Clc04G11550 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc04G11550
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	cleavage stimulating factor 64
Location	ClcChr04: 25125763 .. 25128884 (-)
RNA-Seq Expression	Clc04G11550
Synteny	Clc04G11550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGAAAGCAAGTTTCCGGCGCCGGTCTGCCGGAGAGCATCGCAGGAATGTCGAAGAACCAACTATACGATATCATGTCTCAAATGAAGGTACTTCCCTTTTTCTTCTCGCTGTCAGATTCAATGTTGGTCCGCTTTTTGAATTCAGTTTTCGTATCCGAGCAATGTCTGGATACCGGAGGAATGATTAGTGTTGTGTTTGTTATTATGCAGACACTGATCGAACAGAATCAGCAGCAGGCGAAACAAATCCTCATCCAAAACCCGCTATTGACCAAAGCTCTTTTCCAGGTTTCAATTTTTAGGTTTTTCGTATCTTGAGCAATGTTCTTTTCATTTCCCTTTCAGAGCTTGCCTAAGTAATCTTGTATTGGCAGAGTTTTAACAACTAGGGTTTTACGTTTAAACGGATTTTGAATTATTGCTAGTACCTCGAGGAAATTGAATGTGTTTTAGTAATGTATGATTGTTGTGTGCACATTTGTGCAATCTTTTACAAGGTTTAATTTTAATATTTATGAACGTAACTGCTGGATCATTTTCTTGAATGAGTTGATTTATCTATTCCGGGTGAAATCAAGTAAGTTCGGATGCACCTCTCTATCTTTCCAAATTGCATTAAAGAACGTGTAGTGTTCTTGAAGACGTAGAAAACAGTCTGTAGCATGAGTGTTCTTCTTATTACCTCCTCCGAGACTCCATTGACTGTCAAATGCTTGTATGGCCTACATCAAGGGCCAAGTTTGAACACTAGACTACATTAGGCATTTGATTGTTCTGTTCAGAATAATTTGTAGCAACGCGGTGTGATTGCAAGTGTTATTTATTACAGTAATTTATGCTCTAGGGTACACTGAGTTATGTGATTAATAGTAAGGAGCCTTGTTACTAGTTGATCTGCACATTTAGAGGCCTTTTATTCCTCATTTGGTTACTGAAAATATTCTACTGTTTTATCGACCAGGCGCAAATCATGCTTGGGATGGTACGACCGCCTCAGGTAGCATGCCATTGTTATTCTGATTTTTTTTTTTTTTTTCCCTTCTGCATTTGGATCAGCTTATACCTATACATCTAAGTTATTCTTCTGTTTAGGTCCCAAGCATTCAGCCTTCAGCCTCACAACATTCTCAACCATCAACTCAGGCAACTCAACAATCAAATATTCAGCCTACTCAAACATCAGCTGCTCAAATAAGCGTGCAAGAACAGACAAGTGCACCACCTTTGGCCCCTCCTAGAAAACAATATCAGAACCAACCATCAATGCCTAACTCATCGACTACTCTTCCTACCGTGAACATTCAGCCTCGGTCAACACCTCTGATTCCCCTACAGACACCACAGCATCCCAAGGGTTTTGATATCCCCCAAGCAAGTCCCATTTCTGTCCCCCAACCCTCTCAAATTCCAAGTGTATCTCCAATTCTTCCATCTGCTGCTCAGCCACCTTTGCTTCATCAACCTCAGATTTCATCTGCCTCCATACAACTGCAGCAGCCATTACAAACAGCTGAAATTCACCACCTGCCGCCACAGGCACCATTGCCCCCACATTCTAGAGCACCTACAGGTCCAAATTTCCACCAGCACTACCCCCCTCAAATGGGCCACAATATGAATTACCAACCTCCTGGCATCCCACAGCATGTTTCACAACCCATGTTTCATGTAAGTAAGAGTTTTAGTTTTCATGCCACAGTTTTCCTTTGGATTTGCAGTACACAAATCTCCAGGTGAAAATGATCTCTCAACCTCTTTAGTCTATTTTTGAATGTTCTAGTCAGGTACCAAACTTCCTCCTGGCCTAGGAAATTCATTTCCTCAGGGACAGTCGGGACTACCTAGTCAGCCACCTCCTCAACCAATGTATCAGGTACCTTTTTTCCTTTTTTCTTTTTACTTGATTACAAAGTGTTTGTCCTGCACATACTAGATCAATTGAGTTCTTAGGAAGCTGATTAGTCCTGACATGAGCATGGGCTAATTTCTTTCAATTGGCTATGAGATGGATTTGTTGATATCTTGACCCAGTAAACTGTTGAGTGCAGTTTCAGCTTAATTTTTAATCATGATCCGTGCTGCATCCATATCTTGAGTCCTTGAATATGCCGGAGCCCGTCATTCACAATAATTTTGCTATAAATAATACCTTTTTTTTTTATAAAAATAATAATAAATATCCTAATGGTAAGGCAGTATTGGCTGGTGTAAATATTGTAATCACACCGTACACGTGGAATAGAATTGTAGGTTCTTGAGCATTCAAGTGGAATATTCCAATTGTTCATGTTTGCATTTGCCTGATATAGGCGTAGATATTTTTATCGGCTCTGCCTCTCTCTAAGGAGAAAGGGGTTTGGTATCCTTTGATCTTGCATTGTTCTGTATTGAGTTTCCATTTATGTCTTTGGTATGTGTTAGGTGTACGGAGGACTGAATTTTAACAACTCAAAAGTTTAATACGAGTGGCTTTTATTGTTTGATTATTTTCTGTTTCTGACATTGTACATGCTTCTGCCAACTATACTTCTAGTCATCATAAAGAATAGGGTTTGCATATGCAAGCAGGTATTGAGCATGCCATCTACTTTTAGATGAAATTATAAAGCCGTTGCAAACAATTTATCAAATAACCACATTATTAGCTGTTTAATATCTCTCGGTTGGTGCATATTTCTCTCAGGCTGGAGGTTCTAAATTAGGTACAGAATTCATGAATCAAGTTGGAACTTCAAAGCCTGCGGATAGAGGGCCTTGGATGTCTGGCCCTCCAGAAAATCCTACACTTCCACAGCAACTATCCGGACCACCACCAATACCATCAGTCCCTAGTCAGATGGGCCCTAATAATCAACCTCGTCCTGCACCACCGGTATGTTTCTAATGACTTTTTTCTGTTTGAAGTGATAAGTTCTCATTTTTCATCGTTTAAGATTGATTTTCTTTTTTTTTTTTTTTTTTGGTTACCCCTCCTCTGGTTTGCGGTTCAGTTGAGTCAGGAGATGGAGAAGATGTTACTTCAACAAGTCATGAGTCTCACACCAGAACAAATTAATCTTCTGCCTCCAGAGCAAAGAAATCAAGTGCTTCAACTACAGAAGATACTGCGCCAATGA

