLG   L P   ++++F    +  TL++C+FS
Sbjct: 44  PTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFS 103

Query: 253 SKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYFHYHTLRTYKLVYPW 305
                 + +++    ++   + C+++ C W  +  G        + + L YPW
Sbjct: 104 WPNESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

The following BLAST results are available for this feature:

BLAST of Clc04G11620 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648119.1	4.6e-38	39.73	hypothetical protein Csa_004728 [Cucumis sativus]	[more]
KAE8646229.1	4.7e-35	33.46	hypothetical protein Csa_016318 [Cucumis sativus]	[more]
GAV64192.1	2.2e-32	41.40	Self-incomp_S1 domain-containing protein, partial [Cephalotus follicularis]	[more]
XP_023542206.1	3.7e-32	54.78	S-protein homolog 74-like [Cucurbita pepo subsp. pepo]	[more]
XP_023001658.1	6.4e-32	56.64	S-protein homolog 74-like [Cucurbita maxima]	[more]

BLAST of Clc04G11620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	6.0e-17	42.27	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	3.9e-16	41.24	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
Q9LW22	2.1e-09	34.82	S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1	[more]
F4JLQ5	7.9e-09	29.20	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
O23020	1.0e-08	35.53	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]

BLAST of Clc04G11620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1Q3B8T3	1.1e-32	41.40	S-protein homolog (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_07710...	[more]
A0A6J1KR58	3.1e-32	56.64	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111495733 PE=3 SV=1	[more]
A0A6J1GSZ3	1.5e-31	54.78	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456688 PE=3 SV=1	[more]
A0A6J1GSD6	4.5e-31	54.78	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456683 PE=3 SV=1	[more]
A0A6J1GQZ0	4.5e-31	54.78	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456686 PE=3 SV=1	[more]

BLAST of Clc04G11620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	4.3e-18	42.27	S-protein homologue 1	[more]
AT4G29035.1	2.8e-17	41.24	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	4.6e-12	34.78	Plant self-incompatibility protein S1 family	[more]
AT3G26880.1	1.5e-10	34.82	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	5.6e-10	29.20	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 198..304 e-value: 2.0E-24 score: 86.1 coord: 38..68 e-value: 1.4E-4 score: 22.4 coord: 103..190 e-value: 1.9E-19 score: 70.1
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 24..69 coord: 97..188
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 194..291
None	No IPR available	PANTHER	PTHR31232:SF34	PUTATIVE-RELATED	coord: 194..291
None	No IPR available	PANTHER	PTHR31232:SF34	PUTATIVE-RELATED	coord: 24..69 coord: 97..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc04G11620.2	Clc04G11620.2	mRNA