mRNA sequence

ATGGCCGGAAAGCAAGTTTCCGGCGCCGGTCTGCCGGAGAGCATCGCAGGAATGTCGAAGAACCAACTATACGATATCATGTCTCAAATGAAGGTACTTCCCTTTTTCTTCTCGCTGTCAGATTCAATGTTGGTCCGCTTTTTGAATTCAGTTTTCGTATCCGAGCAATGTCTGGATACCGGAGGAATGATTAGTGTTGTGTTTGTTATTATGCAGACACTGATCGAACAGAATCAGCAGCAGGCGAAACAAATCCTCATCCAAAACCCGCTATTGACCAAAGCTCTTTTCCAGGCGCAAATCATGCTTGGGATGGTACGACCGCCTCAGGTCCCAAGCATTCAGCCTTCAGCCTCACAACATTCTCAACCATCAACTCAGGCAACTCAACAATCAAATATTCAGCCTACTCAAACATCAGCTGCTCAAATAAGCGTGCAAGAACAGACAAGTGCACCACCTTTGGCCCCTCCTAGAAAACAATATCAGAACCAACCATCAATGCCTAACTCATCGACTACTCTTCCTACCGTGAACATTCAGCCTCGGTCAACACCTCTGATTCCCCTACAGACACCACAGCATCCCAAGGGTTTTGATATCCCCCAAGCAAGTCCCATTTCTGTCCCCCAACCCTCTCAAATTCCAAGTGTATCTCCAATTCTTCCATCTGCTGCTCAGCCACCTTTGCTTCATCAACCTCAGATTTCATCTGCCTCCATACAACTGCAGCAGCCATTACAAACAGCTGAAATTCACCACCTGCCGCCACAGGCACCATTGCCCCCACATTCTAGAGCACCTACAGGTCCAAATTTCCACCAGCACTACCCCCCTCAAATGGGCCACAATATGAATTACCAACCTCCTGGCATCCCACAGCATGTTTCACAACCCATGTTTCATTCAGGTACCAAACTTCCTCCTGGCCTAGGAAATTCATTTCCTCAGGGACAGTCGGGACTACCTAGTCAGCCACCTCCTCAACCAATGTATCAGGCAGTATTGGCTGGTGTAAATATTGTAATCACACCGTACACGTGGAATAGAATTGCTGGAGGTTCTAAATTAGGTACAGAATTCATGAATCAAGTTGGAACTTCAAAGCCTGCGGATAGAGGGCCTTGGATGTCTGGCCCTCCAGAAAATCCTACACTTCCACAGCAACTATCCGGACCACCACCAATACCATCAGTCCCTAGTCAGATGGGCCCTAATAATCAACCTCGTCCTGCACCACCGTTGAGTCAGGAGATGGAGAAGATGTTACTTCAACAAGTCATGAGTCTCACACCAGAACAAATTAATCTTCTGCCTCCAGAGCAAAGAAATCAAGTGCTTCAACTACAGAAGATACTGCGCCAATGA

Coding sequence (CDS)

ATGGCCGGAAAGCAAGTTTCCGGCGCCGGTCTGCCGGAGAGCATCGCAGGAATGTCGAAGAACCAACTATACGATATCATGTCTCAAATGAAGGTACTTCCCTTTTTCTTCTCGCTGTCAGATTCAATGTTGGTCCGCTTTTTGAATTCAGTTTTCGTATCCGAGCAATGTCTGGATACCGGAGGAATGATTAGTGTTGTGTTTGTTATTATGCAGACACTGATCGAACAGAATCAGCAGCAGGCGAAACAAATCCTCATCCAAAACCCGCTATTGACCAAAGCTCTTTTCCAGGCGCAAATCATGCTTGGGATGGTACGACCGCCTCAGGTCCCAAGCATTCAGCCTTCAGCCTCACAACATTCTCAACCATCAACTCAGGCAACTCAACAATCAAATATTCAGCCTACTCAAACATCAGCTGCTCAAATAAGCGTGCAAGAACAGACAAGTGCACCACCTTTGGCCCCTCCTAGAAAACAATATCAGAACCAACCATCAATGCCTAACTCATCGACTACTCTTCCTACCGTGAACATTCAGCCTCGGTCAACACCTCTGATTCCCCTACAGACACCACAGCATCCCAAGGGTTTTGATATCCCCCAAGCAAGTCCCATTTCTGTCCCCCAACCCTCTCAAATTCCAAGTGTATCTCCAATTCTTCCATCTGCTGCTCAGCCACCTTTGCTTCATCAACCTCAGATTTCATCTGCCTCCATACAACTGCAGCAGCCATTACAAACAGCTGAAATTCACCACCTGCCGCCACAGGCACCATTGCCCCCACATTCTAGAGCACCTACAGGTCCAAATTTCCACCAGCACTACCCCCCTCAAATGGGCCACAATATGAATTACCAACCTCCTGGCATCCCACAGCATGTTTCACAACCCATGTTTCATTCAGGTACCAAACTTCCTCCTGGCCTAGGAAATTCATTTCCTCAGGGACAGTCGGGACTACCTAGTCAGCCACCTCCTCAACCAATGTATCAGGCAGTATTGGCTGGTGTAAATATTGTAATCACACCGTACACGTGGAATAGAATTGCTGGAGGTTCTAAATTAGGTACAGAATTCATGAATCAAGTTGGAACTTCAAAGCCTGCGGATAGAGGGCCTTGGATGTCTGGCCCTCCAGAAAATCCTACACTTCCACAGCAACTATCCGGACCACCACCAATACCATCAGTCCCTAGTCAGATGGGCCCTAATAATCAACCTCGTCCTGCACCACCGTTGAGTCAGGAGATGGAGAAGATGTTACTTCAACAAGTCATGAGTCTCACACCAGAACAAATTAATCTTCTGCCTCCAGAGCAAAGAAATCAAGTGCTTCAACTACAGAAGATACTGCGCCAATGA

Protein sequence

MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKVLPFFFSLSDSMLVRFLNSVFVSEQCLDTGGMISVVFVIMQTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVPSIQPSASQHSQPSTQATQQSNIQPTQTSAAQISVQEQTSAPPLAPPRKQYQNQPSMPNSSTTLPTVNIQPRSTPLIPLQTPQHPKGFDIPQASPISVPQPSQIPSVSPILPSAAQPPLLHQPQISSASIQLQQPLQTAEIHHLPPQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPQPMYQAVLAGVNIVITPYTWNRIAGGSKLGTEFMNQVGTSKPADRGPWMSGPPENPTLPQQLSGPPPIPSVPSQMGPNNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ

Homology

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BLAST of Clc04G11550 vs. NCBI nr
Match: XP_008458086.1 (PREDICTED: extensin [Cucumis melo])

HSP 1 Score: 689.5 bits (1778), Expect = 2.0e-194
Identity = 381/457 (83.37%), Postives = 388/457 (84.90%), Query Frame = 0


Query: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKVLPFFFSLSDSMLVRFLNSVFVSEQCLDT 60
           MAGKQVSGAGLPESIAGMSKNQLYDIMSQMK                             
Sbjct: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMK----------------------------- 60

Query: 61  GGMISVVFVIMQTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVPSIQPSASQ 120
                       TLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVPSIQPSASQ
Sbjct: 61  ------------TLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVPSIQPSASQ 120

Query: 121 HSQPSTQATQQSNIQPTQTSAAQISVQEQTSAPPLAPPRKQYQNQPSMPNSSTTLPTVNI 180
           HSQPSTQATQQSN+QPTQTSA QIS+QEQTSAPPLAPPRKQYQNQPSMP SSTTLPT NI
Sbjct: 121 HSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPPRKQYQNQPSMPISSTTLPTANI 180

Query: 181 QPRSTPLIPLQTPQHPKGFDIPQASPISVPQPSQIPSVSPILPSAAQPPLLHQPQISSAS 240
           QPR TPLIPLQTPQHPKGFD+PQA+PISVPQPSQIPSVSPILPSAAQPPLLHQPQIS+AS
Sbjct: 181 QPRPTPLIPLQTPQHPKGFDVPQANPISVPQPSQIPSVSPILPSAAQPPLLHQPQISTAS 240

Query: 241 IQLQQPLQTAEIHHLPPQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPM 300
           +QLQQPLQTAE+HHLPPQAPLPPHSR PTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPM
Sbjct: 241 MQLQQPLQTAEVHHLPPQAPLPPHSRPPTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPM 300

Query: 301 FHSGTKLPPGLGNSFPQGQSGLPSQ-PPPQPMYQAVLAGVNIVITPYTWNRIAGGSKLGT 360
           FHSGTKLPPGLGNSFPQGQSGLPSQ PPPQ MYQ                  AGGSKLGT
Sbjct: 301 FHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQ------------------AGGSKLGT 360

Query: 361 EFMNQVGTSKPADRGPWMSGPPENPTLPQQLSGPPPIPSVP-SQMGPNNQPRPAPPLSQE 420
           EFMNQVGTSKPADRGPWM GPPENPTLPQQLSGPPPIPSVP  QMGPNNQPRPAPPLSQE
Sbjct: 361 EFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQE 398

Query: 421 MEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 456
           MEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 421 MEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 398

[Close]

BLAST of Clc04G11550 vs. NCBI nr
Match: XP_038894222.1 (cleavage stimulating factor 64 [Benincasa hispida])

HSP 1 Score: 688.7 bits (1776), Expect = 3.3e-194
Identity = 377/455 (82.86%), Postives = 387/455 (85.05%), Query Frame = 0


Query: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKVLPFFFSLSDSMLVRFLNSVFVSEQCLDT 60
           MAGKQVSGAGLPESIAGMSKNQLYDIMSQMK                             
Sbjct: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMK----------------------------- 60

Query: 61  GGMISVVFVIMQTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVPSIQPSASQ 120
                       TLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQ+PSIQPSASQ
Sbjct: 61  ------------TLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSIQPSASQ 120

Query: 121 HSQPSTQATQQSNIQPTQTSAAQISVQEQTSAPPLAPPRKQYQNQPSMPNSSTTLPTVNI 180
           HSQPSTQATQQSNIQPTQTSA QIS+QEQTSAP LAP RKQYQNQPSMP SSTTLPTVNI
Sbjct: 121 HSQPSTQATQQSNIQPTQTSAPQISLQEQTSAPSLAPSRKQYQNQPSMPISSTTLPTVNI 180

Query: 181 QPRSTPLIPLQTPQHPKGFDIPQASPISVPQPSQIPSVSPILPSAAQPPLLHQPQISSAS 240
           QPRSTPLIPLQTPQHPKGFDIPQ++PISVPQPSQIPSVSP+LPS+AQPPLLHQPQ+S+AS
Sbjct: 181 QPRSTPLIPLQTPQHPKGFDIPQSNPISVPQPSQIPSVSPMLPSSAQPPLLHQPQVSTAS 240

Query: 241 IQLQQPLQTAEIHHLPPQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPM 300
           +QLQQPLQTAEIHHLPPQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPM
Sbjct: 241 MQLQQPLQTAEIHHLPPQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPM 300

Query: 301 FHSGTKLPPGLGNSFPQGQSGLPSQPPPQPMYQAVLAGVNIVITPYTWNRIAGGSKLGTE 360
           FHSGTKLPPGLGNSF QGQSGLPSQPPPQ MYQ                  AGGSKLGTE
Sbjct: 301 FHSGTKLPPGLGNSFLQGQSGLPSQPPPQSMYQ------------------AGGSKLGTE 360

Query: 361 FMNQVGTSKPADRGPWMSGPPENPTLPQQLSGPPPIPSVPSQMGPNNQPRPAPPLSQEME 420
           FMNQVGTSKPADRGPWM GPPENPTLPQQLSGPPP+PSVP  MGPNNQPRPAPPLSQEME
Sbjct: 361 FMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPVPSVPGPMGPNNQPRPAPPLSQEME 396

Query: 421 KMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 456
           KMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 421 KMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396

[Close]

BLAST of Clc04G11550 vs. NCBI nr
Match: XP_011650532.1 (leucine-rich repeat extensin-like protein 5 [Cucumis sativus] >KGN64120.1 hypothetical protein Csa_013340 [Cucumis sativus])

HSP 1 Score: 684.1 bits (1764), Expect = 8.2e-193
Identity = 381/457 (83.37%), Postives = 386/457 (84.46%), Query Frame = 0


Query: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKVLPFFFSLSDSMLVRFLNSVFVSEQCLDT 60
           MAGKQVSGAGLPESIAGMSKNQLYDIMSQMK                             
Sbjct: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMK----------------------------- 60

Query: 61  GGMISVVFVIMQTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVPSIQPSASQ 120
                       TLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVPSIQPSASQ
Sbjct: 61  ------------TLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVPSIQPSASQ 120

Query: 121 HSQPSTQATQQSNIQPTQTSAAQISVQEQTSAPPLAPPRKQYQNQPSMPNSSTTLPTVNI 180
           HSQPSTQATQQSN+QPTQTSA QIS+QEQTSAPPLAP RKQYQNQPSMP SSTTLPT NI
Sbjct: 121 HSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPSRKQYQNQPSMPISSTTLPTANI 180

Query: 181 QPRSTPLIPLQTPQHPKGFDIPQASPISVPQPSQIPSVSPILPSAAQPPLLHQPQISSAS 240
           QPR TPLIPLQTPQHPKGFDIPQA+PISVPQPSQIPSVSPILPSAAQPPLLHQPQIS+AS
Sbjct: 181 QPRPTPLIPLQTPQHPKGFDIPQANPISVPQPSQIPSVSPILPSAAQPPLLHQPQISTAS 240

Query: 241 IQLQQPLQTAEIHHLPPQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPM 300
           +QLQQPLQTAEIHHLPPQA LPPHSR PTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPM
Sbjct: 241 MQLQQPLQTAEIHHLPPQAQLPPHSRPPTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPM 300

Query: 301 FHSGTKLPPGLGNSFPQGQSGLPSQ-PPPQPMYQAVLAGVNIVITPYTWNRIAGGSKLGT 360
           FHSGTKLPPGLGNSFPQGQSGLPSQ PPPQ MYQ                  AGGSKLGT
Sbjct: 301 FHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQ------------------AGGSKLGT 360

Query: 361 EFMNQVGTSKPADRGPWMSGPPENPTLPQQLSGPPPIPSVP-SQMGPNNQPRPAPPLSQE 420
           EFMNQVGTSKPADRGPWM GPPENPTLPQQLSGPPPIPSVP  QMGPNNQPRPAPPLSQE
Sbjct: 361 EFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQE 398

Query: 421 MEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 456
           MEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 421 MEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 398

[Close]

BLAST of Clc04G11550 vs. NCBI nr
Match: XP_023519984.1 (cleavage stimulating factor 64 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 650.6 bits (1677), Expect = 1.0e-182
Identity = 358/455 (78.68%), Postives = 372/455 (81.76%), Query Frame = 0


Query: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKVLPFFFSLSDSMLVRFLNSVFVSEQCLDT 60
           MAGKQV+G GLPESIAGMSKNQLY+IMSQMK                             
Sbjct: 1   MAGKQVTGTGLPESIAGMSKNQLYEIMSQMK----------------------------- 60

Query: 61  GGMISVVFVIMQTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVPSIQPSASQ 120
                       TLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQ+PS+ PSASQ
Sbjct: 61  ------------TLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVHPSASQ 120

Query: 121 HSQPSTQATQQSNIQPTQTSAAQISVQEQTSAPPLAPPRKQYQNQPSMPNSSTTLPTVNI 180
           HSQPST  TQQSNIQPTQTSAAQI++QEQTS PPLAPPRKQYQNQPSMP SSTTLPT NI
Sbjct: 121 HSQPSTHTTQQSNIQPTQTSAAQINLQEQTSTPPLAPPRKQYQNQPSMPVSSTTLPTTNI 180

Query: 181 QPRSTPLIPLQTPQHPKGFDIPQASPISVPQPSQIPSVSPILPSAAQPPLLHQPQISSAS 240
           QPRS PLIPLQTPQHPKGFD+PQA+P S PQPSQIP+V PILPSAAQPPLLHQPQIS+AS
Sbjct: 181 QPRSAPLIPLQTPQHPKGFDMPQANPNSAPQPSQIPNVPPILPSAAQPPLLHQPQISTAS 240

Query: 241 IQLQQPLQTAEIHHLPPQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPM 300
           IQLQQPLQTAEI HLPP APLP HSRAPTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQP+
Sbjct: 241 IQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPI 300

Query: 301 FHSGTKLPPGLGNSFPQGQSGLPSQPPPQPMYQAVLAGVNIVITPYTWNRIAGGSKLGTE 360
           FHSGTKLPPG+GNSFP GQS LPSQPPPQ MYQ                  AGGSKLGTE
Sbjct: 301 FHSGTKLPPGMGNSFPPGQSALPSQPPPQSMYQ------------------AGGSKLGTE 360

Query: 361 FMNQVGTSKPADRGPWMSGPPENPTLPQQLSGPPPIPSVPSQMGPNNQPRPAPPLSQEME 420
           FMNQVG+SKPADRGPWM GPPENPT PQQL+GPPPIPSV  QM P NQPR APPLSQEME
Sbjct: 361 FMNQVGSSKPADRGPWMPGPPENPTHPQQLAGPPPIPSVLGQMAPGNQPRAAPPLSQEME 396

Query: 421 KMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 456
           KMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 421 KMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396

[Close]

BLAST of Clc04G11550 vs. NCBI nr
Match: XP_022924107.1 (proline-rich protein 36-like [Cucurbita moschata])

HSP 1 Score: 650.6 bits (1677), Expect = 1.0e-182
Identity = 359/455 (78.90%), Postives = 371/455 (81.54%), Query Frame = 0


Query: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKVLPFFFSLSDSMLVRFLNSVFVSEQCLDT 60
           MAGKQV+G GLPESIAGMSKNQLYDIMSQMK                             
Sbjct: 1   MAGKQVTGTGLPESIAGMSKNQLYDIMSQMK----------------------------- 60

Query: 61  GGMISVVFVIMQTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVPSIQPSASQ 120
                       TLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQ+PS+ PSASQ
Sbjct: 61  ------------TLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVHPSASQ 120

Query: 121 HSQPSTQATQQSNIQPTQTSAAQISVQEQTSAPPLAPPRKQYQNQPSMPNSSTTLPTVNI 180
           HSQP T  TQQSNIQPTQTSAAQIS+QEQTS PPLAPPRKQYQNQPSMP SSTTLPT NI
Sbjct: 121 HSQPPTHTTQQSNIQPTQTSAAQISLQEQTSTPPLAPPRKQYQNQPSMPVSSTTLPTTNI 180

Query: 181 QPRSTPLIPLQTPQHPKGFDIPQASPISVPQPSQIPSVSPILPSAAQPPLLHQPQISSAS 240
           QPRS PLIPLQTPQHPKGFD+PQA+P S PQPSQIP+V PILPSAAQPPLLHQPQIS+AS
Sbjct: 181 QPRSAPLIPLQTPQHPKGFDMPQANPSSAPQPSQIPNVPPILPSAAQPPLLHQPQISTAS 240

Query: 241 IQLQQPLQTAEIHHLPPQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPM 300
           IQLQQPLQTAEI HLPP APLP HSRAPTGPNFHQHYPPQ+GHNMNYQPPGIPQHVSQP+
Sbjct: 241 IQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQIGHNMNYQPPGIPQHVSQPI 300

Query: 301 FHSGTKLPPGLGNSFPQGQSGLPSQPPPQPMYQAVLAGVNIVITPYTWNRIAGGSKLGTE 360
           FHSGTKLPPG+GNSFP GQS LPSQP PQ MYQ                  AGGSKLGTE
Sbjct: 301 FHSGTKLPPGMGNSFPPGQSALPSQPAPQSMYQ------------------AGGSKLGTE 360

Query: 361 FMNQVGTSKPADRGPWMSGPPENPTLPQQLSGPPPIPSVPSQMGPNNQPRPAPPLSQEME 420
           FMNQVG+SKPADRGPWM GPPENPT PQQLSGPPPIPSV  QMGP NQPR APPLSQEME
Sbjct: 361 FMNQVGSSKPADRGPWMPGPPENPTHPQQLSGPPPIPSVLGQMGPGNQPRAAPPLSQEME 396

Query: 421 KMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 456
           KMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 421 KMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396

[Close]

BLAST of Clc04G11550 vs. ExPASy TrEMBL
Match: A0A1S3C700 (extensin OS=Cucumis melo OX=3656 GN=LOC103497597 PE=4 SV=1)

HSP 1 Score: 689.5 bits (1778), Expect = 9.5e-195
Identity = 381/457 (83.37%), Postives = 388/457 (84.90%), Query Frame = 0


Query: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKVLPFFFSLSDSMLVRFLNSVFVSEQCLDT 60
           MAGKQVSGAGLPESIAGMSKNQLYDIMSQMK                             
Sbjct: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMK----------------------------- 60

Query: 61  GGMISVVFVIMQTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVPSIQPSASQ 120
                       TLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVPSIQPSASQ
Sbjct: 61  ------------TLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVPSIQPSASQ 120

Query: 121 HSQPSTQATQQSNIQPTQTSAAQISVQEQTSAPPLAPPRKQYQNQPSMPNSSTTLPTVNI 180
           HSQPSTQATQQSN+QPTQTSA QIS+QEQTSAPPLAPPRKQYQNQPSMP SSTTLPT NI
Sbjct: 121 HSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPPRKQYQNQPSMPISSTTLPTANI 180

Query: 181 QPRSTPLIPLQTPQHPKGFDIPQASPISVPQPSQIPSVSPILPSAAQPPLLHQPQISSAS 240
           QPR TPLIPLQTPQHPKGFD+PQA+PISVPQPSQIPSVSPILPSAAQPPLLHQPQIS+AS
Sbjct: 181 QPRPTPLIPLQTPQHPKGFDVPQANPISVPQPSQIPSVSPILPSAAQPPLLHQPQISTAS 240

Query: 241 IQLQQPLQTAEIHHLPPQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPM 300
           +QLQQPLQTAE+HHLPPQAPLPPHSR PTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPM
Sbjct: 241 MQLQQPLQTAEVHHLPPQAPLPPHSRPPTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPM 300

Query: 301 FHSGTKLPPGLGNSFPQGQSGLPSQ-PPPQPMYQAVLAGVNIVITPYTWNRIAGGSKLGT 360
           FHSGTKLPPGLGNSFPQGQSGLPSQ PPPQ MYQ                  AGGSKLGT
Sbjct: 301 FHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQ------------------AGGSKLGT 360

Query: 361 EFMNQVGTSKPADRGPWMSGPPENPTLPQQLSGPPPIPSVP-SQMGPNNQPRPAPPLSQE 420
           EFMNQVGTSKPADRGPWM GPPENPTLPQQLSGPPPIPSVP  QMGPNNQPRPAPPLSQE
Sbjct: 361 EFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQE 398

Query: 421 MEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 456
           MEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 421 MEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 398

[Close]

BLAST of Clc04G11550 vs. ExPASy TrEMBL
Match: A0A0A0LQD8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042320 PE=4 SV=1)

HSP 1 Score: 684.1 bits (1764), Expect = 4.0e-193
Identity = 381/457 (83.37%), Postives = 386/457 (84.46%), Query Frame = 0


Query: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKVLPFFFSLSDSMLVRFLNSVFVSEQCLDT 60
           MAGKQVSGAGLPESIAGMSKNQLYDIMSQMK                             
Sbjct: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMK----------------------------- 60

Query: 61  GGMISVVFVIMQTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVPSIQPSASQ 120
                       TLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVPSIQPSASQ
Sbjct: 61  ------------TLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVPSIQPSASQ 120

Query: 121 HSQPSTQATQQSNIQPTQTSAAQISVQEQTSAPPLAPPRKQYQNQPSMPNSSTTLPTVNI 180
           HSQPSTQATQQSN+QPTQTSA QIS+QEQTSAPPLAP RKQYQNQPSMP SSTTLPT NI
Sbjct: 121 HSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPSRKQYQNQPSMPISSTTLPTANI 180

Query: 181 QPRSTPLIPLQTPQHPKGFDIPQASPISVPQPSQIPSVSPILPSAAQPPLLHQPQISSAS 240
           QPR TPLIPLQTPQHPKGFDIPQA+PISVPQPSQIPSVSPILPSAAQPPLLHQPQIS+AS
Sbjct: 181 QPRPTPLIPLQTPQHPKGFDIPQANPISVPQPSQIPSVSPILPSAAQPPLLHQPQISTAS 240

Query: 241 IQLQQPLQTAEIHHLPPQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPM 300
           +QLQQPLQTAEIHHLPPQA LPPHSR PTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPM
Sbjct: 241 MQLQQPLQTAEIHHLPPQAQLPPHSRPPTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPM 300

Query: 301 FHSGTKLPPGLGNSFPQGQSGLPSQ-PPPQPMYQAVLAGVNIVITPYTWNRIAGGSKLGT 360
           FHSGTKLPPGLGNSFPQGQSGLPSQ PPPQ MYQ                  AGGSKLGT
Sbjct: 301 FHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQ------------------AGGSKLGT 360

Query: 361 EFMNQVGTSKPADRGPWMSGPPENPTLPQQLSGPPPIPSVP-SQMGPNNQPRPAPPLSQE 420
           EFMNQVGTSKPADRGPWM GPPENPTLPQQLSGPPPIPSVP  QMGPNNQPRPAPPLSQE
Sbjct: 361 EFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQE 398

Query: 421 MEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 456
           MEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 421 MEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 398

[Close]

BLAST of Clc04G11550 vs. ExPASy TrEMBL
Match: A0A6J1E818 (proline-rich protein 36-like OS=Cucurbita moschata OX=3662 GN=LOC111431641 PE=4 SV=1)

HSP 1 Score: 650.6 bits (1677), Expect = 4.9e-183
Identity = 359/455 (78.90%), Postives = 371/455 (81.54%), Query Frame = 0


Query: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKVLPFFFSLSDSMLVRFLNSVFVSEQCLDT 60
           MAGKQV+G GLPESIAGMSKNQLYDIMSQMK                             
Sbjct: 1   MAGKQVTGTGLPESIAGMSKNQLYDIMSQMK----------------------------- 60

Query: 61  GGMISVVFVIMQTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVPSIQPSASQ 120
                       TLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQ+PS+ PSASQ
Sbjct: 61  ------------TLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVHPSASQ 120

Query: 121 HSQPSTQATQQSNIQPTQTSAAQISVQEQTSAPPLAPPRKQYQNQPSMPNSSTTLPTVNI 180
           HSQP T  TQQSNIQPTQTSAAQIS+QEQTS PPLAPPRKQYQNQPSMP SSTTLPT NI
Sbjct: 121 HSQPPTHTTQQSNIQPTQTSAAQISLQEQTSTPPLAPPRKQYQNQPSMPVSSTTLPTTNI 180

Query: 181 QPRSTPLIPLQTPQHPKGFDIPQASPISVPQPSQIPSVSPILPSAAQPPLLHQPQISSAS 240
           QPRS PLIPLQTPQHPKGFD+PQA+P S PQPSQIP+V PILPSAAQPPLLHQPQIS+AS
Sbjct: 181 QPRSAPLIPLQTPQHPKGFDMPQANPSSAPQPSQIPNVPPILPSAAQPPLLHQPQISTAS 240

Query: 241 IQLQQPLQTAEIHHLPPQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPM 300
           IQLQQPLQTAEI HLPP APLP HSRAPTGPNFHQHYPPQ+GHNMNYQPPGIPQHVSQP+
Sbjct: 241 IQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQIGHNMNYQPPGIPQHVSQPI 300

Query: 301 FHSGTKLPPGLGNSFPQGQSGLPSQPPPQPMYQAVLAGVNIVITPYTWNRIAGGSKLGTE 360
           FHSGTKLPPG+GNSFP GQS LPSQP PQ MYQ                  AGGSKLGTE
Sbjct: 301 FHSGTKLPPGMGNSFPPGQSALPSQPAPQSMYQ------------------AGGSKLGTE 360

Query: 361 FMNQVGTSKPADRGPWMSGPPENPTLPQQLSGPPPIPSVPSQMGPNNQPRPAPPLSQEME 420
           FMNQVG+SKPADRGPWM GPPENPT PQQLSGPPPIPSV  QMGP NQPR APPLSQEME
Sbjct: 361 FMNQVGSSKPADRGPWMPGPPENPTHPQQLSGPPPIPSVLGQMGPGNQPRAAPPLSQEME 396

Query: 421 KMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 456
           KMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 421 KMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396

[Close]

BLAST of Clc04G11550 vs. ExPASy TrEMBL
Match: A0A6J1KF43 (cleavage stimulating factor 64 OS=Cucurbita maxima OX=3661 GN=LOC111495242 PE=4 SV=1)

HSP 1 Score: 647.5 bits (1669), Expect = 4.1e-182
Identity = 357/455 (78.46%), Postives = 370/455 (81.32%), Query Frame = 0


Query: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKVLPFFFSLSDSMLVRFLNSVFVSEQCLDT 60
           MAGKQV+G GLPESIAGMSKNQLY+IMSQMK                             
Sbjct: 1   MAGKQVTGTGLPESIAGMSKNQLYEIMSQMK----------------------------- 60

Query: 61  GGMISVVFVIMQTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVPSIQPSASQ 120
                       TLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQ+PS+ PSASQ
Sbjct: 61  ------------TLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVHPSASQ 120

Query: 121 HSQPSTQATQQSNIQPTQTSAAQISVQEQTSAPPLAPPRKQYQNQPSMPNSSTTLPTVNI 180
           HSQPST  TQQSNIQPTQTSAAQIS+QEQTS PPLAPPRKQYQNQPSMP SS+TLPT NI
Sbjct: 121 HSQPSTHTTQQSNIQPTQTSAAQISLQEQTSTPPLAPPRKQYQNQPSMPVSSSTLPTTNI 180

Query: 181 QPRSTPLIPLQTPQHPKGFDIPQASPISVPQPSQIPSVSPILPSAAQPPLLHQPQISSAS 240
           QPRS PLIPLQTPQHPKGFD+PQ +P S PQPSQIP+V PILPSAAQPPLLHQPQIS+AS
Sbjct: 181 QPRSAPLIPLQTPQHPKGFDMPQTNPSSAPQPSQIPNVPPILPSAAQPPLLHQPQISTAS 240

Query: 241 IQLQQPLQTAEIHHLPPQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPM 300
           IQLQQPLQTAEI HLPP APLP HSRAPTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQP+
Sbjct: 241 IQLQQPLQTAEISHLPPPAPLPSHSRAPTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPI 300

Query: 301 FHSGTKLPPGLGNSFPQGQSGLPSQPPPQPMYQAVLAGVNIVITPYTWNRIAGGSKLGTE 360
           FHSGTKLPPG+GNSF  GQS LPSQPPPQ MYQ                  AGGSKLGTE
Sbjct: 301 FHSGTKLPPGMGNSFAPGQSALPSQPPPQSMYQ------------------AGGSKLGTE 360

Query: 361 FMNQVGTSKPADRGPWMSGPPENPTLPQQLSGPPPIPSVPSQMGPNNQPRPAPPLSQEME 420
           FMNQV +SKPADRGPWM GPPENPT PQQLSGPPPIPSV  QMGP NQPR APPLSQEME
Sbjct: 361 FMNQVASSKPADRGPWMPGPPENPTHPQQLSGPPPIPSVLGQMGPGNQPRAAPPLSQEME 396

Query: 421 KMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 456
           KMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 421 KMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396

[Close]

BLAST of Clc04G11550 vs. ExPASy TrEMBL
Match: A0A6J1C742 (RNA-binding protein 33 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008603 PE=4 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 1.1e-179
Identity = 355/456 (77.85%), Postives = 371/456 (81.36%), Query Frame = 0


Query: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKVLPFFFSLSDSMLVRFLNSVFVSEQCLDT 60
           MAGKQV+G GLPESIAGMSKNQLYDIMSQMK                             
Sbjct: 1   MAGKQVAGTGLPESIAGMSKNQLYDIMSQMK----------------------------- 60

Query: 61  GGMISVVFVIMQTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVPSIQPSASQ 120
                       TLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQ+PSIQPS S 
Sbjct: 61  ------------TLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSIQPSTSH 120

Query: 121 HSQPSTQATQQSNIQPTQTSAAQISVQEQTSAPPLAPPRKQYQNQPSMPNSSTTLPTVNI 180
           HSQPST  T QSNIQPTQT A QIS+QEQT+APPLAPPRKQYQNQPSMP SSTTLPTVN+
Sbjct: 121 HSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRKQYQNQPSMPISSTTLPTVNV 180

Query: 181 QPRSTPLIPLQTPQHPKGFDIPQASPISVPQPSQIPSVSPILPSAAQPPLLHQPQISSAS 240
           QP+S PLIPLQTPQHPKGF++ QA+PISVPQPSQ+PSV P+LPSAAQPPLLHQPQIS+AS
Sbjct: 181 QPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS 240

Query: 241 IQLQQPLQTAEIHHLPPQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPM 300
           +QLQQPLQTAEI HLP QAPLPP SRAPTGPNFHQHYP Q+GHNMNYQP GIPQHVSQPM
Sbjct: 241 VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQVGHNMNYQPAGIPQHVSQPM 300

Query: 301 FHSGTKLPPGLGNSF-PQGQSGLPSQPPPQPMYQAVLAGVNIVITPYTWNRIAGGSKLGT 360
           FHSGTKLPPG+GNSF PQGQS +PSQPPPQ MYQ                  AGGSKLGT
Sbjct: 301 FHSGTKLPPGIGNSFPPQGQSAVPSQPPPQSMYQ------------------AGGSKLGT 360

Query: 361 EFMNQVGTSKPADRGPWMSGPPENPTLPQQLSGPPPIPSVPSQMGPNNQPRPAPPLSQEM 420
           EFMNQVGTSKPADRGPWM GPPENPTLPQQLSGPP  PSVP QMGP NQPRPAPPLSQEM
Sbjct: 361 EFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPP--PSVPGQMGPGNQPRPAPPLSQEM 395

Query: 421 EKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 456
           EKMLLQQVMSLTPEQINLLPPEQRNQV QLQKILRQ
Sbjct: 421 EKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ 395

[Close]

BLAST of Clc04G11550 vs. TAIR 10
Match: AT1G73840.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 214.9 bits (546), Expect = 1.3e-55
Identity = 200/470 (42.55%), Postives = 244/470 (51.91%), Query Frame = 0


Query: 1   MAGKQVSG-AGLPESIAGMSKNQLYDIMSQMKVLPFFFSLSDSMLVRFLNSVFVSEQCLD 60
           MAGKQ+ G  GLP ++AGM+K+QLYDIMSQMK                            
Sbjct: 1   MAGKQIGGDGGLPANLAGMTKSQLYDIMSQMK---------------------------- 60

Query: 61  TGGMISVVFVIMQTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQV-PSIQPSA 120
                        TLI+QN QQA++ILI+NPLLTKALFQAQIMLGMV+PPQV P ++P A
Sbjct: 61  -------------TLIDQNHQQAREILIRNPLLTKALFQAQIMLGMVQPPQVTPKVEPQA 120

Query: 121 SQHSQPSTQA-TQQSNIQPTQTS-AAQISVQEQTSA-PPLAPPRKQYQNQP---SMPNSS 180
            Q  Q S Q+   + N+Q   +S     SV E  +   P AP RK    QP     P  S
Sbjct: 121 VQQPQQSHQSIPPKPNVQAHMSSFQGGGSVHEPANTMQPQAPIRKHPTPQPMPMPPPPPS 180

Query: 181 TTLPTVNIQPRSTPLIPLQTPQHPKGFDIPQASPISVPQPSQIPSVSPIL---PSAAQPP 240
            +  +   QPR         PQ  +G   P  + +S PQ SQ+ +  P     P++ QPP
Sbjct: 181 VSANSAQSQPR------FSHPQR-QGHLNPAVTSMSHPQSSQVQNAPPPASHHPTSQQPP 240

Query: 241 LLHQPQISSASIQL-QQPLQTAEIHHLPPQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQ 300
             H   I ++S QL QQP+ +    H+  Q   P H         HQ+   Q G N  +Q
Sbjct: 241 -FHHLDIPASSTQLQQQPMHSGGGPHVAQQQSRPYH---------HQYGQAQTGPNTGFQ 300

Query: 301 PPGIP-QHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPQPMYQAVLAGVNIVITPYT 360
             G P QH+SQPM+HSG + P   G  FPQGQ  LPSQP  Q                  
Sbjct: 301 HHGAPTQHLSQPMYHSGNRPPASGGPQFPQGQPHLPSQPTYQ------------------ 360

Query: 361 WNRIAGGSKLGTEFMNQVGTSKPADRGP-WMSGPPENPTLPQQLSGPPPIPSVPSQMGPN 420
                GG   G    NQ+      DRGP WM+G  E+  +   L G  P+P  PSQ+GP 
Sbjct: 361 ----GGGQYRGDYNNNQLAGLMAQDRGPSWMAGQSESSNI-THLPGLGPVPP-PSQVGPG 388

Query: 421 NQPRPAP-PLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 456
             P P P P+S EMEK LLQQVMSLTPEQINLLPPEQRNQVLQLQ+ILRQ
Sbjct: 421 GGPPPRPAPISAEMEKALLQQVMSLTPEQINLLPPEQRNQVLQLQQILRQ 388

[Close]

BLAST of Clc04G11550 vs. TAIR 10
Match: AT1G71800.1 (cleavage stimulating factor 64 )

HSP 1 Score: 43.5 bits (101), Expect = 5.2e-04
Identity = 96/388 (24.74%), Postives = 145/388 (37.37%), Query Frame = 0


Query: 71  MQTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVPSIQPSASQHSQPSTQATQ 130
           ++ +  QN++ A+Q+L+  P L KA+F AQ+MLG+V P                  Q  Q
Sbjct: 186 IKLMATQNKEHARQLLVSRPQLLKAVFLAQVMLGIVSP------------------QVLQ 245

Query: 131 QSNIQPTQTSAAQISVQE-QTSAPPLAPPRKQYQNQPS-MPNSSTTLPTVNIQPRSTPLI 190
             NI    +     S+Q+ Q S   L PP  Q   Q S  P+S   +   + QP S    
Sbjct: 246 SPNIVQAPSHMTGSSIQDAQLSGQNLLPPLAQRSQQLSRAPHSQYPVQQSSKQPFS---- 305

Query: 191 PLQTPQHPKGFDIPQASPISVPQPSQIPSVSPILPSAAQPPLLHQPQISSASIQLQQPLQ 250
                       IPQ     V QP          PS+  PP   Q ++ +A  Q QQ + 
Sbjct: 306 -----------QIPQL----VAQPG---------PSSVNPPPRSQVKVENAPFQRQQVVP 365

Query: 251 TAEIHHLPPQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPP-GIPQHVSQPMFHSGTKL 310
            +                                 N+ Y     +P +  Q         
Sbjct: 366 AST--------------------------------NIGYSSQNSVPNNAIQ--------- 425

Query: 311 PPGLGNSFPQGQSGLPSQPPPQPMYQAVLAGVNIVITPYTWNRIAGGSKLGTEFMNQVGT 370
                          PSQ P Q +  +V+                GG  +   F  ++  
Sbjct: 426 ---------------PSQVPHQALPNSVMQ--------------QGGQTVSLNFGKRINE 454

Query: 371 SKPADRGPWMSGPPENPTLPQQLSGPPPIPSVPSQMGPNNQPRPAPPLSQEMEKMLLQQV 430
             P      M+ P +   +  + +   P   V + M PN    P   +S +++  LLQQV
Sbjct: 486 GPPHQS---MNRPSKMMKVEDRRTTSLPGGHVSNSMLPNQAQAPQTHISPDVQSTLLQQV 454

Query: 431 MSLTPEQINLLPPEQRNQVLQLQKILRQ 456
           M+LTPEQ+ LL PEQ+ +VL+LQ+ L+Q
Sbjct: 546 MNLTPEQLRLLTPEQQQEVLKLQQALKQ 454

The following BLAST results are available for this feature:

BLAST of Clc04G11550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458086.1	2.0e-194	83.37	PREDICTED: extensin [Cucumis melo]	[more]
XP_038894222.1	3.3e-194	82.86	cleavage stimulating factor 64 [Benincasa hispida]	[more]
XP_011650532.1	8.2e-193	83.37	leucine-rich repeat extensin-like protein 5 [Cucumis sativus] >KGN64120.1 hypoth...	[more]
XP_023519984.1	1.0e-182	78.68	cleavage stimulating factor 64 [Cucurbita pepo subsp. pepo]	[more]
XP_022924107.1	1.0e-182	78.90	proline-rich protein 36-like [Cucurbita moschata]	[more]

BLAST of Clc04G11550 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc04G11550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C700	9.5e-195	83.37	extensin OS=Cucumis melo OX=3656 GN=LOC103497597 PE=4 SV=1	[more]
A0A0A0LQD8	4.0e-193	83.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042320 PE=4 SV=1	[more]
A0A6J1E818	4.9e-183	78.90	proline-rich protein 36-like OS=Cucurbita moschata OX=3662 GN=LOC111431641 PE=4 ...	[more]
A0A6J1KF43	4.1e-182	78.46	cleavage stimulating factor 64 OS=Cucurbita maxima OX=3661 GN=LOC111495242 PE=4 ...	[more]
A0A6J1C742	1.1e-179	77.85	RNA-binding protein 33 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008603...	[more]

BLAST of Clc04G11550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73840.1	1.3e-55	42.55	hydroxyproline-rich glycoprotein family protein	[more]
AT1G71800.1	5.2e-04	24.74	cleavage stimulating factor 64	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038192	Transcription termination and cleavage factor, C-terminal domain superfamily	GENE3D	1.10.20.70		coord: 415..455 e-value: 2.6E-12 score: 47.9
IPR026896	Transcription termination and cleavage factor, C-terminal domain	PFAM	PF14304	CSTF_C	coord: 423..452 e-value: 5.7E-9 score: 35.5
IPR025742	Cleavage stimulation factor subunit 2, hinge domain	PFAM	PF14327	CSTF2_hinge	coord: 71..114 e-value: 1.0E-8 score: 35.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 297..329
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 380..412
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 364..417
None	No IPR available	PANTHER	PTHR47866	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN	coord: 70..455 coord: 1..33

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc04G11550.2	Clc04G11550.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031124	mRNA 3'-end processing
biological_process	GO:0035194	post-transcriptional gene silencing by RNA
biological_process	GO:0009749	response to glucose
cellular_component	GO:0005634	nucleus